sp|Q8L817|ATCA7_ARATH ----> Alpha carbonic anhydrase 7

Intron 1 GTACAATCTC ... GTTGAAACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	9.3	39	4	0
A2	20.75	42	11	3
A3	13.25	72	11	0
A4	15.94	58	11	4
A5	7.89	35	3	2
A6	8.66	306	29	4
A7	11.32	431	55	3
A8	11.88	378.3	51	3
A9	10.74	424	51	6
A10	9.3	400	41	2

>TRINITY_DN113820_c0_g1_i1 from sample A2 / Example spliced isoform

CGGGGTTCGATCTCAGGAAGTTGGTAATTCATCTCATATCTCCTTTCTTCTGGTTTTCAAATTTGCTGATATTCATCTACAAGTCGATAATTTTTTTGTTTGAAACGACAGAGGATGAAAGCGAATTCGAGTACGAAGAGGGCCCCAAGGGGCCTGAGCACTGGGGGGAGCTCAAGGAGGAATGGAAGGCCTGCGGGAAC
GGGACGCAGCAATCTCCGATCGATGTTGTGAAGAGACATGCCAGAATCAATCCGGATATGCGCAGGCTCCGCAGAATCTATCGCCCTGCAAATGCAACCCTCATGAACAGGGGCCACGACATCATGCTGAAATGGCCGAATGGCGCCGGTAGTATTGAGATAGAAGGGAAAAGATTCACACTGAATCAATGCCATTGGCA
CGCCCCGGCCGAGCACACTGTGGACGGAAAACGGCATCCGTTAGAAACCCATCTGGTGCATCAAGCAGAGGACGGCAAAATCGCCGTGATAGGAATCATTTACAAGTTTGGCAGGCCTGACACTTTCCTGGCGGAGTTAATGAATGAAATCAAGTCTATTTCGGATATGGAACCCCCGGAAGAAGCTCTGGGCATGGTGG
ATCCGAAGCACATAAAACTGGGCAGCAGGAAATATTACCGGTACACGGGATCTCTCACCACTCCTCCCTGCACGGAGGGAGTAATTTGGACTGTGATTCACAAGGTACGGACCGTGTCCAGAGGCCAAGTGACTACTCTACATGAAGCTATACATGATAATCATGAAATGAATGCAACACCTATCCAATCTACAAACGGA
AGAGTTGTTCGCATGTATACTCCAAAACTCAATGGCCAACATAAATGAGTATTATGCATGTGTTATACTCTTCAAAAGAATTGAGAACAAACTTTTTATTGATTCAGAGTGATATGTAAAATGGAGAATAGATTGGAGTTTTTTCAACTAATATGGATTATTATAACAAATTTTATTACAAAATGAATTTTGC

>TRINITY_DN113820_c0_g1_i5 from sample A2 / Example unspliced isoform:

CGTCGACAGAGAAATGCCGTTGGAAATTCCATTATTTTAATTTCAATTGTGTTTGTGACCAAATCCGTGGCTACGTCAGTGTTTGTTGGGCAGGTAACACAGTATCTCACGATGGCACCATCTGTAACATCTGCAACATTCTTTGCATTTGCTTTCATGTTTCTCTGCATCGCCGGGGTTCGATCTCAGGAAGTTGAGGA
TGAAAGCGAATTCGAGTACGAAGAGGGCCCCAAGGGGCCTGAGCACTGGGGGGAGCTCAAGGAGGAATGGAAGGCCTGCGGGAACGGGACGCAGCAATCTCCGATCGATGTTGTGAAGAGACATGCCAGAATCAATCCGGATATGCGCAGGCTCCGCAGAATCTATCGCCCTGCAAATGCAACCCTCATGAACAGGGGCC
ACGACATCATGCTGAAATGGCCGAATGGCGCCGGTAGTATTGAGATAGAAGGGAAAAGATTCACACTGAATCAATGCCATTGGCACGCCCCGGCCGAGCACACTGTGGACGGAAAACGgtacaatctcacaaccctttcttgatctctggtacactaaattatgtttggtgtttgctgaagggtttacgttgaaacagGC
ATCCGTTAGAAACCCATCTGGTGCATCAAGCAGAGGACGGCAAAATCGCCGTGATAGGAATCATTTACAAGTTTGGCAGGCCTGACACTTTCCTGGCGGAGTTAATG

