sp|Q5SN75|P2C08_ORYSJ ----> Probable protein phosphatase 2C 8
Intron 1 GTTTGAACTA ... TCTCTTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40.48 | 25 | 17 | 10.4 |
| A2 | 31.03 | 20 | 9 | 5.4 |
| A3 | 47.22 | 19 | 17 | 3.8 |
| A4 | 48.65 | 19 | 18 | 4.6 |
| A5 | 44 | 14 | 11 | 3.8 |
| A6 | 26.92 | 19 | 7 | 1.1 |
| A7 | 35 | 13 | 7 | 0.6 |
| A8 | 28.57 | 5 | 2 | 1.1 |
| A9 | 25 | 6 | 2 | 0.6 |
| A10 | 25 | 15 | 5 | 1.7 |
>TRINITY_DN114064_c0_g1_i3 from sample A1 / Example spliced isoformGAAAGATTGTGCGAGGGTTTCTGCGTTCATTTTTTCTCTCTTTTCCCGTTATATTCAATCTTCTCGTAATTTCAGAACAATTCTAACATCATCAATTATTTCTCCAAGATCTTTGCAGAGACCGATCTATTCTCCCTCGGGAATTTTTTTTGGCTTAAAACGCGAGATTTTTCATCTTTTACTTTCTCAATTATTTTTTC
CGCTGCAAGTTTTTATTTGGGGGAGATCATGATTGTCCTGTTGAGCGAATGCGCAGAAGAGCAGGAGATGATCTGGAAAAAAATACCAGTCCAATCTGCGAAAATTTGCAGTGGTTGTTTTTATCCGTGGAGCCCGTGATTCGAACCGCTGACGAATGTGCGCCTTAAGAATGAGGGACATGTCTCTGGACGAAATTTGT
GGCTCGAACAGACTTTCATTTTAGGGGTTTCTTTCCAATTTTGTTCATTTTCAGGTTTTTAAGTGGAGAGTTTCCGGAAAATTGAACCGGAAAAAAATTGTTCTGGAGCGCAGTTTCGAACCCGCGACCTTCTTGGAGACGAATTAGTTCTAACCAGAACTTTTATTCTTACAAGCGTGCTTCTGTGAAATATACGGGAT
TTTCTCTGCAAAAATTTAATCCCGCGGCATCAGAAATCACGTAGAGTTACCAGGTCTTTGAACGCAGAATTTGGAGAAGCAAGGCCGTTTCAATTTCTCGGCTGTGTGCTTTGGATGAGAATGGAAACAGTGATACCCACGCCCGATGCCTGCATGAACCCTTGCAGTTTGCTGGAAGAGACTCCGGCCATGGCCGCAAG
GCGACGCCGGACGGAAATCCGGCGCCTGAAATTGCTGTCCAATAGCGGTAATTTTTCCGATATGGTCAAAAAGCGCACTCGTACACGTAACGATCGGGTTTGCAGTAGTTGTTTCGGGAGGGAGGTGACTTCTTTGGCGGAGGAGGATGCTGAAAATTCATTGGCAATGGAAATTGAAATGCAGTCGCAGACTCTGTATC
CTGCCAGAAGGCTGGTGAGGTCAGTGTCGACACCTATCGGTTGGAATAGTGGGCTACTTTGCACCTGCCGCGTGGAGAAATTTTGGACGAGTGAGGCCTATGACAAACAAAACAGCATTATTAGTACCCTTGGCAATGAGAAAAACAAATATAACAGTAGCAGCAGCAATAATAATAATAACTCTAATAAGGATAGTACC
AGTAATGTCGCAGCGGATGCAGAGCCTGTGGATCAAGCTTCAACTCAAAAAGAGGCAACTACTGATAATAAGCCTCAACGAGAGAAACCATCTTCAGAAAATGACAATAATAACAATAGCAAGGCCCCCCCTACACCTCCTCCTCTTCCCGCTGCTGCAAGTAGATGTAACATTCCTGTTCCTGCTACACAGGGATCTAA
ACAGCATACTAGTGAGCAGGGTATTTCGTCAAACAGGCCGTTGAAGGGCATAGGCAGGGCTAACAGTGAAAGCATCAGTTTGCTGTTGAAGGATCCATGTCCCCCGCACAGTACGATGTCTGTAATTGGCAGAAGACGTGAAATGGAAGATGCTGTTTCGTCCGTGCCCTCCTTCTTTTCTCTTCCCAAAGCTAGTTCTC
TTGCACTTCTAGATGGGTGCTCTGGATTCGGACCGCCACCGTTGTCTACTGATCTCCACTTCTTTGCTGTCTACGATGGCCATGGTGGTTCTCAGGCCTCAATATTCTGCAAGGACCGTTTCCATGAGGCTCTTGCTGAGGAGTTGAGAAATTCCTCTCCATTTTGCAGAGACTTAAACGATTGGAGTAAAGTGATGTCT
ACTTGCTTCACGAAAATAGATATGGCAGTGGGAGGGATGTGTCCAAATGGAAGCTGTGATAGTGGGGATTCACAAAAGACTAGTGATTGTTGCCAAGATCCAGTTGCACCAGAGAACGTGGGTTCAACAGCTGTGGTAGCCATTGTGAGCCCATCTCAACTTGTTATTGCAAACTGTGGAGATTCCAGAGCAGTCTTATC
AAGGGGAGGCAAAGCTATTCCCCTTTCTAGCGACCATAAGGTATGAGGGAAATTAAGGATTTTTGAACCATCTATTATCTGTAAGGCTTTTCCAGAGCCTAGATCCAATTCTGTAATCCGTGTTTGATGCAGATGCATGATGATTAGCTTTTCATTTGACATTGAGTTAGTTTTTCATTTTTTTTCAGGTAACTAGTAGG
CGATTACTTTAATTGGTCCATGTTTTAAGTCCTGATACCAAAGATTGAC
>TRINITY_DN114064_c0_g1_i7 from sample A1 / Example unspliced isoform:GAAAGATTGTGCGAGGGTTTCTGCGTTCATTTTTTCTCTCTTTTCCCGTTATATTCAATCTTCTCGTAATTTCAGAACAATTCTAACATCATCAATTATTTCTCCAAGATCTTTGCAGAGACCGATCTATTCTCCCTCGGGAATTTTTTTTGGCTTAAAACGCGAGATTTTTCATCTTTTACTTTCTCAATTATTTTTTC
CGCTGCAAGTTTTTATTTGGGGGAGATCATGATTGTCCTGTTGAGCGAATGCGCAGAAGAGCAGGAGATGATCTGGAAAAAAATACCAGTCCAATCTGCGAAAATTTGCAGTGGTTGTTTTTATCCGTGGAGCCCGTGATTCGAACCGCTGACGAATGTGCGCCTTAAGAATGAGGGACATGTCTCTGGACGAAATTTGT
GGCTCGAACAGACTTTCATTTTAGGGGTTTCTTTCCAATTTTGTTCATTTTCAGGTTTTTAAGTGGAGAGTTTCCGGAAAATTGAACCGGAAAAAAATTGTTCTGGAGCGCAGTTTCGAACCCGCGACCTTCTTGGAGACGAATTAGTTCTAACCAGAACTTTTATTCTTACAAGCGTGCTTCTGTGAAATATACGGGAT
