sp|A0A4D6Q4S0|MYB2_CROXC ----> Transcription factor MYB1
Intron 1 GTATGTGGGG ... ATTCGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 9.2 | 121 | 11 | 13 |
| A2 | 13.37 | 143 | 14 | 24.6 |
| A3 | 16.68 | 161 | 10.4 | 37.2 |
| A4 | 11.93 | 137 | 13.6 | 20 |
| A5 | 16.3 | 67 | 2.4 | 15 |
| A6 | 15.71 | 249 | 12.4 | 53 |
| A7 | 14.76 | 616 | 29.6 | 120.6 |
| A8 | 13.94 | 390 | 25.6 | 70.8 |
| A9 | 13.4 | 827.2 | 50.8 | 142.4 |
| A10 | 16.36 | 591 | 27.2 | 132.6 |
>TRINITY_DN101250_c1_g1_i1 from sample A4 / Example spliced isoformCGATAGTTGAGCGCCCTAGACGACTCCTTCGTTGTTGCCATTACTTCTATTTCTATGACATGGTAACAGTGGATCACTTTTTCCTTGACGAATAGTATCGTCGTCCACGGTATCTTACTATTGTGCCGTTGATTAATTAGCGTTACTTTCTTGTACCTAATCTCTGCATAATTGTTTTTTATTCCACTCTTGAGGGATCA
CAACCTTATACAGCATCTACTTTTAGCAAGGAGAATCTAATTGTTTCTATATATACTCAACGGTCCTGCCAAAGAGAAAAGACGATGCGAGTACCATGTGTGTCTCTTCCCAGCATTTGAATAATGGGTAGGTCTCCATGCTGCTCAAAAGAAGGGCTCAACCGCGGGACCTGGACTGCAAAGGAGGATATGATTCTGTC
CGAATACATTCGAATTCATGGTCATGGTCGATGGGCAAATCTACCCCCAAAAGCAGGTCTTAAACGCAGTGGAAAGAGTTGTAGATTACGCTGGTTGAACTATCTTCGTCCTGATATTAAACGCGGAAACATTTCGCCCGACGAGGAGGAGCTTATTATTCGGCTGCATCGCCTTCTTGGCAATCGGTGGTCGCTGATTG
CAGGTCGACTGCCTGAGCGAACAGACAATGAAATCAAGAACTACTGGAGCACTCATCTCAGCAAGAAGCTGTTGTTAATGAATCAATCTTCCACTACGCCAAATCTCAAGAAAAGGTCAAAATCTCCTTTTAACCTACAAAATCATTTGTTAATTACAACCCCCGTCAAGAAAACGACGGCCGTGGCTCAATATGACATG
ATAAGATCTAACAGCTTCAACGTATGCAGTACTCGTAATTCACACGAAGGATTTCAATCGTGTCATGTTAAAGAAATGAAGAATTCCTCCAAAGCGTTCTTCCGCGACCCACCAGCTGTGGTTGCAGATTCGATCACAAAGAATGATTCACAGCCCATTGCAAAAGAAACTAGAAACTCTACCTGTTCTATGTCGAGTTT
AGCAGATTGCGGGAGATCCCCAGATTCCGATTCTTGTGCAGGAGATGCAACTATTTTAGCCGAGAGTTTGCTCGAGTTGAGCGAGCTGTCGACTCCCGACTGTAATCTCCTCTCTTCTCCGTCCGAATTTTGCACAGATTTTGGACTAGAAGAATTCTATATGGAACCGGCTACACTGGCTGCAGACGCAATTGAGTTTG
AAGTCACGTGTTCCGATCAAACCAATATGCAAAGCGTTAACAGTTTTTCATTCGCCAGTTATCAGGAAAAGGAAGATTTCTACGGTAACACACAAGACCTAGATTGGATTTTTGAACTCGATTACACTCAGAAATGAGCTTACACACAGAAATAATCTGAGCTTCAACTTTAAAGACACTAGAAAAATGCTATAACAATC
ATGATCGATAGATATAATTCTCTCATAAAGAATAAATTCTTAGCTATGTTGGTTTGATGTGGATACAATGTAGATTTATGGATGGGAGATTTTAATATAAGCTCTGTTACCATCAAATTAGAAATTCAATTTCTATGAATGTGGC
