sp|Q5XEM9|ALFL5_ARATH ----> PHD finger protein ALFIN-LIKE 5
Intron 1 GTGAGAAGGA ... ACAAATCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 81.82 | 1 | 4 | 5 |
| A2 | 100 | 0 | 3 | 3 |
| A3 | 100 | 0 | 1 | 1 |
| A4 | 100 | 0 | 2 | 1 |
| A5 | 100 | 0 | 1 | 1 |
| A6 | 89.66 | 3 | 24 | 28 |
| A7 | 76.74 | 5 | 17 | 16 |
| A8 | 100 | 0 | 14 | 13 |
| A9 | 92.31 | 1 | 13 | 11 |
| A10 | 100 | 0 | 5 | 5 |
>TRINITY_DN46902_c0_g3_i13 from sample A7 / Example spliced isoformCAAGGAGAAAGAAATGAAAAAAATAAATTATAAATATGGGCTTATCGCTGAAAAAGCCGAGAAGTAACTTGGGTTCAAAGGCAGACGGAACTCGTTTTATTTGCGATCAATCATCAGTCAATCCGTGCGTACATCGTTTTACATTTTTGAAACCCTCTTTGGGTCTGTGTTCTCTCCCAGAGATAACTACGACGAGGGAT
TGCGAACGAAAGGTTTGAAATCTCTACCTGTCCGCCATGATTGATCTGTTCTCGTACCGCTGCCTGTGAATTCACAGCTTGTAGTTTCCGGAGGATGCTTTTTTGCGATTCGAACCTTGGGCTACTCGCGTATCATTCTTTTATTTTCTCGCAGAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATC
GACAAGTAAAATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAAGCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAGGACAATCTATGTCTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAG
AAGAGGTACCTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGAAAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACGATTTGGTTTTGACAAAAATGATCGATAAAATGGTAATTTTCTAGCCTTATCTAGGAGC
ATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAAGTTGCCAGCGATTATCACAATTGAGGTATACGGATGAAAACGTTTC
ATCATTCGACATTATAAAGGAATGTGTTCTCTGGAGCTCCAAACCAAAATATGAAAGATATATTTATGATTTTGAGGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAGTATATCTATGTCTCCAAGCACGACATATAAG
GTTAGTCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCCAGGGCATAGGCTGATTAACTTTAATAAAAATGGTTTTTATTTATTTTATTTTTTAAAAAAAAA
>TRINITY_DN46902_c0_g3_i4 from sample A7 / Example unspliced isoform:GTGTATGACTATTTGAAAGTCTGAATGTCATAACTTTGATAATTACTTGAAACAGCCATTCTATCGATTCATTTTACCCTGTGAATTATTTAATCCATCTCTGTTTAGTTACTGTCTACTTGGTTGTATATCCAGTGCTCATTCCATTAGCAATCACTTCTGAACAAAGAAGCTACTGAGCTGCCCTAGTTGAGAAATTG
CGGTCTAGTTTAATATTGATTATATTCTTGAAATCAAATAGCTGAAATGATCAGCATTTTTGCTTTTGGCAAGGTTTTATGTAAATTAATTGTATTGCACTTATATTGCAGATAAAATGGTAATTTTCTAGCCTTATCTAGGAGCATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACA
GCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAAGTTGCCAGCGATTATCACAATTGAGGTATACGGATGAAAACGTTTCATCATTCGACATTATAAAGGAATGTGTTCTCTGGAGCTCCAAACCAAAATATGAA
AGATATATTTATGATTTTGAGgtgagaaggattctcatctcgacaaatccagGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAGTGAGCAGTTGAATTAGAGGTATATCTATGTCTCCAAGCACGACATATAAGGTTAG
TCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCCAGGGCATAGGCTGATTAACTTTAATAAAAATGGTTTTTATTTATTTTATTTTTTAAAAAAAAA
Intron 2 GTGAGCAGTT ... TTACTCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70.87 | 2.4 | 8 | 3 |
| A2 | 71.43 | 2 | 4 | 6 |
| A3 | 96.64 | 0.1 | 1 | 4 |
| A4 | 100 | 0 | 5 | 2 |
| A5 | 100 | 0 | 1 | 0 |
| A6 | 45.6 | 11.9 | 9 | 10.8 |
| A7 | 45.71 | 7 | 6 | 5.8 |
| A8 | 52.79 | 10.6 | 5 | 18.8 |
| A9 | 53.7 | 7.4 | 4 | 13 |
| A10 | 60 | 4 | 7 | 5 |
>TRINITY_DN39612_c1_g1_i11 from sample A6 / Example spliced isoformTAAAATGGTAATTTTCTAGCCTTATCTAGGAGCATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAAGTTGCCAGCGATT
ATCACAATTGAGATAAGTGTTACTGATAGTTGTATCCAAAATTTGAACTTCGAAGATATTTCTGATACATTATTCATCCCTTTGATGCATTTACTATTAAGCCATACATGAGGTAAGTCGTTTACCGATAAAAATCAGGTGGCCTGCTATCAGGTATACGGATGAAAACGTTTCATCATTCGACATTATAAAGGAATGTG
TTCTCTGGAGCTCCAAACCAAAATATGAAAGATATATTTATGATTTTGAGGTGAGAAGGATTCTCATCTCGACAAATCCAGGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAGTATATCTATGTCTCCAAGCACGACAT
ATAAGGTTAGTCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCCAGGGCATAGGCTGG
