NA ----> NA


Intron 1 GTGTGTCTGC ... TGCACGACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A161.545313
A265.525712
A369.2381422
A477.78268
A5507311
A663.22162233
A753.36526257
A858.16598282
A958.66374758
A1054.49384348



>TRINITY_DN49043_c2_g4_i17 from sample A7 / Example spliced isoform
TGTGTTTTTTTTTTTTTTTCGTTTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTTGGGTGGAAAGAAAAAAAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGTATGTATAGTTTTAATTTCTTGATATCACTGTCTTGTCTTTTATTTGTTGCATA
TATTATTGGTTGTATATATTATTGGGTTTTTTAATTATTTTATTTTTGTTTTTACTAATATTCTCTGTCTTGTGCAGGCAAAGTTATAAGAGCGTATGTGTGGAAGAATTTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGGCTATTCGACTGGACTAACCAACACTTTTGGTTGGATAATTTGGGCTG
GCTGGATACTTGCCTCAAAGCTTTAAGTCAGTGCATGAATCTATGGTTGGTGCAGGAATAAATCTTGGTAGTCCATATGAGTACAGGATTTTTGAACTAAGAGGAAAACATGTGATGTAAAGAAAGATGAAGAATATGCATTACTTGAAAAAGAAGATGAAGATTACTTAGTATAAGTTTATGAGAATGCAATCTTTTAT
CTTAGGGTGTAAATACTATCATTTTTTTTATGTAAATACTATCATTTTTTTTATGTAAATACTATCATTTTTTTTA


>TRINITY_DN49043_c2_g4_i5 from sample A7 / Example unspliced isoform:
TGTGTTTTTTTTTTTTTTTCGTTTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTTGGGTGGAAAGAAAAAAAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGTATGTATAGTTTTAATTTCTTGATATCACTGTCTTGTCTTTTATTTGTTGCATA
TATTATTGGTTGTATATATTATTGGGTTTTTTAATTATTTTATTTTTGTTTTTACTAATATTCTCTGTCTTGTGCAGGCAAAGTTATAAGAGCGTATGTGTGGAAGAATTTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGgtgtgtctgcaaacatggttatgccatagggaagttttcatttgtgtt
gaagttcatggcaaatgacaattagaaaagtgcatggcaaatgaagaacactcttaaaaagaggattgggtgcgtgcatgcctgggctgatcaagcaagccgaactactatgactaaacaaacaactgttacctgcacgacag
GCTATTCGACTGGACTAACCAACACTTTTGGTTGGATAATTTGGGCTGGCTGGATAC
TTGCCTCAAAGCTTTAAGTCAGTGCATGAATCTATGGTTGGTGCAGGAATAAATCTTGGTAGTCCATATGAGTACAGGATTTTTGAACTAAGAGGAAAACATGTGATGTAAAGAAAGATGAAGAATATGCATTACTTGAAAAAGAAGATGAAGATTACTTAGTATAAGTTTATGAGAATGCAATCTTTTATCTTAGGGTG
TAAATACTATCATTTTTTTTATGTAAATACTATCATTTTTTTTATGTAAATACTATCATTTTTTTTA




Intron 2 GTGAGTGTTA ... AATTTGACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A138.916.5912
A240.9913.5810
A356.329.5320
A431.8815410
A553.085.566
A613.484549
A78.79138.5619
A815.181992346
A915.4171.51114
A1010.52961111



>TRINITY_DN49043_c2_g4_i20 from sample A7 / Example spliced isoform
TGTGTTTTTTTTTTTTTTTCGTTTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTTGGGTGGAAAGAAAAAAAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGCAAAGTTATAAGAGCGTATATGTAGAAGAATTTCAAGATTGCAGGTGAATTTCA
GCTACTGCGGATTTTCAGGTTCCCTGAAATTTGGATTTTCAGTTTCCCTGAAATTTCAAGATTGCAGAAGAGTGCATGTATGACTGCTACTTATTCGACTGACTCTCAGAAAGAGGATTGGGTGCGTGCATGTATGTTGACTCTCAGAAAGAGGATTGGGTAGATGAGTAGAGGATTTTTAAACTAAGAGGAAGACATGT
GATGTAAAGGAAGATGAAGAATATGCTTTAACAAGAAGCATTACTTGGAAAAGAAGATCAAGATTACTTAGTATAAGTTTATCAGAATGCAATCTTATATTTTAAAATGTAAATTTTATTATTTTCATGCAACACTATAACTTATATATTAATAAAATTATTAATTTTTTTTAGAGGAAGGGCTTTGCCCTTTCTCAAAA
ATCTCAAGGGATGGCTATATGGCCAAAGCTATATGGCCAAAGCTATCTTTTGGGAGGTCTACTCTGAGTTTTTGGTTTTAGATGTTTAATTTTTATTCTGTTATTTCTATTATTGTTATTTGGTTATTTAATGTATGTTGTAATTTTTTTTGAATGCACCATTATGTTTATATAATTTATGGCCAAAGCTATATGGCCAA
AGCTATCTTTTGGGAGGTCTACTCTGAGTTTTTGGTTTTAGATGTTT