>TRINITY_DN101250_c1_g1_i3 from sample A4 / Example unspliced isoform:CGATAGTTGAGCGCCCTAGACGACTCCTTCGTTGTTGCCATTACTTCTATTTCTATGACATGGTAACAGTGGATCACTTTTTCCTTGACGAATAGTATCGTCGTCCACGGTATCTTACTATTGTGCCGTTGATTAATTAGCGTTACTTTCTTGTACCTAATCTCTGCATAATTGTTTTTTATTCCACTCTTGAGGGATCA
CAACCTTATACAGCATCTACTTTTAGCAAGGAGAATCTAATTGTTTCTATATATACTCAACGGTCCTGCCAAAGAGAAAAGACGATGCGAGTACCATGTGTGTCTCTTCCCAGCATTTGAATAATGGGTAGGTCTCCATGCTGCTCAAAAGAAGGGCTCAACCGCGGGACCTGGACTGCAAAGGAGGATATGATTCTGTC
CGAATACATTCGAATTCATGGTCATGGTCGATGGGCAAATCTACCCCCAAAAGCAGGTGAATCTCTGTTTATCTCTGTTGATGCAGACGTAAATATGTATTTGGAGGCTAAATAAACGGATGGACTTTTTTGTTTTGTTTAGGTCTTAAACGCAGTGGAAAGAGTTGTAGATTACGCTGGTTGAACTATCTTCGTCCTGA
TATTAAACGCGGAAACATTTCGCCCGACGAGGAGGAGCTTATTATTCGGCTGCATCGCCTTCTTGGCAATCGgtatgtggggaatgactgaacattatttatttgtttatgcagcaaatttataaattgagtttcaatgtcgcggtgtctagaaattttgaattatttgcagagtgagtgtgacgtttaccattcgtgca
gGTGGTCGCTGATTGCAGGTCGA
Intron 2 GTGAATCTCT ... TTTTGTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.88 | 121 | 62 | 20 |
| A2 | 26.32 | 154 | 55 | 22 |
| A3 | 31.8 | 223 | 104 | 16 |
| A4 | 31.43 | 96 | 44 | 25 |
| A5 | 31.61 | 132 | 61 | 17 |
| A6 | 35.92 | 421 | 236 | 39 |
| A7 | 34.26 | 873 | 455 | 62 |
| A8 | 31.96 | 496 | 233 | 52 |
| A9 | 36.54 | 1337 | 770 | 92 |
| A10 | 33.91 | 1029 | 528 | 69 |
>TRINITY_DN101250_c1_g1_i1 from sample A4 / Example spliced isoformCGATAGTTGAGCGCCCTAGACGACTCCTTCGTTGTTGCCATTACTTCTATTTCTATGACATGGTAACAGTGGATCACTTTTTCCTTGACGAATAGTATCGTCGTCCACGGTATCTTACTATTGTGCCGTTGATTAATTAGCGTTACTTTCTTGTACCTAATCTCTGCATAATTGTTTTTTATTCCACTCTTGAGGGATCA
CAACCTTATACAGCATCTACTTTTAGCAAGGAGAATCTAATTGTTTCTATATATACTCAACGGTCCTGCCAAAGAGAAAAGACGATGCGAGTACCATGTGTGTCTCTTCCCAGCATTTGAATAATGGGTAGGTCTCCATGCTGCTCAAAAGAAGGGCTCAACCGCGGGACCTGGACTGCAAAGGAGGATATGATTCTGTC
CGAATACATTCGAATTCATGGTCATGGTCGATGGGCAAATCTACCCCCAAAAGCAGGTCTTAAACGCAGTGGAAAGAGTTGTAGATTACGCTGGTTGAACTATCTTCGTCCTGATATTAAACGCGGAAACATTTCGCCCGACGAGGAGGAGCTTATTATTCGGCTGCATCGCCTTCTTGGCAATCGGTGGTCGCTGATTG
CAGGTCGACTGCCTGAGCGAACAGACAATGAAATCAAGAACTACTGGAGCACTCATCTCAGCAAGAAGCTGTTGTTAATGAATCAATCTTCCACTACGCCAAATCTCAAGAAAAGGTCAAAATCTCCTTTTAACCTACAAAATCATTTGTTAATTACAACCCCCGTCAAGAAAACGACGGCCGTGGCTCAATATGACATG
