sp|O81791|RKD5_ARATH ----> Protein RKD5
Intron 1 GTATGTAGCT ... TGTGTGGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 15.33 | 127 | 3.9 | 23 |
| A2 | 18.95 | 77 | 3.1 | 18 |
| A3 | 22.73 | 68 | 1.3 | 20 |
| A4 | 12.22 | 79 | 4.7 | 11 |
| A5 | 16.22 | 31 | 0.9 | 6 |
| A6 | 17.91 | 55 | 1.1 | 12 |
| A7 | 22.63 | 318 | 9.3 | 93 |
| A8 | 20.59 | 216 | 5.3 | 56 |
| A9 | 22.54 | 330 | 8.3 | 96 |
| A10 | 24.2 | 238 | 13.1 | 76 |
>TRINITY_DN40230_c0_g1_i4 from sample A8 / Example spliced isoformGAAATATTCATTCTTACACCACCTGCAATTTCTGGGTTGTAATGCTATGTTTAGCACACCACACACCAAAGCACAGGCAGACATCTGAGTAGCAGCAGCAAAAGTTGAATTAAAAGAATAGGTGCTCTCCATTATTATTACAAATGGAATGGGGATGGGGTTGGGGTTGGGTTTGCGCGTGGTTTTGCAGAGGCGTGGTA
AGATGGTGTATTTTCTTCCTCCTGCTGTTCAATATTCTTCTTCTGCACCGCAGTCTTTATGGCACGCGATGATGTGGCATCCCTCAATGCCTTTCCCTCTCCCCCGCCTATTTCTTTTTCTTTCTGCTGGACTAAATGTCATCAATCATTTTCAGCCTCATCATTTCCTTCGTTTTTCCTTCATTTCATGGCCATGGACT
CTTACTCGCGCTCCGAGAGCTCTCCTTCTCATCTCCATCTCCATCTCTGCGCTCTGGCAGTGTTTCAGAATCTGCTGAATGAAGAGCTTATAAAGAGCGTTCATCTGTATCAACTGCAAGATGGCACTATATCTGCTATTCAACGAGAGTTCATGTTTTTCCCTAGCTCATATAAGCAGATAGGCCTCGAAAATATTCCT
CCTGTTCATGTTTGTGGCAAGGAGAACGTACACGAGTTCATGGCGAATCTACAGGAAGGAGAAGAGCGCGGGCTTTGGATTTGTATTCTCCATTATAACTGCAATCTCAGGCCTATCAACTTCACAATTCCCAATATTCTCAACCTAGCCAGGAATCCTGCACTGAAAACCATACCAGAGCTAGCAATTGATCTCGATCG
CGTTGCGAGATTCAAACAAGCGTTAGACTCTTCTCACCCTCAGAAATATTTGGGCGAGAAAATGTTAAACTATGAATTAACTGACATGCAGTCCAATTTTCTTGGCATTGAGGGTTTCTGGCTTGCTATTCCTGGCTTAACAACCGTGCAGGACTGTATTGACGATACACTCAGTAGACCCTCTGTTATTGAAAGCCCTC
TGAGCCTCGATCAGATCGATAACTCTTATAGCATCAGGAACATCTGCAATAAAGATAGCCCTAACCCTAACCCTGGGCAACAAATCACCCCTTACCTAAAAGGGTGTTCATCTTGTAACCCAAATGAAGTAAGATCAATTATAGGCAATAATTCAAGATGCCTCGAAAGGGACAATCACACTGCTGATCAGAAATCAAGT
CCAAGTATAGTAGACATGGCAGTCATACAGTCAATCGAACACAGCCATGCACCACAGAATCTGAAAAATGATGCCTCTGAGGATCCATCAATGTTATGCAGTAAGAAAACTAATGAGGAGCTTCCCAGTGGTGCTGGTGTAAAAGGTAAGAAGAGGAGGGCATCAAGTGAGGAGAAGGATGAGAATAGGCAAATCCACCG
ATCACCCACCCAGCGCGTTGCCAACATTGCACTGAAGGATCTTGCAAAATATTTTGATGTGCCGATCACTGAAGCTTCAAGGAGTTTGAAGGTAGGGCTTACAGTCTTGAAAAGGAAATGTAGAGAATTTGGCATCCCTCGCTGGCCGCACAGGAAAATCAAGTCCCTTGACAGTCTCATACAGGATGTACAGGAAGAAG