>TRINITY_DN39612_c1_g1_i6 from sample A6 / Example unspliced isoform:AAAGAAATGAAAAAAATAAATTATAAATATGGGCTTATCGCTGAAAAAGCCGAGAAGTAACTTGGGTTCAAAGGCAGACGGAACTCGTTTTATTTGCGATCAATCATCAGTCAATCCGTGCGTACATCGTTTTACATTTTTGAAACCCTCTTTGGGTCTGTGTTCTCTCCCAGAGATAACTACGACGAGGGATTGCGAAC
GAAAGAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATCGACAAGTAAAATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAAGCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAGGACAATC
TATGTCTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAGAAGAGGTACCTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGAAAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACGATTTGGT
TTTGACAAAAATGATCGAAAGCGACTTTTTAACATGATGAATGAACTTCCAACAATATACGAGGTTGTTACTGGAACTGCAAAGAAGCAAATAAAAGAAAGATCTACAGTCACCAACAACAGCAGTAGCAAAAACAAGTCAGGAGGGAAAGTGCGGTCATCCGAATCTCAACCAAAAATGTCAAAGTTACCGCTATCCAA
GGATGAGGAAGACATCTTAGATGAAGAGGAGGATGATGAACATGGGGAGACACTATGTGGAGCCTGTGGTGGAGTTTATTCCTCTGCAACTGCGGAATTTTGGATTGCATGTGATATGTGTGAGAATTGGTTCCATGGCAAATGTGTGAAGATCACTCCTGCAAGAGCTGAACACATTAAACAATACAAATGTCCATCCT
GCAGTAATAATAAAAGAGTCCGTGTTTAACTACAAGCAAAATTTACCTCTGATGTTTCATAGAAAATTGTGGCTTCAACTATAAAAGTGTTTGGAGGCACTGGAGCTTTGTTTCTTGCAATTGAGGTTGATGATTAAGGCAGGCTGAGGCATGGTGTGACCTTTTGAGATAAAATGGTAATTTTCTAGCCTTATCTAGGA
GCATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAAGTTGCCAGCGATTATCACAATTGAGATAAGTGTTACTGATAGTT
GTATCCAAAATTTGAACTTCGAAGATATTTCTGATACATTATTCATCCCTTTGATGCATTTACTATTAAGCCATACATGAGGTAAGTCGTTTACCGATAAAAATCAGGTGGCCTGCTATCAGGTATACGGATGAAAACGTTTCATCATTCGACATTATAAAGGAATGTGTTCTCTGGAGCTCCAAACCAAAATATGAAAG
ATATATTTATGATTTTGAGGTGAGAAGGATTCTCATCTCGACAAATCCAGGTTAATCCTGAACGCAGAAGTTGTATGTTTGTTTCAAATTCAAGGAAAATTTCAAAAGCTGTTTATTCTTTAGAAGCACTTCGAGAATCTGTATGCCTATGAATTTTCCTGGCTTAAGTATTTTTGCTCAGTGCATATGAATTTTCCTGG
CTTAAGTTTTTTTGTTCAGTGCATATGAATTTTTTACAGAGTATGTTTTCCATCAAGCTGCAATTTGATGACCCGAGGATGAGTACTTGGAAAAGTGAAATGGTAGGTAAAATATAAAAGAATGTTTTACAGCATTACCTCTTGACATCCAATCCAATGTGTTCCAATCTCTTTACATCCTATCCAATGTGAACTCTCTC
TTTGAAACCAGAAACAAGTATATTAATTAATTTATAAACATTACATGCCCCCCCAGCTATACCTTCATCATACAAAACCAGTGCAACAAAGTCCACTCTGTAGCTAACTATGAACACAGATTTTTGTCACTGTTTTCTGAAATTCGCTAAGGTCCCTAATTTCGGGAACCGACATATCCGATATAAGCTCTTTTATTGAA
TTCCACATGCTTAATAGAGGCTGTAATCTTTGTTCAACATAGAAGCCACTGGCATGAACGCTGTGTATTGAGAGTGCTACAAAGAGTTATAGGAAAAACATTTGTTTTGTTACAGGTATTGTTTTTCTTTATTATGGCTGCTCTGTAGCCACGACTGTTGTTTTATGTCGGTGGACTTTTGTATGCTATTTGTTTGGAGA
CGACGGGCCGCTGGACTTCTGTATGTTATTTGTTTTGGATACCTTGGGCCGCTGGACCTCGTATTCTGCCCACATCCAAAATCTAAATCACTGCAATTTTCAATGTATAAGATGCAAGCTATATGTAGAAGAGAAATATTCCATGGTATCTAACTTTTCAGGTTAGATGTTGCTACAGTTATTGATACCATTACATATGT
AAATTAATTAGGTGTTCCAAAAGAGAGCTACATGGCCTTTCTAGTTTTTATGAAAAATAACCGACAGTGCACTGGGCGGCATAAGTGCACTGGGCGGCATTAAGGCAAACCATTCGTTCAGATGAAATCACGGAGAGATTATATTTCTGGTGTGCTTAGTGAAAAGCAGATTCAGTATAGGTGTTTGATTGTGTAAAAGT
TGTCAAAATGAATAGGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAgtgagcagttgaattagaggtttgtcaaattttgtttttatttttttagtttacggcgatatcggtcggtagggttggggttgtacttgtgta
acatgaggttgaatctggtttatttttactcacagGTATATCTATGTCTCCAAGCACGACATATAAGGTTAGTCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCCAGGGCATAGGCTGG
Intron 3 GTGAGTTCTC ... GTTTCAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.56 | 47 | 20 | 14 |
| A2 | 22.76 | 56 | 16 | 17 |
| A3 | 25.42 | 44 | 9 | 21 |
| A4 | 25 | 24 | 3 | 13 |
| A5 | 31.25 | 11 | 5 | 5 |
| A6 | 24.82 | 103 | 16 | 52 |
| A7 | 22.87 | 145 | 16 | 70 |
| A8 | 19.02 | 198 | 26 | 67 |
| A9 | 19.91 | 175 | 23 | 64 |
| A10 | 20.91 | 157 | 19 | 64 |
>TRINITY_DN119836_c1_g2_i4 from sample A1 / Example spliced isoformCTTGGGTTCAAAGGCAGACGGAACTCGTTTTATTTGCGATCAATCATCAGTCAATCCGTGCGTACATCGTTTTACATTTTTGAAACCCTCTTTGGGTCTGTGTTCTCTCCCAGAGATAACTACGACGAGGGATTGCGAACGAAAGGTTTGAAATCTCTACCTGTCCGCCATGATTGATCTGTTCTCGTACCGCTGCCTGT