ATAAGATCTAACAGCTTCAACGTATGCAGTACTCGTAATTCACACGAAGGATTTCAATCGTGTCATGTTAAAGAAATGAAGAATTCCTCCAAAGCGTTCTTCCGCGACCCACCAGCTGTGGTTGCAGATTCGATCACAAAGAATGATTCACAGCCCATTGCAAAAGAAACTAGAAACTCTACCTGTTCTATGTCGAGTTT
AGCAGATTGCGGGAGATCCCCAGATTCCGATTCTTGTGCAGGAGATGCAACTATTTTAGCCGAGAGTTTGCTCGAGTTGAGCGAGCTGTCGACTCCCGACTGTAATCTCCTCTCTTCTCCGTCCGAATTTTGCACAGATTTTGGACTAGAAGAATTCTATATGGAACCGGCTACACTGGCTGCAGACGCAATTGAGTTTG
AAGTCACGTGTTCCGATCAAACCAATATGCAAAGCGTTAACAGTTTTTCATTCGCCAGTTATCAGGAAAAGGAAGATTTCTACGGTAACACACAAGACCTAGATTGGATTTTTGAACTCGATTACACTCAGAAATGAGCTTACACACAGAAATAATCTGAGCTTCAACTTTAAAGACACTAGAAAAATGCTATAACAATC
ATGATCGATAGATATAATTCTCTCATAAAGAATAAATTCTTAGCTATGTTGGTTTGATGTGGATACAATGTAGATTTATGGATGGGAGATTTTAATATAAGCTCTGTTACCATCAAATTAGAAATTCAATTTCTATGAATGTGGC
>TRINITY_DN101250_c1_g1_i3 from sample A4 / Example unspliced isoform:CGATAGTTGAGCGCCCTAGACGACTCCTTCGTTGTTGCCATTACTTCTATTTCTATGACATGGTAACAGTGGATCACTTTTTCCTTGACGAATAGTATCGTCGTCCACGGTATCTTACTATTGTGCCGTTGATTAATTAGCGTTACTTTCTTGTACCTAATCTCTGCATAATTGTTTTTTATTCCACTCTTGAGGGATCA
CAACCTTATACAGCATCTACTTTTAGCAAGGAGAATCTAATTGTTTCTATATATACTCAACGGTCCTGCCAAAGAGAAAAGACGATGCGAGTACCATGTGTGTCTCTTCCCAGCATTTGAATAATGGGTAGGTCTCCATGCTGCTCAAAAGAAGGGCTCAACCGCGGGACCTGGACTGCAAAGGAGGATATGATTCTGTC
CGAATACATTCGAATTCATGGTCATGGTCGATGGGCAAATCTACCCCCAAAAGCAGgtgaatctctgtttatctctgttgatgcagacgtaaatatgtatttggaggctaaataaacggatggacttttttgttttgtttagGTCTTAAACGCAGTGGAAAGAGTTGTAGATTACGCTGGTTGAACTATCTTCGTCCTGA
TATTAAACGCGGAAACATTTCGCCCGACGAGGAGGAGCTTATTATTCGGCTGCATCGCCTTCTTGGCAATCGGTATGTGGGGAATGACTGAACATTATTTATTTGTTTATGCAGCAAATTTATAAATTGAGTTTCAATGTCGCGGTGTCTAGAAATTTTGAATTATTTGCAGAGTGAGTGTGACGTTTACCATTCGTGCA
GGTGGTCGCTGATTGCAGGTCGA
Intron 3 GTACAGTAGA ... TTTTCGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.64 | 2 | 3 | 4 |
| A2 | 60 | 4 | 5 | 7 |
| A3 | 52.94 | 4 | 5 | 4 |
| A4 | 66.67 | 2 | 4 | 4 |
| A5 | 76.47 | 2 | 7 | 6 |
| A6 | 55.75 | 25 | 30 | 33 |
| A7 | 70.18 | 34 | 71 | 89 |
| A8 | 62.59 | 55 | 85 | 99 |
| A9 | 59.2 | 61 | 77 | 100 |
| A10 | 60.95 | 33 | 50 | 53 |
