sp|Q9M3B4|RID3_ARATH ----> Protein ROOT INITIATION DEFECTIVE 3
Intron 1 GCTCAAGTTC ... CATATGGGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 58.73 | 13.8 | 11 | 28 |
| A2 | 63.72 | 12 | 21 | 20 |
| A3 | 76.26 | 4.8 | 13 | 17 |
| A4 | 66.06 | 12.5 | 29 | 19 |
| A5 | 75.73 | 4.3 | 14 | 11 |
| A6 | 53.03 | 11.3 | 11 | 14 |
| A7 | 86.03 | 6.3 | 31 | 42 |
| A8 | 65.56 | 9.8 | 17 | 19 |
| A9 | 76.45 | 12.5 | 51 | 28 |
| A10 | 75.15 | 11.3 | 30 | 38 |
>TRINITY_DN126646_c6_g1_i3 from sample A1 / Example spliced isoformATTTTGGTGGAAGAACTTGTTTTTTATCACATTTAGACCGTAAATTCCATGCACCTTTATTTCCCTCCATTCCGACTGGAGATGTTCTTGTAATTCAGGTGCCATCCCATCCAATCCGATCTATTGATATGCTAGCCATGCGTGTTTCTATCATAGTATCATTGTCAATCCAACTATCTATTTCATGAAGGGGAAGTGGC
GCGATCCAGCGATCAAATGAGTAATCTGATATAGATAGAAATTGGCATAAATAATTCTAAAGCCCTATTTGTTTGGAGTTAAGCCGGATTGCCCAATTATTATATATATATAGGGAGGGGCGGGGGTATTAGCAGAGTATGTAGAGCTGGAGGTTCGTTCGCACCTTTTAGCTTGCTCCTATCATATAAGCCATGCGATA
GCTGACTCCACCGGGTTAATAAAACTGAGGGTTATTACTATCTCTAAAATATTTTATTTCCCAAGCTGAATTGGCTGCGCTGGGGAGGAACTATGTTCCTAATCGCTTACAAAGGAGTAGAGGAGCTCAAGCGAAGCGAGTAAGGTTGAGGAAGCAGGCATTGGAAGAATTGGAAGAAACAGGAAACGACGCAAGGGCTG
CAAGTCAGTGCTCCCCAAGGTTCTGTTCCTGTTTAGGCAGCATCTCATTGTTCAATAGCCGAAGCACCGGGGTCAATCTGGCTTCTCACAAGGAAGCTCTAGTAGTGTGTTCAGATAACAATCTGACCACAGGGATAACAATATGGGATATTAGCACTGGAGAAGAGTTGTCTCATCGTCCAACATGTGCTTCTCCTCCA
CATGGTTTGGTATGCTTAGGACACCAGTTTTTAGTAGCTGCGCAAGTTCAGAAGCCTGGTTCCTATAGGGGTGGTGCAATATTTATCTGGGCATTGAATAAGGTTGCAAGTGGGAGATTGCTTCAACAGTGGTCTTCTCACCATAAATCGGTGAGCTGTTTGGTGTTTTCAGATGATGATTCTCTTCTCGTTTCTGGTGC
AGATGATGGTGTAATTCATGTTTGGCCTTTAATTAGTATGCTAGATACAGCAGAGGATTCACAAGGAAATGCCGGGCGAACTTGTTTATATTCTTGGGCTGAGCATGGAAACTCAATAACTGATCTGGTAGTAAGCACTGGGGGATCTAATTCAGTCGTGATCTCTTCTTCTTTGGACTGTACATGCAAGGTCTGGAGTC
TTGGCCATGGGAATTTGCTGCAGACATTTGCATTTTCAACACAGATAAATGCTATTATACTAGATCCTGGAGAGCAATTACTATTTACAGGCTCCACAGATGGAACAATATTTGTCAATGAAATTGTTATTGGACTGCAAGACACTACTGCTGTTGATACAGAAGACCAATCATCTAGATTGACTGGGCACGGAGGATCC
ATTACAGCTCTAGCCTTCAGCATCAATGGATTATGGTTAATATCTGCTTCAGAAGATTGCACTGCACGTGTCTGGGATATAGTTACTGGGCAGGTTATTCAAACATTTGATCATAGGAAAGGAAAAATAACAAATATCTTAGTAATTTCACAGACATTCTTTCCTGGAAAGGATTGTCAAAAGACCAACAACAAAGGAAG