GAATTCACAGCTTGTAGTTTCCGGAGGATGCTTTTTTGCGATTCGAACCTTGGGCTACTCGCGTATCATTCTTTTATTTTCTCGCAGAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATCGACAAGTAAAATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAA
GCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAGGACAATCTATGTCTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAGAAGAGGTACCTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGA
AAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACGATTTGGTTTTGACAAAAATGATCGAAAGCGACTTTTTAACATGATGAATGAACTTCCAACAATATACGAGGTTGTTACTGGAACTGCAAAGAAGCAAATAAAAGAAAGATCTACAGTCACCAACA
ACAGCAGTAGCAAAAACAAGTCAGGAGGGAAAGTGCGGTCATCCGAATCTCAACCAAAAATGTCAAAGTTACCGCTATCCAAGGATGAGGAAGACATCTTAGATGAAGAGGAGGATGATGAACATGGGGAGACACTATGTGGAGCCTGTGGTGGAGTTTATTCCTCTGCAACTGCGGAATTTTGGATTGCATGTGATATG
TGTGAGAATTGGTTCCATGGCAAATGTGTGAAGATCACTCCTGCAAGAGCTGAACACATTAAACAATACAAATGTCCATCCTGCAGTAATAATAAAAGAGTCCGTGTTTAACTACAAGCAAAATTTACCTCTGATGTTTCATAGAAAATTGTGGCTTCAACTATAAAAGTGTTTGGAGGCACTGGAGCTTTGTTTCTTGC
AATTGAGGTTGATGATTAAGGCAGGCTGAGGCATGGTGTGACCTTTTGAGGTCAGATAGACACAGATGCAACATTCATATGCATGCTGAGCTAGTTACTTGTTTGTTTTCCTGATCGTAAGACAGCAATTATAATCTGTAGGACTTCAAAAGTTTTGATAGCTATCTATTCAAAGTTATACACCTGCTTTTGAAACCTTT
GGGACAGCATGAAGAAATACAGCTGTATGCATATTGGGTTGGTTGCTTGTTATTTCTTAATACTCATTGTAAAACACAACAGTTTCAATCCTTCGAGGGTTTGATGTTGAATGGGGTAACTTTTGTTAACCAGAGTAGCCATCTTGGACATACAGTGTTTAATTTTTTAGCATGCCATGCTCAATATGCTATTCACTTGT
CTTGAGAAGTCTATATTATTTTTGGCCATTATGGTATGTGCTTAGTAATAAGTGTATGTATTGTAGTGTAAGCTTTGTTTATGATGGATGTGCATTAAGTTTGCTCACTATATATTGTGGCTGCTTATATTTTAAAGCTTTTAGTTGAAGTTTTGTTATTGTGCACTATGTTGTGTGGCGGCTGAGATTCTAATGCTTTA
AGTCGAAGTTTTGTTACCAGAATTTAAGTACTTTAATGCCAAATTTTGTATTGGCTTATTATCGAATTTTGTTTATGTTTTGGTGATTCAATGACTGTCATAGGTCT
>TRINITY_DN119836_c1_g2_i1 from sample A1 / Example unspliced isoform:CTCAAGTCTGAACACCTAAACCCTTGATCATTTCCCAGTATGTAGTGCATGCCTACAAACCATTTAAGGTGACATTGTTATCTATTTTAAATTTTGCAATCTAGAAAACATTGGGCATCATACACAATCTGGTGACATGGATTTTTTACACAACTACATTTGAAAACATGGAAAACTGCCATTAAATGTTTAGACTAAAA
AAAGAAGAAAAATCAATCCTGACAGGAATTCTGCCTGCAAACTGAACCATGGAACTAGAGAGCTGGAAGAAGAACATCAAATATTTTGCACAAATGAAACAGAGAGCAACATTTAAATTTAGGTTAGCAAAATAGTCTGCAGTAATTTGTGCAAACATCAACCAGATGCAGGGTGATGGCTGAAGGTGCAGTAAATGAGT
TTGCAAAAAAAGAGGAAGATGAATTCTAAAGGCTGGACAAATATTTAGATGAATTTTGCCATAGGTTTATTTGAAGTCTGAATGAAATTGGTCTGCTGATGACAGAAAGCGACTTTTTAACATGATGAATGAACTTCCAACAATATACGAGGTTGTTACTGGAACTGCAAAGAAGCAAATAAAAGAAAGATCTACAGTCA
CCAACAACAGCAGTAGCAAAAACAAGTCAGGAGGGAAAGTGgtgagttctcatggactagtacattttttttcaattacaaccaggactgatgatgctgtattatattgtctgaaggtattttctataggttttaagttgtacaatatgctcatatactgaattaattttggtttcaacagCGGTCATCCGAATCTCAAC
CAAAAATGTCAAAGTTACCGCTATCCAAGGATGAGGAAGACATCTTAGATGAAGAGGAGGATGATGAACATGGGGAGACACTATGTGGAGCCTGTGGTGGAGTTTATTCCTCTGCAACTGCGGAATTTTGGATTGCATGTGATATGTGTGAGAATTGGTTCCATGGCAAATGTGTGAAGATCACTCCTGCAAGAGCTGAA
CACATTAAACAATACAAATGTCCATCCTGCAGTAATAATAAAAGAGTCCGTGTTTAACTACAAGCAAAATTTACCTCTGATGTTTCATAGAAAATTGTGGCTTCAACTATAAAAGTGTTTGGAGGCACTGGAGCTTTGTTTCTTGCAATTGAGGTTGATGATTAAGGCAGGCTGAGGCATGGTGTGACCTTTTGAGGTCA
GATAGACACAGATGCAACATTCATATGCATGCTGAGCTAGTTACTTGTTTGTTTTCCTGATCGTAAGACAGCAATTATAATCTGTAGGACTTCAAAAGTTTTGATAGCTATCTATTCAAAGTTATACACCTGCTTTTGAAACCTTTGGGACAGCATGAAGAAATACAGCTGTATGCATATTGGGTTGGTTGCTTGTTATT
TCTTAATACTCATTGTAAAACACAACAGTTTCAATCCTTCGAGGGTTTGATGTTGAATGGGGTAACTTTTGTTAACCAGAGTAGCCATCTTGGACATACAGTGTTTAATTTTTTAGCATGCCATGCTCAATATGCTATTCACTTGTCTTGAGAAGTCTATATTATTTTTGGCCATTATGGTATGTGCTTAGTAATAAGTG
TATGTATTGTAGTGTAAGCTTTGTTTATGATGGATGTGCATTAAGTTTGCTCACTATATATTGTGGCTGCTTATATTTTAAAGCTTTTAGTTGAAGTTTTGTTATTGTGCACTATGTTGTGTGGCGGCTGAGATTCTAATGCTTTAAGTCGAAGTTTTGTTACCAGAATTTAAGTACTTTAATGCCAAATTTTGTATTGG
CTTATTATCGAATTTTGTTTATGTTTTGGTGATTCAATGACTGTCATAGGTCT