Intron 2 GTATTCTCAT ... CGGTGAGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	21.74	36	10	2
A2	18.03	50	11	0
A3	17.24	48	10	1
A4	11.11	40	5	0
A5	26.67	11	4	4
A6	16.43	239	47	0
A7	19.86	339	84	2
A8	14.95	512	90	3
A9	13.94	358	58	0
A10	14.75	289	50	2

>TRINITY_DN103641_c0_g1_i1 from sample A5 / Example spliced isoform

TCAGGGCAACCCTCTTCTTCTTTAACTCTGACGGCGTCGACAGAGAAATGCTGTTGGAAATTCCATTATTTTAATTTCAATTGTGTTTGTGACCAAATCCGTGGCTACGTCAGTGTTTGTTGGGCAGGTAACACAGTATCTCACGATGGCACCATCTGTAACATCTGCAACATTCTTTGCATTTGCTTTCATGTTTCTCT
GCATCGCCGGGGTTCGATCTCAGGAAGTTGAGGATGAAAGCGAATTCGAGTACGAAGAGGGCCCCAAGGGGCCTGAGCACTGGGGGGAGCTCAAGGAGGAATGGAAGGCCTGCGGGAACGGGACGCAGCAATCTCCGATCGATGTTGTGAAGAGACATGCCAGAATCAATCCGGATATGCGCAGGCTCCGCAGAATCTAT
CGCCCTGCAAATGCAACCCTCATGAACAGGGGCCACGACATCATGCTGAAATGGCCGAAAGGCGCCGGTAGTATTGAGTTAGAAGGGAAAAGATTCACACTGAATCAATGCCATTGGCACGCCCCGGCCGAGCACACTGTGGACGGAAAACGGCATCCGTTAGAAACCCATCTGGTGCATCAAGCAGAGGACGGCAAAAT
CGCCGTGATAGGAATCATTTACAAGTTTGGCAGGCCTGACACTTTCCTGGCGGAGTTAATGAATGAAATCAAGTCTATTTCGGATATGGAACCCCCGGAAGAAGCTCTGGGCATGGTGGATCCGAAGCACATAAAACTGGGCAGCAGGAAATATTACCGGTACACGGGATCTCTCACCACTCCTCCCTGCACGGAGGGAG
TAATTTGGACTGTGATTCACAAGGTACGGACCGTGTCCAGAGGCCAAGTGACTACTCTACATGAAGCTATACATGATAATCATGAAATGAATGCAACACCTATCCAATCTACAAACGGAAGAGTTGTTCGCATGTATACTCCAAAACTCAATGGCCAACATAAATGAGTATGATGCATGTGTTATACTCTTCAAAAGAAT
TGAGAACAAACTTTTTATTGATTCAGAGTGATATGTAAAATGGAGAATAGATTGGAGTTTTTTCA

>TRINITY_DN103641_c0_g1_i6 from sample A5 / Example unspliced isoform:

AATGAAATCAAGTCTATTTCGGATATGGAACCCCCGGAAGAAGCTCTGGGCATGGTGGATCCGAAGCACATAAAACTGGGCAGCAGGAAATATTACCGGTACACGGGATCTCTCACCACTCCTCCCTGCACGGAGGGAGTAATTTGGACTGTGATTCACAAGgtattctcattgcccatctagttagatattgggtaacc
agaatcgaccttgtgacttgatgcttttggttaatcggtgagcagGTACGGACCGTGTCCAGAGGCCAAGTGACTACTCTACATGAAGCTATACATGATGTAAGTACTACTCCCGTTGAATCCAAT

Intron 3 GTAATTCATC ... GAAACGACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	5.26	36	0	2
A2	20	72	2	18
A3	14.08	61	0	10
A4	18.67	61	0	14
A5	10.81	33	0	4
A6	15.75	107	0	20
A7	20.18	178	0	45
A8	16.55	121	0	24
A9	14.24	283	0	47
A10	15.82	250	0	47