CTTGCCTCGTATTCCTGTGTCATCTTTAGAAAAGTCCTCGCAGCCAAGATCTTCATTTGAGGGAACAGTAGCAATTTTACCTTCCTATTGCTCATTGGAGGGAGAAATTGTTGCAAGTGGATCACACAGTGAAGCATCAATGAAACAACAAATACTTGATCTAGAGCAAGAAAGGTCTCCAGAAGCAGTACAGATGAAGG
TTGAAACCAGTGTGGAGAACCGTATGTGGGCTACAAGTATGATCAAGCACTTGATAAAGGTCAATAAAAGTCTCCGCTCAAAATTTCTTGATATGGTACAAAGTAGATTGTATCCAAAATCTGCTGATGTTAAGGCAAAGAAAAGGAGAAGATTAGATGTTGAGAACACATGATTGATCATAATGAAATGAAGAAACGTT
ATTTCAGAAGCAAGCTGAGCATACTTATATACTAATTGTTTTGTAATTGCAATTTTTCTTCTTCCTCTTCGGCACATTGTGTTGCCTATGTTTTGTTGGCTTTCAAGTTTTCCATTCTCTACTAAGTTTTGTTAATTGGCACAAGGGCTTTAAGATTCAAAATTGACCACATTTTTTTTCCTTAATAATTGTAGTTCTTT
AAAAAAATACTCATATCATACATTACAAAATTTTCA
>TRINITY_DN126646_c6_g1_i2 from sample A1 / Example unspliced isoform:ATTTTGGTGGAAGAACTTGTTTTTTATCACATTTAGACCGTAAATTCCATGCACCTTTATTTCCCTCCATTCCGACTGGAGATGTTCTTGTAATTCAGGTGCCATCCCATCCAATCCGATCTATTGATATGCTAGCCATGCGTGTTTCTATCATAGTATCATTGTCAATCCAACTATCTATTTCATGAAGGGGAAGTGGC
GCGATCCAGCGATCAAATGAGTAATCTGATATAGATAGAAATTGGCATAAATAATTCTAAAGCCCTATTTGTTTGGAGTTAAGCCGGATTGCCCAATTATTATATATATATAGGGAGGGGCGGGGGTATTAGCAGAGTATGTAGAGCTGGAGGTTCGTTCGCACCTTTTAGCTTGCTCCTATCATATAAGCCATGCGATA
GCTGACTCCACCGGGTTAATAAAACTGAGGGTTATTACTATCTCTAAAATATTTTATTTCCCAAGCTGAATTGGCTGCGCTGGGGAGGAACTATGTTCCTAATCGCTTACAAAGGAGTAGAGGAGCTCAAGCGAAGCGAGTAAGGTTGAGGAAGCAGGCATTGGAAGAATTGGAAGAAACAGGAAACGACGCAAGGGCTG
CAAGTCAGTGCTCCCCAAGGTTCTGTTCCTGTTTAGGCAGCATCTCATTGTTCAATAGCCGAAGCACCGGGGTCAATCTGGCTTCTCACAAGGAAGCTCTAGTAGTGTGTTCAGATAACAATCTGACCACAGGGATAACAATATGGGATATTAGCACTGGAGAAGAGTTGTCTCATCGTCCAACATGTGCTTCTCCTCCA
CATGGTTTGGTATGCTTAGGACACCAGTTTTTAGTAGCTGCGCAAGTTCAGAAGCCTGGTTCCTATAGGGGTGGTGCAATATTTATCTGGGCATTGAATAAGgctcaagttctgcatagaagctatcctgtggagcctataggaccacttgcatgtacaagtgacggagcttttcttgtaggtggagcaccttctggaaa
tttattcatatgggagGTTGCAAGTGGGAGATTGCTTCAACAGTGGTCTTCTCACCATAAATCGGTGAGCTGTTTGGTGTTTTCAGATGATGATTCTCTTCTCGTTTCTGGTGCAGATGATGGTGTAATTCATGTTTGGCCTTTAATTAGTATGCTAGATACAGCAGAGGATTCACAAGGAAATGCCGGGCGAACTTGTT