>TRINITY_DN49043_c2_g4_i9 from sample A7 / Example unspliced isoform:
ACTCTCAGAAAGAGGATTGGgtgagtgttatttttattctatcatatattattttcaaaaaatattagcttattaattaataatttttgtttaatttgacagGTAGATGAGTAGAGGATTTTTAAACTAAGAGGAAGACATGTGATGTAAAGGAAGATGAAGAATATGCTTTATCATATATTATTTTAAACAAATATTAA
TTTATTAATAAATTATTTTGTTCTATTAACTTATTAATAATTTTTGTTTTATTTGACAGGTAGATGAGTGGAGAATTTTTGAACTAAAGAGGAAGATTATGTGATGTAAAGGAAGATGGAGAATATGATTGAACAAAAAGCATTACCTGAATAAGTTTATCAGAATGCAATCTTATATTTTAAGGTGTAAATTTTATTAT
TTTCATGCAACACTATAACTTATATATTAATAAAATTATTAATTTTTTTTAGAGGAAGGGCTTTGCCCTTTCTCAAAAATCTCAAGGGATGGCTATATGGCCAAAGCTATATGGCCAAAGCTATCTTTTGGGAGGTCTACTCTGAGTTTTTGGTTTTAGATGTTTAATTTTTATTCTGTTATTTCTATTATTGTTATTTG
GTTATTTAATGTATGTTGTAATTTTTTTTGAATGCACCATTATGTTTATATAATTTATGGCCAAAGCTATATGGCCAAAGCTATCTTTTGGGAGGTCTACTCTGAGTTTTTGGTTTTAGATGTTT




Intron 3 GTTCCCTGAA ... GGATTTTCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A160.61132317
A266.6792115
A373.08144135
A457.14121913
A563.64243
A654.4446144
A762.0696171143
A851.65154192137
A950.62809668
A1052.97115150109



>TRINITY_DN49043_c2_g4_i13 from sample A7 / Example spliced isoform
TGTGTTTTTTTTTTTTTTTCGTTTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTTGGGTGGAAAGAAAAAAAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGCAAAGTTATAAGAGCGTATATGTAGAAGAATTTCAAGATTGCAGGTGAATTTCA
GCTACTGCGGATTTTCAGTTTCCCTGAAATTTCAAGATTGCAGGTAGATGAGTAGAGGATTTTTAAACTAAGAGGAAGACATGTGATGTAAAGGAAGATGAAGAATATGCTTGAACTAAAAGCATTACTTGAAAAAAAAAATGAAGATTAC


>TRINITY_DN49043_c2_g4_i14 from sample A7 / Example unspliced isoform:
TGTGTTTTTTTTTTTTTTTCGTTTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTTGGGTGGAAAGAAAAAAAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGCAAAGTTATAAGAGCGTATATGTAGAAGAATTTCAAGATTGCAGGTGAATTTCA
GCTACTGCGGATTTTCAGgttccctgaaatttggattttcagTTTCCCTGAAATTTCAAGATTGCAGATAGTTGAATAGAATATTTTATTTGTGTGACTGCATGGCAAATGAAGAAGAGTGCATGTATGACTGCTACTTATTCGACTGACTCTCAGAAAGAGGATTGGGTGCGTGCATGTATGTTGACTCTCAGAAAGAG
GATTGGGTAGATGAGTAGAGGATTTTTAAACTAAGAGGAAGACATGTGATGTAAAGGAAGATGAAGAATATGCTTTATCATATATTATTTTAAACAAATATTAATTTATTAATAAATTATTTTGTTCTATTAACTTATTAATAATTTTTGTTTTATTTGACAGGTAGATGAGTGGAGAATTTTTGAACTAAAGAGGAAGA
TTATGTGATGTAAAGGAAGATGGAGAATATGATTGAACAAAAAGCATTACCTGAATAAGTTTATCAGAATGCAATCTTATATTTTAAGGTGTAAATTTTATTATTTTCATGCAACACTATAACTTATATATTAATAAAATTATTAATTTTTTTTAGAGGAAGGGCTTTGCCCTTTCTCAAAAATCTCAAGGGATGGCTAT
ATGGCCAAAGCTATATGGCCAAAGCTATCTTTTGGGAGGTCTACTCTGAGTTTTTGGTTTTAGATGTTTAATTTTTATTCTGTTATTTCTATTATTGTTATTTGGTTATTTAATGTATGTTGTAATTTTTTTTGAATGCACCATTATGTTTATATAATTTATGGCCAAAGCTATATGGCCAAAGCTATCTTTTGGGAGGT
CTACTCTGAGTTTTTGGTTTTAGATGTTT