TTTCTCTGCAAAAATTTAATCCCGCGGCATCAGAAATCACGTAGAGTTACCAGgtttgaactaggaacaactgccgcatctgtcttttttttgctttcctggaaactcaaattattttgtgccgggcgatactttttacaccgctttgtgaatttatgaaaagaaacagtttttaattttcataaaagccaccccttcat
ctcgaaacacggtagataaataaacactttacattctttctgcaaattttgaggatcatagtcactggatatttatttgcgatctatctcttttagGTCTTTGAACGCAGAATTTGGAGAAGCAAGGCCGTTTCAATTTCTCGGCTGTGTGCTTTGGATGAGAATGGAAACAGTGATACCCACGCCCGATGCCTGCATGA
ACCCTTGCAGTTTGCTGGAAGAGACTCCGGCCATGGCCGCAAGGCGACGCCGGACGGAAATCCGGCGCCTGAAATTGCTGTCCAATAGCGGTAATTTTTCCGATATGGTCAAAAAGCGCACTCGTACACGTAACGATCGGGTTTGCAGTAGTTGTTTCGGGAGGGAGGTGACTTCTTTGGCGGAGGAGGATGCTGAAAAT
TCATTGGCAATGGAAATTGAAATGCAGTCGCAGACTCTGTATCCTGCCAGAAGGCTGGTGAGGTCAGTGTCGACACCTATCGGTTGGAATAGTGGGCTACTTTGCACCTGCCGCGTGGAGAAATTTTGGACGAGTGAGGCCTATGACAAACAAAACAGCATTATTAGTACCCTTGGCAATGAGAAAAACAAATATAACAG
TAGCAGCAGCAATAATAATAATAACTCTAATAAGGATAGTACCAGTAATGTCGCAGCGGATGCAGAGCCTGTGGATCAAGCTTCAACTCAAAAAGAGGCAACTACTGATAATAAGCCTCAACGAGAGAAACCATCTTCAGAAAATGACAATAATAACAATAGCAAGGCCCCCCCTACACCTCCTCCTCTTCCCGCTGCTG
CAAGTAGATGTAACATTCCTGTTCCTGCTACACAGGGATCTAAACAGCATACTAGTGAGCAGGGTATTTCGTCAAACAGGCCGTTGAAGGGCATAGGCAGGGCTAACAGTGAAAGCATCAGTTTGCTGTTGAAGGATCCATGTCCCCCGCACAGTACGATGTCTGTAATTGGCAGAAGACGTGAAATGGAAGATGCTGTT
TCGTCCGTGCCCTCCTTCTTTTCTCTTCCCAAAGCTAGTTCTCTTGCACTTCTAGATGGGTGCTCTGGATTCGGACCGCCACCGTTGTCTACTGATCTCCACTTCTTTGCTGTCTACGATGGCCATGGTGGTTCTCAGGCCTCAATATTCTGCAAGGACCGTTTCCATGAGGCTCTTGCTGAGGAGTTGAGAAATTCCTC
TCCATTTTGCAGAGACTTAAACGATTGGAGTAAAGTGATGTCTACTTGCTTCACGAAAATAGATATGGCAGTGGGAGGGATGTGTCCAAATGGAAGCTGTGATAGTGGGGATTCACAAAAGACTAGTGATTGTTGCCAAGATCCAGTTGCACCAGAGAACGTGGGTTCAACAGCTGTGGTAGCCATTGTGAGCCCATCTC
AACTTGTTATTGCAAACTGTGGAGATTCCAGAGCAGTCTTATCAAGGGGAGGCAAAGCTATTCCCCTTTCTAGCGACCATAAGCCTGAACGAGAGGACGAGTTGAGCCGCATTGAAGCTGCTGGTGGACGCGTTATTTTTTGGAATGGATATCGTGTTGGAGGCTTTCTTGCTATGTCAAGAGCCATAGGTGACCGCTTC
TTGAAACGGTATGTGATTTCCGAACCAGAAGTAACATGTACAGAGCGTACACATGAAGATGAATGTCTGATTTTAGCCAGTGATGGCCTATGGGATGTTTTGTCAAATGATCTTGTCTGTGAAGTTGCTCGAAAATGTCTGGCTGGTTATCGACCTCATCGTTCAAAGGGTATTACTGAAGACACTCCTGTTGGCGCAGC
AGCTGCTCTCCTTACAAAATTAGCCTTGGGAAAGGGAAGTGGAGATAATATTAGTGTAGTTGTAATCGATCTCAAAGAAAGAAGAACTAGAAACAGATAATGATTACTCTGCTTTATATACATATATCTATATATATAGATGCATACATACATGATACAATACAAAGAAAACCCAATGATCTTCTAAATTGGTTCTTTAT
TTCTTTAGGAATTGTGATTAGTAGGTTGGGAGATGGGGACGGCAAGACATGCGTCTTTGTATAATTCTGATTCTTTTCAACAATTAGAGAGACACTTTTTCCCCACCATTGTACATCAATGAGCTAGTCACCAGTCATCAGGACAAGGTGCACGCTCAATCTTTGGGATCCTTCAGAATGGCAAGGTTCTGGTCATTTTA
ACATTTTATTGTCAAGATACCCTTGTAGTCAATCTATCGGCGTACATGAATGAAAATGGGTTCCTTTGAAGGATGTTGCGTTGGACCCCCACATACAGTGAAATGGGGCGTAAAAGCCTCTTGAGCATTTTGTAAATGATTTTTGAAGAATGTGATGGTTTTCATCCTGAAAACCCAGGTCTTATGTGTTCAATAATGCG
GTTTGCTCTGTTCTCCAATGATTTAACATAACTTTTCTTTAAAAGTTTTCTCTGTAAGATTCCAATTTTGATTTTAGAACTGTACATTTTGGTGACGTCATGTGTCCCCCG
Intron 2 GTCTGTGTTC ... TTGCTTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 30 | 14 | 6 | 6 |
| A2 | 19.57 | 37 | 7 | 9 |
| A3 | 9.09 | 30 | 11.5 | 3 |
| A4 | 25 | 36 | 0.5 | 12 |
| A5 | 5.88 | 16 | 4 | 1 |
| A6 | 16.67 | 90 | 2.5 | 18 |
| A7 | 19.67 | 49 | 2 | 12 |
| A8 | 18.6 | 35 | 0 | 8 |
| A9 | 33.33 | 34 | 0 | 17 |
| A10 | 11.63 | 38 | 0 | 5 |
>TRINITY_DN37040_c0_g1_i2 from sample A8 / Example spliced isoformGTGAAAGATTGTGCGAGGGTTTCTGCGTTCATTTTTTCTCTCTTTTCCCGTTATATTCAATCTTCTCGTAATTTCAGAACAATTCTAACATCATCAATTATTTCTCCAAGATCTTTGCAGAGACCGATCTATTCTCCCTCGGGAATTTTTTTTGGCTTAAAACGCGAGATTTTTCATCTTTTACTTTCTCAATTATTTTT
TCCGCTGCAAGTTTTTATTTGGGGGAGATCATGATTGTCCTGTTGAGCGAATGCGCAGAAGAGCAGGAGATGATCTGGAAAAAAATACCAGTCCAATCTGCGAAAATTTGCAGTGGTTGTTTTTATCCGTGGAGCCCGTGATTCGAACCGCTGACGAATGTGCGCCTTAAGAATGAGGGACATGTCTCTGGACGAAATTT