TATATTCTTGGGCTGAGCATGGAAACTCAATAACTGATCTGGTAGTAAGCACTGGGGGATCTAATTCAGTCGTGATCTCTTCTTCTTTGGACTGTACATGCAAGGTCTGGAGTCTTGGCCATGGGAATTTGCTGCAGACATTTGCATTTTCAACACAGATAAATGCTATTATACTAGATCCTGGAGAGCAATTACTATTT
ACAGGCTCCACAGATGGAACAATATTTGTCAATGAAATTGTTATTGGACTGCAAGACACTACTGCTGTTGATACAGAAGACCAATCATCTAGATTGACTGGGCACGGAGGATCCATTACAGCTCTAGCCTTCAGCATCAATGGATTATGGTTAATATCTGCTTCAGAAGATTGCACTGCACGTGTCTGGGATATAGTTAC
TGGGCAGGTTATTCAAACATTTGATCATAGGAAAGGAAAAATAACAAATATCTTAGTAATTTCACAGACATTCTTTCCTGGAAAGGATTGTCAAAAGACCAACAACAAAGGAAGCTTGCCTCGTATTCCTGTGTCATCTTTAGAAAAGTCCTCGCAGCCAAGATCTTCATTTGAGGGAACAGTAGCAATTTTACCTTCCT
ATTGCTCATTGGAGGGAGAAATTGTTGCAAGTGGATCACACAGTGAAGCATCAATGAAACAACAAATACTTGATCTAGAGCAAGAAAGGTCTCCAGAAGCAGTACAGATGAAGGTTGAAACCAGTGTGGAGAACCGTATGTGGGCTACAAGTATGATCAAGCACTTGATAAAGGTCAATAAAAGTCTCCGCTCAAAATTT
CTTGATATGGTACAAAGTAGATTGTATCCAAAATCTGCTGATGTTAAGGCAAAGAAAAGGAGAAGATTAGATGTTGAGAACACATGATTGATCATAATGAAATGAAGAAACGTTATTTCAGAAGCAAGCTGAGCATACTTATATACTAATTGTTTTGTAATTGCAATTTTTCTTCTTCCTCTTCGGCACATTGTGTTGCC
TATGTTTTGTTGGCTTTCAAGTTTTCCATTCTCTACTAAGTTTTGTTAATTGGCACAAGGGCTTTAAGATTCAAAATTGACCACATTTTTTTTCCTTAATAATTGTAGTTCTTTAAAAAAATACTCATATCATACATTACAAAATTTTCA
Intron 2 GTCAATCTGG ... ATTGAATAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 73.37 | 5.4 | 18.7 | 11 |
| A2 | 62.2 | 15.6 | 27.7 | 21 |
| A3 | 67.91 | 8.7 | 23.9 | 13 |
| A4 | 58.99 | 18.1 | 21.7 | 29 |
| A5 | 61.29 | 6 | 5 | 14 |
| A6 | 54.68 | 8.7 | 10 | 11 |
| A7 | 66.26 | 17.7 | 37.6 | 31 |
| A8 | 73.49 | 6.3 | 15.9 | 17 |
| A9 | 64.41 | 23.7 | 34.1 | 51 |
| A10 | 46.72 | 36.9 | 34 | 30 |
>TRINITY_DN36986_c0_g1_i2 from sample A6 / Example spliced isoformGTTTTTTTGTATTTTTACTTTTAAGAGGCATCTTCATCCTCATTTGATTTTTCAATGCACCTTGATTTTATTTTGGTGGAAGAACTTGTTTTTTATCACATTTAGACCGTAAATTCCATGCACCTTTATTTCCCTCCATTCCGACTGGAGATGTTCTTGTAATTCAGGTGCCATCCCATCCAATCCGATCTATTGATATG
CTAGCCATGCGTGTTTCTATCATAGTATCATTGTCAATCCAACTATCTATTTCATGAAGGGGAAGTGGCGCGATCCAGCGATCAAATGAGTAATCTGATATAGATAGAAATTGGCATAAATAATTCTAAAGCCCTATTTGTTTGGAGTTAAGCCGGATTGCCCAATTATTATATATATATAGGGAGGGGCGGGGGTATTA