Intron 4 GTATGTATAG ... TCTTGTGCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A138.4619.416.97.3
A244.1228.723.321.7
A350.1434.636.233.2
A440.432518.115.4
A565.1711.22615.6
A635.1840.721.722.4
A722.382007837.4
A825.74219.189.762.2
A919.17157.939.136.1
A1011.01147.822.714.4



>TRINITY_DN111129_c0_g4_i1 from sample A5 / Example spliced isoform
GAAAGAGAGGCGCGGGGAGATTGTACAGGAGAGGAGCAGAGTGGGAGCTCGAACAGAGGAGGAACGGTGCTAGAAGTGGAGCGGGAGTTCGAACAGAGGAGGAGCCGTAGTTCGTACAAGAGAGGAGGAGGAGGAATGGAAGTCTTATTGTACGCCATTGTTTTACAATAAAGACGAGGAGCGGGAGTTCGTACACGAGA
GGAGCCGAGCAGCGGTATAGTGGAGGAGCAGAGCTGAACATAATATGGGATTATTTGAATTTGGGAGTCTTTTTTGAGTGTTTTTTTTTAATTCAGCATGGCCATGCTATGTGTTTTTTTTTTTTTCGTTTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTT
GGGTGGAAAGAAAAAGAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGCAAAGTTATAAGAGCGTATATGTGGAAGAATTTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGGTGTGTCTGCAAACATGGTTATGCCATAGGGAAGTTTTCATTTGTGTTGAAGTTCATGGCAAATGACAATTAG
AAAAGTGCATGGCAAATGAAGAACACTCTTAAAAAGAGGATTGGGTGCGTGCATGCCTGGGCTGATCAAGCAAGCCGAACTACTATGACTAAACAAACAACTGTTACCTGCACGACAGGCTATTCGACTGGACTAACCAACACTTTTGGTTGGATAATTTGGGCTGGCTGGATACTTGCCTCAAAG


>TRINITY_DN111129_c0_g4_i5 from sample A5 / Example unspliced isoform:
GAAAGAGAGGCGCGGGGAGATTGTACAGGAGAGGAGCAGAGTGGGAGCTCGAACAGAGGAGGAACGGTGCTAGAAGTGGAGCGGGAGTTCGAACAGAGGAGGAGCCGTAGTTCGTACAAGAGAGGAGGAGGAGGAATGGAAGTCTTATTGTACGCCATTGTTTTACAATAAAGACGAGGAGCGGGAGTTCGTACACGAGA
GGAGCCGAGCAGCGGTATAGTGGAGGAGCAGAGCTGAACATAATATGGGATTATTTGAATTTGGGAGTCTTTTTTGAGTGTTTTTTTTTAATTCAGCATGGCCATGCTATGTGTTTTTTTTTTTTTCGTTTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTT
GGGTGGAAAGAAAAAGAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATgtatgtatagttttaatttcttgatatcactgtcttgtcttttatttgttgcatatattattggttgtatatattattgggttttttaattattttatttttgtttttactaatattctctgtcttgtgcagGCAAAGTTATAAGAGC
GTATATGTGGAAGAATTTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGGTGTGTCTGCAAACATGGTTATGCCATAGGGAAGTTTTCATTTGTGTTGAAGTTCATGGCAAATGACAATTAGAAAAGTGCATGGCAAATGAAGAACACTCTTAAAAAGAGGATTGGGTGCGTGCATGCCTGGGCTGATCA
AGCAAGCCGAACTACTATGACTAAACAAACAACTGTTACCTGCACGACAGGCTATTCGACTGGACTAACCAACACTTTTGGTTGGATAATTTGGGCTGGCTGGATACTTGCCTCAAAG




