sp|F4J117|LSF1_ARATH ----> Phosphoglucan phosphatase LSF1, chloroplastic
Intron 1 GTTTGTATTT ... GATTTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 2.45 | 40.3 | 1 | 1 |
| A2 | 27.9 | 26 | 10 | 1 |
| A3 | 0 | 43.2 | 0 | 0 |
| A4 | 14.81 | 23.2 | 4 | 0 |
| A5 | 0 | 10.5 | 0 | 0 |
| A6 | 8.42 | 76.8 | 7 | 0 |
| A7 | 4.42 | 87.2 | 4 | 0 |
| A8 | 3.88 | 99.8 | 4 | 0 |
| A9 | 1 | 100 | 1 | 1 |
| A10 | 0 | 72 | 0 | 0 |
>TRINITY_DN121560_c1_g1_i5 from sample A2 / Example spliced isoformCATGGTATTATCTGCGAATATCCCGTTCTCGGGCACAAATTTACTGGTACTGTGTTCAAAATATCTAACGGAAGATTCTAAAATTGAAAGGATTATCAGTCCGGAACGTTCATCTTGGCCACGGCTTTCAGCAGAGCCAAGTAGCAATGAAAATAATGCGGGATACACAGAGATAAGCAGGGAGTTGCTATATATACATC
TAAAGCTGAAGCTCTTAATCTGCATTTCCTTGCTTCAGTAATAAATATATATTCCAATTGAACCATGACTGTTGGAGCAGTCCTCTCCCAGGGTCCTCTCGGCCATTTCACTCCTCCAGGGTATCAATATAATCAAGCTCTTGCAGTTTACGGGGTTGAGCGCCATGAGACCCACAAAAGGATATTGCTCTCTTGGCCAC
CTTCATGCTGCCTAAGTTCTAGGAGAAAGATAATAGCCAAATGGAACATAGACATGAGGAACTTCTTTCGTGGGAGGTTGGAGTATACTTCTTCTGCTCCAGCTTTCAGAAACAGTATTGGCAGAACTTCTTACCATGTAAACTCTCAGAGACAATCAGGGAAATTTCAGTTTTTCCTTTCCTCCGAGTCAGGCAATAGC
AACTGGTCAAAGCCAAGAAATTCAGTAAAAAATGGCTTTTCTTATATAAAATACAGGCAACACTCTGAAAATCCCGACACAAATGATCCCAGGATTAAGGCACGTGCAGACTTTGAACCTGACATTGGAGCAGATGCACCAGATTCGGTGAGCTCATTCAAAGTATTACCGGGGTCTATTACAGTGCAGCGGGCGATAGA
CAGAGGATCTTTATGGTTGAAGGAGTTTCCAAAGCGCTGGCTGATTGTACTGCTTTGTTTCTCTGCCTTTCTTCTTTGCAACATGGATCGTGTAAACATGAGTATTGCCATCCTTCCCATGTCTACAGAGTTTAATTGGAGCCCAGCAACAGTTGGATTAGTGCAGTCTTCATTTTTCTGGGGTTACCTGCTTACTCAGG
TTGCTGGAGGTATATGGGCAGATAAAGTTGGCGGGAAGCATGTATTGGGATTTGGAGTAGTTTGGTGGTCAATTGCCACTATTCTCACACCAATAGCTGCAAAAGTTGGATTGCCTTTCTTGCTTCTGGTTCGTGCATTTATGGGGGTTGGTGAGGGTGTTGCTATGCCTGCTATGAATAATATGCTCTCAAAGTGGATC
CCTCCAAAAGAAAGAAGCAGATCGTTGGCACTAGTGTATAGTGGGATGTACCTTGGTTCTGTAGCTGGGTTGGCCTTCTCTCCTTTGCTGATCCACAAGTTTAGTTGGCCCTCAGTGTTCTATTCTTTTGGTTCCCTTGGAGCCATATGGTTTGCCACCTGGCAACGGAATGCACAGAGTTCACCCCTTGAAGACCTAGA