Intron 4 GTTTGAAATC ... TTTCTCGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 48.5 | 60.8 | 61.6 | 53 |
| A2 | 48.08 | 73.1 | 84.8 | 50 |
| A3 | 51.93 | 53.6 | 71.5 | 44 |
| A4 | 50.36 | 62.5 | 80.5 | 46 |
| A5 | 41.58 | 43.5 | 35.8 | 26 |
| A6 | 39.77 | 102.1 | 79.8 | 55 |
| A7 | 40.62 | 152.7 | 116.9 | 92 |
| A8 | 40.15 | 104.4 | 85 | 55 |
| A9 | 42.21 | 166.4 | 135.9 | 107 |
| A10 | 39.56 | 203.9 | 175.8 | 91 |
>TRINITY_DN119836_c1_g2_i2 from sample A1 / Example spliced isoformCTTGGGTTCAAAGGCAGACGGAACTCGTTTTATTTGCGATCAATCATCAGTCAATCCGTGCGTACATCGTTTTACATTTTTGAAACCCTCTTTGGGTCTGTGTTCTCTCCCAGAGATAACTACGACGAGGGATTGCGAACGAAAGAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATCGACAAGTAA
AATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAAGCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAGGACAATCTATGTCTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAGAAGAGGTAC
CTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGAAAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACGATTTGGTTTTGACAAAAATGATCGAAAGCGACTTTTTAACATGATGAATGAACTTCCAACAATATAC
GAGGTTGTTACTGGAACTGCAAAGAAGCAAATAAAAGAAAGATCTACAGTCACCAACAACAGCAGTAGCAAAAACAAGTCAGGAGGGAAAGTGCGGTCATCCGAATCTCAACCAAAAATGTCAAAGTTACCGCTATCCAAGGATGAGGAAGACATCTTAGATGAAGAGGAGGATGATGAACATGGGGAGACACTATGTGG
AGCCTGTGGTGGAGTTTATTCCTCTGCAACTGCGGAATTTTGGATTGCATGTGATATGTGTGAGAATTGGTTCCATGGCAAATGTGTGAAGATCACTCCTGCAAGAGCTGAACACATTAAACAATACAAATGTCCATCCTGCAGTAATAATAAAAGAGTCCGTGTTTAACTACAAGCAAAATTTACCTCTGATGTTTCAT
AGAAAATTGTGGCTTCAACTATAAAAGTGTTTGGAGGCACTGGAGCTTTGTTTCTTGCAATTGAGGTTGATGATTAAGGCAGGCTGAGGCATGGTGTGACCTTTTGAGGTCAGATAGACACAGATGCAACATTCATATGCATGCTGAGCTAGTTACTTGTTTGTTTTCCTGATCGTAAGACAGCAATTATAATCTGTAGG
ACTTCAAAAGTTTTGATAGCTATCTATTCAAAGTTATACACCTGCTTTTGAAACCTTTGGGACAGCATGAAGAAATACAGCTGTATGCATATTGGGTTGGTTGCTTGTTATTTCTTAATACTCATTGTAAAACACAACAGTTTCAATCCTTCGAGGGTTTGATGTTGAATGGGGTAACTTTTGTTAACCAGAGTAGCCAT
CTTGGACATACAGTGTTTAATTTTTTAGCATGCCATGCTCAATATGCTATTCACTTGTCTTGAGAAGTCTATATTATTTTTGGCCATTATGGTATGTGCTTAGTAATAAGTGTATGTATTGTAGTGTAAGCTTTGTTTATGATGGATGTGCATTAAGTTTGCTCACTATATATTGTGGCTGCTTATATTTTAAAGCTTTT
AGTTGAAGTTTTGTTATTGTGCACTATGTTGTGTGGCGGCTGAGATTCTAATGCTTTAAGTCGAAGTTTTGTTACCAGAATTTAAGTACTTTAATGCCAAATTTTGTATTGGCTTATTATCGAATTTTGTTTATGTTTTGGTGATTCAATGACTGTCATAGGTCT
>TRINITY_DN119836_c1_g2_i5 from sample A1 / Example unspliced isoform:CTTGGGTTCAAAGGCAGACGGAACTCGTTTTATTTGCGATCAATCATCAGTCAATCCGTGCGTACATCGTTTTACATTTTTGAAACCCTCTTTGGGTCTGTGTTCTCTCCCAGAGATAACTACGACGAGGGATTGCGAACGAAAGgtttgaaatctctacctgtccgccatgattgatctgttctcgtaccgctgcctgt
gaattcacagcttgtagtttccggaggatgcttttttgcgattcgaaccttgggctactcgcgtatcattcttttattttctcgcagAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATCGACAAGTAAAATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAA
GCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAGGACAATCTATGTCTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAGAAGAGGTACCTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGA
AAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACGATTTGGTTTTGACAAAAATGATCGATAAAATGGTAATTTTCTAGCCTTATCTAGGAGCATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCT
GCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAAGTTGCCAGCGATTATCACAATTGAGATAAGTGTTACTGATAGTTGTATCCAAAATTTGAACTTCGAAGATATTTCTGATACATTATTCATCCCTTTGATGCATTTACTATTAA
GCCATACATGAGGTAAGTCGTTTACCGATAAAAATCAGGTGGCCTGCTATCAGGTATACGGATGAAAACGTTTCATCATTCGACATTATAAAGGAATGTGTTCTCTGGAGCTCCAAACCAAAATATGAAAGATATATTTATGATTTTGAGGTGAGAAGGATTCTCATCTCGACAAATCCAGGTTAATCCTGAACGCAGAA
GTTGTATGTTTGTTTCAAATTCAAGGAAAATTTCAAAAGCTGTTTATTCTTTAGAAGCACTTCGAGAATCTGTATGCCTATGAATTTTCCTGGCTTAAGTATTTTTGCTCAGTGCATATGAATTTTCCTGGCTTAAGTTTTTTTGTTCAGTGCATATGAATTTTTTACAGAGTATGTTTTCCATCAAGCTGCAATTTGAT
