NA ----> NA

Intron 1 GTGATGTTGT ... TTTTGTGTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	38.24	21	13	8.5
A2	30.3	23	10	1.5
A3	39.47	23	15	1
A4	47.37	10	9	3.5
A5	20	4	1	1
A6	20.69	46	12	6
A7	27.52	108	41	21
A8	28.48	113	45	11
A9	28.14	83	32.5	8
A10	30.17	121.5	52.5	37

>TRINITY_DN63094_c0_g1_i3 from sample A4 / Example spliced isoform

GTGGATTGATTCAATCAAGAGAGAAGAATTCTGTGGAAGAAGATACGAAGAGTTCCGTGGAAGGTAGAGAGGAGGAATGGCTAAGAGAGAAAACATAATCCGGCATGCTCTGGAAACGAATGAAGATCATCCTTCGGTGGCATATAAGGCTGGGACACAGCTCTGCACAGGAACCATCTCGGAAATGGACCAAATTCGTC
TATTCAACGACATGAATCCAACAACAGATTCATCAAAAGGGCAACAAAGTCATTCTCATTCTCCTGAAGAATCTGCCCATGAAGATAAGACTATTCCAGTTCACTTTCATCATCCAATTCCTCCCCAGCTCTACAGAGAAGAAAAGGATCCAGAGGTGATAAAGGGCATTGAACAAATTGGCGGCGGCCCTGGTGAAGCC
CGGGACATTGATGGGAAACCCATCGCACAAGAAGATGCAAGAGTGATTCAAAGGAAGGAAGCAGAATGCCTTTATCTGACGGGCAAAGGAAGTTTGGCAGCAAGAGCACAGTCTGCAGCAGCCGCTAACGTAAGGGAAGACAAAGTCGAGGAAAATGCCGGAGCTTGTGCAACTCTTCGCTGATGTATATTGTTCATGAT
TTTTGCTTTCTTGTAGTTACAGATAAAGCCTGTCCCGTTTTTGGAATTGTTGATCCGATTACACATGGACAGATTTTTTTCTTAACCTTACGACTGTATTGCAGCATCTTTTAAACAAGCGTGAATGTAAAAGAG

>TRINITY_DN63094_c0_g1_i2 from sample A4 / Example unspliced isoform:

GTGGATTGATTCAATCAAGAGAGAAGAATTCTGTGGAAGAAGATACGAAGAGTTCCGTGGAAGGTAGAGAGGAGGAATGGCTAAGAGAGAAAACATAATCCGGCATGCTCTGGAAACGAATGAAGATCATCCTTCGGTGGCATATAAGGCTGGGACACAGCTCTGCACAGGAACCATCTCGGAAATGGACCAAATTCGTC
TATTCAACGACATGAATCCAACAACAGATTCATCAAAAGGGCAACAAAGTCATTCTCATTCTCCTGAAGAATCTGCCCATGAAGATAAGACTATTCCAGTTCACTTTCATCATCCAATTCCTCCCCAGCTCTACAGgtgatgttgttaatgatcaataacattataaattttagactgattttgttatcgtccttatagt
tcaatcattcttcatttttgtgtagAGAAGAAAAGGATCCAGAGGTGATAAAGGGCATTGAACAAATTGGCGGCGGCCCTGGTGAAGCCCGGGACATTGATGGGAAACCCATCGCACAAGAAGATGCAAGAGTGATTCAAAGGAAGGAAGCAGAATGCCTTTATCTGACGGGCAAAGGAAGTTTGGCAGCAAGAGCACAG
TCTGCAGCAGCCGCTAACGTAAGGGAAGACAAAGTCGAGGAAAATGCCGGAGCTTGTGCAACTCTTCGCTGATGTATATTGTTCATGATTTTTGCTTTCTTGTAGTTACAGATAAAGCCTGTCCCGTTTTTGGAATTGTTGATCCGATTACACATGGACAGATTTTTTTCTTAACCTTACGACTGTATTGCAGCATCTTT
TAAACAAGCGTGAATGTAAAAGAG