sp|Q9C8L2|FAP3_ARATH ----> Fatty-acid-binding protein 3, chloroplastic
Intron 1 GTAGCTGTTC ... TTCAATACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.64 | 6 | 15 | 6 |
| A2 | 33.33 | 13 | 8 | 5 |
| A3 | 33.33 | 12 | 8 | 4 |
| A4 | 29.03 | 11 | 7 | 2 |
| A5 | 50 | 5 | 7 | 3 |
| A6 | 43.24 | 21 | 21 | 11 |
| A7 | 48.84 | 11 | 16 | 5 |
| A8 | 58.73 | 13 | 21 | 16 |
| A9 | 40 | 6 | 2 | 6 |
| A10 | 41.18 | 15 | 7 | 14 |
>TRINITY_DN46417_c2_g1_i7 from sample A7 / Example spliced isoformCAAAATAACATATCTTATCAGTGGCGGAACGCTCATTTTCTTGCCAACCCCAGGATCAAAAACCTAACGAAATGGGTACCTTGACTTACTATCCAAACCAGAATACTAGCGATGCTGTCAAACAACTTTTACTGGAATCGAATTCCCTCGCTCCAAGGATGACTACATTCTCCTAGGCACAGCCGTTCGATGCATGCTAG
GACAGCTATCAATAATTACAGTTCTGTGCATGCTAGGACAGCTATCAACAATTACTGTTCCTTTTCTTCTTCTACAATACACTCGAGGTCTGCAATCAATAATACATATACACATTGTGTTGTTTTTTGTGTGTAAATTTGTAAAAGCACAAGCAGAGCATACGCCATTGGCATATACGTGGAAGATGGAAACAGCATAC
ATCAACGGATGCCAAAGGATGTCGTTTTCTTTGTTGGGCTGCCAAAACGGCGAGCCTTATGCACCCGGCGGACTTCTCCAGCTCCTCGAGAAGACCATCAGTAATTGTATCATGGCTGCCGCTCGTCTCAAAATCCTTGAGGTGGGCGATTGGCGCAGAAAAGGTTTATTCAATCATTCCTAATTAGTAGCTGCACTGGC
ACGCTCTCTCCTACTCGCTGTTCATTATTTCAATTGTTCACCTGCGGTTGTTTGGAGTTTTCTGATTAAAATGTATGATGTATTGATATCTGGATATGAAACAAACGGGTATTGAGCTTGCCCTGTACTATTTCTGCATTCAGACTATGGGTATGAGATTGTTTTTGCGTTTGCTTGTTGGCATAGGTTTTGATATTGTA
AGTCAATGTGAATATTAGAGGCCTAGGCTAAAGAATTCTGAAATTTGGGTTTTCTGATAAAAAAATTGGGTTGTCTGATAAAAGAATTGGGTTTTCTGATAAAAGAATTGGGTTTTCTGGTCAGTTTCTAGTGGTAGTTTAAATAGTAGAAACTAAAGAAGTTACATAGGTCAGATATTTAGAGGGCAGAAAAGGTGGGT
GTTTTTCTGTGTGGAGTATAAACTTGCCATACATCAATGCTGAGACAAAACAATATGTTGTATTTATGTACACACTTTGGTAAGAATATGTGCAAATTTCATACTAAGTTTCAG
>TRINITY_DN46417_c2_g1_i2 from sample A7 / Example unspliced isoform:CAAAATAACATATCTTATCAGTGGCGGAACGCTCATTTTCTTGCCAACCCCAGGATCAAAAACCTAACGAAATGGGTACCTTGACTTACTATCCAAACCAGAATACTAGCGATGCTGTCAAACAACTTTTACTGGAATCGAATTCCCTCGCTCCAAGGATGACTACATTCTCCTAGGCACAGCCGTTCGATGCATGCTAG
GACAGCTATCAATAATTACAGTTCTGTGCATGCTAGGACAGCTATCAACAATTACTGTTCCTTTTCTTCTTCTACAATACACTCGAGGTCTGCAATCAATAATACATATACACATTGTGTTGTTTTTTGTGTGTAAATTTGTAAAAGCACAAGCAGAGCATACGCCATTGGCATATACGTGGAAGATGGAAACAGCATAC
ATCAACGGATGCCAAAGgtagctgttctttgttatcagtcggtgcacatctctaacaagtccacatttccaccattatacatgtattgagaatgtatccccctccactgaaaatcgggacagagcttcaatctcctcttgggtgctgctactgcatttgcccaatagatgatatgtgttcgtctggcgttcacaattaca