GCAGAGTATGTAGAGCTGGAGGTTCGTTCGCACCTTTTAGCTTGCTCCTATCATATAAGCCATGCGATAGCTGACTCCACCGGGTTAATAAAACTGAGGGTTATTACTATCTCTAAAATATTTTATTTCCCAAGCTGAATTGGCTGCGCTGGGGAGGAACTATGTTCCTAATCGCTTACAAAGGAGTAGAGGAGCTCAAG
CGAAGCGAGTAAGGTTGAGGAAGCAGGCATTGGAAGAATTGGAAGAAACAGGAAACGACGCAAGGGCTGCAAGTCAGTGCTCCCCAAGGTTCTGTTCCTGTTTAGGCAGCATCTCATTGTTCAATAGCCGAAGCACCGGGGCTCAAGTTCTGCATAGAAGCTATCCTGTGGAGCCTATAGGACCACTTGCATGTACAAGT
GACGGAGCTTTTCTTGTAGGTGGAGCACCTTCTGGAAATTTATTCATATGGGAGGTTGCAAGTGGGAGATTGCTTCAACAGTGGTCTTCTCACCATAAATCGGTGAGCTGTTTGGTGTTTTCAGATGATGATTCTCTTCTCGTTTCTGGTGCAGATGATGGTGTAATTCATGTTTGGCCTTTAATTAGTATGCTAGATAC
AGCAGAGGATTCACAAGGAAATGCCGGGCGAACTTGTTTATATTCTTGGGCTGAGCATGGAAACTCAATAACTGATCTGGTAGTAAGCACTGGGGGATCTAATTCAGTCGTGATCTCTTCTTCTTTGGACTGTACATGCAAGGTCTGGAGTCTTGGCCATGGGAATTTGCTGCAGACATTTGCATTTTCAACACAGATAA
ATGCTATTATACTAGATCCTGGAGAGCAATTACTATTTACAGGCTCCACAGATGGAACAATATTTGTCAATGAAATTGTGATTGGACTGCAAGACACTACTGCTGTTGATACAGAAGACCAATCATCTAGATTGACTGGGCACGGAGGATCCATTACAGCTCTAGCCTTCAGCATCAATGGATTATGGTTAATATCTGCT
TCAGAAGATTGCACTGCACGTGTCTGGGATATAGTTACTGGGCAGGTTATTCAAACATTTGATCATAGGAAAGGAAAAATAACAAATATCTTAGTAATTTCACAGACATTCTTTCCTGGAAAGGATTGTCAAAAGACCAACAACAAAGGAAGCTTGCCTCGTATTCCTGTGTCATCTTTAGAAAAGTCCTCGCAGCCAAG
ATCTTCATTTGAGGGAACAGTAGCAATTTTACCTTCCTATTGCTCATTGGAGGGAGAAATTGTTGCAAGTGGATCACACAGTGAAGCATCAATGAAACAACAAATACTTGATCTAGAGCAAGAAAGGTCTCCAGAAGCAGTACAGATGAAGGTTGAAACCAGTGTGGAGAACCGTATGTGGGCTACAAGTATGATCAAGC
ACTTGATAAAGGTCAATAAAAGTCTCCGCTCAAAATTTCTTGATATGGTACAAAGTAGATTGTATCCAAAATCTGCTGATGTTAAGGCAAAGAAAAGGAGAAGATTAGATGTTGAGAACACATGATTGATCATAATGAAATGAAGAAACGTTATTTCAGAAGCAAGCTGAGCATACTTATATACTAATTGTTTTGTAATT
GCAATTTTTCTTCTTCCTCTTCGGCACATTGTGTTGCCTATGTTTTGTTGGCTTTCAAGTTTTCCATTCTCTACTAAGTTTTGTTAATTGGCACAAGGGCTTTAAGATTCAAAATTGACCACATTTTTTTTCCTTAATAATTGTAGTTCTTTAAAAAAATACTCATATCATACATTACAAAATTTTCAAGAAAAATAAAC
TAGTAAGGTCTCACAGTAAGTATTATCTCATAGCAAGTACCATCCTTGGTATGTCAATATTTCATGTAACCCTATTACAAGCAGAAGAAAGACCTAAGGAAGATATTTATACATTGAATACATACAATTGTTGGCACCTACTTAAGCCTTTGGCATCATGAATAATACATCTAGGTTGGTAATTGTATGTGTC