GTGGCTCGAACAGACTTTCATTTTAGGGGTTTCTTTCCAATTTTGTTCATTTTCAGGTTTTTAAGTGGAGAGTTTCCGGAAAATTGAACCGGAAAAAAATTGTTCTGGAGCGCAGTTTCGAACCCGCGACCTTCTTGGAGACGAATTAGTTCTAACCAGAACTTTTATTCTTACAAGCGTGCTTCTGTGAAATATACGGG
ATTTTCTCTGCAAAAATTTAATCCCGCGGCATCAGAAATCACGTAGAGTTACCAGGTCTTTGAACGCAGAATTTGGAGAAGCAAGGCCGTTTCAATTTCTCGGCTGTGTGCTTTGGATGAGAATGGAAACAGTGATACCCACGCCCGATGCCTGCATGAACCCTTGCAGTTTGCTGGAAGAGACTCCGGCCATGGCCGCA
AGGCGACGCCGGACGGAAATCCGGCGCCTGAAATTGCTGTCCAATAGCGGTAATTTTTCCGATATGGTCAAAAAGCGCACTCGTACACGTAACGATCGGGTTTGCAGTAGTTGTTTCGGGAGGGAGGTGACTTCTTTGGCGGAGGAGGATGCTGAAAATTCATTGGCAATGGAAATTGAAATGCAGTCGCAGACTCTGTA
TCCTGCCAGAAGGCTGGTGAGGTCAGTGTCGACACCTATCGGTTGGAATAGTGGGCTACTTTGCACCTGCCGCGTGGAGAAATTTTGGACGAGTGAGGCCTATGACAAACAAAACAGCATTATTAGTACCCTTGGCAATGAGAAAAACAAATATAACAGTAGCAGCAGCAATAATAATAATAACTCTAATAAGGATAGTA
CCAGTAATGTCGCAGCGGATGCAGAGCCTGTGGATCAAGCTTCAACTCAAAAAGAGGCAACTACTGATAATAAGCCTCAACGAGAGAAACCATCTTCAGAAAATGACAATAATAACAATAGCAAGGCCCCCCCTACACCTCCTCCTCTTCCCGCTGCTGCAAGTAGATGTAACATTCCTGTTCCTGCTACACAGGGATCT
AAACAGCATACTAGTGAGCAGGGTATTTCGTCAAACAGGCCGTTGAAGGGCATAGGCAGGGCTAACAGTGAAAGCATCAGTTTGCTGTTGAAGGATCCATGTCCCCCGCACAGTACGATGTCTGTAATTGGCAGAAGACGTGAAATGGAAGATGCTGTTTCGTCCGTGCCCTCCTTCTTTTCTCTTCCCAAAGCTAGTTC
TCTTGCACTTCTAGATGGGTGCTCTGGATTCGGACCGCCACCGTTGTCTACTGATCTCCACTTCTTTGCTGTCTACGATGGCCATGGTGGTTCTCAGGCCTCAATATTCTGCAAGGACCGTTTCCATGAGGCTCTTGCTGAGGAGTTGAGAAATTCCTCTCCATTTTGCAGAGACTTAAACGATTGGAGTAAAGTGATGT
CTACTTGCTTCACGAAAATAGATATGGCAGTGGGAGGGATGTGTCCAAATGGAAGCTGTGATAGTGGGGATTCACAAAAGACTAGTGATTGTTGCCAAGATCCAGTTGCACCAGAGAACGTGGGTTCAACAGCTGTGGTAGCCATTGTGAGCCCATCTCAACTTGTTATTGCAAACTGTGGAGATTCCAGAGCAGTCTTA
TCAAGGGGAGGCAAAGCTATTCCCCTTTCTAGCGACCATAAGCCTGAACGAGAGGACGAGTTGAGCCGCATTGAAGCTGCTGGTGGACGCGTTATTTTTTGGAATGGATATCGTGTTGGAGGCTTTCTTGCTATGTCAAGAGCCATAGGTGACCGCTTCTTGAAACGGTATGTGATTTCCGAACCAGAAGTAACATGTAC
AGAGCGTACACATGAAGATGAATGTCTGATTTTAGCCAGTGATGGCCTATGGGATGTTTTGTCAAATGATCTTGTCTGTGAAGTTGCTCGAAAATGTCTGGCTGGTTATCGACCTCATCGTTCAAAGGGTATTACTGAAGACACTCCTGTTGGCGCAGCAGCTGCTCTCCTTACAAAATTAGCCTTGGGAAAGGGAAGTG
GAGATAATATTAGTGTAGTTGTAATCGATCTCAAAGAAAGAAGAACTAGAAACAGATAATGATTACTCTGCTTTATATACATATATCTATATATATAGATGCATACATACATGATACAATACAAAGAAAACCCAATGATCTTCTAAATTGGTTCTTTATTTCTTTAGGAATTGTGATTAGTAGGTTGGGAGATGGGGACG
GCAAGACATGCGTCTTTGTATAATTCTGATTCTTTTCAACAATTAGAGAGACACTTTTTCCCCACCATTGTACATCAATGAGCTAGTCACCAGTCATCAGGACAAGGTGCACGCTCAATCTTTGGGATCCTTCAGAATGGCAAGGTTCTGGTCATTTTAACATTTTATTGTCAAGATACCCTTGTAGTCAATCTATCGGC
GTACATGAATGAAAATGGGTTCCTTTGAAGGATGTTGCGTTGGACCCCCACATACAGTGAAATGGGGCGTAAAAGCCTCTTGAGCATTTTGTAAATGATTTTTGAAGAATGTGATGGTTTTCATCCTGAAAACCCAGGTCTTATGTGTTCAATAATGCGGTTTGCTCTGTTCTCCAATGATTTAACATAACTTTTCTTTA
AAAGTTTTCTCTGTAAGATTCCAATTTTGATTTTAGAACTGTACATTTTGGTGACGTCATGTGTCCCCCGTTTAACATATTTTGTAAAAGCTTCCTCTGAAAGATTCTTATTTATCTTGTATAAACTGTATATATTGCTCACCTTATATATCCACGCATATTCTCG
>TRINITY_DN37040_c0_g1_i1 from sample A8 / Example unspliced isoform:GGGAAATTAAGGATTTTTGAACCATCTATTATCTGTAAGGCTTTTCCAGAGCCTAGATCCAATTCTGTAATCCGTGTTTGATGCAGATGCATGATGATTAGCTTTTCATTTGACATTGAGTTAGTTTTTCATTTTTTTTCAGGTAACTAGTAGGCGATTACTTTAATTGGTCCATGTTTTAAGTCCTGATACCAAAGATT
GACAACTTTGTTGAATTGTTTTATTATCATTTCCGGATTTCCAGCTTATTGTGGCCATATGTGTATTGTAGCCTGAACGAGAGGACGAGTTGAGCCGCATTGAAGCTGCTGGTGGACGCGTTATTTTTTGGAATGGATATCGTGTTGGAGGCTTTCTTGCTATGTCAAGAGCCATAGgtctgtgttcctttgtccttttt
tgtaggcatgttcaaaagtattagtggttttcatttgacaaataacacatcatagttttactggatatcttgttgaagaacatggaatgatatcgttttccatgtatgatttgttggatgggttttctactttcaagtttatacagacttaaatttgtttgaaacttggtttatttttgcccaagaaaacttaaaggttt
