NA ----> NA

Intron 1 GTAACGTAGT ... TCCTTGCAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	24.59	53	22.6	12
A2	30.49	55.4	29.6	19
A3	30.39	71	50	12
A4	33.33	21	9	12
A5	29.43	20.6	10.2	7
A6	25.12	477	231	89
A7	30.52	345.8	207.8	96
A8	28.7	379	223.2	82
A9	26.32	397.2	211.8	72
A10	28.73	308.4	191.6	57

>TRINITY_DN104643_c0_g1_i2 from sample A1 / Example spliced isoform

TATGAATTGACCAACGCTTGGGTGGAGGACAGGCAGGCGTCATTAAAGAAACCCTAATCTTGTCCAAAAGAGCAACGAGGGTTTTGCAAATCATTTGCCGATAAAGGGGGAAGGAAAGAGGGCTCTCGTCCACCATGGCCGAGGAGCTCTGCTCTACAGCATTACTGAGACCACGATGCGGCTTCAAGAACACCTAAAGT
CTGTTTGCAGCGCTCAAGGCCATAGCAACAATGTGGAGGGGAATATCAAGCAAAAAGGAAGGCCTTCGTTGATGTGGCGTCGAGCTAGACCACCGGTAAGCCACGGCTGTTCCTTAAGTCCTTATGGAAGAGGGTTAGCTCAAGTTGCAGCTCCAGAAACTAAGGGTTTCTTTTTCGAAAAGGCAACAAGGTCATAAGAG
ACAGCTCTCGGTTGAACTCTGTGTTTTGAAAGTATTTTAATGGCTTTATTTTTTTTTTCAGTAAATGTAATCAATAATCATGGTTAAAATTACTATTTTGGATCCGCGAAGTTGTAGCTTCTGCATTGATGGCTTTTAAGGCCAGACCTGGGGTTTCACCCGGTCTATGAAAGTTGTAAACAAAAACTCATCTTTAATTC
AACCAGGGTTTGAAAGCTTCAGTAATATGGTGTAAATAAAATGTTGTTTCCAAAAATAAATGAATTATCCGTTTGCTTATATAAAAGAATCTTTACATTTTTT

>TRINITY_DN104643_c0_g1_i1 from sample A1 / Example unspliced isoform:

TATGAATTGACCAACGCTTGGGTGGAGGACAGGCAGGCGTCATTAAAGAAACCCTAATCTTGTCCAAAAGAGCAACGAGGGTTTTGCAAATCATTTGCCGATAAAGGGGGAAGGAAAGAGGGCTCTCGTCCACCATGGCCGAGGAGCTCTGCTCTACAGCATTACTGAGACCACGATGCGGCTTCAAGAACACCTAAAGT
CTGTTTGCAGCGCTCAAGGCCATAGCAACAATGgtaacgtagtaatttcataattcctttacgaaatgcgaaaacttataactgtttactgttattttaatggcaaactttgtccttgcaagTGGAGGGGAATATCAAGCAAAAAGGAAGGCCTTCGTTGATGTGGCGTCGAGCTAGACCACCGGTAAGCCACGGCTGTT
CCTTAAGTCCTTATGGAAGAGGGTTAGCTCAAGTTGCAGCTCCAGAAACTAAGGGTTTCTTTTTCGAAAAGGCAACAAGGTCATAAGAGACAGCTCTCGGTTGAACTCTGTGTTTTGAAAGTATTTTAATGGCTTTATTTTTTTTTTCAGTAAATGTAATCAATAATCATGGTTAAAATTACTATTTTGGATCCGCGAAG
TTGTAGCTTCTGCATTGATGGCTTTTAAGGCCAGACCTGGGGTTTCACCCGGTCTATGAAAGTTGTAAACAAAAACTCATCTTTAATTCAACCAGGGTTTGAAAGCTTCAGTAATATGGTGTAAATAAAATGTTGTTTCCAAAAATAAATGAATTATCCGTTTGCTTATATAAAAGAATCTTTACATTTTTT