>TRINITY_DN36986_c0_g1_i1 from sample A6 / Example unspliced isoform:GTTTTTTTGTATTTTTACTTTTAAGAGGCATCTTCATCCTCATTTGATTTTTCAATGCACCTTGATTTTATTTTGGTGGAAGAACTTGTTTTTTATCACATTTAGACCGTAAATTCCATGCACCTTTATTTCCCTCCATTCCGACTGGAGATGTTCTTGTAATTCAGGTGCCATCCCATCCAATCCGATCTATTGATATG
CTAGCCATGCGTGTTTCTATCATAGTATCATTGTCAATCCAACTATCTATTTCATGAAGGGGAAGTGGCGCGATCCAGCGATCAAATGAGTAATCTGATATAGATAGAAATTGGCATAAATAATTCTAAAGCCCTATTTGTTTGGAGTTAAGCCGGATTGCCCAATTATTATATATATATAGGGAGGGGCGGGGGTATTA
GCAGAGTATGTAGAGCTGGAGGTTCGTTCGCACCTTTTAGCTTGCTCCTATCATATAAGCCATGCGATAGCTGACTCCACCGGGTTAATAAAACTGAGGGTTATTACTATCTCTAAAATATTTTATTTCCCAAGCTGAATTGGCTGCGCTGGGGAGGAACTATGTTCCTAATCGCTTACAAAGGAGTAGAGGAGCTCAAG
CGAAGCGAGTAAGGTTGAGGAAGCAGGCATTGGAAGAATTGGAAGAAACAGGAAACGACGCAAGGGCTGCAAGTCAGTGCTCCCCAAGGTTCTGTTCCTGTTTAGGCAGCATCTCATTGTTCAATAGCCGAAGCACCGGGgtcaatctggcttctcacaaggaagctctagtagtgtgttcagataacaatctgaccaca
gggataacaatatgggatattagcactggagaagagttgtctcatcgtccaacatgtgcttctcctccacatggtttggtatgcttaggacaccagtttttagtagctgcgcaagttcagaagcctggttcctataggggtggtgcaatatttatctgggcattgaataagGCTCAAGTTCTGCATAGAAGCTATCCTGT
GGAGCCTATAGGACCACTTGCATGTACAAGTGACGGAGCTTTTCTTGTAGGTGGAGCACCTTCTGGAAATTTATTCATATGGGAGGTTGCAAGTGGGAGATTGCTTCAACAGTGGTCTTCTCACCATAAATCGGTGAGCTGTTTGGTGTTTTCAGATGATGATTCTCTTCTCGTTTCTGGTGCAGATGATGGTGTAATTC
ATGTTTGGCCTTTAATTAGTATGCTAGATACAGCAGAGGATTCACAAGGAAATGCCGGGCGAACTTGTTTATATTCTTGGGCTGAGCATGGAAACTCAATAACTGATCTGGTAGTAAGCACTGGGGGATCTAATTCAGTCGTGATCTCTTCTTCTTTGGACTGTACATGCAAGGTCTGGAGTCTTGGCCATGGGAATTTG
CTGCAGACATTTGCATTTTCAACACAGATAAATGCTATTATACTAGATCCTGGAGAGCAATTACTATTTACAGGCTCCACAGATGGAACAATATTTGTCAATGAAATTGTGATTGGACTGCAAGACACTACTGCTGTTGATACAGAAGACCAATCATCTAGATTGACTGGGCACGGAGGATCCATTACAGCTCTAGCCTT
CAGCATCAATGGATTATGGTTAATATCTGCTTCAGAAGATTGCACTGCACGTGTCTGGGATATAGTTACTGGGCAGGTTATTCAAACATTTGATCATAGGAAAGGAAAAATAACAAATATCTTAGTAATTTCACAGACATTCTTTCCTGGAAAGGATTGTCAAAAGACCAACAACAAAGGAAGCTTGCCTCGTATTCCTG
TGTCATCTTTAGAAAAGTCCTCGCAGCCAAGATCTTCATTTGAGGGAACAGTAGCAATTTTACCTTCCTATTGCTCATTGGAGGGAGAAATTGTTGCAAGTGGATCACACAGTGAAGCATCAATGAAACAACAAATACTTGATCTAGAGCAAGAAAGGTCTCCAGAAGCAGTACAGATGAAGGTTGAAACCAGTGTGGAG