tacatattaattgtttgaatcgaagtttctgtacaattctttgggcttcttgcactaggtaggtttcacagccctttggggtttgacagccattttcaatacagGATGTCGTTTTCTTTGTTGGGCTGCCAAAACGGCGAGCCTTATGCACCCGGCGGACTTCTCCAGCTCCTCGAGAAGACCATCAGTAATTGTATCAT
GGCTGCCGCTCGTCTCAAAATCCTTGAGGTGGGCGATTGGCGCAGAAAAGGTTTATTCAATCATTCCTAATTAGTAGCTGCACTGGCACGCTCTCTCCTACTCGCTGTTCATTATTTCAATTGTTCACCTGCGGTTGTTTGGAGTTTTCTGATTAAAATGTATGATGTATTGATATCTGGATATGAAACAAACGGGTATT
GAGCTTGCCCTGTACTATTTCTGCATTCAGACTATGGGTATGAGATTGTTTTTGCGTTTGCTTGTTGGCATAGGTTTTGATATTGTAAGTCAATGTGAATATTAGAGGCCTAGGCTAAAGAATTCTGAAATTTGGGTTTTCTGATAAAAAAATTGGGTTGTCTGATAAAAGAATTGGGTTTTCTGATAAAAGAATTGGGT
TTTCTGGTCAGTTTCTAGTGGTAGTTTAAATAGTAGAAACTAAAGAAGTTACATAGGTCAGATATTTAGAGGGCAGAAAAGGTGGGTGTTTTTCTGTGTGGAGTATAAACTTGCCATACATCAATGCTGAGACAAAACAATATGTTGTATTTATGTACACACTTTGGTAAGAATATGTGCAAATTTCATACTAAGTTTCA
G
Intron 2 GTAGGTCATT ... TGCTATTAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 31.58 | 13 | 6 | 6 |
| A2 | 45.24 | 23 | 19 | 3 |
| A3 | 50 | 14 | 14 | 7 |
| A4 | 37.14 | 22 | 13 | 1 |
| A5 | 33.33 | 8 | 4 | 6 |
| A6 | 50.65 | 38 | 39 | 0 |
| A7 | 61.84 | 29 | 47 | 0 |
| A8 | 51.56 | 31 | 33 | 0 |
| A9 | 50 | 45 | 45 | 0 |
| A10 | 49.18 | 31 | 30 | 1 |
>TRINITY_DN123099_c2_g4_i7 from sample A1 / Example spliced isoformTTGAATACCAAGAGTACGGTTTTTTCTCTTGCCGATTTTTTTAATTAATGGCATTTAAGGGTTTTTTTAACTCTCATTTCAAATATTTCCAATCCATTTATAAATATTGTAGGACACATTCAACCAACTAAACCGGAGAGTTGAATAATAAAAAACACAGCATACATCAATTAAATTATTTCCCACAAGTCTCTGCTGTG
TCCGCTCATCGCTGGTCTTTAAAAATCAAATCCAACGACAGGAAATTGGAGCAGGAATTCAACAATGGCAATGGCTAAGGGAGCCTTTCCCGCACTATCGATAGCCGCTGCCCTAATTTTTGCCGGGAAAACTACAAATTTCTCTTCCTCTGCCTCGGCGTGCGAATCTCTTCCTAACCAGAATACCAGCGATGCAGTGA
AAGAACCTTTTACTGGAATCGAATTCCCTCGCTCCAAGGATGACTACTTACTCCTAGGCACAGCCGTTCGATGCATGCTAGGACAGTGTAAATTTGCTAAAGCCAGGGCATACGCCGTTGGCCTGTACGTGGAAGATGGGAACAACGTACATCAATGGATGCCAAAGAATTCCAATGAGGAAGTGTTCAGTCGAGTGCTA
AGAGCACCTCTTGCTCGAAGACTTGTATTGGTAATGGATAAAGATGTAGCTGGGCATCACATTGCAAAGCTGGAAGGAGATTACATGTCCAAAGGAGCTTCCATTTCAAAGTAAAGCTAAAATAGGGAAAGCAATAGTGACGGGAGCTAAATTATCAGATAAGGGACAGCCTGCCCTAGCATTGAAATGATATATACATT
GGTCTTTGCTTATAAAATTAGTCTGTTTCTAATTGCATTAATCTTGATGGAAAACCTCAATGATAATGACAAGGCTTAATAGTTAATGTAGGTCCTATGGATGCTTTCTGAACTGATTCCCCTTTTTAGTGTTCTTCTCCTTCACTTCATTGCCTTACCTTTTAGTCTAGTTGATAATAGTGGTCATCTGCTTGGTCCAT
TTGGGCAGATGGTTTTTCTGCATGGCCTATGAAATTGGCATTGAATTACATTTTTTTTGAGAGCAATACTCTATTTTATTGAGTAAGCCTACTTTTTGAACGAAGAGAACAAAGCTTGGACCTAAGGATGGTGCTCTTATGGGGAGAACTCAACCCTTGATTTTGGCAAATGGTACAACCATGTGAGGATACTCTTTAGT