agtagcgtagcactattcattgttgcccaagaacattggtatttcgagatgtgtggtaaagcgtttctggtactttgctgtcggtttctaattttgtgaagatttgtgtgttaggtatcatcagctctcatgtttgtcgatattggcaataatgataggacaatagtttaatagggtcatgcaatattcccagggtcatg
ctggtcgaaatccgttgaagagctatagtctgtgatattactgtgatatattagcttcttgatcaactacaagtgacataatggataactggctagatgatgtgtaagatagacttttggggtgttttgagttctattctaaagtctttcaagggatgatgttcgtcttctgtttattattacataaattgtaggagcat
gtggtggacaactttgtagaaagaaacaaatccatccaggaaaataagtagatttttcatgtgttgtttaccctgggaacgttaataatgcaattcatctaggatacatagactattgaaggaaacatgaagggaattttaataaggttcacatattaaggatcatctggtcaaatgatttgattatgtggaatgtgcat
tagcgttctctataactgttttgtatttttcttgcttacagGTGACCGCTTCTTGAAACGGTATGTGATTTCCGAACCAGAAGTAACATGTACAGAGCGTACACATGAAGATGAATGTCTGATTTTAGCCAGTGATGGCCTATGGGATGTTTTGTCAAATGATCTTGTCTGTGAAGTTGCTCGAAAATGTCTGGCTGGTT
ATCGACCTCATCGTTCAAAGGGTATTACTGAAGACACTCCTGTTGGCGCAGCAGCTGCTCTCCTTACAAAATTAGCCTTGGGAAAGGGAAGTGGAGATAATATTAGTGTAGTTGTAATCGATCTCAAAGAAAGAAGAACTAGAAACAGATAATGATTACTCTGCTTTATATACATATATCTATATATATAGATGCATACA
TACATGATACAATACAAAGAAAACCCAATGATCTTCTAAATTGGTTCTTTATTTCTTTAGGAATTGTGATTAGTAGGTTGGGAGATGGGGACGGCAAGACATGCGTCTTTGTATAATTCTGATTCTTTTCAACAATTAGAGAGACACTTTTTCCCCACCATTGTACATCAATGAGCTAGTCACCAGTCATCAGGACAAGG
TGCACGCTCAATCTTTGGGATCCTTCAGAATGGCAAGGTTCTGGTCATTTTAACATTTTATTGTCAAGATACCCTTGTAGTCAATCTATCGGCGTACATGAATGAAAATGGGTTCCTTTGAAGGATGTTGCGTTGGACCCCCACATACAGTGAAATGGGGCGTAAAAGCCTCTTGAGCATTTTGTAAATGATTTTTGAAG
AATGTGATGGTTTTCATCCTGAAAACCCAGGTCTTATGTGTTCAATAATGCGGTTTGCTCTGTTCTCCAATGATTTAACATAACTTTTCTTTAAAAGTTTTCTCTGTAAGATTCCAATTTTGATTTTAGAACTGTACATTTTGGTGACGTCATGTGTCCCCCGTTTAACATATTTTGTAAAAGCTTCCTCTGAAAGATTC
TTATTTATCTTGTATAAACTGTATATATTGCTCACCTTATATATCCACGCATATTCTCG
Intron 3 GTATGAGGGA ... TGTATTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 39.13 | 42 | 27 | 2 |
| A2 | 22.58 | 24 | 7 | 9 |
| A3 | 25 | 39 | 13 | 6 |
| A4 | 25.4 | 47 | 16 | 4 |
| A5 | 27.27 | 24 | 9 | 3 |
| A6 | 18.75 | 65 | 15 | 2 |
| A7 | 31.43 | 48 | 22 | 4 |
| A8 | 11.63 | 38 | 5 | 0 |
| A9 | 25 | 18 | 6 | 0 |
| A10 | 22.22 | 28 | 8 | 0 |
>TRINITY_DN100867_c0_g1_i1 from sample A5 / Example spliced isoformAATAACTCTAATAAGGATAGTACCAGTAATGTCGCAGCGGATGCAGAGCCTGTGGATCAAGCTTCAACTCAAAAAGAGGCAACTACTGATAATAAGCCTCAACGAGAGAAACCATCTTCAGAAAATGACAATAATAACAATAGCAAGGCCCCCCCTACACCTCCTCCTCTTCCCGCTGCTGCAAGTAGATGTAACATTCC
TGTTCCTGCTACACAGGGATCTAAACAGCATACTAGTGAGCAGGGTATTTCGTCAAACAGGCCGTTGAAGGGCATAGGCAGGGCTAACAGTGAAAGCATCAGTTTGCTGTTGAAGGATCCATGTCCCCCGCACAGTACGATGTCTGTAATTGGCAGAAGACGTGAAATGGAAGATGCTGTTTCGTCCGTGCCCTCCTTCT
TTTCTCTTCCCAAAGCTAGTTCTCTTGCACTTCTAGATGGGTGCTCTGGATTCGGACCGCCACCGTTGTCTACTGATCTCCACTTCTTTGCTGTCTACGATGGCCATGGTGGTTCTCAGGCCTCAATATTCTGCAAGGACCGTTTCCATGAGGCTCTTGCTGAGGAGTTGAGAAATTCCTCTCCATTTTGCAGAGACTTA
AACGATTGGAGTAAAGTGATGTCTACTTGCTTCACGAAAATAGATATGGCAGTGGGAGGGATGTGTCCAAATGGAAGCTGTGATAGTGGGGATTCACAAAAGACTAGTGATTGTTGCCAAGATCCAGTTGCACCAGAGAACGTGGGTTCAACAGCTGTGGTAGCCATTGTGAGCCCATCTCAACTTGTTATTGCAAACTG
TGGAGATTCCAGAGCAGTCTTATCAAGGGGAGGCAAAGCTATTCCCCTTTCTAGCGACCATAAGCCTGAACGAGAGGACGAGTTGAGCCGCATTGAAGCTGCTGGTGGACGCGTTATTTTTTGGAATGGATATCGTGTTGGAGGCTTTCTTGCTATGTCAAGAGCCATAGGTGACCGCTTCTTGAAACGGTATGTGATTT
CCGAACCAGAAGTAACATGTACAGAGCGTACACATGAAGATGAATGTCTGATTTTAGCCAGTGATGGCCTATGGGATGTTTTGTCAAATGATCTTGTCTGTGAAGTTGCTCGAAAATGTCTGGCTGGTTATCGACCTCATCGTTCAAAGGGTATTACTGAAGACACTCCTGTTGGCGCAGCAGCTGCTCTCCTTACAAAA
TTAGCCTTGGGAAAGGGAAGTGGAGATAATATTAGTGTAGTTGTAATCGATCTCAAAGAAAGAAGAACTAGAAACAGATAATGATTACTCTGCTTTATATACATATATCTATATATATAGATGCATACATACATGATACAATACAAAGAAAACCCAATGATCTTCTAAATTGGTTCTTTATTTCTTTAGGAATTGTGATT
