sp|Q6DBN1|Y4845_ARATH ----> BTB/POZ domain-containing protein At4g08455

Intron 1 GTAAATTTAG ... GGTTTATTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	92.86	2	42	10
A2	88.41	4	48	13
A3	68.09	15	37	27
A4	60.87	9	20	8
A5	68.75	5	19	3
A6	68.4	100	214	219
A7	69.61	110	312	192
A8	65.58	180	387	299
A9	64.04	155	318	234
A10	71.54	70	270	82

>TRINITY_DN43384_c4_g3_i2 from sample A8 / Example spliced isoform

AGGGAGTTGAAATGGTCGAAAGTCGATCTCAAATTTTTCCCACTTTGGATATACGACAGAAAGATTTGGTGGCAAATCCAAGTTGCCCATGCGGGGTTCTCCTTGCAAATCATTTGTTACATGGTCACCGTCGTCGAGTAAGTTGTGAATAAATTTGCTCAATGTGTGGGCTTCAACTTCGCTCACCGATTTAATTTGGG
AGAAGATTTAGGCACAGCGTGTATACCCAATAAATAATAAAAATAGAAACTTGATTCATCGTAGCAGATTCCCCAATAGGGCTGCTTGCCCTCTCTAAACTCGTCTGCCCGAGTGCAGTGGGTGGAGTGCATACAAAGTATTTGGGTAAATTGCATGTGGAATGTTCAGTTATCAGTGCATTCTAAACTCAGAATCATGG
CGAGAGATTACGGTGAAGACTGGGGAGAAGCTATGAGAATGTCAAGCATGACATGCATTTCGTGCAAAGACGAGTATACCACAAGTTCCGCAGGTACCTGCAGAGAGTGCTACGAGGAGGCGAGCGAGACAGAGGAGGAACTCAAGAAGGAAATTGAGGAGCTCAAATCCAGAATTGTATTCCTCAAGATGTGGGCACCA
GAGGCCATGCTAGATGATTACACCGATGTCAGTCTTCAACTGCCCGATGGCTCCAAGATCAAGGCTCACAGGGCTGTTTTGATTAGTAAGTCGCCGGTTTTCAAGGCAATGCTAGAGAATGAAATGGAGGAGAACAGAACTCGTACAATAAAGATTACAGATTTTAGCTATGAAGTTCTCCGCTCATTTGTACATTACCT
ATACACAGCTGAAACTTTTCCAGATGAGCAGATGGCTTATGATCTGTTGGTTCTAGCAGAAAAATATCAGGTGAAGCACCTGCGAAATGTTTGTGAAAAGTTTATCACATCAAGAGTGAATAATGACAATGCAATTATGAGCTTTGCTTTTGCTCATCAGCATAATGCGAAGCATCTTCGAGAGGCTGCGTTGTCCTTAA
TTATTGAGAACATGCACACCTTGACAACAAGGGAAGAGTATCATGAGTTGGTTGACAAGGATCCAAGATTGGTGGTGGAGATCTACGAAGCCTATCTAGCCAAACAAGTCAATACTGCCGCAAAGGAGGCTACATCAAGTTGTTAGGAATGCTGATGTTACATCCAAAACATGGGAGATATTCTCAGGAGGGATGGGACA
GTTTTATAGCCATTTACATTCTAAATTGTTAGGAATGGTAATGTTACCTCCAAAACATTTGGAATTTTCTCAGAGGGATGGGACATTTTTATAGCTATTTATAGAACTTGTGTGATTGTTCTTTTTATCTTTGAATGTTGTCATATACTTCATACACATGATTATACACTTCATGCAAAATCAACTTTTGCTTTCTAAAT
GCTGCATGATGGTTTCTATTGAAAGAATTGATATCAAATTAGTTAATAAAAG

>TRINITY_DN43384_c4_g3_i3 from sample A8 / Example unspliced isoform:

AGGGAGTTGAAATGGTCGAAAGTCGATCTCAAATTTTTCCCACTTTGGATATACGACAGAAAGATTTGGTGGCAAATCCAAGTTGCCCATGCGGGGTTCTCCTTGCAAATCATTTGTTACATGGTCACCGTCGTCGAGTAAGTTGTGAATAAATTTGCTCAATGTGTGGGCTTCAACTTCGCTCACCGATTTAATTTGGG
AGAAGATTTAGGCACAGCGTGTATACCCAATAAATAATAAAAATAGAAACTTGATTCATCGTAGCAGATTCCCCAATAGGGCTGCTTGCCCTCTCTAAACTCGTCTGCCCGAGTGCAGTGGGTGGAGTGCATACAAAGTATTTGGGTAAATTGCATGTGGAATGTTCAGTTATCAGTGCATTCTAAACTCAGAATCATGG
CGAGAGATTACGGTGAAGACTGGGGAGAAGCTATGAGAATGTCAAGCATGACATGCATTTCGTGCAAAGACGAGTATACCACAAGTTCCGCAGGTACCTGCAGAGAGTGCTACGAGGAGGCGAGCGAGACAGAGGAGGAACTCAAGAAGGAAATTGAGGAGCTCAAATCCAGAATTGTATTCCTCAAGATGTGGGCACCA
GAGGCCATGCTAGATGATTACACCGATGTCAGTCTTCAACTGCCCGATGGCTCCAAGATCAAGGCTCACAGGGCTGTTTTGATTAGTAAGTCGCCGGTTTTCAAGGCAATGCTAGAGAATGAAATGGAGGAGAACAGAACTCGTACAATAAAGATTACAGATTTTAGCTATGAAGTTCTCCGCTCATTTGTACATTACCT
ATACACAGCTGAAACTTTTCCAGATGAGCAGATGGCTTATGATCTGTTGGTTCTAGCAGAAAAATATCAGGTGAAGCACCTGCGAAATGTTTGTGAAAAGTTTATCACATCAAGAGTGAATAATGACAATGCAATTATGAGCTTTGCTTTTGCTCATCAGCATAATGCGAAGCATCTTCGAGAGGCTGCGTTGTCCTTAA
TTATTGAGAACATGCACACCTTGACAACAAGGGAAGAGTATCATGAGTTGGTTGACAAGGATCCAAGATTGGTGGTGGAGATCTACGAAGCCTATCTAGCCAAACAAGTCAATACTGCCGCAAAGGAGGCTACATCAAGTTGTTAGgtaaatttagttccatctgtcaatgttgatttgtgggtgcatatgaaaagttca
ttagttgatttcctgttggatgcatagggaaattggaaactagaccagatatctgagcagattattacaggagaaatcaatggaaattcgtgttggttgttcttgtttttcattgtgtctattgttgtaatattgttcctgtttctgggctccccgttgaatttcttatactttgatatgcaactaatgctgcttgtctc
gagcatctttgaagacaatgagtcaatcaacagtatttgctgagctgggaagttgcagtgtgaatggaagtacttgaaatattgagaataggcataaaatgaaaaaattatggcacaggcttatcaagataagatagataagataattttattattgtccaacaaatgaccaagtttccagtggttcaggtgtatatggt
atagctggtatcgatcgatactgttcatatttctgattatttaatctgaaatggcctcaattctgaggccttgtgtataacccattttgtttcggtttattagGAATGCTGATGTTACATCCAAAACATGGGAGATATTCTCAGGAGGGATGGGACAGTTTTATAGCCATTTACATTCTAAATTGTTAGGAATGGTAATG
TTACCTCCAAAACATTTGGAATTTTCTCAGAGGGATGGGACATTTTTATAGCTATTTATAGAACTTGTGTGATTGTTCTTTTTATCTTTGAATGTTGTCATATACTTCATACACATGATTATACACTTCATGCAAAATCAACTTTTGCTTTCTAAATGCTGCATGATGGTTTCTATTGAAAGAATTGATATCAAATTAGT
TAATAAAAG

Intron 2 GTAAATTTAG ... GGATGCATAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	80.86	10.7	42	48
A2	81.89	9.3	48	36
A3	70.55	16.8	37	43
A4	65.98	11.5	20	23
A5	78.84	5.3	19	20
A6	73.19	89.8	214	275
A7	75.73	103.3	312	328
A8	72.91	146.2	387.2	392
A9	72.6	122.7	318	325
A10	72.69	100.3	270	258

>TRINITY_DN119472_c0_g3_i1 from sample A1 / Example spliced isoform

GGAGGCTACATCAAGTTGTTAGGGAAATTGGAAACTACACCAGATATCTGAGCAGATTATTACAGGAGAAATCAATGGAAATTCGTGTTGGTTGTTCTTGTTTTTCATTGTGTCTATTGTTGTAATATTGTTCCTGTTTCTGGGCTCCCCGTTGAATTTCTTATACTTTGATATGCAACTAATGCTGCTTGTCTCGAGCA
TCTTTGAAGACAATGAGTCAATCAACAGTATTTGCTGAGCTGGGAAGTTGCAGTGTGAATGGAAGTACTTGAAATATTGAGAATAGGCATAAAATGAAAAAATTATGGCACAGGCTTATCAAGATAAGATAGATAAGATAATTTTATTATTGTCCAACAAATGACCAAGTTTCCAGTGGTTCAGGTGTATATGGTATAGC
TGGTATCGATCGATACTGTTCATATTTCTGATTATTTAATCTGAAATGGCCTCAATTCTGAGGCCTTGTGTATAACCCATTTTGTTTCGGTTTATTAGGAATGCTGATGTTACATCCAAAACATGGGAGATATTCTCAGGAGGGATGGGACAGTTTTATAGCCATTTACATTCTAAATTGTTAGGAATGGTAATGTTACC
TCCAAAACATTTGGAATTTTCTCAGAGGGATGGGACATTTTTATAGCTATTTATAGAACTTGTGTG