AACCGTATGTGGGCTACAAGTATGATCAAGCACTTGATAAAGGTCAATAAAAGTCTCCGCTCAAAATTTCTTGATATGGTACAAAGTAGATTGTATCCAAAATCTGCTGATGTTAAGGCAAAGAAAAGGAGAAGATTAGATGTTGAGAACACATGATTGATCATAATGAAATGAAGAAACGTTATTTCAGAAGCAAGCTG
AGCATACTTATATACTAATTGTTTTGTAATTGCAATTTTTCTTCTTCCTCTTCGGCACATTGTGTTGCCTATGTTTTGTTGGCTTTCAAGTTTTCCATTCTCTACTAAGTTTTGTTAATTGGCACAAGGGCTTTAAGATTCAAAATTGACCACATTTTTTTTCCTTAATAATTGTAGTTCTTTAAAAAAATACTCATATC
ATACATTACAAAATTTTCAAGAAAAATAAACTAGTAAGGTCTCACAGTAAGTATTATCTCATAGCAAGTACCATCCTTGGTATGTCAATATTTCATGTAACCCTATTACAAGCAGAAGAAAGACCTAAGGAAGATATTTATACATTGAATACATACAATTGTTGGCACCTACTTAAGCCTTTGGCATCATGAATAATACA
TCTAGGTTGGTAATTGTATGTGTC
Intron 3 GTGAGCTGTT ... CTTTAATTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 82.11 | 5 | 29 | 17 |
| A2 | 78.28 | 5 | 21.1 | 15 |
| A3 | 73.76 | 16 | 40 | 50 |
| A4 | 90.94 | 3 | 31.3 | 29 |
| A5 | 83.8 | 2 | 10.7 | 10 |
| A6 | 78.75 | 9 | 32.7 | 34 |
| A7 | 69.17 | 29 | 61.6 | 69 |
| A8 | 69.69 | 23 | 45.9 | 60 |
| A9 | 75.4 | 16 | 46.1 | 52 |
| A10 | 81.04 | 9 | 36 | 41 |
>TRINITY_DN41081_c0_g1_i1 from sample A7 / Example spliced isoformCTTGTAATTTTGTGGCAGAATGAATTTTTTGATTTTTAAAGTCTCTTGTAATTTTGTGGCAGAATGAATTTTTTGATTTTTAAAGTCTCTTGTAATTTTGTGGCAGAATGAGTTTTTTGTATTTTTACTTTTAAGAGGCATCTTCATCCTCATTTGATTTTTCAATGCACCTTGATTTTATTTTGGTGGAAGAACTTGTT
TTTTATCACATTTAGACCGTAAATTCCATGCACCTTTATTTCCCTCCATTCCGACTGGAGATGTTCTTGTAATTCAGGTGCCATCCCATCCAATCCGATCTATTGATATGCTAGCCATGCGTGTTTCTATCATAGTATCATTGTCAATCCAACTATCTATTTCATGAAGGGGAAGTGGCGCGATCCAGCGATCAAATGAG
TAATCTGATATAGATAGAAATTGGCATAAATAATTCTAAAGCCCTATTTGTTTGGAGTTAAGCCGGATTGCCCAATTATTATATATATATAGGGAGGGGCGGGGGTATTAGCAGAGTATGTAGAGCTGGAGGTTCGTTCGCACCTTTTAGCTTGCTCCTATCATATAAGCCATGCGATAGCTGACTCCACCGGGTTAATA
AAACTGAGGGTTATTACTATCTCTAAAATATTTTATTTCCCAAGCTGAATTGACTGCGCTGGGGAGGAACTATGTTCCTAATCGCTTACAAAGGAGTAGAGGAGCTCAAGCGAAGCGAGTAAGGTTGAGGAAGCAGGCATTGGAAGAATTGGAAGAAACAGGAAACGACGCAAGGGCTGCAAGTCAGTGCTCCCCAAGGT
TCTGTTCCTGTTTAGGCAGCATCTCATTGTTCAATAGCCGAAGCACCGGGGTCAATCTGGCTTCTCACAAGGAAGCTCTAGTAGTGTGTTCAGATAACAATCTGACCACAGGGATAACAATATGGGATATTAGCACTGGAGAAGAGTTGTCTCATCGTCCAACATGTGCTTCTCCTCCACATGGTTTGGTATGCTTAGGA