AGTAGGTTGGGAGATGGGGACGGCAAGACATGCGTCTTTGTATAATTCTGATTCTTTTCAACAATTAGAGAGACACTTTTTCCCCACCATTGTACATCAATGAGCTAGTCACCAGTCATCAGGACAAGGTGCACGCTCAATCTTTGGGATCCTTCAGAATGGCAAGGTTCTGGTCATTTTAACATTTTATTGTCAAGATA
CCCTTGTAGTCAATCTATCGGCGTACATGAATGAAAATGGGTTCCTTTGAAGGATGTTGCGTTGGACCCCCACATACAGTGAAATGGGGCGTAAAAGCCTCTTGAGCATTTTGTAAATGATTTTTGAAGAATGTGATGGTTTTCATCCTGAAAACCCAGGTCTTATGTGTTCAATAATGCGGTTTGCTCTGTTCTCCAAT
GATTTAACATAACTTTTCTTTAAAAGTTTTCTCTGTAAGATTCCAATTTTGATTTTAGAACTGTACATTTTGGTGACGTCATGTGTCCCCCGTTTAACATATTTTGTAAAAGCTTCCTCTGAAAGATTCTTATTTATCTTGTATAAACTGTATATATTGCTCACCTTATATATCC
>TRINITY_DN100867_c0_g1_i2 from sample A5 / Example unspliced isoform:AATAACTCTAATAAGGATAGTACCAGTAATGTCGCAGCGGATGCAGAGCCTGTGGATCAAGCTTCAACTCAAAAAGAGGCAACTACTGATAATAAGCCTCAACGAGAGAAACCATCTTCAGAAAATGACAATAATAACAATAGCAAGGCCCCCCCTACACCTCCTCCTCTTCCCGCTGCTGCAAGTAGATGTAACATTCC
TGTTCCTGCTACACAGGGATCTAAACAGCATACTAGTGAGCAGGGTATTTCGTCAAACAGGCCGTTGAAGGGCATAGGCAGGGCTAACAGTGAAAGCATCAGTTTGCTGTTGAAGGATCCATGTCCCCCGCACAGTACGATGTCTGTAATTGGCAGAAGACGTGAAATGGAAGATGCTGTTTCGTCCGTGCCCTCCTTCT
TTTCTCTTCCCAAAGCTAGTTCTCTTGCACTTCTAGATGGGTGCTCTGGATTCGGACCGCCACCGTTGTCTACTGATCTCCACTTCTTTGCTGTCTACGATGGCCATGGTGGTTCTCAGGCCTCAATATTCTGCAAGGACCGTTTCCATGAGGCTCTTGCTGAGGAGTTGAGAAATTCCTCTCCATTTTGCAGAGACTTA
AACGATTGGAGTAAAGTGATGTCTACTTGCTTCACGAAAATAGATATGGCAGTGGGAGGGATGTGTCCAAATGGAAGCTGTGATAGTGGGGATTCACAAAAGACTAGTGATTGTTGCCAAGATCCAGTTGCACCAGAGAACGTGGGTTCAACAGCTGTGGTAGCCATTGTGAGCCCATCTCAACTTGTTATTGCAAACTG
TGGAGATTCCAGAGCAGTCTTATCAAGGGGAGGCAAAGCTATTCCCCTTTCTAGCGACCATAAGgtatgagggaaattaaggatttttgaaccatctattatctgtaaggcttttccagagcctagatccaattctgtaatccgtgtttgatgcagatgcatgatgattagcttttcatttgacattgagttagtttttc
attttttttcaggtaactagtaggcgattactttaattggtccatgttttaagtcctgataccaaagattgacaactttgttgaattgttttattatcatttccggatttccagcttattgtggccatatgtgtattgtagCCTGAACGAGAGGACGAGTTGAGCCGCATTGAAGCTGCTGGTGGACGCGTTATTTTTTG
GAATGGATATCGTGTTGGAGGCTTTCTTGCTATGTCAAGAGCCATAGGTCTGTGTTCCTTTGTCCTTTTTTGTAGGCATGTTCAAAAGTATTAGTGGTTTTCATTTGACAAATAACACATCATAGTTTTACTGGATATCTTGTTGAAGAACATGGAATGATATCGTTTTCCATGTATGATTTGTTGGATGGGTTTTCTAC
TTTCAAGTTTATACAGACTTAAATTTGTTTGAAACTTGGTTTATTTTTGCCCAAGAAAACTTAAAGGTTTAGTAGCGTAGCACTATTCATTGTTGCCCAAGAACATTGGTATTTCGAGATGTGTGGTAAAGCGTTTCTGGTACTTTGCTGTCGGTTTCTAATTTTGTGAAGATTTGTGTGTTAGGTATCATCAGCTC
Intron 4 GTAACTAGTA ... TGTATTGTAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 2 | 2 |
| A2 | 80 | 2 | 7 | 9 |
| A3 | 71.43 | 2 | 4 | 6 |
| A4 | 55.56 | 2 | 1 | 4 |
| A5 | 55.56 | 2 | 2 | 3 |
| A6 | 100 | 0 | 1 | 2 |
| A7 | 100 | 0 | 1 | 4 |
| A8 | 0 | 1 | 0 | 0 |
| A9 | 100 | 0 | 6 | 0 |
| A10 | 100 | 0 | 2 | 0 |
>TRINITY_DN37040_c0_g1_i3 from sample A8 / Example spliced isoformTTCCCCTTTCTAGCGACCATAAGATGCATGATGATTAGCTTTTCATTTGACATTGAGTTAGTTTTTCATTTTTTTTCAGCCTGAACGAGAGGACGAGTTGAGCCGCATTGAAGCTGCTGGTGGACGCGTTATTTTTTGGAATGGATATCGTGTTGGAGGCTTTCTTGCTATGTCAAGAGCCATAGGTCTGTGTTCCTTTG
TCCTTTTTTGTAGGCATGTTCAAAAGTATTAGTGGTTTTCATTTGACAAATAACACATCATAGTTTTACTGGATATCTTGTTGAAGAACATGGAATGATATCGTTTTCCATGTATGATTTGTTGGATGGGTTTTCTACTTTCAAGTTTATACAGACTTAAATTTGTTTGAAACTTGGTTTATTTTTGCCCAAGAAAACTT
AAAGGTTTAGTAGCGTAGCACTATTCATTGTTGCCCAAGAACATTGGTATTTCGAGATGTGTGGTAAAGCGTTTCTGGTACTTTGCTGTCGGTTTCTAATTTTGTGAAGATTTGTGTGTTAGGTATCATCAGCTCTCATGTTTGTCGATATTGGCAATAATGATAGGACAATAGTTTAATAGGGTCATGCAATATTCCCA
GGGTCATGCTGGTCGAAATCCGTTGAAGAGCTATAGTCTGTGATATTACTGTGATATATTAGCTTCTTGATCAACTACAAGTGACATAATGGATAACTGGCTAGATGATGTGTAAGATAGACTTTTGGGGTGTTTTGAGTTCTATTCTAAAGTCTTTCAAGGGATGATGTTCGTCTTCTGTTTATTATTACATAAATTGT