>TRINITY_DN46223_c0_g3_i3 from sample A10 / Example spliced isoformGCGGGGGATTCAAAGATTTTCCTTATCAATTTTGAAAAATCTGCCGGAAGAAAATGATTGGACAAGTAGGGAAGGTTGGACTTGGAAATATCAGCCGTGAATCCCTTTTCGTCAAAGAAAGTTGCGGAACATATTGAAATACATTTCGAAAATTGGTTGTGAGTAGGAGAACTGAGAGTAATTCTATTTTGATGACCCTC
GGAAAAATCTGTTTTTCCAAGAGAATATTTAAATGGTCCAACGCATTAAGTAGAATATTACACCAATCACACGTTCTACAGATTTACCGCAGTAATATTTTTTAGCAGGGAGAATCTAATTGTTGTTTCTATATGTACTCAATGGCTCTTCGAAAGATAAGCGACGAGGCCGGTACTCTCTGTTCCAAGCAGAGGAGATC
ATCAGGTCTGGAATTAGTTTTTAGGGTTTACAGTAACAATTGTTTTTAGGGTTTACAGAAGAAGAATATCCAAGATGGGTAGATCTCCTTGCTGCTCAAAAGAAGGGCTCAACCGCGGGGTCTGGACCAAACAGGAGGATATGATTCTGTCTGAATATATTCGCATTCATGGCCATGGTGGATGGAGAAATCTCCCTGAA
AAAGCAGGGCTTAACCGGTGCGGAAAGAGTTGTAGATTACGCTGGACGCACTATCTTCGTCCCGATATTAAACGCGGAAACATTTCACCCGATGAGGAGGAACTCATTATTCGCATGCATCGACTTCTTGGCAATCGGTGGTCGCTGATAGCAGGACGACTGCCTGGGCGAACGGACAACGAAATCAAGAACTACTGGAA
CACTCATCTGAAAAAGAAGGAAGAAGGTCAGCAGTACAAGACGCACAATCTGAAGACAAGGCCAGAATCTCGTCCTCCTTTACAAAATGGTGCGTTCAAAACCACACCCGAGAAAATAACAATGGGGGTGAGACACTATCAAAAGGTAACACCGGACCGCTGCAGTAATATTGGTAGCTCAGATCAGGCCTTCAAATTGT
GTCAGATTCAAGAAACTACGAATTCTTCCAAGCCATGGTGCGACAAAGATTCAATCTCTGAAGATAATTCCGAGCGCATTGCCTTTCGTATGGAAGATGCTTATAATCTTCTTGGAGCAGAAGCGGACCTACAATCATTACATGATTTCGATCATTTTGCAGGAAATGCGGGTTTTGAATTACAAGATTTCTACAGCGCA
CCTGCTACAATGGACGCCGACGCCAAGATCAATGAGTTTGAACGTCAAAGCAAGACGCAGCAAGTTAATAATATAACACTGCCCGATGATCAACGATTCAAAGAATTCTACGATAGCTCAGAGCCCGTGGATTGGAATCAGGTACTGAATTATATATTGAACTGACATTTTCAGAAAGTGGTTTTCGTTCGTCAATATTA
CCATATTATTTTAATGAAATGAGCTTTGTAGGAGATTCCACATTAATCAAAATTGATTGAAATCATGACTATGAGTATGTAAACTCTTTGTTGAAAATATTTAGGAAATATAACAGTTATGTATGAATTAAGG
>TRINITY_DN46223_c0_g3_i6 from sample A10 / Example unspliced isoform:GCGGGGGATTCAAAGATTTTCCTTATCAATTTTGAAAAATCTGCCGGAAGAAAATGATTGGACAAGTAGGGAAGGTTGGACTTGGAAATATCAGCCGTGAATCCCTTTTCGTCAAAGAAAGTTGCGGAACATATTGAAATACATTTCGAAAATTGGTTGTGAGTAGGAGAACTGAGAGTAATTCTATTTTGATGACCCTC
GGAAAAATCTGTTTTTCCAAGAGAATATTTAAATGGTCCAACGCATTAAGTAGAATATTACACCAATCACACGTTCTACAGATTTACCGCAGTAATATTTTTTAGCAGGGAGAATCTAATTGTTGTTTCTATATGTACTCAATGGCTCTTCGAAAGATAAGCGACGAGGCCGGTACTCTCTGTTCCAAGCAGAGGAGATC
