sp|Q9LIG0|Y3136_ARATH ----> Clavaminate synthase-like protein At3g21360

Intron 1 GTATGTGCAA ... TGATAAGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	53.85	3	1	6
A2	42.86	2	3	0
A3	53.85	3	2	5
A4	50	3	2	4
A5	50	1	1	1
A6	44	21	8	25
A7	51.94	31	37	30
A8	45.71	38	26	38
A9	44.26	34	23	31
A10	52.94	16	14	22

>TRINITY_DN40637_c0_g1_i9 from sample A9 / Example spliced isoform

CTGCTAAACAAGATCAACAGAGAGGTCTTAGTGAGGACTCCAAAAAGGAGTGTGGGTCCCACCCATTTGGCAAACAAACATTTTCTTAATTTTGTACGAGGACTATCTTTATAGACTTCCGGTGCAAACCCTCGTTCTTTTTATTGGCTCGTTCTTCTACTAGAGCCTAAGCTTCTCTCAGGTTTCATATTTCGTATTGT
TTATGTCCGATGACTGTACATGGAGAGTCCGGAGACTGCAACTGGATCCTTTGCAACCATGCAAGGTTTCTTAGAAGGGCGAGTAGCAGAGCAGAAGATGATGATTGCTGGAATGCCAGAAGAAAATAGATTATTCCCCAAGGTTCTGCTCCCTGCTCATGAATACAGTACTTCTGATGATCGCAAAGGAGAGATTGCAC
ATATAACCCAGACCATACGCTTCAACAGAGAATGGATACAGCATCAGCTCATGGAACACAACGCTCTGCTTTTCAGAAGATTCCCTCTCAGATCGGCCGCAGATTTCAGGTCATTTGTGGAAGCGTTTGGATGGGAAGAGGAGCGATATGTGGGTTTTGCTCCGAGAAATAAGGTAGAGGACAGAGTCTTCACCGCCAAC
GAGGCTCCCCTGAATCTGCAGATAGAGTTCCACCATGAAATGGCTTGGATGAAGGCGTGGCCGTCTAAGCTGTTTTTCTTTTGCGAGACAGCACCTCCAGAGGGTGGACAGAGTGCCATAGCTCTCAGCCACAGAATTTACCAGCGCATGTAAGACATAATGCCAGAATTTGTAAGAAGAGTGAAGGATGCAGGGTTGGT
CCTGTCTATAGTAACTACTCCTACGCAAAACGATTTTCTTGAAACGAACGACCCAAGCGAAGCAAAAAAGAGAGCTGCAGACATGATGGGCTGTTCGAACTTTGAGTCCTTCGAGGATGGATCAGCAGAATTCGTGTTCGGTCCTTTGGAGGCAATCAGAGCGTTTGAGGGATACGGAGGGAGGCGAGTCTGGTTTAACA
CCATAGCCGGCTATGGCCAAAGAAACCTGTCACTGTCTTTCGGAGACGGGTGTGAAATTCCTGGGGAAGCAGCCGAGGCATTCAAGGCCATAGTTGATGAAGAGTGCGTAAATTTGAGTTGGGAAGAAGGGGATGTGTTGTTGCTGGACAACCTGGCTGTTCAGCATGCGAGAAGGCCTTCAAAGCCTCCACGTCGAGTC
CTGGTTGCTATGTGCAAGTAGAGGTTGTTATGATATAATTTTAGTTTATTCTAAAAGGTGGAATTAGTAAAAAATTATTTGGTTTGTTTTAAAATGTTATTTTTATGTTTGAAAAGTTTTAATAAAAGTAGTTATAAACTCTCTTAACTTAAAAAGGTTACGAAGGTTTATATGCTAATAATTATTTTCAAATCATAGCT
TAAAAAGGTTACGAAGGTTTA

>TRINITY_DN40637_c0_g1_i4 from sample A9 / Example unspliced isoform:

CTGCTAAACAAGATCAACAGAGAGGTCTTAGTGAGGACTCCAAAAAGGAGTGTGGGTCCCACCCATTTGGCAAACAAACATTTTCTTAATTTTGTACGAGGACTATCTTTATAGACTTCCGGTGCAAACCCTCGTTCTTTTTATTGGCTCGTTCTTCTACTAGAGCCTAAGCTTCTCTCAGGTTTCATATTTCGTATTGT
TTATGTCCGATGACTGTACATGGAGAGTCCGGAGACTGCAACTGGATCCTTTGCAACCATGCAAGGTTTCTTAGAAGGGCGAGTAGCAGAGCAGAAGATGATGATTGCTGGAATGCCAGAAGAAAATAGATTATTCCCCAAGGTTCTGCTCCCTGCTCATGAATACAGTACTTCTGATGATCGCAAAGGAGAGATTGCAC
ATATAACCCAGACCATACGCTTCAACAGAGAATGGATACAGCATCAGCTCATGGAACACAACGCTCTGCTTTTCAGAAGATTCCCTCTCAGATCGGCCGCAGATTTCAGGTCATTTGTGGAAGCGTTTGGATGGGAAGAGGAGCGATATGTGGGTTTTGCTCCGAGAAATAAGGTAGAGGACAGAGTCTTCACCGCCAAC
GAGGCTCCCCTGAATCTGCAGATAGAGTTCCACCATGAAATGGCTTGGCACCTCCAGAGGGTGGACAGAGTGCCATAGCTCTCAGCCACAGAATTTACCAGCGCATGTAAGACATAATGCCAGAATTTGTAAGAAGAGTGAAGGATGCAGGGTTGGTCCTGTCTATAGTAACTACTCCTACGCAAAACGATTTTCTTGAA
ACGAACGACCCAAGCGAAGCAAAAAAGAGgtatgtgcaaagtagcaagcattaactagcataaatccatttaaagtaccaggggtataagcttcacaatctcaaaacctcaatatccacttcgtatgagtatatatcaatatcaaacccgactatcagttcacagttttaaggtgtgtatccttttatccaaactgatga
cattcacaggcccagggttgatatcaaacctgcatatcaacttgacataattttgagggccataccaaaccccgtgtttagatgagcttgtcataatttatcatatcagtgtacttaaactcatgatctgattcttaattttgtggttcagttaatattattttcaaagtttaacctccatttgagtaaatgataagcag


AGCTGCAGACATGATGGGCTGTTCGAACTTTGAGTCCTTCGAGGATGGATCAGCAGAATTCGTGTTCGGTCCTTTGGAGGCAATCAGAGCGTTTGAGGGATACGGAGGGAGGCGAGTCTGGTTTAACACCATAGCCGGCTATGGCCAAAGAAACCTGTCACTGTCTTTCGGAGACGGGTGTGAAATTCCTGGGGAAGCAG
CCGAGGCATTCAAGGCCATAGTTGATGAAGAGTGCGTAAATTTGAGTTGGGAAGAAGGGGATGTGTTGTTGCTGGACAACCTGGCTGTTCAGCATGCGAGAAGGCCTTCAAAGCCTCCACGTCGAGTCCTGGTTGCTATGTGCAAGTAGAGGTTGTTATGATATAATTTTAGTTTATTCTAAAAGGTGGAATTAGTAAAA
AATTATTTGGTTTGTTTTAAAATGTTATTTTTATGTTTGAAAAGTTTTAATAAAAGTAGTTATAAACTCTCTTAACTTAAAAAGGTTACGAAGGTTTATATGCTAATAATTATTTTCAAATCATAGCTTAAAAAGGTTACGAAGGTTTA

Intron 2 GCAAACTTCA ... ATGTGTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	45.29	331.3	246.6	301
A2	46.7	275.1	197.6	284
A3	43	333.3	205.1	297
A4	41.08	230.5	150.4	170
A5	39.85	147.5	82.1	113
A6	42.46	724.1	415.7	652
A7	42.58	1532.8	880.7	1389.3
A8	43.87	1306.3	821.2	1217.6
A9	43.9	1486.3	959.5	1361.9
A10	45.16	1266	837.9	1243.7