CCAAGAGACAGGAGAGAGAAGATAAAGCTGCAGCTATGGCAGCAATGAAAAGAACAAGGATATTGGAAACCGAGAGACAAAAGATTGAGAAGAAACCTGGAATAGACATCAAAAAAGACACTAAGAGATTTCGACAGGACATATTTAAGAGAAGGCACAAGGCAAGAGCTATTAAAAAGAAAATTTGAGCAAATAAATTC
TGGCAGCTTCCACAGTTTATTGCTGACACAGTTGATGCAGGACTACATGCACTCTTTTAGAGGCCTGGTGCAGATATGGTACTTCATCAACTTGTTACCAAAGAGACTTGACCTATGAAGATATGAGAGGTTAAATTTCAAATGGTTGGTGATAAGTCAGTTTGGCTATTGATAATCAAATGTTTGTAACCGCTAGAAAG
TTTCTAAGTGATCAATGCAAGGCAAGAAGTCTATTTCTGGTTGCCCAAATCCACAGAAAACATGTATATGGACAAGATATCCATCAAGTGATTAATCGATATAACTATAACATTGAAGTACCCACAAAATACAGATTCAATTCTGAATTATTTTATATTTATAGGTTCTTTTTACCTTTCTGGCATTTCTTATCTCAACC
TTCTCCTCCCTTTTGCATGCTCCCCTTTTAGCCCAATGTTTCTCCCTTTCCAGTAGGTTGGTTAATGGGAGACTTGTAGTGACATTTATTTTAGGTCTTGGTCTACTAACTGACCAATGGTGAGGTTCATAACTTCATCTTTCACTAATCGTCCGAAGTGCACTTGATATTTAGCCAGTGGCTTGCAAGATTTGCAAATT
TTTTAGAGTAAGTAACAGTAAAGCATAGCTAGCAAAATGGGTGTGCCAAAGGTCCAAAGCAGATAGCCCACCCACAAAGTAAACAGAGGCTAATCACTCTTATCATTTGCACCTGTAATATAGATGTTAACACCCTGAGCCTATCTAATACTGTCCTCTTGGTGAGAGGCCCAAGACAATGGGGCCCTAGTGGATAAACC
CTGGTGGCCTCAAAACCCTCTAATTGGCTTGAGAAAGGTGTCAAAG
>TRINITY_DN40230_c0_g1_i1 from sample A8 / Example unspliced isoform:CAACACATCACCCCTTACCTAAAAGgtatgtagctattattttccctttgcttgtatttttctctttaattttctcttatgaattcacgtcttgagcataacctgccagcagagatcaaattagaggattcaaaccattttagtttataaagggcagagacacctgacattagtacttcaaatgtctggttattgacctt
aaaattgtagtggctcagcatcacatacgaggataatgcttgcatctattttatttgtgtggtagGGTGTTCATCTTGTAACCCAAATGAAGTAAGATCAATTATAGGCAATAATTCAAGATGCCTCGAAAGGGACAATCACACTGCTGATCAGAAATCAAGTCCAAGTATAGTAGACATGGCAGTCATACAGTCAATCG
AACACAGCCATGCACCACAGAATCTGAAAAATGATGCCTCTGAGGATCCATCAATGTTATGCAGTAAGAAAACTAATGAGGAGCTTCCCAGTGGTGCTGGTGTAAAAGGTAAGAAGAGGAGGGCATCAAGTGAGGAGAAGGATGAGAATAGGCAAATCCACCGATCACCCACCCAGCGCGTTGCCAACATTGCACTGAAG
GATCTTGCAAAATATTTTGATGTGCCGATCACTGAAGCTTCAAGGAGTTTGAAGGTAGGGCTTACAGTCTTGAAAAGGAAATGTAGAGAATTTGGCATCCCTCGCTGGCCGCACAGGAAAATCAAGTCCCTTGACAGTCTCATACAGGATGTACAGGAAGAAGCCAAGAGACAGGAGAGAGAAGATAAAGCTGCAGCTAT
GGCAGCAATGAAAAGAACAAGGATATTGGAAACCGAGAGACAAAAGATTGAGAAGAAACCTGGAATAGACATCAAAAAAGACACTAAGAGATTTCGACAGGACATATTTAAGAGAAGGCACAAGGCAAGAGCTATTAAAAAGAAGTATGAATTCTCAAACTCAAACTCAGAAAACGGAGATCGATCAGAAGAAGTTCCAT
CAGTTTCCACCATTCTATCATTGATGATAGATAAGACTAGAATTTCTCCATCAACCAATTAATTATCTGTATCTATCTTTTGTTTTTTGCTACAGAATTTGAGCAAATAAATTCTGGCAGCTTCCACAGTTTATTGCTGACACAGTTGATGCAGGACTACATGCACTCTTTTAGAGGCCTGGTGCAGATATGGTACTTCA