ATCAGGTCTGGAATTAGTTTTTAGGGTTTACAGTAACAATTGTTTTTAGGGTTTACAGAAGAAGAATATCCAAGATGGGTAGATCTCCTTGCTGCTCAAAAGAAGGGCTCAACCGCGGGGTCTGGACCAAACAGGAGGATATGATTCTGTCTGAATATATTCGCATTCATGGCCATGGTGGATGGAGAAATCTCCCTGAA
AAAGCAGGGCTTAACCGGTGCGGAAAGAGTTGTAGATTACGCTGGACGCACTATCTTCGTCCCGATATTAAACGCGGAAACATTTCACCCGATGAGGAGGAACTCATTATTCGCATGCATCGACTTCTTGGCAATCGGTGGTCGCTGATAGCAGGACGACTGCCTGGGCGAACGGACAACGAAATCAAGAACTACTGGAA
CACTCATCTGAAAAAGAAGGAAGAAGGTCAGCAGTACAAGACGCACAATCTGAAGACAAGGCCAGAATCTCGTCCTCCTTTACAAAATGGTGCGTTCAAAACCACACCCGAGAAAATAACAATGGGGGTGAGACACTATCAAAAGGTAACACCGGACCGCTGCAGTAATATTGGTAGCTCAGATCAGGCCTTCAAATTGT
GTCAGATTCAAGAAACTACGAATTCTTCCAAGCCATGGTGCGACAAAGATTCAATCTCTGAAGATAATTCCGAGCGCATTGCCTTTCGTATGGAAGATGCTTATAATCTTCTTGGAGCAGAAGCGGACCTACAATCATTACATGATTTCGATCATTTTGCAGGAAATGCGGgtacagtagacgagattttatttgatttg
gacaacctatcctctcccgaccataaacaatctgacttttcgacagGTTTTGAATTACAAGATTTCTACAGCGCACCTGCTACAATGGACGCCGACGCCAAGATCAATGAGTTTGAACGTCAAAGCAAGACGCAGCAAGTTAATAATATAACACTGCCCGATGATCAACGATTCAAAGAATTCTACGATAGCTCAGAGCC
CGTGGATTGGAATCAGGTACTGAATTATATATTGAACTGACATTTTCAGAAAGTGGTTTTCGTTCGTCAATATTACCATATTATTTTAATGAAATGAGCTTTGTAGGAGATTCCACATTAATCAAAATTGATTGAAATCATGACTATGAGTATGTAAACTCTTTGTTGAAAATATTTAGGAAATATAACAGTTATGTATG
AATTAAGG
Intron 4 GTCAAAATCT ... ACGTATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25.32 | 59 | 22 | 18 |
| A2 | 29.03 | 88 | 40 | 32 |
| A3 | 27.84 | 90.8 | 45 | 25 |
| A4 | 24.5 | 70.9 | 29 | 17 |
| A5 | 27.78 | 26 | 10 | 10 |
| A6 | 25.04 | 209.9 | 91.3 | 49 |
| A7 | 29.72 | 385.8 | 194.1 | 132 |
| A8 | 25.08 | 286.5 | 88.8 | 103 |
| A9 | 26.3 | 612.4 | 242 | 195 |
| A10 | 27.6 | 365 | 156.3 | 122 |
>TRINITY_DN101250_c1_g1_i2 from sample A4 / Example spliced isoformCGATAGTTGAGCGCCCTAGACGACTCCTTCGTTGTTGCCATTACTTCTATTTCTATGACATGGTAACAGTGGATCACTTTTTCCTTGACGAATAGTATCGTCGTCCACGGTATCTTACTATTGTGCCGTTGATTAATTAGCGTTACTTTCTTGTACCTAATCTCTGCATAATTGTTTTTTATTCCACTCTTGAGGGATCA
CAACCTTATACAGCATCTACTTTTAGCAAGGAGAATCTAATTGTTTCTATATATACTCAACGGTCCTGCCAAAGAGAAAAGACGATGCGAGTACCATGTGTGTCTCTTCCCAGCATTTGAATAATGGGTAGGTCTCCATGCTGCTCAAAAGAAGGGCTCAACCGCGGGACCTGGACTGCAAAGGAGGATATGATTCTGTC