GACCCGAGGATGAGTACTTGGAAAAGTGAAATGGTAGGTAAAATATAAAAGAATGTTTTACAGCATTACCTCTTGACATCCAATCCAATGTGTTCCAATCTCTTTACATCCTATCCAATGTGAACTCTCTCTTTGAAACCAGAAACAAGTATATTAATTAATTTATAAACATTACATGCCCCCCCAGCTATACCTTCATC
ATACAAAACCAGTGCAACAAAGTCCACTCTGTAGCTAACTATGAACACAGATTTTTGTCACTGTTTTCTGAAATTCGCTAAGGTCCCTAATTTCGGGAACCGACATATCCGATATAAGCTCTTTTATTGAATTCCACATGCTTAATAGAGGCTGTAATCTTTGTTCAACATAGAAGCCACTGGCATGAACGCTGTGTATT
GAG
Intron 5 GTTAATCCTG ... AAATGAATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 58.33 | 5 | 7 | 6.2 |
| A2 | 78.57 | 3 | 11 | 2 |
| A3 | 83.33 | 1 | 5 | 3 |
| A4 | 80 | 1 | 4 | 1.8 |
| A5 | 50 | 1 | 1 | 3 |
| A6 | 60.88 | 26.4 | 41 | 8.4 |
| A7 | 64.13 | 16.8 | 30 | 9 |
| A8 | 77.35 | 12.6 | 43 | 5.9 |
| A9 | 67.65 | 11 | 23 | 8 |
| A10 | 79.17 | 5 | 19 | 11.4 |
>TRINITY_DN39612_c1_g1_i11 from sample A6 / Example spliced isoformTAAAATGGTAATTTTCTAGCCTTATCTAGGAGCATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAAGTTGCCAGCGATT
ATCACAATTGAGATAAGTGTTACTGATAGTTGTATCCAAAATTTGAACTTCGAAGATATTTCTGATACATTATTCATCCCTTTGATGCATTTACTATTAAGCCATACATGAGGTAAGTCGTTTACCGATAAAAATCAGGTGGCCTGCTATCAGGTATACGGATGAAAACGTTTCATCATTCGACATTATAAAGGAATGTG
TTCTCTGGAGCTCCAAACCAAAATATGAAAGATATATTTATGATTTTGAGGTGAGAAGGATTCTCATCTCGACAAATCCAGGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAGTATATCTATGTCTCCAAGCACGACAT
ATAAGGTTAGTCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCCAGGGCATAGGCTGG
>TRINITY_DN39612_c1_g1_i6 from sample A6 / Example unspliced isoform:AAAGAAATGAAAAAAATAAATTATAAATATGGGCTTATCGCTGAAAAAGCCGAGAAGTAACTTGGGTTCAAAGGCAGACGGAACTCGTTTTATTTGCGATCAATCATCAGTCAATCCGTGCGTACATCGTTTTACATTTTTGAAACCCTCTTTGGGTCTGTGTTCTCTCCCAGAGATAACTACGACGAGGGATTGCGAAC
GAAAGAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATCGACAAGTAAAATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAAGCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAGGACAATC
TATGTCTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAGAAGAGGTACCTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGAAAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACGATTTGGT
TTTGACAAAAATGATCGAAAGCGACTTTTTAACATGATGAATGAACTTCCAACAATATACGAGGTTGTTACTGGAACTGCAAAGAAGCAAATAAAAGAAAGATCTACAGTCACCAACAACAGCAGTAGCAAAAACAAGTCAGGAGGGAAAGTGCGGTCATCCGAATCTCAACCAAAAATGTCAAAGTTACCGCTATCCAA
GGATGAGGAAGACATCTTAGATGAAGAGGAGGATGATGAACATGGGGAGACACTATGTGGAGCCTGTGGTGGAGTTTATTCCTCTGCAACTGCGGAATTTTGGATTGCATGTGATATGTGTGAGAATTGGTTCCATGGCAAATGTGTGAAGATCACTCCTGCAAGAGCTGAACACATTAAACAATACAAATGTCCATCCT
GCAGTAATAATAAAAGAGTCCGTGTTTAACTACAAGCAAAATTTACCTCTGATGTTTCATAGAAAATTGTGGCTTCAACTATAAAAGTGTTTGGAGGCACTGGAGCTTTGTTTCTTGCAATTGAGGTTGATGATTAAGGCAGGCTGAGGCATGGTGTGACCTTTTGAGATAAAATGGTAATTTTCTAGCCTTATCTAGGA
GCATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAAGTTGCCAGCGATTATCACAATTGAGATAAGTGTTACTGATAGTT
GTATCCAAAATTTGAACTTCGAAGATATTTCTGATACATTATTCATCCCTTTGATGCATTTACTATTAAGCCATACATGAGGTAAGTCGTTTACCGATAAAAATCAGGTGGCCTGCTATCAGGTATACGGATGAAAACGTTTCATCATTCGACATTATAAAGGAATGTGTTCTCTGGAGCTCCAAACCAAAATATGAAAG
ATATATTTATGATTTTGAGGTGAGAAGGATTCTCATCTCGACAAATCCAGgttaatcctgaacgcagaagttgtatgtttgtttcaaattcaaggaaaatttcaaaagctgtttattctttagaagcacttcgagaatctgtatgcctatgaattttcctggcttaagtatttttgctcagtgcatatgaattttcctgg
cttaagtttttttgttcagtgcatatgaattttttacagagtatgttttccatcaagctgcaatttgatgacccgaggatgagtacttggaaaagtgaaatggtaggtaaaatataaaagaatgttttacagcattacctcttgacatccaatccaatgtgttccaatctctttacatcctatccaatgtgaactctctc
tttgaaaccagaaacaagtatattaattaatttataaacattacatgcccccccagctataccttcatcatacaaaaccagtgcaacaaagtccactctgtagctaactatgaacacagatttttgtcactgttttctgaaattcgctaaggtccctaatttcgggaaccgacatatccgatataagctcttttattgaa