Intron 5 GTGTGTCTGC ... ATTAGAAAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A145.4210.39.76.3
A254.46.311.34
A348.1814187
A454.956112.7
A547.476.384
A655.322230.323.7
A753.3178.7117.761
A852.6599.7136.378
A950.9968.38947.7
A1053.77567950.3



>TRINITY_DN43394_c1_g5_i2 from sample A6 / Example spliced isoform
TTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTTGGGTGGAAAGAAAAAAAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGCAAAGTTATAAGAGCGTATATGTGGAAGAATTTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGTG
CATG
GCAAATGAAGAAGACTCTTAAAAAGAGGATTGGGTGCGTGCATGCATGGGCTGATCAAGCAAGCCGAACTACTATGAACTACTATGACTAAACAAACAACTGTTACCTGCACGACAGGCTATTCGACTGGACTAACCAACACTTTTGGTTGGATAATTTGGGCTGGCTGGATACTTGCCTCAAAGCTTTAAGTCAG
TGCATG


>TRINITY_DN43394_c1_g5_i1 from sample A6 / Example unspliced isoform:
TTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTTGGGTGGAAAGAAAAAAAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGTATGTATAGTTTTAATTTCTTGATATCACTGTCTTGTCTTTTATTTGTTGCATATATTATTGGTTGTATATATTAT
TGGGTTTTTTAATTATTTTATTTTTGTTTTTACTCATATTTTCTGTCTTGTGCAGGCAAAGTTATAAGAGCGTATATGTGGAAGAATTTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGgtgtgtctgcaaacatggttatgtcatagggaagtttttatttgtgttgaattttatggcaaatgataat
tagaaaag
TGCATGGCAAATGAAGAAGACTCTTAAAAAGAGGATTGGGTGCGTGCATGCATGGGCTGATCAAGCAAGCCGAACTACTATGAACTACTATGACTAAACAAACAACTGTTACCTGCACGACAGGCTATTCGACTGGACTAACCAACACTTTTGGTTGGATAATTTGGGCTGGCTGGATACTTGCCTCAAAGC
TTTAAGTCAGTGCATG




Intron 6 GTATGTATAG ... TCTTGTGCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A138.1618.7176
A245.6629.32524
A350.75343733
A442.0923.71915
A568.689.72616
A637.81402127
A724.45203.38744.3
A828.062189673.7
A922.18158.74842.3
A1013.5147.32917



>TRINITY_DN111129_c0_g4_i1 from sample A5 / Example spliced isoform
GAAAGAGAGGCGCGGGGAGATTGTACAGGAGAGGAGCAGAGTGGGAGCTCGAACAGAGGAGGAACGGTGCTAGAAGTGGAGCGGGAGTTCGAACAGAGGAGGAGCCGTAGTTCGTACAAGAGAGGAGGAGGAGGAATGGAAGTCTTATTGTACGCCATTGTTTTACAATAAAGACGAGGAGCGGGAGTTCGTACACGAGA
GGAGCCGAGCAGCGGTATAGTGGAGGAGCAGAGCTGAACATAATATGGGATTATTTGAATTTGGGAGTCTTTTTTGAGTGTTTTTTTTTAATTCAGCATGGCCATGCTATGTGTTTTTTTTTTTTTCGTTTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTT
GGGTGGAAAGAAAAAGAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGCAAAGTTATAAGAGCGTATATGTGGAAGAATTTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGGTGTGTCTGCAAACATGGTTATGCCATAGGGAAGTTTTCATTTGTGTTGAAGTTCATGGCAAATGACAATTAG
AAAAGTGCATGGCAAATGAAGAACACTCTTAAAAAGAGGATTGGGTGCGTGCATGCCTGGGCTGATCAAGCAAGCCGAACTACTATGACTAAACAAACAACTGTTACCTGCACGACAGGCTATTCGACTGGACTAACCAACACTTTTGGTTGGATAATTTGGGCTGGCTGGATACTTGCCTCAAAG


