sp|Q9ZST1|RR17_ORYSJ ----> Small ribosomal subunit protein uS17c
Intron 1 GTTTGATAAA ... GCATGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 42.38 | 19 | 11 | 17 |
| A2 | 30.91 | 8.2 | 2.8 | 4.6 |
| A3 | 36.86 | 19 | 9.6 | 12.6 |
| A4 | 36.23 | 16 | 7.6 | 10.6 |
| A5 | 40.45 | 6 | 3.6 | 4.6 |
| A6 | 35.54 | 286.4 | 126.4 | 189.8 |
| A7 | 35.91 | 199.8 | 105.6 | 118.6 |
| A8 | 37.06 | 232.2 | 116.6 | 157.2 |
| A9 | 35.99 | 197.6 | 97.6 | 125.4 |
| A10 | 36.31 | 136.8 | 67.8 | 88.6 |
>TRINITY_DN111011_c0_g1_i1 from sample A1 / Example spliced isoformTATAGAGGGAACATAAAGACATTGAAATTTGCCCCACGAGCTTCTATCTCTATCCCGACTTAATAAATCTGGGTTAAAATGGCAGACAACGAATTGGGCTTCTTAAGAAAAGGATGATGCCCTTAATGGTGTTTGGATAAGGATAATATAAGATGATGGTTTGCACTTCATAGCCTTTCATGTATTCTACCTGATCTATT
AGAAGTATAGATGGTCTCCTTGTGTTGAAATCCATGTCTGGGCTGAGTATGGCAATGGCCATGACGATGGGTTTAAGCTTGAAAGTGCCTGTTCCAACAACAAGCATAGGCACAGGACAATGCTCTTTTCTGAGAGGATCAACACACTTCTCCACCCCAAATTCCACCATTGCTAATATCGGTTCAACCAGTAATCCCTC
ACAACTAACGGTGAGGGCATTGAAGAATTTACAGGGGAAGGTGGTGTCTTCAACGAATGATAAAACTGTGAAAGTTGAGGTAGTAAGGCTAGCTATTCATCCCAAATACAAGAAGAGAGTAAGGAAGAGGAAGAAGTACCAGGCCCATGACCCAGACAACAAGTTCAAGGTGGGTGACCTTGTTGAATTAGAGAAATGCA
GACCCATAAGCAAGACGAAGACCTTTCTTGCGCTGCCTCTGCCTCCGCGTGCGAATGCCACTCCAAAGACCAAGTCACAAACAGAAGGGCTCTCCTGGCTCCTGGAATCTGCTGCAACTCTATCATGATATTCCAGGAATCTGTCAGATTGTGTCAGTCTGCTCGTGAGTTGCTGCAATGTGCTGAATGCTTTGTTGCTT
GCTGTGGTAATTGAAGTTTGTTTAAAATTGTCGAAACATTTGAGCATGATATTATGGCGTTTTGAAAAGCTTGGAAAGTTGGATTACTTCTGAACTTTGGGAAATTCAAAAAGTTTCAATCACCCCTTATTTTGCTTTTAAAGTTTAAATTTTCAGTGAAGTTACTTTTGCTTTGGTATTTTAAGTTCGATGATGATGTA
ATTTTTTAAAATTTTAAAATGCAAAGAAAATAAGTAATCTATCATCCA
>TRINITY_DN111011_c0_g1_i2 from sample A1 / Example unspliced isoform:TATAGAGGGAACATAAAGACATTGAAATTTGCCCCACGAGCTTCTATCTCTATCCCGACTTAATAAATCTGGGTTAAAATGGCAGACAACGAATTGGGCTTCTTAAGAAAAGGATGATGCCCTTAATGGTGTTTGGATAAGGATAATATAAGATGATGGTTTGCACTTCATAGCCTTTCATGTATTCTACCTGATCTATT
AGAAGTATAGATGGTCTCCTTGTGTTGAAATCCATGTCTGGGCTGAGTATGGCAATGGCCATGACGATGGGTTTAAGCTTGAAAGTGCCTGTTCCAACAACAAGCATAGGCACAGGACAATGCTCTTTTCTGAGAGGATCAACACACTTCTCCACCCCAAATTCCACCATTGCTAATATCGGTTCAACCAGTAATCCCTC
ACAACTAACGGTGAGGGCATTGAAGAATTTACAGGGGAAGGTGGTGTCTTCAACGAATGATAAAACTGTGAAAGTTGAGGTAGTAAGGCTAGCTATTCATCCCAAATACAAGAAGAGAGTAAGGAAGAGGAAGAAGTACCAGGCCCATGACCCAGACAACAAGTTCAAGGTGGGTGACCTTGTTGAATTAGAGAAATGCA
GACCCATAAGCAAGACGAAGACCTTTCTTGCGCTGCCTCTGCCTCCGCGTGCGAATGCCACTCCAAAGACCAAGTCACAAACAGAAGGGCTCTCCTGGCTCCTGGAATCTGCTGCAACTCTATCATGATATTCCAGgtttgataaatatgttgcatgtgcagGAATCTGTCAGATTGTGTCAGTCTGCTCGTGAGTTGCT
GCAATGTGCTGAATGCTTTGTTGCTTGCTGTGGTAATTGAAGTTTGTTTAAAATTGTCGAAACATTTGAGCATGATATTATGGCGTTTTGAAAAGCTTGGAAAGTTGGATTACTTCTGAACTTTGGGAAATTCAAAAAGTTTCAATCACCCCTTATTTTGCTTTTAAAGTTTAAATTTTCAGTGAAGTTACTTTTGCTTT
GGTATTTTAAGTTCGATGATGATGTAATTTTTTAAAATTTTAAAATGCAAAGAAAATAAGTAATCTATCATCCA