CGAATACATTCGAATTCATGGTCATGGTCGATGGGCAAATCTACCCCCAAAAGCAGGTCTTAAACGCAGTGGAAAGAGTTGTAGATTACGCTGGTTGAACTATCTTCGTCCTGATATTAAACGCGGAAACATTTCGCCCGACGAGGAGGAGCTTATTATTCGGCTGCATCGCCTTCTTGGCAATCGGTGGTCGCTGATTG
CAGGTCGACTGCCTGAGCGAACAGACAATGAAATCAAGAACTACTGGAGCACTCATCTCAGCAAGAAGCTGTTGTTAATGAATCAATCTTCCACTACGCCAAATCTCAAGAAAAGTACTCGTAATTCACACGAAGGATTTCAATCGTGTCATGTTAAAGAAATGAAGAATTCCTCCAAAGCGTTCTTCCGCGACCCACCA
GCTGTGGTTGCAGATTCGATCACAAAGAATGATTCACAGCCCATTGCAAAAGAAACTAGAAACTCTACCTGTTCTATGTCGAGTTTAGCAGATTGCGGGAGATCCCCAGATTCCGATTCTTGTGCAGGAGATGCAACTATTTTAGCCGAGAGTTTGCTCGAGTTGAGCGAGCTGTCGACTCCCGACTGTAATCTCCTCTC
TTCTCCGTCCGAATTTTGCACAGATTTTGGACTAGAAGAATTCTATATGGAACCGGCTACACTGGCTGCAGACGCAATTGAGTTTGAAGTCACGTGTTCCGATCAAACCAATATGCAAAGCGTTAACAGTTTTTCATTCGCCAGTTATCAGGAAAAGGAAGATTTCTACGGTAACACACAAGACCTAGATTGGATTTTTG
AACTCGATTACACTCAGAAATGAGCTTACACACAGAAATAATCTGAGCTTCAACTTTAAAGACACTAGAAAAATGCTATAACAATCATGATCGATAGATATAATTCTCTCATAAAGAATAAATTCTTAGCTATGTTGGTTTGATGTGGATACAATGTAGATTTATGGATGGGAGATTTTAATATAAGCTCTGTTACCATC
AAATTAGAAATTCAATTTCTATGAATGTGGC
>TRINITY_DN101250_c1_g1_i1 from sample A4 / Example unspliced isoform:CGATAGTTGAGCGCCCTAGACGACTCCTTCGTTGTTGCCATTACTTCTATTTCTATGACATGGTAACAGTGGATCACTTTTTCCTTGACGAATAGTATCGTCGTCCACGGTATCTTACTATTGTGCCGTTGATTAATTAGCGTTACTTTCTTGTACCTAATCTCTGCATAATTGTTTTTTATTCCACTCTTGAGGGATCA
CAACCTTATACAGCATCTACTTTTAGCAAGGAGAATCTAATTGTTTCTATATATACTCAACGGTCCTGCCAAAGAGAAAAGACGATGCGAGTACCATGTGTGTCTCTTCCCAGCATTTGAATAATGGGTAGGTCTCCATGCTGCTCAAAAGAAGGGCTCAACCGCGGGACCTGGACTGCAAAGGAGGATATGATTCTGTC
CGAATACATTCGAATTCATGGTCATGGTCGATGGGCAAATCTACCCCCAAAAGCAGGTCTTAAACGCAGTGGAAAGAGTTGTAGATTACGCTGGTTGAACTATCTTCGTCCTGATATTAAACGCGGAAACATTTCGCCCGACGAGGAGGAGCTTATTATTCGGCTGCATCGCCTTCTTGGCAATCGGTGGTCGCTGATTG
CAGGTCGACTGCCTGAGCGAACAGACAATGAAATCAAGAACTACTGGAGCACTCATCTCAGCAAGAAGCTGTTGTTAATGAATCAATCTTCCACTACGCCAAATCTCAAGAAAAGgtcaaaatctccttttaacctacaaaatcatttgttaattacaacccccgtcaagaaaacgacggccgtggctcaatatgacatg
ataagatctaacagcttcaacgtatgcagTACTCGTAATTCACACGAAGGATTTCAATCGTGTCATGTTAAAGAAATGAAGAATTCCTCCAAAGCGTTCTTCCGCGACCCACCAGCTGTGGTTGCAGATTCGATCACAAAGAATGATTCACAGCCCATTGCAAAAGAAACTAGAAACTCTACCTGTTCTATGTCGAGTTT