AGGAGCATGTGGTGGACAACTTTGTAGAAAGAAACAAATCCATCCAGGAAAATAAGTAGATTTTTCATGTGTTGTTTACCCTGGGAACGTTAATAATGCAATTCATCTAGGATACATAGACTATTGAAGGAAACATGAAGGGAATTTTAATAAGGTTCACATATTAAGGATCATCTGGTCAAATGATTTGATTATGTGGA
ATGTGCATTAGCGTTCTCTATAACTGTTTTGTATTTTTCTTGCTTACAGGTGACCGCTTCTTGAAACGGTATGTGATTTCCGAACCAGAAGTAACATGTACAGAGCGTACACATGAAGATGAATGTCTGATTTTAGCCAGTGATGGCCTATGGGATGTTTTGTCAAATGATCTTGTCTGTGAAGTTGCTCGAAAATGTCT
GGCTGGTTATCGACCTCATCGTTCAAAGGGTATTACTGAAGACACTCCTGTTGGCGCAGCAGCTGCTCTCCTTACAAAATTAGCCTTGGGAAAGGGAAGTGGAGATAATATTAGTGTAGTTGTAATCGATCTCAAAGAAAGAAGAACTAGAAACAGATAATGATTACTCTGCTTTATATACATATATCTATATATATAGA
TGCATACATACATGATACAATACAAAGAAAACCCAATGATCTTCTAAATTGGTTCTTTATTTCTTTAGGAATTGTGATTAGTAGGTTGGGAGATGGGGACGGCAAGACATGCGTCTTTGTATAATTCTGATTCTTTTCAACAATTAGAGAGACACTTTTTCCCCACCATTGTACATCAATGAGCTAGTCACCAGTCATCA
GGACAAGGTGCACGCTCAATCTTTGGGATCCTTCAGAATGGCAAGGTTCTGGTCATTTTAACATTTTATTGTCAAGATACCCTTGTAGTCAATCTATCGGCGTACATGAATGAAAATGGGTTCCTTTGAAGGATGTTGCGTTGGACCCCCACATACAGTGAAATGGGGCGTAAAAGCCTCTTGAGCATTTTGTAAATGAT
TTTTGAAGAATGTGATGGTTTTCATCCTGAAAACCCAGGTCTTATGTGTTCAATAATGCGGTTTGCTCTGTTCTCCAATGATTTAACATAACTTTTCTTTAAAAGTTTTCTCTGTAAGATTCCAATTTTGATTTTAGAACTGTACATTTTGGTGACGTCATGTGTCCCCCGTTTAACATATTTTGTAAAAGCTTCCTCTG
AAAGATTCTTATTTATCTTGTATAAACTGTATATATTGCTCACCTTATATATCCACGCATATTCTCG
>TRINITY_DN37040_c0_g1_i1 from sample A8 / Example unspliced isoform:GGGAAATTAAGGATTTTTGAACCATCTATTATCTGTAAGGCTTTTCCAGAGCCTAGATCCAATTCTGTAATCCGTGTTTGATGCAGATGCATGATGATTAGCTTTTCATTTGACATTGAGTTAGTTTTTCATTTTTTTTCAGgtaactagtaggcgattactttaattggtccatgttttaagtcctgataccaaagatt
gacaactttgttgaattgttttattatcatttccggatttccagcttattgtggccatatgtgtattgtagCCTGAACGAGAGGACGAGTTGAGCCGCATTGAAGCTGCTGGTGGACGCGTTATTTTTTGGAATGGATATCGTGTTGGAGGCTTTCTTGCTATGTCAAGAGCCATAGGTCTGTGTTCCTTTGTCCTTTTT
TGTAGGCATGTTCAAAAGTATTAGTGGTTTTCATTTGACAAATAACACATCATAGTTTTACTGGATATCTTGTTGAAGAACATGGAATGATATCGTTTTCCATGTATGATTTGTTGGATGGGTTTTCTACTTTCAAGTTTATACAGACTTAAATTTGTTTGAAACTTGGTTTATTTTTGCCCAAGAAAACTTAAAGGTTT
AGTAGCGTAGCACTATTCATTGTTGCCCAAGAACATTGGTATTTCGAGATGTGTGGTAAAGCGTTTCTGGTACTTTGCTGTCGGTTTCTAATTTTGTGAAGATTTGTGTGTTAGGTATCATCAGCTCTCATGTTTGTCGATATTGGCAATAATGATAGGACAATAGTTTAATAGGGTCATGCAATATTCCCAGGGTCATG
CTGGTCGAAATCCGTTGAAGAGCTATAGTCTGTGATATTACTGTGATATATTAGCTTCTTGATCAACTACAAGTGACATAATGGATAACTGGCTAGATGATGTGTAAGATAGACTTTTGGGGTGTTTTGAGTTCTATTCTAAAGTCTTTCAAGGGATGATGTTCGTCTTCTGTTTATTATTACATAAATTGTAGGAGCAT
GTGGTGGACAACTTTGTAGAAAGAAACAAATCCATCCAGGAAAATAAGTAGATTTTTCATGTGTTGTTTACCCTGGGAACGTTAATAATGCAATTCATCTAGGATACATAGACTATTGAAGGAAACATGAAGGGAATTTTAATAAGGTTCACATATTAAGGATCATCTGGTCAAATGATTTGATTATGTGGAATGTGCAT
TAGCGTTCTCTATAACTGTTTTGTATTTTTCTTGCTTACAGGTGACCGCTTCTTGAAACGGTATGTGATTTCCGAACCAGAAGTAACATGTACAGAGCGTACACATGAAGATGAATGTCTGATTTTAGCCAGTGATGGCCTATGGGATGTTTTGTCAAATGATCTTGTCTGTGAAGTTGCTCGAAAATGTCTGGCTGGTT
ATCGACCTCATCGTTCAAAGGGTATTACTGAAGACACTCCTGTTGGCGCAGCAGCTGCTCTCCTTACAAAATTAGCCTTGGGAAAGGGAAGTGGAGATAATATTAGTGTAGTTGTAATCGATCTCAAAGAAAGAAGAACTAGAAACAGATAATGATTACTCTGCTTTATATACATATATCTATATATATAGATGCATACA
TACATGATACAATACAAAGAAAACCCAATGATCTTCTAAATTGGTTCTTTATTTCTTTAGGAATTGTGATTAGTAGGTTGGGAGATGGGGACGGCAAGACATGCGTCTTTGTATAATTCTGATTCTTTTCAACAATTAGAGAGACACTTTTTCCCCACCATTGTACATCAATGAGCTAGTCACCAGTCATCAGGACAAGG
TGCACGCTCAATCTTTGGGATCCTTCAGAATGGCAAGGTTCTGGTCATTTTAACATTTTATTGTCAAGATACCCTTGTAGTCAATCTATCGGCGTACATGAATGAAAATGGGTTCCTTTGAAGGATGTTGCGTTGGACCCCCACATACAGTGAAATGGGGCGTAAAAGCCTCTTGAGCATTTTGTAAATGATTTTTGAAG
AATGTGATGGTTTTCATCCTGAAAACCCAGGTCTTATGTGTTCAATAATGCGGTTTGCTCTGTTCTCCAATGATTTAACATAACTTTTCTTTAAAAGTTTTCTCTGTAAGATTCCAATTTTGATTTTAGAACTGTACATTTTGGTGACGTCATGTGTCCCCCGTTTAACATATTTTGTAAAAGCTTCCTCTGAAAGATTC
