sp|Q9FYA6|BCAT5_ARATH ----> Branched-chain-amino-acid aminotransferase 5, chloroplastic

Intron 1 GTCCCGTGGG ... TAGATAGAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	72.6	10	34	19
A2	68	16	46	22
A3	63.49	23	53	27
A4	60	16	35	13
A5	68.75	5	15	7
A6	59.83	46	92	45
A7	65.34	61	148	82
A8	60.93	76	155	82
A9	70.94	60	183	110
A10	68.38	46	122	77

>TRINITY_DN124186_c2_g3_i13 from sample A1 / Example spliced isoform

GGCACAGCAGTGGTTGTTTCTCCCGTGGGAAGTATCACATATCTAGATAGAAGGGAAAATCTATTTCTACTCCCGCACTGCATGGAACCATACTTCCTGGAATTACAAGGAAAAGTATCATTGAGGTGGCTCGCAGTCGAGGTTATGAGGTCCATGAGCGCTTAGTATCTGTCGATGAGATGATGGATGCTGACGAGGTC
TTTTGCACAGGCACAGCAGTGGTTGTTTGTGTTGAAAGTACAACGTGGTGCTAAAGCAGAAGGCTTTTCTGATGTGCTATATCTTGATGCAATCAATAACAAGTATCTCGAGGAAGTCTCCTCGTGCAACATCTTTGTGGT

>TRINITY_DN124186_c2_g3_i15 from sample A1 / Example unspliced isoform:

GAGGAGTCAGTCCCTGACGATGACCACGTCCGGCCGAAACGATAAACCCTTGGTTCCGTAACGGGATTCTCCTATCCCCAACATCCTCACTCCCGACCGATTTCATTCCAGCGGGTCTTACTGTGCGTTGTTGGTACGTGGTTAGGCCGAGGGTTTTTCCTCATTCCAGTGAGAGTAGATTACCCTAGCGCCACATTAAC
CACGAGTTTCCAGAGCTTCGGCGGGTCGGGCAATGGAGAGCATAACTATTCGCTTACAGTCGTCTTCTCTTGGTAGCGTAGGTGTTCATAGGTCTTCTTGTTATGCGGTGGGAAAAGGGATTTTTTCAGGCACTCCATGGAGCCGACAAGTGCAGCAGCCTTTGAGGTCTAAGTTTGAGAGGGCCAATCTTAGGGCCCAA
ATACTCGAGTATGGAAGGAAATATTGCATAATTTTTGGAGCATTGCCTACACAAGCAGAAGTAGTCACCAGCGCTTTTGAGGAAGTTGATGAGCTAGATAACATTGATTGGGATAACCTAGGGTTTGGATTTCTAAAAACTGATTATATGTACCTCATGAAATGTGGCGAAGATGGAGTGTTTTCTAAAGGAGACCTTTG
CCCTTTTGGAAATATTGAACTAAGCCCGTCAGCTGGTGTCTTGAATTATGGACAGGGTTTATTTGAAGGCTTGAAAGCATATAGGAGAGCTGATGGGCAAATTGTGCTCTTTCGTCCAGAAGAGAATGCCTTGCGGCTGACAAAGGGTGCAGAACGCATGTGTATGCCAGCCCCATCAGTAGAACACTTTGTGGAGGCTG
TAAAACAAACAGTCTCGGCCAACAAACGCTGGATACCGCCCTTTGGCAAAGGCTCTCTTTATATCCGTCCACTACTTCTTGGTACTGGAGCTGTTTTAGGACTTGCTCCAGCTCCAGAGGTTACTTTTCTTATATTTGTTTCCCCTGTTGGAAACTACTTCAAGGAAGGGTTGGCACCAATTCAATTACAGGTTGCAACA
AAATACCATCGTGCTTCTCCAGGTGGAACTGGAAATGTCAAAACCATAGGCAATTATGCACCGGTGTTGAAAGTACAACGTGGTGCTAAAGCAGAAGGCTTTTCTGATGTGCTATATCTTGATGCAATCAATAACAAGTATCTCGAGGAAGTCTCCTCGTGCAACATCTTTGTGGTGAAGGGAAAATCTATTTCTACTCC
CGCACTGCATGGAACCATACTTCCTGGAATTACAAGGAAAAGTATCATTGAGGTGGCTCGCAGTCGAGGTTATGAGGTCCATGAGCGCTTAGTATCTGTCGATGAGATGATGGATGCTGACGAGGTCTTTTGCACAGGCACAGCAGTGGTTGTTTgtcccgtgggaagtatcacatatctagatagaagGTGTTGAAAGT
ACAACGTGGTGCTAAAGCAGAAGGCTTTTCTGATGTGCTATATCTTGATGCAATCAATAACAAGTATCTCGAGGAAGTCTCCTCGTGCAACATCTTTGTGGT