ttccacatgcttaatagaggctgtaatctttgttcaacatagaagccactggcatgaacgctgtgtattgagagtgctacaaagagttataggaaaaacatttgttttgttacaggtattgtttttctttattatggctgctctgtagccacgactgttgttttatgtcggtggacttttgtatgctatttgtttggaga
cgacgggccgctggacttctgtatgttatttgttttggataccttgggccgctggacctcgtattctgcccacatccaaaatctaaatcactgcaattttcaatgtataagatgcaagctatatgtagaagagaaatattccatggtatctaacttttcaggttagatgttgctacagttattgataccattacatatgt
aaattaattaggtgttccaaaagagagctacatggcctttctagtttttatgaaaaataaccgacagtgcactgggcggcataagtgcactgggcggcattaaggcaaaccattcgttcagatgaaatcacggagagattatatttctggtgtgcttagtgaaaagcagattcagtataggtgtttgattgtgtaaaagt
tgtcaaaatgaatagGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAGTGAGCAGTTGAATTAGAGGTTTGTCAAATTTTGTTTTTATTTTTTTAGTTTACGGCGATATCGGTCGGTAGGGTTGGGGTTGTACTTGTGTA
ACATGAGGTTGAATCTGGTTTATTTTTACTCACAGGTATATCTATGTCTCCAAGCACGACATATAAGGTTAGTCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCCAGGGCATAGGCTGG
Intron 6 GTGAGAAGGA ... AAATGAATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 69.15 | 3.3 | 8 | 6 |
| A2 | 100 | 0 | 7 | 2 |
| A3 | 100 | 0 | 2 | 3 |
| A4 | 76.33 | 1.5 | 7 | 2 |
| A5 | 100 | 0 | 1 | 3 |
| A6 | 81.42 | 5.3 | 38 | 8 |
| A7 | 68.75 | 8.1 | 26 | 9 |
| A8 | 91.45 | 2.3 | 42 | 6 |
| A9 | 80.82 | 3.3 | 19 | 8 |
| A10 | 100 | 0 | 15 | 12 |
>TRINITY_DN46902_c0_g3_i13 from sample A7 / Example spliced isoformCAAGGAGAAAGAAATGAAAAAAATAAATTATAAATATGGGCTTATCGCTGAAAAAGCCGAGAAGTAACTTGGGTTCAAAGGCAGACGGAACTCGTTTTATTTGCGATCAATCATCAGTCAATCCGTGCGTACATCGTTTTACATTTTTGAAACCCTCTTTGGGTCTGTGTTCTCTCCCAGAGATAACTACGACGAGGGAT
TGCGAACGAAAGGTTTGAAATCTCTACCTGTCCGCCATGATTGATCTGTTCTCGTACCGCTGCCTGTGAATTCACAGCTTGTAGTTTCCGGAGGATGCTTTTTTGCGATTCGAACCTTGGGCTACTCGCGTATCATTCTTTTATTTTCTCGCAGAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATC
GACAAGTAAAATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAAGCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAGGACAATCTATGTCTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAG
AAGAGGTACCTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGAAAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACGATTTGGTTTTGACAAAAATGATCGATAAAATGGTAATTTTCTAGCCTTATCTAGGAGC
ATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAAGTTGCCAGCGATTATCACAATTGAGGTATACGGATGAAAACGTTTC
ATCATTCGACATTATAAAGGAATGTGTTCTCTGGAGCTCCAAACCAAAATATGAAAGATATATTTATGATTTTGAGGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAGTATATCTATGTCTCCAAGCACGACATATAAG
GTTAGTCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCCAGGGCATAGGCTGATTAACTTTAATAAAAATGGTTTTTATTTATTTTATTTTTTAAAAAAAAA
>TRINITY_DN46902_c0_g3_i11 from sample A7 / Example unspliced isoform:CAAGGAGAAAGAAATGAAAAAAATAAATTATAAATATGGGCTTATCGCTGAAAAAGCCGAGAAGTAACTTGGGTTCAAAGGCAGACGGAACTCGTTTTATTTGCGATCAATCATCAGTCAATCCGTGCGTACATCGTTTTACATTTTTGAAACCCTCTTTGGGTCTGTGTTCTCTCCCAGAGATAACTACGACGAGGGAT
TGCGAACGAAAGAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATCGACAAGTAAAATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAAGCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAG
GACAATCTATGTCTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAGAAGAGGTACCTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGAAAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACG
ATTTGGTTTTGACAAAAATGATCGATAAAATGGTAATTTTCTAGCCTTATCTAGGAGCATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTC
CAGAGGTCAAAAGTTGCCAGCGATTATCACAATTGAGATAAGTGTTACTGATAGTTGTATCCAAAATTTGAACTTCGAAGATATTTCTGATACATTATTCATCCCTTTGATGCATTTACTATTAAGCCATACATGAGGTAAGTCGTTTACCGATAAAAATCAGGTGGCCTGCTATCAGGTATACGGATGAAAACGTTTCA
TCATTCGACATTATAAAGGAATGTGTTCTCTGGAGCTCCAAACCAAAATATGAAAGATATATTTATGATTTTGAGgtgagaaggattctcatctcgacaaatccaggttaatcctgaacgcagaagttgtatgtttgtttcaaattcaaggaaaatttcaaaagctgtttattctttagaagcacttcgagaatctgtat
