sp|Q2R1U4|CK5P1_ORYSJ ----> CDK5RAP1-like protein
Intron 1 GTGAAGAATA ... CTGATGAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.64 | 20 | 41 | 29 |
| A2 | 63.41 | 15 | 29 | 23 |
| A3 | 56.25 | 21 | 35 | 19 |
| A4 | 64.52 | 22 | 39 | 41 |
| A5 | 70.15 | 10 | 19 | 28 |
| A6 | 64.35 | 41 | 84 | 64 |
| A7 | 56.67 | 65 | 96 | 74 |
| A8 | 57.69 | 33 | 46 | 44 |
| A9 | 55 | 45 | 58 | 52 |
| A10 | 56.78 | 43 | 53 | 60 |
>TRINITY_DN44784_c0_g2_i1 from sample A7 / Example spliced isoformACTTGATTAACTTCCTCCTTTCTTTTCTACATAAACACCAATTATGCTTTCTCCTGTGCAAAGGATAAGAGAATGCAGTCATTTCTGGTGATATGGCTGCTCAAGCCTTTGTAGAACTCAAGAGCATGGCTGCCAGACCTCGAACAATTCCTCCTCTAAATTTCAATCTCCCAAAGATGCCTACAATTCAGCACTTCTAC
AGAACTCATCCAATTTTCATTAACAACGACCACAGACAGCAAAATTGGTGCAGGAATTCTACATTTGGTCAGAAGGCCCTAGCAATAACTACATATTCATCTACGATTAGCCATTGTGGGCGACTCACAGGCAATCCCAAGGGGCTATTCCTAAAGCATTTCTCAGACTTAGCGTTTCAGAAGAAGACGAGGACGACCAC
GGAGGGGGCTGATTTGCAGCATTTTATCAGGCGTGCTCAACCACAAGCTGCAACTCAACTTTCCTCTGATATCCAGTCTTCAGCTGCTGAAAATTCTCTAAAAGCACGGATTTACCATGAAACATATGGATGCCAAATGAATATCAATGACATGGAAGTTGTCCTGGCAGTCATGAAAAGTGCTGGATATACAGAAATGG
TAGATACACCAGAGAATGCTGAAATAATCTTCATCAACACATGTGCTATTCGAGAAAATGCTGAACAAAAGGTGTGGCAGAGGCTCAACTACTTCTGGTTTTTAAAAAGAGAGTGGAAAAGGAATGTTGAAAAGGGACGAGCAAAGTCAATTGTCCCTCCAAAAGTGGTTGTGCTGGGGTGCATGGCAGAGCGTTTGAAA
GAAAAAATAATTGAATCAGACAAGATGGTCGATGTAGTTTGTGGGCCTGATGCTTACAGGGACTTGCCTCGCTTGCTAGAAGCTGTTGATTATGGCCAAAAGGGAGTTAATACACTTCTGTCCCTTGAAGAAACATATGCTGATATCAGTCCAGTAAGAATTGCTAGAAATTCAGTTACAGCATTTGTCTCCATAATGCG
TGGCTGTAACAATATGTGCTCTTTCTGCATTGTACCTTTCACACGGGGGAGAGAGAGGTCACGCCCAGTAGAGTCCATTGTGAGAGAGGTGGGAGAGCTTTGGGAACAAGGTGTGAAAGAAGTGATGCTTCTTGGTCAGAATGTGAACAGTTATAATGATATCTCTATCCTTGATGGGAATGGTGCAGTTCCTGCAGGGA
ACAGTTGGGATTTTAGTCAAGGCTTTTCCAGCATATGCAAGATCGTTGGAACATCTGTAAAAGCATTCATTTACCAGCACAGAGTGGGAGTACAGCTGTTCTTGAAAGAATGCGGCGAGGTTACACACGAGAAGCTTATCTGGATCTTGTAGAAAGAATACGGAATATTATCCCTGGTGTTGGCTTAAGCAGTGACTTTA