AGCAGATTGCGGGAGATCCCCAGATTCCGATTCTTGTGCAGGAGATGCAACTATTTTAGCCGAGAGTTTGCTCGAGTTGAGCGAGCTGTCGACTCCCGACTGTAATCTCCTCTCTTCTCCGTCCGAATTTTGCACAGATTTTGGACTAGAAGAATTCTATATGGAACCGGCTACACTGGCTGCAGACGCAATTGAGTTTG
AAGTCACGTGTTCCGATCAAACCAATATGCAAAGCGTTAACAGTTTTTCATTCGCCAGTTATCAGGAAAAGGAAGATTTCTACGGTAACACACAAGACCTAGATTGGATTTTTGAACTCGATTACACTCAGAAATGAGCTTACACACAGAAATAATCTGAGCTTCAACTTTAAAGACACTAGAAAAATGCTATAACAATC
ATGATCGATAGATATAATTCTCTCATAAAGAATAAATTCTTAGCTATGTTGGTTTGATGTGGATACAATGTAGATTTATGGATGGGAGATTTTAATATAAGCTCTGTTACCATCAAATTAGAAATTCAATTTCTATGAATGTGGC
Intron 5 GTACAGTAGA ... GAATTACAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 52.94 | 4 | 3 | 6 |
| A2 | 60 | 4 | 5 | 7 |
| A3 | 44.83 | 8 | 5 | 8 |
| A4 | 57.14 | 3 | 4 | 4 |
| A5 | 76.47 | 2 | 7 | 6 |
| A6 | 49.32 | 37 | 30 | 42 |
| A7 | 68.38 | 37 | 71 | 89 |
| A8 | 61.13 | 62 | 85 | 110 |
| A9 | 57.77 | 72 | 77 | 120 |
| A10 | 57.36 | 42 | 50 | 63 |
>TRINITY_DN46223_c0_g3_i2 from sample A10 / Example spliced isoformGCGGGGGATTCAAAGATTTTCCTTATCAATTTTGAAAAATCTGCCGGAAGAAAATGATTGGACAAGTAGGGAAGGTTGGACTTGGAAATATCAGCCGTGAATCCCTTTTCGTCAAAGAAAGTTGCGGAACATATTGAAATACATTTCGAAAATTGGTTGTGAGTAGGAGAACTGAGAGTAATTCTATTTTGATGACCCTC
GGAAAAATCTGTTTTTCCAAGAGAATATTTAAATGGTCCAACGCATTAAGTAGAATATTACACCAATCACACGTTCTACAGATTTACCGCAGTAATATTTTTTAGCAGGGAGAATCTAATTGTTGTTTCTATATGTACTCAATGGCTCTTCGAAAGATAAGCGACGAGGCCGGTACTCTCTGTTCCAAGCAGAGGAGATC
ATCAGGTCTGGAATTAGTTTTTAGGGTTTACAGTAACAATTGTTTTTAGGGTTTACAGAAGAAGAATATCCAAGATGGGTAGATCTCCTTGCTGCTCAAAAGAAGGGCTCAACCGCGGGGTCTGGACCAAACAGGAGGATATGATTCTGTCTGAATATATTCGCATTCATGGCCATGGTGGATGGAGAAATCTCCCTGAA
AAAGCAGGGCTTAACCGGTGCGGAAAGAGTTGTAGATTACGCTGGACGCACTATCTTCGTCCCGATATTAAACGCGGAAACATTTCACCCGATGAGGAGGAACTCATTATTCGCATGCATCGACTTCTTGGCAATCGGTGGTCGCTGATAGCAGGACGACTGCCTGGGCGAACGGACAACGAAATCAAGAACTACTGGAA
CACTCATCTGAAAAAGAAGGAAGAAGGTCAGCAGTACAAGACGCACAATCTGAAGACAAGGCCAGAATCTCGTCCTCCTTTACAAAATGGTGCGTTCAAAACCACACCCGAGAAAATAACAATGGGGGTGAGACACTATCAAAAGGTAACACCGGACCGCTGCAGTAATATTGGTAGCTCAGATCAGGCCTTCAAATTGT
GTCAGATTCAAGAAACTACGAATTCTTCCAAGCCATGGTGCGACAAAGATTCAATCTCTGAAGATAATTCCGAGCGCATTGCCTTTCGTATGGAAGATGCTTATAATCTTCTTGGAGCAGAAGCGGACCTACAATCATTACATGATTTCGATCATTTTGCAGGAAATGCGGATTTCTACAGCGCACCTGCTACAATGGAC