gcctatgaattttcctggcttaagtatttttgctcagtgcatatgaattttcctggcttaagtttttttgttcagtgcatatgaattttttacagagtatgttttccatcaagctgcaatttgatgacccgaggatgagtacttggaaaagtgaaatggtaggtaaaatataaaagaatgttttacagcattacctcttg
acatccaatccaatgtgttccaatctctttacatcctatccaatgtgaactctctctttgaaaccagaaacaagtatattaattaatttataaacattacatgcccccccagctataccttcatcatacaaaaccagtgcaacaaagtccactctgtagctaactatgaacacagatttttgtcactgttttctgaaatt
cgctaaggtccctaatttcgggaaccgacatatccgatataagctcttttattgaattccacatgcttaatagaggctgtaatctttgttcaacatagaagccactggcatgaacgctgtgtattgagagtgctacaaagagttataggaaaaacatttgttttgttacaggtattgtttttctttattatggctgctct
gtagccacgactgttgttttatgtcggtggacttttgtatgctatttgtttggagacgacgggccgctggacttctgtatgttatttgttttggataccttgggccgctggacctcgtattctgcccacatccaaaatctaaatcactgcaattttcaatgtataagatgcaagctatatgtagaagagaaatattccat
ggtatctaacttttcaggttagatgttgctacagttattgataccattacatatgtaaattaattaggtgttccaaaagagagctacatggcctttctagtttttatgaaaaataaccgacagtgcactgggcggcataagtgcactgggcggcattaaggcaaaccattcgttcagatgaaatcacggagagattatat
ttctggtgtgcttagtgaaaagcagattcagtataggtgtttgattgtgtaaaagttgtcaaaatgaatagGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAGTGAGCAGTTGAATTAGAGGTTTGTCAAATTTTGTTT
TTATTTTTTTAGTTTACGGCGATATCGGTCGGTAGGGTTGGGGTTGTACTTGTGTAACATGAGGTTGAATCTGGTTTATTTTTACTCACAGGTATATCTATGTCTCCAAGCACGACATATAAGGTTAGTCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCC
AGGGCATAGGCTGATTAACTTTAATAAAAATGGTTTTTATTTATTTTATTTTTTAAAAAAAAA
Intron 7 GTTTGTCAAA ... TTACTCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 71.43 | 2 | 7 | 3 |
| A2 | 62.5 | 3 | 4 | 6 |
| A3 | 100 | 0 | 2 | 4 |
| A4 | 100 | 0 | 5 | 2 |
| A5 | 100 | 0 | 1 | 0 |
| A6 | 38.96 | 15.5 | 9 | 10.8 |
| A7 | 48.22 | 5.3 | 4 | 5.8 |
| A8 | 52.3 | 11.8 | 7 | 18.8 |
| A9 | 54.38 | 7.3 | 4 | 13 |
| A10 | 60 | 4 | 7 | 5 |
>TRINITY_DN39612_c1_g1_i8 from sample A6 / Example spliced isoformAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATCGACAAGTAAAATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAAGCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAGGACAATCTATGT
CTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAGAAGAGGTACCTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGAAAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACGATTTGGTTTTGA
CAAAAATGATCGATAAAATGGTAATTTTCTAGCCTTATCTAGGAGCATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAA
GTTGCCAGCGATTATCACAATTGAGATAAGTGTTACTGATAGTTGTATCCAAAATTTGAACTTCGAAGATATTTCTGATACATTATTCATCCCTTTGATGCATTTACTATTAAGCCATACATGAGGTAAGTCGTTTACCGATAAAAATCAGGTGGCCTGCTATCAGGTATACGGATGAAAACGTTTCATCATTCGACATT
ATAAAGGAATGTGTTCTCTGGAGCTCCAAACCAAAATATGAAAGATATATTTATGATTTTGAGGTGAGAAGGATTCTCATCTCGACAAATCCAGGTTAATCCTGAACGCAGAAGTTGTATGTTTGTTTCAAATTCAAGGAAAATTTCAAAAGCTGTTTATTCTTTAGAAGCACTTCGAGAATCTGTATGCCTATGAATTT
TCCTGGCTTAAGTATTTTTGCTCAGTGCATATGAATTTTCCTGGCTTAAGTTTTTTTGTTCAGTGCATATGAATTTTTTACAGAGTATGTTTTCCATCAAGCTGCAATTTGATGACCCGAGGATGAGTACTTGGAAAAGTGAAATGGTAGGTAAAATATAAAAGAATGTTTTACAGCATTACCTCTTGACATCCAATCCA
ATGTGTTCCAATCTCTTTACATCCTATCCAATGTGAACTCTCTCTTTGAAACCAGAAACAAGTATATTAATTAATTTATAAACATTACATGCCCCCCCAGCTATACCTTCATCATACAAAACCAGTGCAACAAAGTCCACTCTGTAGCTAACTATGAACACAGATTTTTGTCACTGTTTTCTGAAATTCGCTAAGGTCCC
TAATTTCGGGAACCGACATATCCGATATAAGCTCTTTTATTGAATTCCACATGCTTAATAGAGGCTGTAATCTTTGTTCAACATAGAAGCCACTGGCATGAACGCTGTGTATTGAGAGTGCTACAAAGAGTTATAGGAAAAACATTTGTTTTGTTACAGGTATTGTTTTTCTTTATTATGGCTGCTCTGTAGCCACGACT
GTTGTTTTATGTCGGTGGACTTTTGTATGCTATTTGTTTGGAGACGACGGGCCGCTGGACTTCTGTATGTTATTTGTTTTGGATACCTTGGGCCGCTGGACCTCGTATTCTGCCCACATCCAAAATCTAAATCACTGCAATTTTCAATGTATAAGATGCAAGCTATATGTAGAAGAGAAATATTCCATGGTATCTAACTT