TCTGTGGATTTTGTGGTGAAACAGAAGAGGACCATGCTGATACATTGAGCCTCATTAAGTCTGTAGGTTACGATATGGCTTACTTGTTTGCCTACAGCCTGCGGGAAAAAACACATGCTCATCGAAACTATGTAGATGATGTTCCAGATGATGTCAAGCAAAGAAGGCTGTCAGAGCTCATCAGTGCTTTCCGGGAATCA
ACAGGTCAGAGGTATGACTCGCAGGTGGGTACGACTCAACTTCTGCTTGTTGAAGGTCCCAATAAAAGAGCTCCAGAAAGTGAATTAATTGGAAAAAGTGACAGGGGACATAGGATTAGCTTTCGAAATGTGCCCCTAACCGATGTGACTATCTTGTCACCCCATAGAATGGAGATAGCTGGTCTTGGAGAGAGACCTGC
AGAGGATGCCCATGTTGCAAATGTTAATAAAAGGAACCCACGTATTGGTGATTATGTTGAAGTTCTTATTAGAAATTCAAGTCGAGCAACATTGTTTGGAGAGGCACTTGGTTTGACAAACTTAACCAGTTTCTATCAGAAGAGTAAAGAAATGGAGAAATTAGCAAAAATGAAACAAGTAATTTAGGCTTTCTTACATT
CATTAGAAAATGTTGTAATTGGCGTATTGAACTAAGCATGATGTATTATCTTATCAAAACTCACCATGCTGTATTCTTTTATTTTTATAACTTTGGAGTGGCCTGGGGTAAGGAATCTACATTTGTAAGTGGAATATACATATTCATCCAATGAGCAACATTTCCACTACGAGAATTCTCTTTGATGGTTGCCAACCATC
CAAAAGATCAGAATCCTACGGATTAATAGGTATCTGTAGGGAATATCTAGACAATGCCATAGATTTTTCTGTGTAAAATGAGATGACAAATTTAAGTTTTTAATTAACCCACATATACTCAACTAGGCGTACTTCCAGTTTTGACATAAAGAAGCAATTCACATTTGGCTGTACTTTCTGTTGAATACGGAAGACCGCCT
GAGAGTAGCTGTATGACCTTGTTCAATGTCGATTGATAGCTCTCAATGAGCTCTACACTGATATTTTACCAATTAATTTACAGAGTTTTCGCATGTCAACTTTCCATCGTATAACTAGC
>TRINITY_DN44784_c0_g2_i2 from sample A7 / Example unspliced isoform:ACTTGATTAACTTCCTCCTTTCTTTTCTACATAAACACCAATTATGCTTTCTCCTGTGCAAAGGATAAGAGAATGCAGTCATTTCTGGTGATATGGCTGCTCAAGCCTTTGTAGAACTCAAGAGCATGGCTGCCAGACCTCGAACAATTCCTCCTCTAAATTTCAATCTCCCAAAGATGCCTACAATTCAGCACTTCTAC
AGAACTCATCCAATTTTCATTAACAACGACCACAGACAGCAAAATTGGTGCAGGAATTCTACATTTGGTCAGAAGGCCCTAGCAATAACTACATATTCATCTACGATTAGCCATTGTGGGCGACTCACAGGCAATCCCAAGGGGCTATTCCTAAAGCATTTCTCAGACTTAGCGTTTCAGAAGAAGACGAGGACGACCAC
GGAGGGGGCTGATTTGCAGCATTTTATCAGGCGTGCTCAACCACAAGCTGCAACTCAACTTTCCTCTGATATCCAGTCTTCAGCTGCTGAAAATTCTCTAAAAGCACGGATTTACCATGAAACATATGGATGCCAAATGAATATCAATGACATGGAAGTTGTCCTGGCAGTCATGAAAAGTGCTGGATATACAGAAATGG
TAGATACACCAGAGAATGCTGAAATAATCTTCATCAACACATGTGCTATTCGAGAAAATGCTGAACAAAAGGTGTGGCAGAGGCTCAACTACTTCTGGTTTTTAAAAAGAGAGTGGAAAAGGAATGTTGAAAAGGGACGAGCAAAGTCAATTGTCCCTCCAAAAGTGGTTGTGCTGGGGTGCATGGCAGAGCGTTTGAAA