TCAACTTGTTACCAAAGAGACTTGACCTATGAAGATATGAGAGGTTAAATTTCAAATGGTTGGTGATAAGTCAGTTTGGCTATTGATAATCAAATGTTTGTAACCGCTAGAAAGTTTCTAAGTGATCAATGCAAGGCAAGAAGTCTATTTCTGGTTGCCCAAATCCACAGAAAACATGTATATGGACAAGATATCCATCA
AGTGATTAATCGATATAACTATAACATTGAAGTACCCACAAAATACAGATTCAATTCTGAATTATTTTATATTTATAGGTTCTTTTTACCTTTCTGGCATTTCTTATCTCAACCTTCTCCTCCCTTTTGCATGCTCCCCTTTTAGCCCAATGTTTCTCCCTTTCCAGTAGGTTGGTTAATGGGAGACTTGTAGTGACATT
TATTTTAGGTCTTGGTCTACTAACTGACCAATGGTGAGGTTCATAACTTCATCTTTCACTAATCGTCCGAAGTGCACTTGATATTTAGCCAGTGGCTTGCAAGATTTGCAAATTTTTTAGAGTAAGTAACAGTAAAGCATAGCTAGCAAAATGGGTGTGCCAAAGGTCCAAAGCAGATAGCCCACCCACAAAGTAAACAG
AGGCTAATCACTCTTATCATTTGCACCTGTAATATAGATGTTAACACCCTGAGCCTATCTAATACTGTCCTCTTGGTGAGAGGCCCAAGACAATGGGGCCCTAGTGGATAAACCCTGGTGGCCTCAAAACCCTCTAATTGGCTTGAGAAAGGTGTCAAAG
Intron 2 GTATGAATTC ... TTTGCTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 71.55 | 68 | 206 | 136 |
| A2 | 71.21 | 37 | 122 | 61 |
| A3 | 74.93 | 34.8 | 139 | 69 |
| A4 | 56.35 | 55 | 87 | 55 |
| A5 | 69.91 | 17 | 38 | 41 |
| A6 | 68.68 | 57 | 132 | 118 |
| A7 | 72.69 | 185.6 | 628 | 360 |
| A8 | 73.18 | 237.8 | 708.6 | 589 |
| A9 | 71.1 | 226.6 | 669 | 446.2 |
| A10 | 72.15 | 210.6 | 700 | 391 |
>TRINITY_DN114863_c0_g1_i4 from sample A1 / Example spliced isoformCAAAAGTTGAATTAAAAGAATAGGTGCTCTCCATTATTATTACAAATGGAATGGGGATGGGGTTGGGGTTGGGTTTGCGCGTGGTTTTGCAGAGGCGTGGTAAGATGGTGTATTTTCTTCCTCCTGCTGTTCAATATTCTTCTTCTGCACCGCAGTCTTTATGGCACGCGATGATGTGGCATCCCTCAATGCCTTTCCCT
CTCCCCCGCCTATTTCTTTTTCTTTCTGCTGGACTAAATGTCATCAATCATTTTCAGCCTCATCATTTCCTTCGTTTTTCCTTCATTTCATGGCCATGGACTCTTACTCGCGCTCCGAGAGCTCTCCTTCTCATCTCCATCTCCATCTCTGCGCTCTGGCAGTGTTTCAGAATCTGCTGAATGAAGAGCTTATAAAGGGC
GTTCATCTGTATCAACTGCAAGATGGCACTATATCTGCTATTCAACGAGAGTTCATGTTTTTCCCTAGCTCATATAAGCAGATAGGCCTCGAAAATATTCCTCCTGTTCATGTTTGTGGCAAGGAGAACGTACACGAGTTCATGTTTTTCCCTAGCTCATATAAGCAGATAGGCCTCGAAAATATTCCTCCTGTTCATGT
TTGTGGCAAGGAGAACGTACACGAGTTCATGGCGAATCTACAGGAAGGAGAAGAGCGCGGGCTTTGGATTTGTATTCTCCATTATAACTGCAATCTCAGGCCTATCAACTTCACAATTCCCAATATTCTCAACCTAGCCAGGAATCCTGCACTGAAAACCATACCAGAGCTAGCAATTGATCTCGATCGCGTTGCGAGAT