>TRINITY_DN111129_c0_g4_i3 from sample A5 / Example unspliced isoform:
GAAAGAGAGGCGCGGGGAGATTGTACAGGAGAGGAGCAGAGTGGGAGCTCGAACAGAGGAGGAACGGTGCTAGAAGTGGAGCGGGAGTTCGAACAGAGGAGGAGCCGTAGTTCGTACAAGAGAGGAGGAGGAGGAATGGAAGTCTTATTGTACGCCATTGTTTTACAATAAAGACGAGGAGCGGGAGTTCGTACACGAGA
GGAGCCGAGCAGCGGTATAGTGGAGGAGCAGAGCTGAACATAATATGGGATTATTTGAATTTGGGAGTCTTTTTTGAGTGTTTTTTTTTAATTCAGCATGGCCATGCTATGTGTTTTTTTTTTTTTCGTTTCGTTTTTAAATTTTTAGTTTCTATTTTTATTATGTTTTGTTGGGTTTTGGGGTTTGGGTTTCGTTTGTT
GGGTGGAAAGAAAAAGAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATgtatgtatagttttaatttcttgatatcactgtcttgtcttttatttgttgcatatattattgggttttttaattattttatttttgtttttactaatattctctgtcttgtgcagGCAAAGTTATAAGAGCGTATATGTGGAAGAAT
TTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGGTGTGTCTGCAAACATGGTTATGCCATAGGGAAGTTTTCATTTGTGTTGAAGTTCATGGCAAATGACAATTAGAAAAGTGCATGGCAAATGAAGAACACTCTTAAAAAGAGGATTGGGTGCGTGCATGCCTGGGCTGATCAAGCAAGCCGAACTACT
ATGACTAAACAAACAACTGTTACCTGCACGACAGGCTATTCGACTGGACTAACCAACACTTTTGGTTGGATAATTTGGGCTGGCTGGATACTTGCCTCAAAG




Intron 7 GTATAGTGGA ... GGGTGGAAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A172.36175336
A265.81205027
A360.43377439
A464184123
A565.71123115
A670309743
A767.41146398206
A866.16178460236
A964.32119274155
A1069.83105325161



>TRINITY_DN122491_c2_g3_i1 from sample A2 / Example spliced isoform
GGCTAAGGAAAGAGAGGCGCGGGGAGATTGTACAGGAGAGGAGCAGAGTGGGAGCTCGAACAGAGGAGGAACGGTGCTAGAAGTGGGGCGGGAGTTCGAACAGAGGAGGAGCCGTAGTTCGTACAAGAGAGGAGGAGGAGGAATGGAAGTCTTATTGTACGGCATTGTTTTACAATAAAGAAGAGGAGCGGGAGTTCGTA
CACGAGAGGAGCCGAGCAGCGAAAAAGAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGCAAAGTTATAAGAGCGTATGTGTGGAAGAATTTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGGTGTGTCTGCAAACATGGTTATGCCATAGGGAAGTTTTCATTTGTGTTGAAGTTCATGGCAA
ATGACAATTAGAAAAGGTGAGTGTTATT


>TRINITY_DN122491_c2_g3_i5 from sample A2 / Example unspliced isoform:
GGCTAAGGAAAGAGAGGCGCGGGGAGATTGTACAGGAGAGGAGCAGAGTGGGAGCTCGAACAGAGGAGGAACGGTGCTAGAAGTGGGGCGGGAGTTCGAACAGAGGAGGAGCCGTAGTTCGTACAAGAGAGGAGGAGGAGGAATGGAAGTCTTATTGTACGGCATTGTTTTACAATAAAGAAGAGGAGCGGGAGTTCGTA
CACGAGAGGAGCCGAGCAGCGgtatagtggaggagcagagctgaacataatatgggattatttgaatttgggagtcttttttgagtgtttttttttaattcagcatggccatgctatgtgttttttttttttcgtttcgtttttaaatttttagtttctatttttattatgttttgttgggttttggggtttgggtttcg
tttgttgggtggaaag
AAAAAGAGCTACTACCGAAAACAACAGAGGAGAGCTTATAATGCAAAGTTATAAGAGCGTATGTGTGGAAGAATTTCAGCTACTGCGGAGTTTCAGTTACCCTGAAATTTTAAGATGGTGTGTCTGCAAACATGGTTATGCCATAGGGAAGTTTTCATTTGTGTTGAAGTTCATGGCAAATGAC
AATTAGAAAAGGTGAGTGTTATT