GAAAAAATAATTGAATCAGACAAGATGGTCGATGTAGTTTGTGGGCCTGATGCTTACAGGGACTTGCCTCGCTTGCTAGAAGCTGTTGATTATGGCCAAAAGGGAGTTAATACACTTCTGTCCCTTGAAGAAACATATGCTGATATCAGTCCAGTAAGAATTGCTAGAAATTCAGTTACAGCATTTGTCTCCATAATGCG
TGGCTGTAACAATATGTGCTCTTTCTGCATTGTACCTTTCACACGGGGGAGAGAGAGGTCACGCCCAGTAGAGTCCATTGTGAGAGAGGTGGGAGAGCTTTGGGAACAAGGTGTGAAAGAAGTGATGCTTCTTGGTCAGAATGTGAACAGTTATAATGATATCTCTATCCTTGATGGGAATGGTGCAGTTCCTGCAGGGA
ACAGTTGGGATTTTAGTCAAGGCTTTTCCAGCATATGCAAGgtgaagaatactggactgcgcttttccaatctattagatcgtctatctattgaatttcctgaaatgcggttcagattcacttctccccaccctaaggattttcctgatgacttgttgttcctgatgaaagATCGTTGGAACATCTGTAAAAGCATTCAT
TTACCAGCACAGAGTGGGAGTACAGCTGTTCTTGAAAGAATGCGGCGAGGTTACACACGAGAAGCTTATCTGGATCTTGTAGAAAGAATACGGAATATTATCCCTGGTGTTGGCTTAAGCAGTGACTTTATCTGTGGATTTTGTGGTGAAACAGAAGAGGACCATGCTGATACATTGAGCCTCATTAAGTCTGTAGGTTA
CGATATGGCTTACTTGTTTGCCTACAGCCTGCGGGAAAAAACACATGCTCATCGAAACTATGTAGATGATGTTCCAGATGATGTCAAGCAAAGAAGGCTGTCAGAGCTCATCAGTGCTTTCCGGGAATCAACAGGTCAGAGGTATGACTCGCAGGTGGGTACGACTCAACTTCTGCTTGTTGAAGGTCCCAATAAAAGAG
CTCCAGAAAGTGAATTAATTGGAAAAAGTGACAGGGGACATAGGATTAGCTTTCGAAATGTGCCCCTAACCGATGTGACTATCTTGTCACCCCATAGAATGGAGATAGCTGGTCTTGGAGAGAGACCTGCAGAGGATGCCCATGTTGCAAATGTTAATAAAAGGAACCCACGTATTGGTGATTATGTTGAAGTTCTTATT
AGAAATTCAAGTCGAGCAACATTGTTTGGAGAGGCACTTGGTTTGACAAACTTAACCAGTTTCTATCAGAAGAGTAAAGAAATGGAGAAATTAGCAAAAATGAAACAAGTAATTTAGGCTTTCTTACATTCATTAGAAAATGTTGTAATTGGCGTATTGAACTAAGCATGATGTATTATCTTATCAAAACTCACCATGCT
GTATTCTTTTATTTTTATAACTTTGGAGTGGCCTGGGGTAAGGAATCTACATTTGTAAGTGGAATATACATATTCATCCAATGAGCAACATTTCCACTACGAGAATTCTCTTTGATGGTTGCCAACCATCCAAAAGATCAGAATCCTACGGATTAATAGGTATCTGTAGGGAATATCTAGACAATGCCATAGATTTTTCT
GTGTAAAATGAGATGACAAATTTAAGTTTTTAATTAACCCACATATACTCAACTAGGCGTACTTCCAGTTTTGACATAAAGAAGCAATTCACATTTGGCTGTACTTTCTGTTGAATACGGAAGACCGCCTGAGAGTAGCTGTATGACCTTGTTCAATGTCGATTGATAGCTCTCAATGAGCTCTACACTGATATTTTACC
AATTAATTTACAGAGTTTTCGCATGTCAACTTTCCATCGTATAACTAGC