TCAAACAAGCGTTAGACTCTTCTCACCCTCAGAAATATTTGGGCGAGAAAATGTTAAACTATGAATTAACTGACATGCAGTCCAATTTTCTTGGCATTGAGGGTTTCTGGCTTGCTATTCCTGGCTTAACAACCGTGCAGGACTGTATTGACGATACACTCAGTAGACCCTCTGTTATTGAAAGCCCTCTGAGCCTCGAT
CAGATCGATAACTCTTATAGCATCAGGAACATCTGCAATAAAGATAGCCCTAACCCTAACCCTGGGCAACAAATCACCCCTTACCTAAAAGGGTGTTCATCTTGTAACCCAAATGAAGTAAGATCAATTATAGGCAATAATTCAAGATGCCTCGAAAGGGACAATCACACTGCTGATCAGAAATCAAGTCCAAGTATAGT
AGACATGGCAGTCATACAGTCAATCGAACACAGCCATGCACCACAGAATCTGAAAAATGATGCCTCTGAGGATCCATCAATGTTATGCAGTAAGAAAACTAATGAGGAGCTTCCCAGTGGTGCTGGTGTAAAAGGTAAGAAGAGGAGGGCATCAAGTGAGGAGAAGGATGAGAATAGGCAAATCCACCGATCACCCACCC
AGCGCGTTGCCAACATTGCACTGAAGGATCTTGCAAAATATTTTGATGTGCCGATCACTGAAGCTTCAAGGAGTTTGAAGGTAGGGCTTACAGTCTTGAAAAGGAAATGTAGAGAATTTGGCATCCCTCGCTGGCCGCACAGGAAAATCAAGTCCCTTGACAGTCTCATACAGGATGTACAGGAAGAAGCCAAGAGACAG
GAGAGAGAAGATAAAGCTGCAGCTATGGCAGCAATGAAAAGAACAAGGATATTGGAAACCGAGAGACAAAAGATTGAGAAGAAACCTGGAATAGACATCAAAAAAGACACTAAGAGATTTCGACAGGACATATTTAAGAGAAGGCACAAGGCAAGAGCTATTAAAAAGAAAATTTGAGCAAATAAATTCTGGCAGCTTCC
ACAGTTTATTGCTGACACAGTTGATGCAGGACTACATGCACTCTTTTAGAGGCCTGGTGCAGATATGGTACTTCATCAACTTGTTACCAAGAGACTTGACCTATGAAGATATGAGAGGTTAAATTTCAAATGGTTGGTGATAAGTCAGTTTGGCTATTGATAATCAAATGTTTGTAACCGCTAGAAAGTTTCTAAGTGAT
CAATGCAAGGCAAGAAGTCTATTTCTGGTTGCCCAAATCCACAGAAAACATGTATATGGACAAGATATCCATCAAGTGATTAATCGATATAACTATAACATTGAAGTACCCACAAAATACAGATTCAATTTTGAATTATTTTATATTTATAGGTTCTTTTTACCTTTCTGGCATTTCTTATCTCAACCTTCTCCTCCCTT
TTGCATGCTCCCCTTTTAGCCCAATGTTTCTCCCTTTCCAGTAGGTTGGTTAATGGGAGACTTGTAGTGACATTTATTTTAGGTCTTGGTCTACTAACTGACCAATGGTGAGGTTCATAACTTCATCTTTCACTAATCGTCCGAAGTGCACTTGATATTTAGCCAGTGGCTTGCAAGATTTGCAAATTTTTTAGAGTAAG
GCCTATGTTGACTAATGCCTTTGCATCCCTTTCTTGCAACTTTACAACTACATCTAGATCAATGGGTTTGGGATTTAT
>TRINITY_DN114863_c0_g1_i2 from sample A1 / Example unspliced isoform:CAAAAGTTGAATTAAAAGAATAGGTGCTCTCCATTATTATTACAAATGGAATGGGGATGGGGTTGGGGTTGGGTTTGCGCGTGGTTTTGCAGAGGCGTGGTAAGATGGTGTATTTTCTTCCTCCTGCTGTTCAATATTCTTCTTCTGCACCGCAGTCTTTATGGCACGCGATGATGTGGCATCCCTCAATGCCTTTCCCT
CTCCCCCGCCTATTTCTTTTTCTTTCTGCTGGACTAAATGTCATCAATCATTTTCAGCCTCATCATTTCCTTCGTTTTTCCTTCATTTCATGGCCATGGACTCTTACTCGCGCTCCGAGAGCTCTCCTTCTCATCTCCATCTCCATCTCTGCGCTCTGGCAGTGTTTCAGAATCTGCTGAATGAAGAGCTTATAAAGGGC