AGATTTCCTCTAGGGACTGCATTGAAAGTTTAAATTAAAGCATTTTTGGTTTCTCGTAGCTTTAAGGTCAAGTGTACTCTTTATCTGACCCGTGCCATTCTTCTGAGATCCTCAAGATGCTGTTATAGCTTTGAAATTTGTAACCCAGTACCTATAGAACATAGTTCAGCATGTCATTATATATTTACATTTCAAAATAA
TAATAAGGGAATTGTATCACTCAGATTATAGTTCCCACTAAAGGTGATCCTATTCAGGACGGTAGAGGAAGGGGCAATTAAATTGGTGACACCTCAAAGATCCCAATCACCACCAAAAGAGATGGTTGTCACACCGAAAGGGATTCTTGTCACTTTATGCTATTAGTAGCAAAGGGGGAGACCCTTGCTAGCCTAAGAAG
ACTAGCAGAAAGGCAAGA
>TRINITY_DN123099_c2_g4_i8 from sample A1 / Example unspliced isoform:TTGAATACCAAGAGTACGGTTTTTTCTCTTGCCGATTTTTTTAATTAATGGCATTTAAGGGTTTTTTTAACTCTCATTTCAAATATTTCCAATCCATTTATAAATATTGTAGGACACATTCAACCAACTAAACCGGAGAGTTGAATAATAAAAAACACAGCATACATCAATTAAATTATTTCCCACAAGTCTCTGCTGTG
TCCGCTCATCGCTGGTCTTTAAAAATCAAATCCAACGACAGGAAATTGGAGCAGGAATTCAACAATGGCAATGGCTAAGGGAGCCTTTCCCGCACTATCGATAGCCGCTGCCCTAATTTTTGCCGGGAAAACTACAAATTTCTCTTCCTCTGCCTCGGCGTGCGAATCTCTTCCTAACCAGAATACCAGCGATGCAGTGA
AAGAACCTTTTACTGGAATCGAATTCCCTCGCTCCAAGGATGACTACTTACTCCTAGGCACAGCCGTTCGATGCATGCTAGGACAGTGTAAATTTGCTAAAGCCAGGGCATACGCCGTTGGCCTGTACGTGGAAGATGGGAACAACGTACATCAATGGATGCCAAAGAATTCCAATGAGGAAGTGTTCAGTCGAGTGCTA
AGAGCACCTCTTGCTCGAAGACTTGTATTGGTAATGGATAAAGATGTAGCTGGGCATCACATTGCAAAGgtaggtcattgttttaatgattgtcagggctatcttaattatatttaacagtggcattaaccaagaccctttttaaaccttttggtatatgctattaagCTGGAAGGAGATTACATGTCCAAAGGAGCTTC
CATTTCAAAGTAAAGCTAAAATAGGGAAAGCAATAGTGACGGGAGCTAAATTATCAGATAAGGGACAGCCTGCCCTAGCATTGAAATGATATATACATTGGTCTTTGCTTATAAAATTAGTCTGTTTCTAATTGCATTAATCTTGATGGAAAACCTCAATGATAATGACAAGGCTTAATAGTTAATGTAGGTCCTATGGA
TGCTTTCTGAACTGATTCCCCTTTTTAGTGTTCTTCTCCTTCACTTCATTGCCTTACCTTTTAGTCTAGTTGATAATAGTGGTCATCTGCTTGGTCCATTTGGGCAGATGGTTTTTCTGCATGGCCTATGAAATTGGCATTGAATTACATTTTTTTTGAGAGCAATACTCTATTTTATTGAGTAAGCCTACTTTTTGAAC
GAAGAGAACAAAGCTTGGACCTAAGGATGGTGCTCTTATGGGGAGAACTCAACCCTTGATTTTGGCAAATGGTACAACCATGTGAGGATACTCTTTAGTAGATTTCCTCTAGGGACTGCATTGAAAGTTTAAATTAAAGCATTTTTGGTTTCTCGTAGCTTTAAGGTCAAGTGTACTCTTTATCTGACCCGTGCCATTCT
TCTGAGATCCTCAAGATGCTGTTATAGCTTTGAAATTTGTAACCCAGTACCTATAGAACATAGTTCAGCATGTCATTATATATTTACATTTCAAAATAATAATAAGGGAATTGTATCACTCAGATTATAGTTCCCACTAAAGGTGATCCTATTCAGGACGGTAGAGGAAGGGGCAATTAAATTGGTGACACCTCAAAGAT
CCCAATCACCACCAAAAGAGATGGTTGTCACACCGAAAGGGATTCTTGTCACTTTATGCTATTAGTAGCAAAGGGGGAGACCCTTGCTAGCCTAAGAAGACTAGCAGAAAGGCAAGA