TTCAGGTTAGATGTTGCTACAGTTATTGATACCATTACATATGTAAATTAATTAGGTGTTCCAAAAGAGAGCTACATGGCCTTTCTAGTTTTTATGAAAAATAACCGACAGTGCACTGGGCGGCATAAGTGCACTGGGCGGCATTAAGGCAAACCATTCGTTCAGATGAAATCACGGAGAGATTATATTTCTGGTGTGCT
TAGTGAAAAGCAGATTCAGTATAGGTGTTTGATTGTGTAAAAGTTGTCAAAATGAATAGGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAGTGAGCAGTTGAATTAGAGGTATATCTATGTCTCCAAGCACGACATATA
AGGTTAGTCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCCAGGGCATAGGCTGG
>TRINITY_DN39612_c1_g1_i6 from sample A6 / Example unspliced isoform:AAAGAAATGAAAAAAATAAATTATAAATATGGGCTTATCGCTGAAAAAGCCGAGAAGTAACTTGGGTTCAAAGGCAGACGGAACTCGTTTTATTTGCGATCAATCATCAGTCAATCCGTGCGTACATCGTTTTACATTTTTGAAACCCTCTTTGGGTCTGTGTTCTCTCCCAGAGATAACTACGACGAGGGATTGCGAAC
GAAAGAAGAAATTTAGGGCCAGAAAAGCCTCGTTAGGGTTTTCATAGCATCGACAAGTAAAATGGAAGGCAGTGGTTTCATTCGGCGCACTGTGGAGGACGTTTTCAAAGACTTCAAAGCACGTCGAGCTGGCTTGATCAAAGCCCTCACCACGGATGTAGAGGAGTTTTATCAGCAATGTGATCCAGAAAAGGACAATC
TATGTCTTTATGGATTTCCAAATGAAACATGGGAAGTTAATCTACCTGCAGAAGAGGTACCTCCTGAACTTCCTGAGCCAGCGCTGGGAATAAACTTTGCAAGAGATGGGATGCAAGAAAAGGATTGGCTATCACTGGTTGCTGTACACAGTGATTCCTGGCTACTTGCAGTTTCTGTCTATTTTGGTGCACGATTTGGT
TTTGACAAAAATGATCGAAAGCGACTTTTTAACATGATGAATGAACTTCCAACAATATACGAGGTTGTTACTGGAACTGCAAAGAAGCAAATAAAAGAAAGATCTACAGTCACCAACAACAGCAGTAGCAAAAACAAGTCAGGAGGGAAAGTGCGGTCATCCGAATCTCAACCAAAAATGTCAAAGTTACCGCTATCCAA
GGATGAGGAAGACATCTTAGATGAAGAGGAGGATGATGAACATGGGGAGACACTATGTGGAGCCTGTGGTGGAGTTTATTCCTCTGCAACTGCGGAATTTTGGATTGCATGTGATATGTGTGAGAATTGGTTCCATGGCAAATGTGTGAAGATCACTCCTGCAAGAGCTGAACACATTAAACAATACAAATGTCCATCCT
GCAGTAATAATAAAAGAGTCCGTGTTTAACTACAAGCAAAATTTACCTCTGATGTTTCATAGAAAATTGTGGCTTCAACTATAAAAGTGTTTGGAGGCACTGGAGCTTTGTTTCTTGCAATTGAGGTTGATGATTAAGGCAGGCTGAGGCATGGTGTGACCTTTTGAGATAAAATGGTAATTTTCTAGCCTTATCTAGGA
GCATGGAGCATCCATCATTTATGGTAGGGGAATATCTTTTCATACCAACAGGTAACAGCATATGCTGCTGCTCTCTGAAATGTGTTCAAGATGCAAGATTACTGTTTACAAGGGCAAGAAAATTCATACCAGGAAATTTTGCTCCAGAGGTCAAAAGTTGCCAGCGATTATCACAATTGAGATAAGTGTTACTGATAGTT
GTATCCAAAATTTGAACTTCGAAGATATTTCTGATACATTATTCATCCCTTTGATGCATTTACTATTAAGCCATACATGAGGTAAGTCGTTTACCGATAAAAATCAGGTGGCCTGCTATCAGGTATACGGATGAAAACGTTTCATCATTCGACATTATAAAGGAATGTGTTCTCTGGAGCTCCAAACCAAAATATGAAAG
ATATATTTATGATTTTGAGGTGAGAAGGATTCTCATCTCGACAAATCCAGGTTAATCCTGAACGCAGAAGTTGTATGTTTGTTTCAAATTCAAGGAAAATTTCAAAAGCTGTTTATTCTTTAGAAGCACTTCGAGAATCTGTATGCCTATGAATTTTCCTGGCTTAAGTATTTTTGCTCAGTGCATATGAATTTTCCTGG
CTTAAGTTTTTTTGTTCAGTGCATATGAATTTTTTACAGAGTATGTTTTCCATCAAGCTGCAATTTGATGACCCGAGGATGAGTACTTGGAAAAGTGAAATGGTAGGTAAAATATAAAAGAATGTTTTACAGCATTACCTCTTGACATCCAATCCAATGTGTTCCAATCTCTTTACATCCTATCCAATGTGAACTCTCTC
TTTGAAACCAGAAACAAGTATATTAATTAATTTATAAACATTACATGCCCCCCCAGCTATACCTTCATCATACAAAACCAGTGCAACAAAGTCCACTCTGTAGCTAACTATGAACACAGATTTTTGTCACTGTTTTCTGAAATTCGCTAAGGTCCCTAATTTCGGGAACCGACATATCCGATATAAGCTCTTTTATTGAA
TTCCACATGCTTAATAGAGGCTGTAATCTTTGTTCAACATAGAAGCCACTGGCATGAACGCTGTGTATTGAGAGTGCTACAAAGAGTTATAGGAAAAACATTTGTTTTGTTACAGGTATTGTTTTTCTTTATTATGGCTGCTCTGTAGCCACGACTGTTGTTTTATGTCGGTGGACTTTTGTATGCTATTTGTTTGGAGA
CGACGGGCCGCTGGACTTCTGTATGTTATTTGTTTTGGATACCTTGGGCCGCTGGACCTCGTATTCTGCCCACATCCAAAATCTAAATCACTGCAATTTTCAATGTATAAGATGCAAGCTATATGTAGAAGAGAAATATTCCATGGTATCTAACTTTTCAGGTTAGATGTTGCTACAGTTATTGATACCATTACATATGT
AAATTAATTAGGTGTTCCAAAAGAGAGCTACATGGCCTTTCTAGTTTTTATGAAAAATAACCGACAGTGCACTGGGCGGCATAAGTGCACTGGGCGGCATTAAGGCAAACCATTCGTTCAGATGAAATCACGGAGAGATTATATTTCTGGTGTGCTTAGTGAAAAGCAGATTCAGTATAGGTGTTTGATTGTGTAAAAGT
TGTCAAAATGAATAGGCATACGTGATCGAATCCTGAGCGTTTCTCACTTTCGCAATGTTTGGCCTTGATACAACGGGATCATTCGAGTGTGCAAAGCATAAGTACAAGTGAGCAGTTGAATTAGAGgtttgtcaaattttgtttttatttttttagtttacggcgatatcggtcggtagggttggggttgtacttgtgta
acatgaggttgaatctggtttatttttactcacagGTATATCTATGTCTCCAAGCACGACATATAAGGTTAGTCAAGGTTTGAACCAATGATGTTGCAAAGAGTGCTTAAATGGTGCATGTAATTGACAGTTGATGTACACCCCAGGGCATAGGCTGG