GTTCATCTGTATCAACTGCAAGATGGCACTATATCTGCTATTCAACGAGAGTTCATGTTTTTCCCTAGCTCATATAAGCAGATAGGCCTCGAAAATATTCCTCCTGTTCATGTTTGTGGCAAGGAGAACGTACACGAGTTCATGTTTTTCCCTAGCTCATATAAGCAGATAGGCCTCGAAAATATTCCTCCTGTTCATGT
TTGTGGCAAGGAGAACGTACACGAGTTCATGGCGAATCTACAGGAAGGAGAAGAGCGCGGGCTTTGGATTTGTATTCTCCATTATAACTGCAATCTCAGGCCTATCAACTTCACAATTCCCAATATTCTCAACCTAGCCAGGAATCCTGCACTGAAAACCATACCAGAGCTAGCAATTGATCTCGATCGCGTTGCGAGAT
TCAAACAAGCGTTAGACTCTTCTCACCCTCAGAAATATTTGGGCGAGAAAATGTTAAACTATGAATTAACTGACATGCAGTCCAATTTTCTTGGCATTGAGGGTTTCTGGCTTGCTATTCCTGGCTTAACAACCGTGCAGGACTGTATTGACGATACACTCAGTAGACCCTCTGTTATTGAAAGCCCTCTGAGCCTCGAT
CAGATCGATAACTCTTATAGCATCAGGAACATCTGCAATAAAGATAGCCCTAACCCTAACCCTGGGCAACAAATCACCCCTTACCTAAAAGGGTGTTCATCTTGTAACCCAAATGAAGTAAGATCAATTATAGGCAATAATTCAAGATGCCTCGAAAGGGACAATCACACTGCTGATCAGAAATCAAGTCCAAGTATAGT
AGACATGGCAGTCATACAGTCAATCGAACACAGCCATGCACCACAGAATCTGAAAAATGATGCCTCTGAGGATCCATCAATGTTATGCAGTAAGAAAACTAATGAGGAGCTTCCCAGTGGTGCTGGTGTAAAAGGTAAGAAGAGGAGGGCATCAAGTGAGGAGAAGGATGAGAATAGGCAAATCCACCGATCACCCACCC
AGCGCGTTGCCAACATTGCACTGAAGGATCTTGCAAAATATTTTGATGTGCCGATCACTGAAGCTTCAAGGAGTTTGAAGGTAGGGCTTACAGTCTTGAAAAGGAAATGTAGAGAATTTGGCATCCCTCGCTGGCCGCACAGGAAAATCAAGTCCCTTGACAGTCTCATACAGGATGTACAGGAAGAAGCCAAGAGACAG
GAGAGAGAAGATAAAGCTGCAGCTATGGCAGCAATGAAAAGAACAAGGATATTGGAAACCGAGAGACAAAAGATTGAGAAGAAACCTGGAATAGACATCAAAAAAGACACTAAGAGATTTCGACAGGACATATTTAAGAGAAGGCACAAGGCAAGAGCTATTAAAAAGAAgtatgaattctcaaactcaaactctgaaaa
cggagatcgatcagaagaagttccatcagtttccaccattctatcattgatgatagataagactagaatttctccatcaaccaattaattatctgtatctatcttttgttttttgctacagAATTTGAGCAAATAAATTCTGGCAGCTTCCACAGTTTATTGCTGACACAGTTGATGCAGGACTACATGCACTCTTTTAG
AGGCCTGGTGCAGATATGGTACTTCATCAACTTGTTACCAAAGAGACTTGACCTATGAAGATATGAGAGGTTAAATTTCAAATGGTTGGTGATAAGTCAGTTTGGCTATTGATAATCAAATGTTTGTAACCGCTAGAAAGTTTCTAAGTGATCAATGCAAGGCAAGAAGTCTATTTCTGGTTGCCCAAATCCACAGAAAA
CATGTATATGGACAAGATATCCATCAAGTGATTAATCGATATAACTATAACATTGAAGTACCCACAAAATACAGATTCAATTTTGAATTATTTTATATTTATAGGTTCTTTTTACCTTTCTGGCATTTCTTATCTCAACCTTCTCCTCCCTTTTGCATGCTCCCCTTTTAGCCCAATGTTTCTCCCTTTCCAGTAGGTTG
GTTAATGGGAGACTTGTAGTGACATTTATTTTAGGTCTTGGTCTACTAACTGACCAATGGTGAGGTTCATAACTTCATCTTTCACTAATCGTCCGAAGTGCACTTGATATTTAGCCAGTGGCTTGCAAGATTTGCAAATTTTTTAGAGTAAGGCCTATGTTGACTAATGCCTTTGCATCCCTTTCTTGCAACTTTACAAC
TACATCTAGATCAATGGGTTTGGGATTTAT