>TRINITY_DN123269_c11_g3_i2 from sample A1 / Example spliced isoform

CCTTAGCCAACGAAAATCAAAACCCTTCATCTGCTTGCGACCTTTAAACTACTTCAACCCTCTTCCAACAAGCATTGTTTATTTAACCATTCCAACCTGCACAATTTCTATGGATAGCAGCCCTCATCGTTTTGAATTTTGGGTAGAAAAGGGGTGCGAAAGATTTATTATTCCACTCTGGGCAGAGGGCAGGAGTGCGC
GACGGTCAGTCTTTTCTCTCCGCCCTCAAGCTCGATCATTCATTAGTTCATTCTGTACTCCAAATTGAATTAACGATGGTGGTTGCTCCGGCTGGCAATTCTTTTAACAAGGAAGTAGCCATCAGAAGAAGAATAACCAACATATACAATAAAAGAGAGGAAGACTTCCCGTCACTTCGAGATTACAATGACTATTTAGA
GGAGGTTGAGGACATGACATATAAGCTGGTGGAAGGAATAGATGTTCCAGCAATTGAAGCAAATATTGCAAAGTATCAGGAAGAAAATGCGGAACAGATAATAAATTCTCGGGCCCGCAAGGCTGAAGAACTAGCGAAATCTCTGAGGGAACATCAAACACAAGCTGCAACAGAGGGTCCTTCTGATATGGTTCCAGACC
AGAATTCTCAGGCAGTTGGAGCAACTGGAGGTGGACAATATGCTCCTTCCATTGCAGCACCTATGTTCATGCAGCCAAGACCAACAGGACCTACCGCACAACCAGTGCCTATTGGTGGGGGTAATGCAAGCAGCATGCCAGAGGATGAAGAAACACAAAAGCAGCGTGCAGAAAGAGCAGCAAGGGCAGGAGGGTGGACT
CCTGAAATGTGTAGAAAGAGGGCATTTGAAGAAGCTTTTGGTAGCTTGTGGATCTTTTAGTTCTTGTGTTTTTTTGACCATGCAATATTTTTAGAGGCAGCGTGCAAGCCAGTTGCTAAGGATGTTATTGTACCTCCAAAGAATTAAGTCTTAAAATTGATAAACAAAGAAATTGGGGTTTTCAAGCATGAGGGGAGAAG
CAGCATTTTTTAGTTCCTGTATTCATGTAAGTGTTTTGAAATCTGCAATCAGGCACTTAATTCCGTGGAGGGTAATTTTCAGAGAGGATATTCTATCCCTCCATGCTTAGGTTGCGGGAGGAGCCTCTTTTGTAACCCTTTTGTAACCTTTTTTTGTGAATGACCTTTTTATTTGTAATTTTGTAGTAAGCTTTTGAAAT
AAATTGTCTTTGGAGTTTATTGTTTTGAGTGGACAGACCACCCATCATCCAGGGATACAAATGAAAGCGCGAGATATAAGAGTTGGATTTTGGAATACATAAATTTGAAAGGAGGCTTTGGAATACGTAGATCATTTGTGAGAGTTACAAGAGTTAGCCTTTGGAATACCTAGATTTGAAAGGAGGCTTCTGAATACGTA
GATTAGAAGGGTGGGTGTTAGAAAATAATACTAATTTATTTATTTATTTAATAAAGAGGGAAGTGAGTCAACAAATATATAATAATAAAATTCATAGAAAATAATACTAATTTATTTAATAAAGAGGGGAGTGAGTCAACAAATATATCATAAAAGGTGGAGGGGAATTGTGCTAAAAATAAAATAATAAAG

>TRINITY_DN123269_c11_g3_i1 from sample A1 / Example unspliced isoform:

CCTTAGCCAACGAAAATCAAAACCCTTCATCTGCTTGCGACCTTTAAACTACTTCAACCCTCTTCCAACAAGCATTGTTTATTTAACCATTCCAACCTGCACAATTTCTATGGATAGCAGCCCTCATCGTTTTGAATTTTGGGTAGAAAAGGGGTGCGAAAGATTTATTATTCCACTCTGGGCAGAGGGCAGGAGTGCGC
GACGGTCAGTCTTTTCTCTCCGCCCTCAAGCTCGATCATTCATTAGTTCATTCTGTACTCCAAATTGAATTAACGATGGTGGTTGCTCCGGCTGGCAATTCTTTTAACAAGGAAGTAGCCATCAGAAGAAGAATAACCAACATATACAATAAAAGAGAGGAAGACTTCCCGTCACTTCGAGATTACAATGACTATTTAGA
GGAGGTTGAGGACATGAgcaaacttcaaacccatattcatgtgtgcagCATATAAGCTGGTGGAAGGAATAGATGTTCCAGCAATTGAAGCAAATATTGCAAAGTATCAGGAAGAAAATGCGGAACAGATAATAAATTCTCGGGCCCGCAAGGCTGAAGAACTAGCGAAATCTCTGAGGGAACATCAAACACAAGCTGCA
ACAGAGGGTCCTTCTGATATGGTTCCAGACCAGAATTCTCAGGCAGTTGGAGCAACTGGAGGTGGACAATATGCTCCTTCCATTGCAGCACCTATGTTCATGCAGCCAAGACCAACAGGACCTACCGCACAACCAGTGCCTATTGGTGGGGGTAATGCAAGCAGCATGCCAGAGGATGAAGAAACACAAAAGCAGCGTGC
AGAAAGAGCAGCAAGGGCAGGAGGGTGGACTCCTGAAATGTGTAGAAAGAGGGCATTTGAAGAAGCTTTTGGTAGCTTGTGGATCTTTTAGTTCTTGTGTTTTTTTGACCATGCAATATTTTTAGAGGCAGCGTGCAAGCCAGTTGCTAAGGATGTTATTGTACCTCCAAAGAATTAAGTCTTAAAATTGATAAACAAAG
AAATTGGGGTTTTCAAGCATGAGGGGAGAAGCAGCATTTTTTAGTTCCTGTATTCATGTAAGTGTTTTGAAATCTGCAATCAGGCACTTAATTCCGTGGAGGGTAATTTTCAGAGAGGATATTCTATCCCTCCATGCTTAGGTTGCGGGAGGAGCCTCTTTTGTAACCCTTTTGTAACCTTTTTTTGTGAATGACCTTTT
TATTTGTAATTTTGTAGTAAGCTTTTGAAATAAATTGTCTTTGGAGTTTATTGTTTTGAGTGGACAGACCACCCATCATCCAGGGATACAAATGAAAGCGCGAGATATAAGAGTTGGATTTTGGAATACATAAATTTGAAAGGAGGCTTTGGAATACGTAGATCATTTGTGAGAGTTACAAGAGTTAGCCTTTGGAATAC
CTAGATTTGAAAGGAGGCTTCTGAATACGTAGATTAGAAGGGTGGGTGTTAGAAAATAATACTAATTTATTTATTTATTTAATAAAGAGGGAAGTGAGTCAACAAATATATAATAATAAAATTCATAGAAAATAATACTAATTTATTTAATAAAGAGGGGAGTGAGTCAACAAATATATCATAAAAGGTGGAGGGGAATT
GTGCTAAAAATAAAATAATAAAG

Intron 3 GTCAGTCTTT ... TTTTAACAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	89.97	67.3	596	612
A2	92	39.3	454	450.3
A3	94.34	39	656	642.7
A4	92.95	39	527	501.7
A5	90.74	29.3	318	255.7
A6	92.81	93	1226	1175
A7	93.16	195.3	2817	2497.3
A8	92.16	168.3	1994	1965.3
A9	93.04	191.7	2660	2447.3
A10	93.38	155.7	2392	1992.3