CACCAGTTTTTAGTAGCTGCGCAAGTTCAGAAGCCTGGTTCCTATAGGGGTGGTGCAATATTTATCTGGGCATTGAATAAGTTGCAGGCTCAAGTTCTGCATAGAAGCTATCCTGTGGAGCCTATAGGACCACTTGCATGTACAAGTGACGGAGCTTTTCTTGTAGGTGGAGCACCTTCTGGAAATTTATTCATATGGGA
GGTTGCAAGTGGGAGATTGCTTCAACAGTGGTCTTCTCACCATAAATCGTATGCTAGATACAGCAGAGGATTCACAAGGAAATGCCGGGCGAACTTGTTTATATTCTTGGGCTGAGCATGGAAACTCAATAACTGATCTGGTAGTAAGCACTGGGGGATCTAATTCAGTCGTGATCTCTTCTTCTTTGGACTGTACATGC
AAGGTCTGGAGTCTTGGCCATGGGAATTTGCTGCAGACATTTGCATTTTCAACACAGATAAATGCTATTATACTAGATCCTGGAGAGCAATTACTATTTACAGGCTCCACAGATGGAACAATATTTGTCAATGAAATTGTGATTGGACTGCAAGACACTACTGCTGTTGATACAGAAGACCAATCATCTAGATTGACTGG
GCACGGAGGATCCATTACAGCTCTAGCCTTCAGCATCAATGGATTATGGTTAATATCTGCTTCAGAAGATTGCACTGCACGTGTCTGGGATATAGTTACTGGGCAGGTTATTCAAACATTTGATCATAGGAAAGGAAAAATAACAAATATCTTAGTAATTTCACAGACATTCTTTCCTGGAAAGGATTGTCAAAAGACCA
ACAACAAAGGAAGCTTGCCTCGTATTCCTGTGTCATCTTTAGAAAAGTCCTCGCAGCCAAGATCTTCATTTGAGGGAACAGTAGCAATTTTACCTTCCTATTGCTCATTGGAGGGAGAAATTGTTGCAAGTGGATCACACAGTGAAGCATCAATGAAACAACAAATACTTGATCTAGAGCAAGAAAGGTCTCCAGAAGCA
GTACAGATGAAGGTTGAAACCAGTGTGGAGAACCGTATGTGGGCTACAAGTATGATCAAGCACTTGATAAAGGTCAATAAAAGTCTCCGCTCAAAATTTCTTGATATGGTACAAAGTAGATTGTATCCAAAATCTGCTGATGTTAAGGCAAAGAAAAGGAGAAGATTAGATGTTGAGAACACATGATTGATCATAATGAA
ATGAAGAAACGTTATTTCAGAAGCAAGCTGAGCATACTTATATACTAATTGTTTTGTAATTGCAATTTTTCTTCTTCCTCTTCGGCACATTGTGTTGCCTATGTTTTGTTGGCTTTCAAGTTTTCCATTCTCTACTAAGTTTTGTTAATTGGCACAAGGGCTTTAAGATTCAAAATTGACCACATTTTTTTTCCTTAATA
ATTGTAGTTCTTTAAAAAAATACTCATATCATACATTACAAAATTTTCAAGAAAAATAAACTAGTAAGGTCTCACAGTAAGTATTATCTCATAGCAAGTACCATCCTTGGTATGTCAATATTTCATGTAACCCTATTACAAGCAGAAGAAAGACCTAAGGAAGATATTTATACATTGAATACATACAATTGTTGGCACCT
ACTTAAGCCTTTGGCATCATGAATAATACATCTAGGTTGGTAATTGTATGTGTCAATAAATTTTTTTTTCTTGTTTCTGTCTCAAGGTAATTTTCAATGTAATTTTGCATGAGCTTCGTGGCCA
>TRINITY_DN41081_c0_g1_i5 from sample A7 / Example unspliced isoform:CTTGTAATTTTGTGGCAGAATGAATTTTTTGATTTTTAAAGTCTCTTGTAATTTTGTGGCAGAATGAATTTTTTGATTTTTAAAGTCTCTTGTAATTTTGTGGCAGAATGAGTTTTTTGTATTTTTACTTTTAAGAGGCATCTTCATCCTCATTTGATTTTTCAATGCACCTTGATTTTATTTTGGTGGAAGAACTTGTT