>TRINITY_DN119472_c0_g3_i2 from sample A1 / Example unspliced isoform:

TTTGGATATACGACAGAAAGAGATTTGGTGGCAAATCCAAGTTGCCCATGCGGGGCTCTCCTTGCAAATCATTTGTTACATGGTCACCGTCGTCGAGTAAGTTGTGAATAAATTTGCTCAATGTGTGGGCTTCAACTTCGCTCACCGATTTAATTTGGGAGAAGATTTAGGCACAGCGTGTATACCCAATAAATAATAAA
AATAGAAACTTGATTCATCGTAGCAGATTCCCCAAGAGGGCTGCTTGCCCTCTCTAAACTCGTCTGCCCGAGTGCAGTGGGTGGAGTGCATACAAAGTATTTGGGTAAATTGCATGTGGAATGTTCAGTTATCAGTGCATTCTAAACTCAGAATCATGGCGAGAGATTACGGTGAAGACTGGGGAGAAGCTATGAGAATG
TCAAGCATGACATGCATTTCGTGCAAAGACGAGTATACCACAAGTTCCGCAGGTACCTGCAGAGAGTGCTACGAGGAGGCGAGCGAGACAGAGGAGGAACTCAAGAAGGAAATTGAGGAGCTCAAATCCAGAATTGTATTCCTCAAGATGTGGGCACCAGAGGCCATGCTAGATGATTACACCGATGTCAGTCTTCAACT
GCCCGATGGCTCCAAGATCAAGGCTCACAGGGCTGTTTTGATTAGTAAGTCGCCGGTTTTCAAGGCAATGCTAGAGAATGAAATGGAGGAGAACAGAACTCGTACAATAAAGATTACAGATTTTAGCTATGAAGTTCTCCGCTCATTTGTACATTACCTATACACAGCTGAAACTTTTCCAGATGAGCAGATGGCTTATG
ATCTGTTGGTTCTAGCAGAAAAATATCAGGTGAAGCACCTGCGAAATGTTTGTGAAAAGTTTATCACATCAAGAGTGAATAATGACAATGCAATTATGAGCTTTGCTTTTGCTCATCAGCATAATGCGAAGCATCTTCGAGAGGCTGCGTTGTCCTTAATTATTGAGAACATGCACACCTTGACAACAAGGGAAGAGTAT
CATGAGTTGGTTGACAAGGATCCAAGATTGGTGGTGGAGATCTACGAAGCCTATCTAGCCAAACAAGTCAATACTGCCGCAAAGGAGGCTACATCAAGTTGTTAGgtaaatttagttccatctgtcaatgttgatttgtgggtgcatatgaaaagttcattagttgatttcctgttggatgcatagGGAAATTGGAAACT
AGACCAGATATCTGAGCAGATTATTACAGGAGAAATCAATGGAAATTCGTGTTGGTTGTTCTTGTTTTTCATTGTGTCTATTGTTGTAATATTGTTCCTGTTTCTGGGCTCCCCGTTGAATTTCTTATACTTTGATATGCAACTAATGCTGCTTGTCTCGAGCATCTTTGAAGACAATGAGTCAATCAACAGTATTTGCT
GAGCTGGGAAGTTGCAGTGTGAATGGAAGTACTTGAAATATTGAGAATAGGCATAAAATGAAAAAATTATGGCACAGGCTTATCAAGATAAGATAGATAAGATAATTTTATTATTGTCCAACAAATGACCAAGTTTCCAGTGGTTCAGGTGTATATGGTATAGCTGGTATCGATCGATACTGTTCATATTTCTGATTATT
TAATCTGAAATGGCCTCAATTCTGAGGCCTTGTGTATAACCCATTTTGTTTCGGTTTATTAGGAATGCTGATGTTACATCCAAAACATGGGAGATATTCTCAGGAGGGATGGGACAGTTTTATAGCCATTTACATTCTAAATTGTTAGGAATGGTAATGTTACCTCCAAAACATTTGGAATTTTCTCAGAGGGATGGGAC
ATTTTTATAGCTATTTATAGAACTTGTGTG