AATTCGTCCAGAAGAGAAGGAGTTCATTCTAAGGAACAGTGAACTAAAAGAACCTGTTAAAACTATTCCATGGAAATTACTGCTGTCAAAGGCACCAGTTTGGGCACTGATAGTTTGCCACTTTTGTCATAACTGGGGGACATTCATTCTTCTCACATGGATGCCGACATACTACAATCAGGTCTTAAAATTTAACCTCA
CGGAATCTGGAATATTTTGTGTTTTACCTTGGCTTACTATGGCCTTGAGTGCTAATTTGGGAGGATGGATAGCTGACACTCTTGTGAGTAAGGGAGTATCAATCACAACAGTTCGCAAGGTTATGCAGTCAATTGGCTTTCTTGGACCAGCCTTTTTTTTAACACAACTGAGCCATGTCCGATCTCCAGCAATGGCAGTT
TTGTGCATGACATGCAGCCAAGGATGCGATGCTTTTTCTCAGTCTGGTCTTTATTCTAATCATCAGGATATTGGTCCACGCTATGCAGGTGTATTGCTTGGGCTGTCAAACACGGCAGGAGTACTAGCTGGCGTTTTTGGAACTGCAGTAACTGGTTACATTCTACAAAATGGTTCTTGGGATGACGTATTCAAGGTTGC
AGTTGGTCTCTATCTAGTTGGAACTGTAGTATGGAATCTATTTGCAACCGGGGAGCGAGTCTTTGATTAAATACTATTCCATAAAGTATTCTTGATCCTCCTTCATCAGTTAAGAAAGGTAATACGGCCAACATCAAAACAAGGTACAGAGAGTGAGGGGACCTCTGAGTCATAGTGACCTCTTTTGAGTATACCAAATA
GATCTGTCGAATAATTCTTATGTTGGAAATGCAATGGTGTCCATTAGTACTTAATAGAAGGAAAGAACAGTCAGAGACAATACTGCGAAAATTTATGATTATGCCAACTTTTTATTTTCCATCCGCAACGAGACAGGAGAAGTGCAAACACTACTAGAGTAACGGATGGGCCATCAGTACAGCATTGAACTGGTTTCCGT
AATCTTTCCAATTATGCATGAACAGTGAGTTCTGTGATAATGAATTCAATTTAGATCGCCATCTGAGTAGAGAGAAGTGTCAAGGTATATAATTATAGGGGTTTAATGATGATGGATCTTTATTGTACCGTTTGACTGGTTTTCCATATTTTTCCCAGTGCTTGTTTCTGTCCAAAGATATATTTAAGAAGGATGCATTA
AAAGTCCGAAAGGAAGTTCAATGGTCTAGATGATGCCCAAACAAAGATTATATCCAACACTTTTCACAAAGTAGCAGCAGGCTTAAATTTTATTATATTGAACGTGTGATTCCCTCCATTGCCATTTCATTGCAGATTCCAAACACAAAGGAGAAAATCATCAGGATATTGGTCCACGCTATGCAGGTGTATTGCTTGGG
CTGTCAAACACGGCAGGAGTACTAGCTGGCGTTTTTG
>TRINITY_DN121560_c1_g1_i8 from sample A2 / Example unspliced isoform:GATTTATACAGTATTTCTTAGCTTAATATCTTACTACTTTGCAGGGTGTATTGCTTGGGCTGTCAAACACGGCAGGAGTACTAGCTGGCGTTTTTGGAACTGCAGTAACTGGTTACATTCTACAAAATGgtttgtatttataagatgaaaaatcgtttctgtacagtttatgaggaagtaagaagttacccatcttttct
aatcaagatgtgatttatataaaaatatttcctgatgatgctctgttattagactttcaactggtcatgtaagtcagataagaagatttacaattttatttttctttctgattttacagGTTCTTGGGATGACGTATTCAA