GCCGACGCCAAGATCAATGAGTTTGAACGTCAAAGCAAGACGCAGCAAGTTAATAATATAACACTGCCCGATGATCAACGATTCAAAGAATTCTACGATAGCTCAGAGCCCGTGGATTGGAATCAGGTACTGAATTATATATTGAACTGACATTTTCAGAAAGTGGTTTTCGTTCGTCAATATTACCATATTATTTTAAT
GAAATGAGCTTTGTAGGAGATTCCACATTAATCAAAATTGATTGAAATCATGACTATGAGTATGTAAACTCTTTGTTGAAAATATTTAGGAAATATAACAGTTATGTATGAATTAAGG
>TRINITY_DN46223_c0_g3_i6 from sample A10 / Example unspliced isoform:GCGGGGGATTCAAAGATTTTCCTTATCAATTTTGAAAAATCTGCCGGAAGAAAATGATTGGACAAGTAGGGAAGGTTGGACTTGGAAATATCAGCCGTGAATCCCTTTTCGTCAAAGAAAGTTGCGGAACATATTGAAATACATTTCGAAAATTGGTTGTGAGTAGGAGAACTGAGAGTAATTCTATTTTGATGACCCTC
GGAAAAATCTGTTTTTCCAAGAGAATATTTAAATGGTCCAACGCATTAAGTAGAATATTACACCAATCACACGTTCTACAGATTTACCGCAGTAATATTTTTTAGCAGGGAGAATCTAATTGTTGTTTCTATATGTACTCAATGGCTCTTCGAAAGATAAGCGACGAGGCCGGTACTCTCTGTTCCAAGCAGAGGAGATC
ATCAGGTCTGGAATTAGTTTTTAGGGTTTACAGTAACAATTGTTTTTAGGGTTTACAGAAGAAGAATATCCAAGATGGGTAGATCTCCTTGCTGCTCAAAAGAAGGGCTCAACCGCGGGGTCTGGACCAAACAGGAGGATATGATTCTGTCTGAATATATTCGCATTCATGGCCATGGTGGATGGAGAAATCTCCCTGAA
AAAGCAGGGCTTAACCGGTGCGGAAAGAGTTGTAGATTACGCTGGACGCACTATCTTCGTCCCGATATTAAACGCGGAAACATTTCACCCGATGAGGAGGAACTCATTATTCGCATGCATCGACTTCTTGGCAATCGGTGGTCGCTGATAGCAGGACGACTGCCTGGGCGAACGGACAACGAAATCAAGAACTACTGGAA
CACTCATCTGAAAAAGAAGGAAGAAGGTCAGCAGTACAAGACGCACAATCTGAAGACAAGGCCAGAATCTCGTCCTCCTTTACAAAATGGTGCGTTCAAAACCACACCCGAGAAAATAACAATGGGGGTGAGACACTATCAAAAGGTAACACCGGACCGCTGCAGTAATATTGGTAGCTCAGATCAGGCCTTCAAATTGT
GTCAGATTCAAGAAACTACGAATTCTTCCAAGCCATGGTGCGACAAAGATTCAATCTCTGAAGATAATTCCGAGCGCATTGCCTTTCGTATGGAAGATGCTTATAATCTTCTTGGAGCAGAAGCGGACCTACAATCATTACATGATTTCGATCATTTTGCAGGAAATGCGGgtacagtagacgagattttatttgatttg
gacaacctatcctctcccgaccataaacaatctgacttttcgacaggttttgaattacaagATTTCTACAGCGCACCTGCTACAATGGACGCCGACGCCAAGATCAATGAGTTTGAACGTCAAAGCAAGACGCAGCAAGTTAATAATATAACACTGCCCGATGATCAACGATTCAAAGAATTCTACGATAGCTCAGAGCC
CGTGGATTGGAATCAGGTACTGAATTATATATTGAACTGACATTTTCAGAAAGTGGTTTTCGTTCGTCAATATTACCATATTATTTTAATGAAATGAGCTTTGTAGGAGATTCCACATTAATCAAAATTGATTGAAATCATGACTATGAGTATGTAAACTCTTTGTTGAAAATATTTAGGAAATATAACAGTTATGTATG
AATTAAGG