>TRINITY_DN113820_c0_g1_i2 from sample A2 / Example spliced isoform

CGTCGACAGAGAAATGCCGTTGGAAATTCCATTATTTTAATTTCAATTGTGTTTGTGACCAAATCCGTGGCTACGTCAGTGTTTGTTGGGCAGGTAACACAGTATCTCACGATGGCACCATCTGTAACATCTGCAACATTCTTTGCATTTGCTTTCATGTTTCTCTGCATCGCCGGGGTTCGATCTCAGGAAGTTGAGGA
TGAAAGCGAATTCGAGTACGAAGAGGGCCCCAAGGGGCCTGAGCACTGGGGGGAGCTCAAGGAGGAATGGAAGGCCTGCGGGAACGGGACGCAGCAATCTCCGATCGATGTTGTGAAGAGACATGCCAGAATCAATCCGGATATGCGCAGGCTCCGCAGAATCTATCGCCCTGCAAATGCAACCCTCATGAACAGGGGCC
ACGACATCATGCTGAAATGGCCGAATGGCGCCGGTAGTATTGAGATAGAAGGGAAAAGATTCACACTGAATCAATGCCATTGGCACGCCCCGGCCGAGCACACTGTGGACGGAAAACGGCATCCGTTAGAAACCCATCTGGTGCATCAAGCAGAGGACGGCAAAATCGCCGTGATAGGAATCATTTACAAGTTTGGCAGG
CCTGACACTTTCCTGGCGGAGTTAATGAATGAAATCAAGTCTATTTCGGATATGGAACCCCCGGAAGAAGCTCTGGGCATGGTGGATCCGAAGCACATAAAACTGGGCAGCAGGAAATATTACCGGTACACGGGATCTCTCACCACTCCTCCCTGCACGGAGGGAGTAATTTGGACTGTGATTCACAAGGTACGGACCGT
GTCCAGAGGCCAAGTGACTACTCTACATGAAGCTATACATGATAATCATGAAATGAATGCAACACCTATCCAATCTACAAACGGAAGAGTTGTTCGCATGTATACTCCAAAACTCAATGGCCAACATAAATGAGTATTATGCATGTGTTATACTCTTCAAAAGAATTGAGAACAAACTTTTTATTGATTCAGAGTGATAT
GTAAAATGGAGAATAGATTGGAGTTTTTTCAACTAATATGGATTATTATAACAAATTTTATTACAAAATGAATTTTGC

>TRINITY_DN113820_c0_g1_i1 from sample A2 / Example unspliced isoform:

CGGGGTTCGATCTCAGGAAGTTGgtaattcatctcatatctcctttcttctggttttcaaatttgctgatattcatctacaagtcgataatttttttgtttgaaacgacagAGGATGAAAGCGAATTCGAGTACGAAGAGGGCCCCAAGGGGCCTGAGCACTGGGGGGAGCTCAAGGAGGAATGGAAGGCCTGCGGGAAC
GGGACGCAGCAATCTCCGATCGATGTTGTGAAGAGACATGCCAGAATCAATCCGGATATGCGCAGGCTCCGCAGAATCTATCGCCCTGCAAATGCAACCCTCATGAACAGGGGCCACGACATCATGCTGAAATGGCCGAATGGCGCCGGTAGTATTGAGATAGAAGGGAAAAGATTCACACTGAATCAATGCCATTGGCA
CGCCCCGGCCGAGCACACTGTGGACGGAAAACGGCATCCGTTAGAAACCCATCTGGTGCATCAAGCAGAGGACGGCAAAATCGCCGTGATAGGAATCATTTACAAGTTTGGCAGGCCTGACACTTTCCTGGCGGAGTTAATGAATGAAATCAAGTCTATTTCGGATATGGAACCCCCGGAAGAAGCTCTGGGCATGGTGG
ATCCGAAGCACATAAAACTGGGCAGCAGGAAATATTACCGGTACACGGGATCTCTCACCACTCCTCCCTGCACGGAGGGAGTAATTTGGACTGTGATTCACAAGGTACGGACCGTGTCCAGAGGCCAAGTGACTACTCTACATGAAGCTATACATGATAATCATGAAATGAATGCAACACCTATCCAATCTACAAACGGA
AGAGTTGTTCGCATGTATACTCCAAAACTCAATGGCCAACATAAATGAGTATTATGCATGTGTTATACTCTTCAAAAGAATTGAGAACAAACTTTTTATTGATTCAGAGTGATATGTAAAATGGAGAATAGATTGGAGTTTTTTCAACTAATATGGATTATTATAACAAATTTTATTACAAAATGAATTTTGC