TTTTATCACATTTAGACCGTAAATTCCATGCACCTTTATTTCCCTCCATTCCGACTGGAGATGTTCTTGTAATTCAGGTGCCATCCCATCCAATCCGATCTATTGATATGCTAGCCATGCGTGTTTCTATCATAGTATCATTGTCAATCCAACTATCTATTTCATGAAGGGGAAGTGGCGCGATCCAGCGATCAAATGAG
TAATCTGATATAGATAGAAATTGGCATAAATAATTCTAAAGCCCTATTTGTTTGGAGTTAAGCCGGATTGCCCAATTATTATATATATATAGGGAGGGGCGGGGGTATTAGCAGAGTATGTAGAGCTGGAGGTTCGTTCGCACCTTTTAGCTTGCTCCTATCATATAAGCCATGCGATAGCTGACTCCACCGGGTTAATA
AAACTGAGGGTTATTACTATCTCTAAAATATTTTATTTCCCAAGCTGAATTGACTGCGCTGGGGAGGAACTATGTTCCTAATCGCTTACAAAGGAGTAGAGGAGCTCAAGCGAAGCGAGTAAGGTTGAGGAAGCAGGCATTGGAAGAATTGGAAGAAACAGGAAACGACGCAAGGGCTGCAAGTCAGTGCTCCCCAAGGT
TCTGTTCCTGTTTAGGCAGCATCTCATTGTTCAATAGCCGAAGCACCGGGGTCAATCTGGCTTCTCACAAGGAAGCTCTAGTAGTGTGTTCAGATAACAATCTGACCACAGGGATAACAATATGGGATATTAGCACTGGAGAAGAGTTGTCTCATCGTCCAACATGTGCTTCTCCTCCACATGGTTTGGTATGCTTAGGA
CACCAGTTTTTAGTAGCTGCGCAAGTTCAGAAGCCTGGTTCCTATAGGGGTGGTGCAATATTTATCTGGGCATTGAATAAGGCTCAAGTTCTGCATAGAAGCTATCCTGTGGAGCCTATAGGACCACTTGCATGTACAAGTGACGGAGCTTTTCTTGTAGGTGGAGCACCTTCTGGAAATTTATTCATATGGGAGGTTGC
AAGTGGGAGATTGCTTCAACAGTGGTCTTCTCACCATAAATCGgtgagctgtttggtgttttcagatgatgattctcttctcgtttctggtgcagatgatggtgtaattcatgtttggcctttaattagTATGCTAGATACAGCAGAGGATTCACAAGGAAATGCCGGGCGAACTTGTTTATATTCTTGGGCTGAGCATG
GAAACTCAATAACTGATCTGGTAGTAAGCACTGGGGGATCTAATTCAGTCGTGATCTCTTCTTCTTTGGACTGTACATGCAAGGTCTGGAGTCTTGGCCATGGGAATTTGCTGCAGACATTTGCATTTTCAACACAGATAAATGCTATTATACTAGATCCTGGAGAGCAATTACTATTTACAGGCTCCACAGATGGAACA
ATATTTGTCAATGAAATTGTGATTGGACTGCAAGACACTACTGCTGTTGATACAGAAGACCAATCATCTAGATTGACTGGGCACGGAGGATCCATTACAGCTCTAGCCTTCAGCATCAATGGATTATGGTTAATATCTGCTTCAGAAGATTGCACTGCACGTGTCTGGGATATAGTTACTGGGCAGGTTATTCAAACATT
TGATCATAGGAAAGGAAAAATAACAAATATCTTAGTAATTTCACAGACATTCTTTCCTGGAAAGGATTGTCAAAAGACCAACAACAAAGGAAGCTTGCCTCGTATTCCTGTGTCATCTTTAGAAAAGTCCTCGCAGCCAAGATCTTCATTTGAGGGAACAGTAGCAATTTTACCTTCCTATTGCTCATTGGAGGGAGAAA
TTGTTGCAAGTGGATCACACAGTGAAGCATCAATGAAACAACAAATACTTGATCTAGAGGTTGGTTTGGAGGTGAAGAGACTCAATAGAGAAGTGAAGTTAAAGTGTCGAAGAGGAGCCCGAATGGGAATGAGGCAAAACTCAACCCGCAACTCACAGAGGACAGTGATCCATAAAGGTGTCCAGATCCATACAATACAA
TTCGTATAATTGTATGGACG