TTATTTATCTTGTATAAACTGTATATATTGCTCACCTTATATATCCACGCATATTCTCG
Intron 5 GCCTCAATAT ... CATTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 70 | 6 | 13 | 15 |
| A2 | 66.67 | 10 | 16 | 24 |
| A3 | 59.32 | 12 | 15 | 20 |
| A4 | 72.04 | 13 | 34 | 33 |
| A5 | 66.67 | 7 | 16 | 12 |
| A6 | 58.82 | 21 | 37 | 23 |
| A7 | 64.1 | 14 | 26 | 24 |
| A8 | 95.65 | 1 | 20 | 24 |
| A9 | 60 | 10 | 13 | 17 |
| A10 | 74.07 | 7 | 19 | 21 |
>TRINITY_DN40129_c0_g1_i4 from sample A9 / Example spliced isoformGTCCATTCATGAGCATCATGCATCCATGCATGCCGCATGGCCCTTCGATAACCGGGTAGACCAAGATCCTGACAAGCGCAATATTCACAGAGGGCGTGAAAGATTGTGCGAGGGTTTCTGCGTTCATTTTTTCTCTCTTTTCCCGTTATATTCAATCTTCTCGTAATTTCAGAACAATTCTAACATCATCAATTATTTCT
CCAAGATCTTTGCAGAGACCGATCTATTCTCCCTCGGGAATTTTTTTTGGCTTAAAACGCGAGATTTTTCATCTTTTACTTTCTCAATTATTTTTTCCGCTGCAAGTTTTTATTTGGGGGAGATCATGATTGTCCTGTTGAGCGAATGCGCAGAAGAGCAGGAGATGATCTGGAAAAAAATACCAGTCCAATCTGCGAAA
ATTTGCAGTGGTTGTTTTTATCCGTGGAGCCCGTGATTCGAACCGCTGACGAATGTGCGCCTTAAGAATGAGGGACATGTCTCTGGACGAAATTTGTGGCTCGAACAGACTTTCATTTTAGGGGTTTCTTTCCAATTTTGTTCATTTTCAGGTTTTTAAGTGGAGAGTTTCCGGAAAATTGAACCGGAAAAAAATTGTTC
TGGAGCGCAGTTTCGAACCCGCGACCTTCTTGGAGACGAATTAGTTCTAACCAGAACTTTTATTCTTACAAGCGTGCTTCTGTGAAATATACGGGATTTTCTCTGCAAAAATTTAATCCCGCGGCATCAGAAATCACGTAGAGTTACCAGGTCTTTGAACGCAGAATTTGGAGAAGCAAGGCCGTTTCAATTTCTCGGCT
GTGTGCTTTGGATGAGAATGGAAACAGTGATACCCACGCCCGATGCCTGCATGAACCCTTGCAGTTTGCTGGAAGAGACTCCGGCCATGGCCGCAAGGCGACGCCGGACGGAAATCCGGCGCCTGAAATTGCTGTCCAATAGCGGTAATTTTTCCGATATGGTCAAAAAGCGCACTCGTACACGTAACGATCGGGTTTGC
AGTAGTTGTTTCGGGAGGGAGGTGACTTCTTTGGCGGAGGAGGATGCTGAAAATTCATTGGCAATGGAAATTGAAATGCAGTCGCAGACTCTGTATCCTGCCAGAAGGCTGGTGAGGTCAGTGTCGACACCTATCGGTTGGAATAGTGGGCTACTTTGCACCTGCCGCGTGGAGAAATTTTGGACGAGTGAGGCCTATGA
CAAACAAAACAGCATTATTAGTACCCTTGGCAATGAGAAAAACAAATATAACAGTAGCAGCAGCAATAATAATAATAACTCTAATAAGGATAGTACCAGTAATGTCGCAGCGGATGCAGAGCCTGTGGATCAAGCTTCAACTCAAAAAGAGGCAACTACTGATAATAAGCCTCAACGAGAGAAACCATCTTCAGAAAATG
ACAATAATAACAATAGCAAGGCCCCCCCTACACCTCCTCCTCTTCCCGCTGCTGCAAGTAGATGTAACATTCCTGTTCCTGCTACACAGGGATCTAAACAGCATACTAGTGAGCAGGGTATTTCGTCAAACAGGCCGTTGAAGGGCATAGGCAGGGCTAACAGTGAAAGCATCAGTTTGCTGTTGAAGGATCCATGTCCC
CCGCACAGTACGATGTCTGTAATTGGCAGAAGACGTGAAATGGAAGATGCTGTTTCGTCCGTGCCCTCCTTCTTTTCTCTTCCCAAAGCTAGTTCTCTTGCACTTCTAGATGGGTGCTCTGGATTCGGACCGCCACCGTTGTCTACTGATCTCCACTTCTTTGCTGTCTACGATGGCCATGGTGGTTCTCAGAGACTTAA
ACGATTGGAGTAAAGTGATGTCTACTTGCTTCACGAAAATAGATATGGCAGTGGGAGGGATGTGTCCAAATGGAAGCTGTGATAGTGGGGATTCACAAAAGACTAGTGATTGTTGCCAAGATCCAGTTGCACCAGAGAACGTGGGTTCAACAGCTGTGGTAGCCATTGTGAGCCCATCTCAACTTGTTATTGCAAACTGT
GGAGATTCCAGAGCAGTCTTATCAAGGGGAGGCAAAGCTATTCCCCTTTCTAGCGACCATAAGCCTGAACGAGAGGACGAGTTGAGCCGCATTGAAGCTGCTGGTGGACGCGTTATTTTTTGGAATGGATATCGTGTTGGAGGCTTTCTTGCTATGTCAAGAGCCATAGGTGACCGCTTCTTGAAACGGTATGTGATTTC
CGAACCAGAAGTAACATGTACAGAGCGTACACATGAAGATGAATGTCTGATTTTAGCCAGTGATGGCCTATGGGATGTTTTGTCAAATGATCTTGTCTGTGAAGTTGCTCGAAAATGTCTGGCTGGTTATCGACCTCATCGTTCAAAGGGTATTACTGAAGACACTCCTGTTGGCGCAGCAGCTGCTCTCCTTACAAAAT
TAGCCTTGGGAAAGGGAAGTGGAGATAATATTAGTGTAGTTGTAATCGATCTCAAAGAAAGAAGAACTAGAAACAGATAATGATTACTCTGCTTTATATACATATATCTATATATATAGATGCATACATACATGATACAATACAAAGAAAACCCAATGATCTTCTAAATTGGTTCTTTATTTCTTTAGGAATTGTGATTA
GTAGGTTGGGAGATGGGGACGGCAAGACATGCGTCTTTGTATAATTCTGATTCTTTTCAACAATTAGAGAGACACTTTTTCCCCACCATTGTACATCAATGAGCTAGTCACCAGTCATCAGGACAAGGTGCACGCTCAATCTTTGGGATCCTTCAGAATGGCAAGGTTCTGGTCATTTTAACATTTTATTGTCAAGATAC
CCTTGTAGTCAATCTATCGGCGTACATGAATGAAAATGGGTTCCTTTGAAGGATGTTGCGTTGGACCCCCACATACAGTGAAATGGGGCGTAAAAGCCTCTTGAGCATTTTGTAAATGATTTTTGAAGAATGTGATGGTTTTCATCCTGAAAACCCAGGTCTTATGTGTTCAATAATGCGGTTTGCTCTGTTCTCCAATG
