sp|O23372|ATXR3_ARATH ----> Histone-lysine N-methyltransferase ATXR3
Intron 1 GTAAGATTTA ... TAACATACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.81 | 160 | 50.3 | 16.2 |
| A2 | 22.07 | 146 | 46.4 | 13.2 |
| A3 | 21.05 | 153 | 45.9 | 14.2 |
| A4 | 21.78 | 116.2 | 36.3 | 15.5 |
| A5 | 22.62 | 53 | 17.6 | 12.1 |
| A6 | 21.48 | 272 | 84 | 25.9 |
| A7 | 20.18 | 282.2 | 79.8 | 27.5 |
| A8 | 19.72 | 342 | 93.1 | 50.3 |
| A9 | 20.89 | 264 | 78.4 | 34.6 |
| A10 | 21.1 | 213 | 63.8 | 29.6 |
>TRINITY_DN115966_c0_g1_i12 from sample A1 / Example spliced isoformCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAAT
TTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAG
ATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCA
GAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGG
AGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACA
GGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGAT
AAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAA
GGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATT
TGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTT
GATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGT
TTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGAT
CAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAA
GTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGC
ATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAA
AAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCA
TGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTT
GACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGT
CTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGG
ATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGG
CATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATA
ATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGAT
GCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATC
TCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACG
TGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTT
GCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGC
AGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCA
CAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGAC
AATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGT
GGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATA
CACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGAT
AGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAG
GTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAG
GCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCAT
CAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAA
AAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCAT
TACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGA
GGCCGACATGATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCA
GCTGATGTATTGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAA
AGGGTGAGTTTTGGGAATTCAAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTC
CTTTGGGCATATGCTTTGGGAAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTG
TGTATGATTCTTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCA
CATGTATACAGTGAAGTGACCATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGC
GACCTATCCAAGAAAGACTGACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACAT
TGCTTAAATTGTACAAACAGTTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATG
TTTTTCACTCAACATTTAAGGGGC
>TRINITY_DN115966_c0_g1_i1 from sample A1 / Example unspliced isoform:CACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAAT
TTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAG
ATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCA
GAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGG
AGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACA
GGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGAT
AAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAA
GGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATT
TGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTT
GATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGT
TTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGAT
CAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAA
GTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGC
ATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAA
AAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCA
TGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTT
GACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGT
CTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGG
ATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGG
CATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATA
ATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGAT
GCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATC
TCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACG
TGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTT
GCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGC
AGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCA
CAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGAC
AATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGT
GGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATA
CACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGAT
AGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAG
GTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAG
GCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCAT
CAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAA
AAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCAT
TACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGgtaagatttactagtccctcataggctttggaagtaaaca
atggaagcctctgtcagtgtcttcagtgaaagcagctttgcctaagccacaaacataaaaatccacaggttttattttaaatttttaactagtatatatttgctgttttttgcccaccttcatatgttattttaacatacagGCTAAGAGATGAGCTGCGAGGC
Intron 2 GTGTGTGAAA ... AACTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.75 | 104 | 31.7 | 24 |
| A2 | 23.58 | 81 | 32.8 | 25 |
| A3 | 24.25 | 102 | 39.5 | 32.7 |
| A4 | 16.67 | 50 | 16.7 | 10 |
| A5 | 14.29 | 30 | 5.8 | 5 |
| A6 | 21.57 | 40 | 13.3 | 11 |
| A7 | 17.89 | 101 | 29.2 | 22 |
| A8 | 16.39 | 51 | 18.3 | 10 |
| A9 | 21.11 | 71 | 24.2 | 19 |
| A10 | 22.35 | 66 | 12.5 | 19 |
>TRINITY_DN112368_c0_g2_i7 from sample A2 / Example spliced isoformGGTGCTGCTTTTCCGATAATTATTTTTGATCTTTCTTTTCTCTGTCAAATTTGTTGGAACATTGTAAAGGAATTGACTTTTACTTTTTTGTTCACGCAGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAAT
AGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATA
TTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGT
AGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAA
GTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGAC
CAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGT
TGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGA
GTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAG
AATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGC
ACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGA
GAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATT
ACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGG
GGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTC
AGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATA
TAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGCAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCA
AAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGTAAGATTTACTAGTCCCTCATAGGCTTTGGAAGTAAACAATGGAAGCCTCTGTCAGTGTCTTCAGTGAAAGCAGCTTTGCCTAAGCCACAAACATAAAAATCCACAGGTTTTATTTTAAATTTTTAACTAGTATATATT
>TRINITY_DN112368_c0_g2_i4 from sample A2 / Example unspliced isoform:AGCATGCCATTATCGAAGAGgtgtgtgaaatggtgtatgccttttgcttaatgatgtcgcctttatactaattttttttatcattattggaactaatgactatgggagaaactttgcagGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAAT
GTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGT
TTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATT
GTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTT
CAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAAT
CAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTC
CTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGCAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTG
TGGTAAGATTTACTAGTCCCTCATAGGCTTTGGAAGTAAACAATGGAAGCCTCTGTCAGTGTCTTCAGTGAAAGCAGCTTTGCCTAAGCCACAAACATAAAAATCCACAGGTTTTATTTTAAATTTTTAACTAGTATATATT
Intron 3 GTGTGTAGTG ... TTCTTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 30.21 | 201 | 13.3 | 87 |
| A2 | 29 | 142 | 12 | 58 |
| A3 | 22.83 | 142 | 10.1 | 42 |
| A4 | 32.62 | 126 | 14.3 | 61 |
| A5 | 33.85 | 43 | 3.3 | 22 |
| A6 | 32.14 | 340 | 23.9 | 161 |
| A7 | 31 | 316 | 18 | 142 |
| A8 | 29.45 | 448 | 33.9 | 187 |
| A9 | 31.01 | 307 | 26 | 138 |
| A10 | 31.55 | 217 | 13.3 | 100 |
>TRINITY_DN99204_c0_g2_i4 from sample A4 / Example spliced isoformGCCCGGGAGTTTTGGAAAAACAATTAAAAAACCAAAAAACTAAAAATAAAAGACAATCCTCCCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAAGAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAAT
GGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTGTGCGCCATCAATTTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAG
TGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAGATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGG
AGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCAGAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGG
AATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGGAGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTC
GGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACAGGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGA
GTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGATAAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGC
AAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAAGGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTT
ACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATTTGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGC
CCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTTGATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAA
GAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGTTTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAG
AGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGATCAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTG
AAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAAGTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAG
AAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGCATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAA
TGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAAAAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACA
ATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCATGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGAT
CTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTTGACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACC
TGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGTCTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTT
TATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGGATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAA
CTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGGCATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGA
CGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATAATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTA
AGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGATGCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATA
ACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGA
TTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAG
CTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGAT
GTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATC
TCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGA
CTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATG
ACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAG
ACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCA
TGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTC
GTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTG
TCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATC
TCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGG
TTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTGAGTGGACTGTATTCCATTTAAAA
TACTATTCTCTGAATCTGACAAATGTGAAGGAGTGCTAAGTATTTGATATGCTCTGATCTGCTTATGGATAACTGAAATGGCTGAATTGAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCAT
TCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGAGGCCGACATGATGCAGCTGC
TGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCAGCTGATGTATTGGTATGTAC
AGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAAAGGGTGAGTTTTGGGAATTC
AAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTCCTTTGGGCATATGCTTTGGG
AAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTGTGTATGATTCTTTACAACCA
AGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCACATGTATACAGTGAAGTGAC
CATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGCGACCTATCCAAGAAAGACTG
ACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACATTGCTTAAATTGTACAAACAG
TTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATGTTTTTCACTCAACATTTA
>TRINITY_DN99204_c0_g2_i3 from sample A4 / Example unspliced isoform:GCCCGGGAGTTTTGGAAAAACAATTAAAAAACCAAAAAACTAAAAATAAAAGACAATCCTCCCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAAGAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAAT
GGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTGTGCGCCATCAATTTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAG
TGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAGATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGG
AGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCAGAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGG
AATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGGAGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTC
GGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACAGGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGA
GTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGATAAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGC
AAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAAGGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTT
ACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATTTGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGC
CCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTTGATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAA
GAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGTTTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAG
AGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGATCAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTG
AAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAAGTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAG
AAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGCATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAA
TGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAAAAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACA
ATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCATGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGAT
CTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTTGACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACC
TGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGTCTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTT
TATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGGATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAA
CTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGGCATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGA
CGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATAATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTA
AGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGATGCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATA
ACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGA
TTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAG
CTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGAT
GTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATC
TCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGA
CTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATG
ACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAG
ACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCA
TGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTC
GTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTG
TCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATC
TCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGG
TTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCA
TCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAG
GCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGAGGCCGACATGATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAA
AGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCAGCTGATGTATTGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGG
CTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGgtgtgtagtgtgggtgtttgattcataatttcctagttcagcttatatttcttgtctagatgatttttctgattgctgtggcattctttacagGAGCGACAACCTCAAAAGCAATGGCCAAAGGGTGAGTTTTGGGAATTCAAGAATAATCGTGGATTGTTTGGGA
GTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTCCTTTGGGCATATGCTTTGGGAAGTGGTAATCATCTCAAAACAATG
GTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTGTGTATGATTCTTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTT
AGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCACATGTATACAGTGAAGTGACCATTGTGGTTTGTCATTATTTTGCA
TTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGCGACCTATCCAAGAAAGACTGACCAACATGATTTGTCATGAGGTGC
TTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACATTGCTTAAATTGTACAAACAGTTAAATTTGTTTGGAATCCATGCTG
TACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATGTTTTTCACTCAACATTTA
Intron 4 GTATTGCTCC ... ATTCTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 11.72 | 211 | 32 | 24 |
| A2 | 17.27 | 170 | 46 | 25 |
| A3 | 15.12 | 247 | 61 | 27 |
| A4 | 16.85 | 153 | 38 | 24 |
| A5 | 14.61 | 114 | 24 | 15 |
| A6 | 20 | 2 | 1 | 0 |
| A7 | 6.98 | 20 | 1 | 2 |
| A8 | 0 | 2 | 0 | 0 |
| A9 | 4.35 | 11 | 1 | 0 |
| A10 | 17.07 | 34 | 7 | 7 |
>TRINITY_DN112330_c0_g3_i6 from sample A3 / Example spliced isoformAAAACAATTAAAAAACCAAAAAACTAAAAATAAAAGACAATCCTCCCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGC
GGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAATTTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTT
GTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAGATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAA
CAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCAGAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACG
AAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGGAGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCA
CGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACAGGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAG
ATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGATAAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGA
GTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAAGGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGC
AATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATTTGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATC
ACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTTGATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAAC
TTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGTTTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGA
AGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGATCAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCC
ACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAAGTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATAC
ATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGCATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAG
AGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAAAAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGA
ACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCATGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGG
GAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTTGACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGC
CAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGTCTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGA
TACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGGATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACA
TCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGGCATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCA
CGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATAATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAA
GTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGATGCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAAT
TCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGAT
ATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTC
TGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCA
GAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATAT
TCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAG
TTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGG
TTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTT
GGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGTGTGAAATGGTGTATGCCTTTTGCTTAATGATGTCGCCTTTATACTAATTTTTTTTATCATTATTGGAACTAAT
GACTATGGGAGAAACTTTGCAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGT
CCACTGATAAATATGTTGCTTATAGGAAGG
>TRINITY_DN112330_c0_g3_i8 from sample A3 / Example unspliced isoform:AAAACAATTAAAAAACCAAAAAACTAAAAATAAAAGACAATCCTCCCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGC
GGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAATTTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTT
GTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAGATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAA
CAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCAGAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACG
AAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGGAGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCA
CGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACAGGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAG
ATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGATAAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGA
GTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAAGGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGC
AATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATTTGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATC
ACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTTGATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAAC
TTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGTTTCAGgtattgctccatctgtttctttctgttacgggtagaacagtgtaggattttataatccccagtatttgtagattaatactaggtaatttgttagctgtgatgctgtttttggtagactttttgtaataagttgttttctttctcatttc
attctaattcaacgggctttcatttgtcagccttttgaaatattgtttgagtatgttacaaacctacaaagatttattcttgcagAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGA
GTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGATCAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCG
ATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAAGTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCT
TATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGCATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAA
AACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAAAAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACA
GCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCATGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTC
GTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTTGACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCA
TTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGTCTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCA
GGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGGATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGT
AATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGGCATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGAT
AAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATAATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAAT
ATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGATGCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCA
ATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGA
TATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATG
GTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTA
AAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAG
Intron 5 GTGAGTGGAC ... TGAATTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 11.89 | 126 | 33.1 | 17 |
| A2 | 13.45 | 103 | 43.7 | 16 |
| A3 | 13.33 | 182 | 66.4 | 28 |
| A4 | 13.98 | 80 | 28.7 | 13 |
| A5 | 16 | 63 | 25.4 | 12 |
| A6 | 12.18 | 173 | 61.7 | 24 |
| A7 | 9.27 | 235 | 85.3 | 24 |
| A8 | 16.01 | 236 | 67.1 | 45 |
| A9 | 14.55 | 235 | 104 | 40 |
| A10 | 13.43 | 174 | 64.5 | 27 |
>TRINITY_DN115966_c0_g1_i12 from sample A1 / Example spliced isoformCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAAT
TTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAG
ATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCA
GAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGG
AGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACA
GGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGAT
AAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAA
GGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATT
TGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTT
GATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGT
TTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGAT
CAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAA
GTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGC
ATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAA
AAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCA
TGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTT
GACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGT
CTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGG
ATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGG
CATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATA
ATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGAT
GCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATC
TCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACG
TGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTT
GCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGC
AGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCA
CAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGAC
AATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGT
GGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATA
CACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGAT
AGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAG
GTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAG
GCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCAT
CAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAA
AAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCAT
TACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGA
GGCCGACATGATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCA
GCTGATGTATTGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAA
AGGGTGAGTTTTGGGAATTCAAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTC
CTTTGGGCATATGCTTTGGGAAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTG
TGTATGATTCTTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCA
CATGTATACAGTGAAGTGACCATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGC
GACCTATCCAAGAAAGACTGACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACAT
TGCTTAAATTGTACAAACAGTTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATG
TTTTTCACTCAACATTTAAGGGGC
>TRINITY_DN115966_c0_g1_i4 from sample A1 / Example unspliced isoform:CACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAAT
TTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAG
ATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCA
GAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGG
AGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACA
GGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGAT
AAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAA
GGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATT
TGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTT
GATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGT
TTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGAT
CAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAA
GTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGC
ATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAA
AAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCA
TGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTT
GACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGT
CTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGG
ATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGG
CATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATA
ATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGAT
GCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATC
TCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACG
TGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTT
GCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGC
AGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCA
CAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGAC
AATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGT
GGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATA
CACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGAT
AGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAG
GTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAG
GCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCAT
CAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAA
AAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGgtgagtggactgtattccatttaaaatactattctctgaatctgacaaatgtgaaggagtgctaagtatttgatatgctctgatctgc
ttatggataactgaaatggctgaattgaagGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCG
CTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGAGGCCGACATGATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTC
TAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCAGCTGATGTATTGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCA
GACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAAAGGGTGAGTTTTGGGAATTCAAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTAT
AGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTCCTTTGGGCATATGCTTTGGGAAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTG
TAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTGTGTATGATTCTTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTT
GCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCACATGTATACAGTGAAGTGACCATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGG
TTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGCGACCTATCCAAGAAAGACTGACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTT
AGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACATTGCTTAAATTGTACAAACAGTTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATA
CATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATGTTTTTCACTCAACATTTAAGGGGC
Intron 6 GTCTGAAATA ... TCTTTGTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 19.42 | 83.5 | 20 | 3 |
| A2 | 11.11 | 56.1 | 7 | 0 |
| A3 | 10.83 | 66 | 8 | 4 |
| A4 | 7.46 | 62.4 | 5 | 0 |
| A5 | 31.47 | 26.3 | 12 | 6 |
| A6 | 27.27 | 24 | 9 | 2 |
| A7 | 12.95 | 67.3 | 10 | 0 |
| A8 | 6.82 | 41.1 | 3 | 0 |
| A9 | 23.83 | 54.4 | 17 | 0 |
| A10 | 21.25 | 52 | 14 | 0 |
>TRINITY_DN112330_c0_g3_i1 from sample A3 / Example spliced isoformATGCTTTGTTTCAGTCCATTATGGTAGGTGCTGCTTTTCCGATAATTATTTTTGATCTTTCTTTTCTCTGTCAAATTTGTTGGAACATTGTAAAGGAATTGACTTTTACTTTTTTGTTCACGCAGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTT
CAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAAC
AAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAAT
CTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTAC
TCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTC
AGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAA
GATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGG
GTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCT
TGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAA
ACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTT
GTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGT
AGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGT
GTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGG
TTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGC
AATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAA
TTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGTAAGATTTACTAGTCCCTCATAGGCTTTGGAAGTAAACAATGGAAGCCTCTGTCAGTGTCTTCAGTGAAAGCAGCTTTGCCTAAGCCACAAACATAAAAATCCACAGGTTTTATTTTAAATTTTTAACTAGTATA
TATTTGCTGTTTTTTGCCCACCTTCATATGTTATTTTAACATACAG
>TRINITY_DN112330_c0_g3_i5 from sample A3 / Example unspliced isoform:AAAACAATTAAAAAACCAAAAAACTAAAAATAAAAGACAATCCTCCCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGC
GGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAATTTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTT
GTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAGATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAA
CAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCAGAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACG
AAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGGAGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCA
CGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACAGGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAG
ATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGATAAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGA
GTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAAGGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGC
AATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATTTGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATC
ACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTTGATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAAC
TTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGTTTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGA
AGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGATCAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCC
ACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAAGTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATAC
ATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGCATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAG
AGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAAAAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGA
ACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCATGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGG
GAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTTGACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGC
CAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGTCTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGA
TACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGGATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACA
TCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGGCATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCA
CGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATAATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAA
GTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGATGCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAAT
TCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGAT
ATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTC
TGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCA
GAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATAT
TCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAG
TTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGG
TTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTT
GGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCA
AAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGgtctgaaataagtccttgaagcttatataaaagcacgcacctcagttttattcaataaaatatagtgatt
gatgtttattttctttgtcagGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTATGGCTTATGTGATCATTAAGTGTGCTTTTTGTGGTTGTCGTGGTAGTTATTTTTAATGGTCGAAAAGACCGAAGTAAATATTGCAAGGGACCAAATGTTGCTTA
TTTTCTGCATGGCAATGCTTTTAATTTTCCTTTCTTGATTTTCTTTAAAGCTCCCTAAAGCCAAAATTTCATTATGAAATCCAGGCTTTTACATCCAGAAGCTAGCATCATATACAAGGCAATGGATGTTATGCCAGTGTTTCATATTGGTTATGCATACAAATTTCCTTGAACTATAAATTTGATTTTCAGGTTCGAAT
TCTACAAGTGAAAATTTAACCATTTATACATATATTCTGGATACAGAAAATCGCGTTGGAGGATTTGATTCAAGTTATGGTGTTTGGGTTGATCTACCCTCTTACCAGATTTAGCTGTTAGGTCATCTAGATAGGCCTCGATGAGTTATGTTGTATATATGTGAAGTATTTTTGTTTTCACCTTAAAAAGTAAATAATGT
TTAGGGATTGGTTGAAAGGTTGGCCGACTCAGAATTTGGTAATGTTTTGTCTTTCATTATTTTTTTGAAGAATTTCAGATGTCCATGTGAAAATTGGTGAAGCACTGGCAATAGGGCCTATACTTATGGTTGTGTAATGTTCA
Intron 7 GTCTTTTAAA ... TCTTTGTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 54.47 | 56 | 67 | 3 |
| A2 | 63.16 | 21 | 36 | 0 |
| A3 | 56.34 | 31 | 40 | 4 |
| A4 | 52.27 | 21 | 23 | 0 |
| A5 | 61.76 | 13 | 21 | 6 |
| A6 | 71.88 | 9 | 23 | 2 |
| A7 | 60.66 | 24 | 37 | 0 |
| A8 | 58.33 | 15 | 21 | 0 |
| A9 | 70.59 | 15 | 36 | 0 |
| A10 | 60.87 | 27 | 42 | 0 |
>TRINITY_DN109868_c0_g1_i6 from sample A5 / Example spliced isoformGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAA
TGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGG
ATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACC
CGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAGCAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTT
GGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAA
GGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCC
TGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGT
ATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACA
AATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTT
GGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGG
TTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGAGGCCGACATGATGCAGCTGCTGATCTT
ATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCAGCTGATGTATTGGTATGTACAGACTTC
TTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAAAGGGTGAGTTTTGGGAATTCAAGAATA
ATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTCCTTTGGGCATATGCTTTGGGAAGTGGT
AATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTGTGTATGATTCTTTACAACCAAGCAGAG
AAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCACATGTATACAGTGAAGTGACCATTGTG
GTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGCGACCTATCCAAGAAAGACTGACCAAC
>TRINITY_DN109868_c0_g1_i2 from sample A5 / Example unspliced isoform:GTCGAAGACCACACACTTTCTTCTTCTACACCACGACATGCTATGCTGGTGAATTTACGATATTAACACAAACCCTTCAACATTTAATGAGTTTTGGAAAAACAAATAAAAAACCAAAAAACTAAAAATAAAAGACAATCCTCCCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAA
TGTGAGTTGTGAGATATAGATAGAGGAAGAAGAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTGTGCGCCATCAATTTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCG
CGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAGATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCC
GAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCAGAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTAC
TAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGGAGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCAT
TTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACAGGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCAT
TTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGATAAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGA
CGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAAGGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTC
TTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATTTGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGAT
GGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTTGATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACA
GGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGTTTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTG
CAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGATCAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACG
TGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAAGTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGA
TCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGCATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTC
CGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAAAAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTA
CTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCATGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGT
CATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTTGACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCA
GTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGTCTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCAT
CCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGGATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTC
TAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGGCATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCC
AGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATAATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAG
AGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGATGCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTC
TTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAG
TAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACA
CATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGA
GGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGT
TTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGT
GTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGG
ATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATT
ATCAGAGAAAGCTCACAGCAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAG
CAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGgtcttttaaaggccttgcagagccgtcagtc
cactgataaatatgttgcttataggaaggtctgaaataagtccttgaagcttatataaaagcacgcacctcagttttattcaataaaatatagtgattgatgtttattttctttgtcagGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTATGGCTT
ATGTGATCATTAAGTGTGCTTTTTGTGGTTGTCGTGGTAGTTATTTTTAATGGTCGAAAAGACCGAAGTAAATATTGCAAGGGACCAAATGTTGCTTATTTTCTGCATGGCAATGCTTTTAATTTTCCTTTCTTGATTTTCTTTAAAGCTCCCTAAAGCCAAAATTTCATTATGAAATCCAGGCTTTTACATCCAGAAGC
TAGCATCATATACAAGGCAATGGATGTTATGCCAGTGTTTCATATTGGTTATGCATACAAATTTCC
Intron 8 GTATGATTAA ... CTGTCAATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.42 | 121 | 50 | 24 |
| A2 | 20.98 | 81 | 36 | 7 |
| A3 | 25.9 | 113 | 42 | 37 |
| A4 | 21.21 | 65 | 19 | 16 |
| A5 | 22.22 | 35 | 10 | 10 |
| A6 | 30.43 | 8 | 6 | 1 |
| A7 | 20.41 | 39 | 10 | 10 |
| A8 | 21.74 | 9 | 3 | 2 |
| A9 | 14.67 | 32 | 8 | 3 |
| A10 | 21.93 | 73 | 20 | 21 |
>TRINITY_DN112330_c0_g3_i1 from sample A3 / Example spliced isoformATGCTTTGTTTCAGTCCATTATGGTAGGTGCTGCTTTTCCGATAATTATTTTTGATCTTTCTTTTCTCTGTCAAATTTGTTGGAACATTGTAAAGGAATTGACTTTTACTTTTTTGTTCACGCAGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTT
CAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAAC
AAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAAT
CTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTAC
TCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTC
AGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAA
GATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGG
GTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCT
TGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAA
ACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTT
GTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGT
AGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGT
GTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGG
TTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGC
AATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAA
TTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGTAAGATTTACTAGTCCCTCATAGGCTTTGGAAGTAAACAATGGAAGCCTCTGTCAGTGTCTTCAGTGAAAGCAGCTTTGCCTAAGCCACAAACATAAAAATCCACAGGTTTTATTTTAAATTTTTAACTAGTATA
TATTTGCTGTTTTTTGCCCACCTTCATATGTTATTTTAACATACAG
>TRINITY_DN112330_c0_g3_i7 from sample A3 / Example unspliced isoform:AAAACAATTAAAAAACCAAAAAACTAAAAATAAAAGACAATCCTCCCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGC
GGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAATTTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTT
GTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAGATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAA
CAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCAGAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACG
AAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGGAGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCA
CGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACAGGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAG
ATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGATAAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGA
GTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAAGGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGC
AATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATTTGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATC
ACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTTGATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAAC
TTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGTTTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGA
AGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGATCAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCC
ACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAAGTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATAC
ATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGCATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAG
AGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAAAAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGA
ACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCATGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGG
GAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTTGACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGC
CAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGTCTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGA
TACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGGATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACA
TCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGGCATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCA
CGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATAATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAA
GTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGATGCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAAT
TCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGAT
ATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTC
TGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCA
GAAAAGCATTCCAgtatgattaaattgcatttgttttatatctgattagtttttcttttttgtaggaaatttgttttattactgtgcttgaaggggaagtgcactctgtatttggtttgttctcatttgaagtgttgaatttaaatattgattatcataaagtttgatgtttattgtgttttcactggctgtcaatagGG
AACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAAT
GTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGA
TGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCC
GAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTG
GAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAG
GATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTT
GGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAA
GTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTT
AAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTG
ATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTG
AGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGA
TGAGCTGCGAGGCATCCCATCATCATGTAGAGGCCGACATGATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAA
AGGCTTATAGCAAGGAGTATGCACTAGGGCAGCTGATGTATTGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGA
ATGGAGCGACAACCTCAAAAGCAATGGCCAAAGGGTGAGTTTTGGGAATTCAAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTT
TGGAATGATTATTTCATTAATTTAGAGCTTCCTTTGGGCATATGCTTTGGGAAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCA
AGTGGGTTGCATCTGCCTCCATGAGGCTTTGTGTATGATTCTTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTC
ACGACGCATTTATAAATTGAAGTGCCTTTCACATGTATACAGTGAAGTGACCATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTC
TTCAAAGGATGCAGGAATATTTCCTATGGGCGACCTATCCAAGAAAGACTGACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTAT
GTTGATGGAGTGAATATGTACATAGAAACATTGCTTAAATTGTACAAACAGTTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGC
Intron 9 GTCTTTTAAA ... TTATAGGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 62.52 | 56 | 105 | 82 |
| A2 | 75.23 | 21 | 72 | 55.6 |
| A3 | 70.25 | 31 | 81 | 65.4 |
| A4 | 74.43 | 21 | 61 | 61.4 |
| A5 | 67.79 | 13 | 29 | 25.8 |
| A6 | 76.92 | 9 | 36 | 24 |
| A7 | 74.3 | 24 | 72 | 66.8 |
| A8 | 72.61 | 15 | 39 | 40.6 |
| A9 | 79.02 | 15 | 59 | 54 |
| A10 | 67.73 | 27 | 62 | 51.4 |
>TRINITY_DN115966_c0_g1_i11 from sample A1 / Example spliced isoformCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAAT
TTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAG
ATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCA
GAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGG
AGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACA
GGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGAT
AAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAA
GGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATT
TGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTT
GATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGT
TTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGAT
CAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAA
GTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGC
ATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAA
AAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCA
TGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTT
GACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGT
CTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGG
ATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGG
CATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATA
ATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGAT
GCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATC
TCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACG
TGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTT
GCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGC
AGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCA
CAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGAC
AATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGT
GGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATA
CACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGAT
AGCCGTATGCGCACATTATTTCAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGA
GACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCC
CTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTT
GCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGG
CAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTAT
GTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGAGGCCGACATGATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTT
TACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCAGCTGATGTATTGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCAC
GCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAAAGGGTGAGTTTTGGGAATTCAAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGAT
GCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTCCTTTGGGCATATGCTTTGGGAAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCAT
AAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTGTGTATGATTCTTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTT
TCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCACATGTATACAGTGAAGTGACCATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTT
GCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGCGACCTATCCAAGAAAGACTGACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGG
AAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACATTGCTTAAATTGTACAAACAGTTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGAT
TTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATGTTTTTCACTCAACATTTAAGGGGC
>TRINITY_DN115966_c0_g1_i5 from sample A1 / Example unspliced isoform:CTGATTAGTTTTTCTTTTTTGTAGGAAATTTGATTTATTACTGTGCTTGAAGGGGAAGTGCACTCTGTATTTGGTTTGTTCTCATTTGAAGTGTTGAATTTAAATATTGATTATCATAAAGTTTGATGTTTATTGTGTTTTCACTGGCTGTCAATAGGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAA
ATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAA
CAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGG
AAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGAT
GAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCT
TTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGC
GCACATTATTTCAAGgtcttttaaaggccttgcagagccgtcagtccactgataaatatgttgcttataggaagGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAG
AAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATAC
ATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCG
TTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCT
GGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAA
GGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGAGGCCGACATG
ATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCAGCTGATGTAT
TGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAAAGGGTGAGTT
TTGGGAATTCAAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTCCTTTGGGCAT
ATGCTTTGGGAAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTGTGTATGATTC
TTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCACATGTATACA
GTGAAGTGACCATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGCGACCTATCCA
AGAAAGACTGACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACATTGCTTAAATT
GTACAAACAGTTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATGTTTTTCACTC
AACATTTAAGGGGC
Intron 10 GTACCAGACT ... GCGGAGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 0.54 | 213.1 | 74.3 | 1.2 |
| A2 | 1.61 | 194.4 | 81.5 | 3.2 |
| A3 | 0.49 | 295.4 | 106.2 | 1.5 |
| A4 | 0 | 179.5 | 82.7 | 0 |
| A5 | 1.38 | 103.9 | 33.2 | 1.5 |
| A6 | 0 | 273.3 | 88.4 | 0 |
| A7 | 0 | 416.2 | 143.7 | 0 |
| A8 | 0.33 | 350.8 | 119.9 | 1.2 |
| A9 | 0.14 | 426.8 | 156.5 | 0.6 |
| A10 | 0.04 | 401.9 | 174.8 | 0.2 |
>TRINITY_DN115966_c0_g1_i12 from sample A1 / Example spliced isoformCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAAT
TTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAG
ATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCA
GAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGG
AGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACA
GGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGAT
AAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAA
GGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATT
TGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTT
GATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGT
TTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGAT
CAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAA
GTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGC
ATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAA
AAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCA
TGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTT
GACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGT
CTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGG
ATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGG
CATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATA
ATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGAT
GCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATC
TCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACG
TGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTT
GCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGC
AGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCA
CAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGAC
AATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGT
GGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATA
CACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGAT
AGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAG
GTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAG
GCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCAT
CAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAA
AAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCAT
TACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGA
GGCCGACATGATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCA
GCTGATGTATTGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAA
AGGGTGAGTTTTGGGAATTCAAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTC
CTTTGGGCATATGCTTTGGGAAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTG
TGTATGATTCTTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCA
CATGTATACAGTGAAGTGACCATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGC
GACCTATCCAAGAAAGACTGACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACAT
TGCTTAAATTGTACAAACAGTTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATG
TTTTTCACTCAACATTTAAGGGGC
>TRINITY_DN115966_c0_g1_i3 from sample A1 / Example unspliced isoform:TTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATT
GTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTT
CAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAAT
CAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGgtaccagactaaggtccaccagtgttcagtagctagtttatctgtaggaaaaattattattttattgatggcctgactatatgtttatctgcggagacag
GCAGAGGGAGTCTACAATCA
Intron 11 GTAGGTGCTG ... GTTCACGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 19.23 | 84 | 0 | 20 |
| A2 | 19.23 | 84 | 0 | 20 |
| A3 | 29.8 | 106 | 2 | 45 |
| A4 | 16.98 | 88 | 1 | 18 |
| A5 | 4.76 | 20 | 0 | 1 |
| A6 | 0 | 6 | 0 | 0 |
| A7 | 20 | 20 | 0 | 5 |
| A8 | 16.67 | 5 | 0 | 1 |
| A9 | 21.43 | 11 | 0 | 3 |
| A10 | 0 | 13 | 0 | 0 |
>TRINITY_DN112330_c0_g3_i8 from sample A3 / Example spliced isoformAAAACAATTAAAAAACCAAAAAACTAAAAATAAAAGACAATCCTCCCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGC
GGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAATTTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTT
GTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAGATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAA
CAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCAGAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACG
AAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGGAGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCA
CGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACAGGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAG
ATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGATAAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGA
GTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAAGGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGC
AATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATTTGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATC
ACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTTGATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAAC
TTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGTTTCAGGTATTGCTCCATCTGTTTCTTTCTGTTACGGGTAGAACAGTGTAGGATTTTATAATCCCCAGTATTTGTAGATTAATACTAGGTAATTTGTTAGCTGTGATGCTGTTTTTGGTAGACTTTTTGTAATAAGTTGTTTTCTTTCTCATTTC
ATTCTAATTCAACGGGCTTTCATTTGTCAGCCTTTTGAAATATTGTTTGAGTATGTTACAAACCTACAAAGATTTATTCTTGCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGA
GTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGATCAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCG
ATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAAGTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCT
TATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGCATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAA
AACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAAAAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACA
GCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCATGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTC
GTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTTGACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCA
TTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGTCTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCA
GGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGGATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGT
AATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGGCATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGAT
AAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATAATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAAT
ATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGATGCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCA
ATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGA
TATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATG
GTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTA
AAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAG
>TRINITY_DN112330_c0_g3_i1 from sample A3 / Example unspliced isoform:ATGCTTTGTTTCAGTCCATTATGgtaggtgctgcttttccgataattatttttgatctttcttttctctgtcaaatttgttggaacattgtaaaggaattgacttttacttttttgttcacgcagAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTT
CAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATCTCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAAC
AAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACGTGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAAT
CTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTTGCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTAC
TCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGCAGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTC
AGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCACAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAA
GATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGACAATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGG
GTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGTGGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCT
TGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATACACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAA
ACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGATAGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTT
GTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAGGTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGT
AGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAGGCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGT
GTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCATCAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGG
TTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGC
AATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAA
TTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGTAAGATTTACTAGTCCCTCATAGGCTTTGGAAGTAAACAATGGAAGCCTCTGTCAGTGTCTTCAGTGAAAGCAGCTTTGCCTAAGCCACAAACATAAAAATCCACAGGTTTTATTTTAAATTTTTAACTAGTATA
TATTTGCTGTTTTTTGCCCACCTTCATATGTTATTTTAACATACAG
Intron 12 GTGTGTTTTA ... TTCACACCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 24.62 | 150 | 26.8 | 49 |
| A2 | 25.29 | 127 | 19.8 | 43 |
| A3 | 27.4 | 159 | 13.8 | 60 |
| A4 | 28.67 | 107 | 7.2 | 43 |
| A5 | 28.21 | 56 | 4.8 | 22 |
| A6 | 21.64 | 134 | 17.6 | 37 |
| A7 | 24.54 | 203 | 32.4 | 66 |
| A8 | 23.18 | 175 | 16.8 | 52.8 |
| A9 | 26.34 | 151 | 10.4 | 54 |
| A10 | 24.1 | 233 | 28.8 | 74 |
>TRINITY_DN115966_c0_g1_i12 from sample A1 / Example spliced isoformCACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAAT
TTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAG
ATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCA
GAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGG
AGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACA
GGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGAT
AAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAA
GGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATT
TGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTT
GATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGT
TTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGAT
CAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAA
GTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGC
ATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAA
AAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCA
TGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTT
GACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGT
CTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGG
ATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGG
CATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATA
ATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGAT
GCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATC
TCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACG
TGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTT
GCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGC
AGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCA
CAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGAC
AATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGT
GGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATA
CACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGAT
AGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAG
GTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAG
GCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCAT
CAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAA
AAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGATAAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCAT
TACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGATCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGA
GGCCGACATGATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTCCTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCA
GCTGATGTATTGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACCCCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAA
AGGGTGAGTTTTGGGAATTCAAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAGAAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTC
CTTTGGGCATATGCTTTGGGAAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTATCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTG
TGTATGATTCTTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGAAGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCA
CATGTATACAGTGAAGTGACCATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCATCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGC
GACCTATCCAAGAAAGACTGACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAGTATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACAT
TGCTTAAATTGTACAAACAGTTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTTTATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATG
TTTTTCACTCAACATTTAAGGGGC
>TRINITY_DN115966_c0_g1_i8 from sample A1 / Example unspliced isoform:CACATCCCCGCTATTCCCTATAATCCAACGTTGCCATCCAACATTAGATTTCACAATGTGAGTTGTGAGATATAGATAGAGGAAGAACAAGAAACAAGCGAAGAATGCCGTCAAAGTCTTCCATAATTGTAGATGAATGGATGAATAAGCGCGCGGGGAGGCTTCTTGATTCTGCTCCAGATCATCTCTGCGCCATCAAT
TTTTTCTGCAACAGTGAATCCCCGGGGGTGGGTTCGAAACCCTAGATCGACAACCGCGACTCAGCCGTGCGTCAGATCGACTTTCGCGGGTTAAGGCAAAGGATATTGAATTCATGATGAGCATCGACAGTCCGGAAGTGGGTTGATTTCTTTTGTTTTACTTTTCCTTTTAAAGAGGAATTTCTGATTTTCCATGGGAG
ATGGAGGTGTTGCCTGCGTGGCGTCGCGACATGTTATGGAACATTTTTCCACCTCCGAGCCCTTTTGTGGGAACAATACTATCAATAGCATTCACGGATTCGACATAAATTCAAAATCTTCGAAGTTCACGGATCAGGAGCTTCAGGAAGATAACAGGAATACTAGCAACTCCCAGTGTGTTAAGGAAGGGAGTAGTGCA
GAAGAATTTTGTAAGTTACGGGGTACAGGTGCTAGTGTTATTGCTAATACTTGTACTAATGCTGCTGCTTTTGTTGTTGAGCATGTAGATAGGCCGAAGAGATCCTCGAGGTGGGATGTTGTTGAAGAGAATGCTGGGAATTCGAGGATTAACGAAACTGAATTAGGAGTAGGACTAGGATTGTATAAGCATGACGGTGG
AGATGAGGGGCATGCCAGTGGCAGTGTGCAAGAGGATGAATTGGGAATAGCAGCATTTGAGAATACTGCAAAAGAACATCATGGGAATCAGAGTGAGAGGTTGGATGCTCGAGGTGGGTCGAAGAGCAGGAGGATTTCGGACGAGGTGCATTCACGCTCCGGGCATTTCGAATCAACTTTGCCGAGAAATTCAATTGACA
GGCATTCTGTTCATTATAAGTCTTCGAGAACTTACTATGATAGGCATTCGAGGCATTTTGAATTGCCATCCTCTAGGAGTGGGCATGATAGGTATTCTCGAAGGTCTGGGAGTGTGGACAGGGGTTACTCTGAAAGGAGTTCACATGACAGGAGATGGCAATATGAAGAGAGGAATGGGTATAGGAAGAGTGGTGCAGAT
AAATTTCACAGCAGATACAGCAGCCAAGCTCATGAAGATAGGCAGTATCATAGGGACGTTGGATGGAGAGAGAGTCGCCGGCATTCAAACCATAGACAATCTCAGAGTGGCCGGAGTGATCACATTTCTGATGATAGCAAGGGACGTTTTACGAGTCACTCTGGGAGTCATAGTAGGTCATCTTATTCTAGCATCACAAA
GGATTCAAGGTCCAAGGATGTGGAAACTCAACTGGGTATATCACCTTCACAAACTCTTGCATCAGAACAGTCGGAAAGGATTCCAAATGAATTGCAAAAGGATAGCAACAGTGCTCACTTTAGTGAACTGAATGCTTTACCGGAAGAAATTTGCAATATTGAAGAACCAAGGTGCCGTGGGTGGTTCTATCTCGATCATT
TGGGATTTGAACAAGGGCCCTCAAAACTTGGGGAGTTGAAAAGGCTTGTTGAAGATGGACTGCTCCAATCTGATCACTTGATCAAGCGAGAAGGAACCGATGAGTGGGTAACCGTAGAGCATGCAGCGTCTCCTATGCCCTTTGGTAATCTATCACTACCAACTTCCAGGGTCTTCCTGCAATCTCAGAGTAGGCAGTTT
GATGGAACTTCAATGAATAAACCTGGGGTGGCGGCAAATGCTTGTCGAAATGTACAGGGGATAGATAACCGTAATAGCACTCTTTTTGTCCAGCAGCATGATTTTAATAGCGACGGGATTGAAGATTTTCACATTGAAGAAAGAGTAGAAAAACTTATGCAAGGATTCCTTCTGATTCCAGGCAGAGAGAATGAGGTCGT
TTCAGAGGCTCTATGCCATGCAGCTCGAGACGTGAATTGTGACATGGAACACAGTGCAGAATGGGAAGCGTCTCCAGGGCTTAGAGATGGATATCCAGGGCTTAGAGATGGATATATTGAGTACTCCAATCATTGGAGAGATGCAGAGCTTGGAAGGGGGTTCGGAAATGCATTTAATGTGTCCAAGATGGCAACTAGAT
CAGGAGCAACAGTGGAGAAGGAGTTGGATTATGGCAAGGATGTTTCTACTGCTACGTGTACATTGCTCAGCAATGAAGGATCCTCTCAAGTTTCTGGCAGATGGCCATCTAAAGGTGGCGATTGGAAGCGGATAGGTGAAGTGGAAAACTTTCCACGGACTCAAAATGTAGTTGGTGGTGACAGGCTTTTGAAGAAAAAA
GTAGTTCTCAATGATGGGGTTCTACTCTGCGACATTTGGAAGTCTGGAGAGTTGGATCCACGCAGAGAAGCATCTTCTCATACTACACAGCTTAAGCGGCTAGAATTGCCTGCTTGGGCTTATCACTGGCAAGAAGAGAAAAGTGATTCCATACATAAGGTGGATAATGCGTTTGAAGTCCACCCACAAGCAGGTCAGGC
ATCAAGTGCAACACCAAAAGCACATGCTTCTACACCCAAATCACAAGTTTCTACTCCGATTGCTCAGATTTCAACACCAAGGGGATCTGCTGTCACTGTTTGTGGATATGATGGGTATAAAACAACAAAACCAAACAATGGGGATTTCAGTAAGAGTATCATAGGAAACAAATCAAATTCTCAGATGTCTGCAACAGCAA
AAGGCTTGAATGCTGTCAAAGGTGCATTGCTATTTCAGTGTGAAATGAAATCTGTACTGAAGAGCAATGCAGCAGTTTTTAAAGAATCCGGTCCTTTAGCTTGGGAGTTATGCACTAACAGCCATTATACGGGACACAATATTGTGAAGTTTGAACAGGTTGCGGATCAGCCATTACATCAATATGAAATTGGCAATGCA
TGTGGTAATCCTGCAGAGGAAACTAATGTGTCACCTTCCAAGGTTCATAAACCTGTCATGCCTCCTATGCCTGGGGCTGAAGCAGCTAAGCCGAATCAAGGAATTTCTTCAGGACACGTCGTGAGAACTGTAAATGATCTCAACTTACACATGGGAGAGTGGTATTATCGTGATGGTGCTGGCCATGAAAAGGGTCCGTT
GACATTCACACAGCTTCAGATGCTTGTGTCTGAAGGGACCCTACATAATGATAGCAGTGTATACAGGACAAGTGATAATACTTGGGTTCCAGTTTCACATGACATATTTGCAACTCTCCATTCAAAGAAAATTTTACCTGCTGATTCCTCCTGCCAACCTCCTAGTACTGCTAATCCTGTTTATACAATTTCAGAGCAGT
CTAAGCTTGAGGATTGTTCAACAAGCCAGGTTGATTATTGTTTCCATACATCGCATCCTCAGTTCGTGGCACTTGCACGAGGCAAGTTACATGAGCATGTCATGAAATTTTATAAGAGCAGGGACTTTGCAGCAGCTTTATGGGAAGGTTTGGATACTTGGATGGCCCCGAAGCAATCAAAGAACTCGGCAGACACACGG
ATCACAAGCGTTTTACTGGCACCACCTCTTTCAACAGCAGATAATGCTGCCATCTCTAATCACATGGAGAAAGCTGTTGACTTGCAGAATTCAGAGGTGAAGCTGGATGAAATTGTCAGTAATTCAAATCCAGGTCAACTGGGTGTCAGCCACATCATTTCACGCACGGGTCTATACATGTCAGATTCTGAAAAAGGTGG
CATCCATAACAGATCAGAAACTGAATTAGTGGATGCTAACGGCCATGCTAAACGCCAGCATATTTTGAAAAGTCGTCGATTGCAGGTTATTCAGGAAGGCAATAAAGGCGAGAACATGATAAATGAATTCCCGACAGACGATATTGATAGATCACGTGGATACCTGCAACAAGAAGCAAATGCTTCTATTGAGGAAAATA
ATAATACACAAAGTAAAGTGAATGGCTGGGGTATGATGAATTTACGCATCTTGGAGAGAGTTTTCCAATTTCTTGGAGCAGATTTCAAATCACTTGCATTTTCTGCTGCTACATGCAAATATTGGAATAATGCTATTAAGCTGTTCAAGTCAAAGTCCAGACGTGTTGACTTCTCTTCTATGGGTTCTGAGTGCACTGAT
GCTTTGTTTCAGTCCATTATGAGTGGTTATCGACAAGGAAAGATCAAACATATCTCTTTAAAGGGGTGTACGAATTTGAGTGCTGATGCTTTGGTTCAATCTCTACATGGCTGCTCTTCAATAGTTTCAGTGGACATAACGGGATGCAGTCAATTCAAAGATGTGACTCTGCTGTTTCGTAATGTGAACTGGCAAAGATC
TCATATTTCTGCTCCTAGCAGCAGTGGCGATCCAAGTGAAGAGACACACTGCAAAGTAAAAAGCCTTAAGCAAATAAATGACAAAATTTATGGAACAAGTAAGTCTTCTAGGGGGCTGGATATTCATATGTCAGATGATTCTGCAGGAAGAGATATATTTATGCATCCACCCGAGGCTGATCAAGGAGAGCCCATGGACG
TGGATGATGTTCAAGTAGATAGTAAAGCCACTGTAAGCACTATCCATCAGCGTACACATTATCCTAAACGCATCAAATTAGCTAGTGGTGGGAAATCTGCTAAATGCCATCTTGAGGATGGTAGTTTGAAGGGAGAAGCTTCTACAAAGTCTTCTGCTGGATATCACGGGGGAGTGGATAAGAGCATCGAGAAACATCTT
GCTACTACCCTGAAGGAAATAATGGGTGTCAATACAAATAATTTCTTTTCCCATGAGGCAGCAGAAATTGAAGACAAAATCAAAGGCGGGAGTTACTCAGCAGATATTGAGGGGGGCTTAAAGTCATTTCGGGATGATGTTTTCCTCTTCTGCAGAAAAGCATTCCAGGAACACAAGAGCGATAGTCCAGCACATCTTGC
AGCAGAGGAAATATTTAAAACAGCTCATCGCTGCATCGCCAGCCTGAAAGATAAGTTTACAAGGCTATTTTCTGGGGATACACACCGTCAGAAGTCAGGACATGTGAAAGAGATCTTGAGACCAGGAAAGGATAAATCTCAGGGTGCCTTATATTCTTCAAGTTTAAATGTAAAGAAGAGAGCTACAAGGGCCATGAGCA
CAAGTATGAACAGAATCAAGAAGAGGAGAGGCATGTCTTCTTACAGTGATTGTAGTGTTTCGATCGAGGGGGATGTGTCAGACCGTGAAAGCAGAAGATTTTCAAAACAAAAGAAAAGGTGTTGGTCGGATTCAGAGACTGAAACATCACAGAGTTCAGGGTTCCTGGATGAGGAATTTCTAGAGAAAGAAGATGATGAC
AATGATATGGAAGACTCTGATCTGGATATGAAATTTGGATTTGAAGGTGAAGATGGATACTTTGCTGAACAAAAGCATGCAATGGGAGATGATGGGGTGGACACTGAGTTTAGTGCTCGTGAGTGGGGGGCTAGAATGACAAGAGCAAGTCTGGTTCCTCCAGTTACCCGAAAATATGAGGTAATTGAAGAGTATGTTGT
GGTGACAGATGAGGATGAAGTAAGCCGAAAAATGAGGGTTTGTTTACCTGATGATTATCAGAGAAAGCTCACAACAGTGAAAGACAGGAGAGACCTTGAGTATGCACAGCTTGAAATTCCAGAATTAAAGGAATACAGACCTAGAAAACGTCTTGGAGAGGAGGTTTTGGAGCAGGAAGTTTATGGCATAGACCCATATA
CACATAATCTTTTATTAGATACCATGCCAAAAGGGTCTGACTTTTCCCTTCAACAGCAGCATGCCATTATCGAAGAGGTGGTACTTCGGGTTCTAAACGAAAAAGTTAGGGATTTTACAGGCACTGGAAATACTCCCATGGAGTATCCTCTGCAAAATGTTGTTGAAAGGATGATAGAAAAAGCTGAAAAAGCTGGTGAT
AGCCGTATGCGCACATTATTTCAAGGTCTTTTAAAGGCCTTGCAGAGCCGTCAGTCCACTGATAAATATGTTGCTTATAGGAAGGGGCTTGGAGTTGTTTGCAACAAAGAGTGTGGCTTTGAGAAAGATGAATTTGTCGTTGAGTTCTTGGGTGAGGTTTATCCTGCTTGGAGGTGGTTTGAGAAGCAGGATGGAATCAG
GTCTTTTCAGAAGAACAGTAAAGATCCTGCTCCCGAATTCTATAATATCTTTTTGGAGAGACCAAAGGGTGATGGTGCGGGATATGATTTGGTTGTAGTTGATGCCATGCACAAGGCTAATTACGCTAGCCGTATTTGTCATTCTTGTCGACCTAATTGTGAAGCCAAAGTTACTGCTGTCGGTGGCCAATACCAGATAG
GCATATATACATTAAGGCCTATACAGTATGGGGAAGAAATTACATTTGATTATAACTCCCTGACAGAGAGCAAGGAAGAGTATGAAGTGTCTGTGTGTCTCTGTGGCAGTCATGGTTGCAGGGGTAGCTATTTAAATCTCGCAGGTGCAGGAGCTTTTCAAAAGGTCTTAAAGGAATTCCATGGATTACTACATAGGCAT
CAATTGCTCGTTGAAGCTTGCACAACAAATTCTGTCACTGAAGAAGACATGAGGGATTTGCGCTGTGCAGGTCTTGGGACTTGCCTGCTGTCTGGGTTGCCTAATTGGGCTGTGGCATTTTCAGCTCGTGTGgtgtgttttacatccttttgctctacactataagctttgcttttatatactgtttttgtagacttatt
tgctacatgttatttcacaccagGTGAGGTTTATAAATTTGGAAAGAATCAGACTTCCTGATCAAATATTAAAGCATGCTATAAAGGAAAAAAAGAAAGCTGGTGTTGAGATTCTCTTGGAGTATGAGAAGAGTGATGCAGAGATTCAGGCAGAGGGAGTCTACAATCAAAGACTTCAGAGTCTTGCAATCACCCTTGAT
AAGGTAAGGTATATAATAAGAAAGCTTCATCAAGACCCAACAAAAGCTCCTCCACCTCTGAGAAAGCTCAAGGCTGCAGAGTTAGTTTCATTACTGTGGAAGGGAGAGCATTCATTGGTTGAGGAGTTACTACGATGTATGGGACCCTATGTTGATGGAGAACGGCTGAATCGCTTGAAGCAACAAATTCATGTACACGA
TCCAAGTGGTTCAAAGAATGTAGAAAAAGGCTTACGGGAGTCTTTATTGTGGCTAAGAGATGAGCTGCGAGGCATCCCATCATCATGTAGAGGCCGACATGATGCAGCTGCTGATCTTATTCACTTGTATGCATATACAAAGCACTTCTTTACTCATCTTGATTATGGTCCTCTAGAGTCTCCTCCTCTTTATATCAGTC
CTCTTGACCTGGGTCCTAAGTATGCAGAAAGCTTGGGAGGGGGATTCCGCGAATATAGAAAGGCTTATAGCAAGGAGTATGCACTAGGGCAGCTGATGTATTGGTATGTACAGACTTCTTCAGACCCAGGTAAAAGCCTAACCAAGGCACGCAGAGGTTGCCTGGTTCTTCCAGACATTTCATCATGCTATGCCAAGACC
CCCAAACAAGAGTTTTCACGTGGCTATGGCTCCAAAGAGCAGGCGGAGATGATAAGAAGAATGGAGCGACAACCTCAAAAGCAATGGCCAAAGGGTGAGTTTTGGGAATTCAAGAATAATCGTGGATTGTTTGGGAGTCCTATGTTTGATGCTGTTATAAGTGGCTCACCTATAGATAAAGAACTTGTGCAGTGGCTGAG
AAACAGGCCTGTTGTATTTGACGGTCCATGGGATCACTGACAAGGAGGCACATATTGTTTTGGAATGATTATTTCATTAATTTAGAGCTTCCTTTGGGCATATGCTTTGGGAAGTGGTAATCATCTCAAAACAATGGTGTATCTCTTCATAAGAGGTTTTCTGTACAGTTTTGTAATTGTATTCCTTAGTAGCAATTCTA
TCTTGCCTTCACCCAGCTGCATTTTCTTGATTGATTGTATTGGGGACTTCTGAATATTCAAGTGGGTTGCATCTGCCTCCATGAGGCTTTGTGTATGATTCTTTACAACCAAGCAGAGAAAGACTTCTCGCTTTTTAGAGAAAGCTCCTTTCCTTGTTTATTACACGGCATTTGCAACTTGGAATAGTTCAGACGTTTGA
AGTGTCTATTAAGTAGACAGCTTCACATCTTTTAATTCAGGTGTCATCTATTTTTTGGTCACGACGCATTTATAAATTGAAGTGCCTTTCACATGTATACAGTGAAGTGACCATTGTGGTTTGTCATTATTTTGCATTTCCAAATCACTTGCTTTCTGTTTTATTTTTCATGGTTATTTCTTTTGCAATGTCTGTATCCA
TCGAAGAAAGGCCATCGCACTAATTTCCCACCAACAGTAAAAGGCTGGAATTTAACACTCTTCAAAGGATGCAGGAATATTTCCTATGGGCGACCTATCCAAGAAAGACTGACCAACATGATTTGTCATGAGGTGCTTTCTTACAAGTGGAAGCAAAAATTGAAATCATGGTTAGTTTTATAATCAGTGTAAGTTACAAG
TATTTTCGATCTATTTTTGCAACTGTATTTGCCCATTATTTAGACATTTTGCCATCTTATGTTGATGGAGTGAATATGTACATAGAAACATTGCTTAAATTGTACAAACAGTTAAATTTGTTTGGAATCCATGCTGTACTGCAGTCAGATTTGGCGCCAGCATTGTAAAAATACATTTCCTGTTATGGGGACATCCATTT
TATAACTGAGTGCATCTGATAATGGATTACTTACTAGTTTTTTCTAAGCAGTTCACATTGTGATACACTTCTGACATGTCACGCTTTTATGTTTTTCACTCAACATTTAAGGGGC