sp|Q9LIC3|PP227_ARATH ----> Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial

Intron 1 GTAAGCTGCT ... GTTATTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	60	9	15	12
A2	90.91	1	4	16
A3	66.67	7	14	14
A4	67.74	5	10	11
A5	51.72	7	5	10
A6	-1	0	0	0
A7	-1	0	0	0
A8	-1	0	0	0
A9	-1	0	0	0
A10	44.44	10	7	9

>TRINITY_DN29176_c0_g2_i1 from sample A10 / Example spliced isoform

CTCTTTTGATTCAATCGCTCAACTTCGACGCTGCTTACCATTCCATTGCACATCGTAAGATTGAATTATGTTTTCAATACAGATACAAGCATCCCTTCAGAGTAACAAAACCACTTCGTTATAGGGGGGTGACAAAGCTAAGGAAAACCGATAGCAAAACCAGAAGGTAGCAAGAAAGCCAACGAGGAATTATATGGTTT
TCATTTATGTGACATTTTACTCCGAGTGTGCATCAATATGAAATCTCTCTCGGAGGGCAAAAGGGTTCACTCCCACATTGTCAAAAGCAATTTCAAGGAACACGTATTTTTCCAAAACAATCTTATTAATATGTATGGCAAATGTGGGAGTGTTGAGAATGCGCGCAAAGTGTTCGATAAAATGCATGAACGAAATGTCT
ATTCTTGGACGCTGATGATCGGCGAATATGTTCACCACGGACATTGTGAGGAAGCCCTGAAACTCTTTTCCCAATTGAAACAAGAACCAGGCATGGAGTTGAGTCAGTTCACTGTAGTTAGTGTGGTTCGGGCTTGTGCTAAAATAACAGGGTCACAATTTGGTAAGTTGGTTCATGCCCATGTAATAAAAACTGGGTTT
CAGTCAGAGGTAATCGTCGGAACCACCCTTGTTGATATGTA

>TRINITY_DN29176_c0_g2_i2 from sample A10 / Example unspliced isoform:

CTCTTTTGATTCAATCGCTCAACTTCGACGCTGCTTACCATTCCATTGCACATCGTAAGATTGAATTATGTTTTCAATACAGATACAAGCATCCCTTCAGAGTAACAAAACCACTTCGTTATAGGGGGGTGACAAAGCTgtaagctgcttctttcgtttatgtattgtttctacgtcaatgaagcatagaatccaattct
cgtgtgttattccagtaattcaacaacagtatacatgaacccattttccaaagtcggtggttctcaagtatgtaaccaaatgcgcttgtattgtgggtatcaatggcttactctttctacatctgttattgcagAAGGAAAACCGATAGCAAAACCAGAAGGTAGCAAGAAAGCCAACGAGGAATTATATGGTTTTCATT
TATGTGACATTTTACTCCGAGTGTGCATCAATATGAAATCTCTCTCGGAGGGCAAAAGGGTTCACTCCCACATTGTCAAAAGCAATTTCAAGGAACACGTATTTTTCCAAAACAATCTTATTAATATGTATGGCAAATGTGGGAGTGTTGAGAATGCGCGCAAAGTGTTCGATAAAATGCATGAACGAAATGTCTATTCT
TGGACGCTGATGATCGGCGAATATGTTCACCACGGACATTGTGAGGAAGCCCTGAAACTCTTTTCCCAATTGAAACAAGAACCAGGCATGGAGTTGAGTCAGTTCACTGTAGTTAGTGTGGTTCGGGCTTGTGCTAAAATAACAGGGTCACAATTTGGTAAGTTGGTTCATGCCCATGTAATAAAAACTGGGTTTCAGTC
AGAGGTAATCGTCGGAACCACCCTTGTTGATATGTA