ATTTAACATAACTTTTCTTTAAAAGTTTTCTCTGTAAGATTCCAATTTTGATTTTAGAACTGTACATTTTGGTGACGTCATGTGTCCCCCGTTTAACATATTTTGTAAAAGCTTCCTCTGAAAGATTCTTATTTATCTTGTATAAACTGTATATATTGC
>TRINITY_DN40129_c0_g1_i5 from sample A9 / Example unspliced isoform:GTCCATTCATGAGCATCATGCATCCATGCATGCCGCATGGCCCTTCGATAACCGGGTAGACCAAGATCCTGACAAGCGCAATATTCACAGAGGGCGTGAAAGATTGTGCGAGGGTTTCTGCGTTCATTTTTTCTCTCTTTTCCCGTTATATTCAATCTTCTCGTAATTTCAGAACAATTCTAACATCATCAATTATTTCT
CCAAGATCTTTGCAGAGACCGATCTATTCTCCCTCGGGAATTTTTTTTGGCTTAAAACGCGAGATTTTTCATCTTTTACTTTCTCAATTATTTTTTCCGCTGCAAGTTTTTATTTGGGGGAGATCATGATTGTCCTGTTGAGCGAATGCGCAGAAGAGCAGGAGATGATCTGGAAAAAAATACCAGTCCAATCTGCGAAA
ATTTGCAGTGGTTGTTTTTATCCGTGGAGCCCGTGATTCGAACCGCTGACGAATGTGCGCCTTAAGAATGAGGGACATGTCTCTGGACGAAATTTGTGGCTCGAACAGACTTTCATTTTAGGGGTTTCTTTCCAATTTTGTTCATTTTCAGGTTTTTAAGTGGAGAGTTTCCGGAAAATTGAACCGGAAAAAAATTGTTC
TGGAGCGCAGTTTCGAACCCGCGACCTTCTTGGAGACGAATTAGTTCTAACCAGAACTTTTATTCTTACAAGCGTGCTTCTGTGAAATATACGGGATTTTCTCTGCAAAAATTTAATCCCGCGGCATCAGAAATCACGTAGAGTTACCAGGTCTTTGAACGCAGAATTTGGAGAAGCAAGGCCGTTTCAATTTCTCGGCT
GTGTGCTTTGGATGAGAATGGAAACAGTGATACCCACGCCCGATGCCTGCATGAACCCTTGCAGTTTGCTGGAAGAGACTCCGGCCATGGCCGCAAGGCGACGCCGGACGGAAATCCGGCGCCTGAAATTGCTGTCCAATAGCGGTAATTTTTCCGATATGGTCAAAAAGCGCACTCGTACACGTAACGATCGGGTTTGC
AGTAGTTGTTTCGGGAGGGAGGTGACTTCTTTGGCGGAGGAGGATGCTGAAAATTCATTGGCAATGGAAATTGAAATGCAGTCGCAGACTCTGTATCCTGCCAGAAGGCTGGTGAGGTCAGTGTCGACACCTATCGGTTGGAATAGTGGGCTACTTTGCACCTGCCGCGTGGAGAAATTTTGGACGAGTGAGGCCTATGA
CAAACAAAACAGCATTATTAGTACCCTTGGCAATGAGAAAAACAAATATAACAGTAGCAGCAGCAATAATAATAATAACTCTAATAAGGATAGTACCAGTAATGTCGCAGCGGATGCAGAGCCTGTGGATCAAGCTTCAACTCAAAAAGAGGCAACTACTGATAATAAGCCTCAACGAGAGAAACCATCTTCAGAAAATG
ACAATAATAACAATAGCAAGGCCCCCCCTACACCTCCTCCTCTTCCCGCTGCTGCAAGTAGATGTAACATTCCTGTTCCTGCTACACAGGGATCTAAACAGCATACTAGTGAGCAGGGTATTTCGTCAAACAGGCCGTTGAAGGGCATAGGCAGGGCTAACAGTGAAAGCATCAGTTTGCTGTTGAAGGATCCATGTCCC
CCGCACAGTACGATGTCTGTAATTGGCAGAAGACGTGAAATGGAAGATGCTGTTTCGTCCGTGCCCTCCTTCTTTTCTCTTCCCAAAGCTAGTTCTCTTGCACTTCTAGATGGGTGCTCTGGATTCGGACCGCCACCGTTGTCTACTGATCTCCACTTCTTTGCTGTCTACGATGGCCATGGTGGTTCTCAGgcctcaat
attctgcaaggaccgtttccatgaggctcttgctgaggagttgagaaattcctctccattttgcagAGACTTAAACGATTGGAGTAAAGTGATGTCTACTTGCTTCACGAAAATAGATATGGCAGTGGGAGGGATGTGTCCAAATGGAAGCTGTGATAGTGGGGATTCACAAAAGACTAGTGATTGTTGCCAAGATCCAG
TTGCACCAGAGAACGTGGGTTCAACAGCTGTGGTAGCCATTGTGAGCCCATCTCAACTTGTTATTGCAAACTGTGGAGATTCCAGAGCAGTCTTATCAAGGGGAGGCAAAGCTATTCCCCTTTCTAGCGACCATAAGCCTGAACGAGAGGACGAGTTGAGCCGCATTGAAGCTGCTGGTGGACGCGTTATTTTTTGGAAT
GGATATCGTGTTGGAGGCTTTCTTGCTATGTCAAGAGCCATAGGTGACCGCTTCTTGAAACGGTATGTGATTTCCGAACCAGAAGTAACATGTACAGAGCGTACACATGAAGATGAATGTCTGATTTTAGCCAGTGATGGCCTATGGGATGTTTTGTCAAATGATCTTGTCTGTGAAGTTGCTCGAAAATGTCTGGCTGG
TTATCGACCTCATCGTTCAAAGGGTATTACTGAAGACACTCCTGTTGGCGCAGCAGCTGCTCTCCTTACAAAATTAGCCTTGGGAAAGGGAAGTGGAGATAATATTAGTGTAGTTGTAATCGATCTCAAAGAAAGAAGAACTAGAAACAGATAATGATTACTCTGCTTTATATACATATATCTATATATATAGATGCATA
CATACATGATACAATACAAAGAAAACCCAATGATCTTCTAAATTGGTTCTTTATTTCTTTAGGAATTGTGATTAGTAGGTTGGGAGATGGGGACGGCAAGACATGCGTCTTTGTATAATTCTGATTCTTTTCAACAATTAGAGAGACACTTTTTCCCCACCATTGTACATCAATGAGCTAGTCACCAGTCATCAGGACAA
GGTGCACGCTCAATCTTTGGGATCCTTCAGAATGGCAAGGTTCTGGTCATTTTAACATTTTATTGTCAAGATACCCTTGTAGTCAATCTATCGGCGTACATGAATGAAAATGGGTTCCTTTGAAGGATGTTGCGTTGGACCCCCACATACAGTGAAATGGGGCGTAAAAGCCTCTTGAGCATTTTGTAAATGATTTTTGA
AGAATGTGATGGTTTTCATCCTGAAAACCCAGGTCTTATGTGTTCAATAATGCGGTTTGCTCTGTTCTCCAATGATTTAACATAACTTTTCTTTAAAAGTTTTCTCTGTAAGATTCCAATTTTGATTTTAGAACTGTACATTTTGGTGACGTCATGTGTCCCCCGTTTAACATATTTTGTAAAAGCTTCCTCTGAAAGAT
TCTTATTTATCTTGTATAAACTGTATATATTGC