>TRINITY_DN112413_c0_g1_i3 from sample A2 / Example spliced isoform

TTCATAACCCTTAGCCAACGAAATTCATAACCCTTAGCCAACGAAATTCATAACCCTTAGCCAACGAAAATCAAAACCCTTCATCTGCTTGCGACCTTTAAACTACTTCAACCCTCTTCCAACAAGCATTGTTTATTTAACCATTCCAACCTGCACAATTTCTATGGATAGCAGCCCTCATCGTTTTGAATTTTGGGTAG
AAAAGGGGTGCGAAAGATTTATTATTCCACTCTGGGCAGAGGGCAGGAGTGTGCGACGGAAGTAGCCATCAGAAGAAGAATAACCAACATATACAATAAAAGAGAGGAAGACTTCCCGTCACTTCGAGATTACAATGACTATTTAGAGGAGGTTGAGGACATGACATATAAGCTGGTGGAAGGAATAGATGTTCCAGCAA
TTGAAGCAAATATTGCAAAGTATCAGGAAGAAAATGCGGAACAGATAATAAATTCTCGGGCCCGCAAGGCTGAAGAACTAGCGAAATCTCTGAGGGAACATCAAACACAAGCTGCAACAGAGGGTCCTTCTGATATGGTTCCAGACCAGAATTCTCAGGCAGTTGGAGCAACTGGAGGTGGACAATATGCTCCTTCCATT
GCAGCACCTATGTTCATGCAGCCAAGACCAACAGGACCTACCGCACAACCAGTGCCTATTGGTGGGGGTAATGCAAGCAGCATGCCAGAGGATGAAGAAACACAAAAGCAGCGTGCAGAAAGAGCAGCAAGGGCAGGAGGGTGGACTCCTGAAATGTGTAGAAAGAGGGCATTTGAAGAAGCTTTTGGTAGCTTGTGGAT
CTTTTAGTTCTTGAGTTTTTTTGACCATGCAATATTTTTAGAGGCAGCGTGCAAGCCAGTTGCTAAGGATGTTATTGTACCTCCAAAGAATTAAGTCTTAAAATTGATAAACAAAGAAATTGGGGTTTTCAAGCATGAGGGGAGAAGCAGCATTTTTTAGTTCCTGTATTCATGTAAGTGTTTTGAAATCTGCAATCAGG
CACTTAATTCCGTGGAGGGTAATTTTCAGAGAGGATATTCTATCCCTCCATGCTTAGGTAGCGGGAGGAGCCTCTTTTGTAACCCTTTTGTAACCTTTTTTTGTGAATGACCTTTTTATTTGTAATTTTGTAGTAAGCTTTTGAAATAAATTGTCTTTGGAGTTTATTGTTTTGAGTGGACAGACCACCCATCATCCAGG
GATACAAATGAAAGCGCGAGATATAAGAGTTGGATTTTGGAATACATAAATTTGAAAGGAGGCTTTGGAATACGTAGATCATTT

>TRINITY_DN112413_c0_g1_i2 from sample A2 / Example unspliced isoform:

TTCATAACCCTTAGCCAACGAAATTCATAACCCTTAGCCAACGAAATTCATAACCCTTAGCCAACGAAAATCAAAACCCTTCATCTGCTTGCGACCTTTAAACTACTTCAACCCTCTTCCAACAAGCATTGTTTATTTAACCATTCCAACCTGCACAATTTCTATGGATAGCAGCCCTCATCGTTTTGAATTTTGGGTAG
AAAAGGGGTGCGAAAGATTTATTATTCCACTCTGGGCAGAGGGCAGGAGTGTGCGACGgtcagtcttttctctccgccctcaagctcgatcattcattagttcattctgtactccaaattgaattaacgatggtggttgctccggctggcaattcttttaacaagGAAGTAGCCATCAGAAGAAGAATAACCAACATATA
CAATAAAAGAGAGGAAGACTTCCCGTCACTTCGAGATTACAATGACTATTTAGAGGAGGTTGAGGACATGAGCAAACTTCAAACCCATATTCATGTGTGCAGCATATAAGCTGGTGGAAGGAATAGATGTTCCAGCAATTGAAGCAAATATTGCAAAGTATCAGGAAGAAAATGCGGAACAGATAATAAATTCTCGGGCC
CGCAAGGCTGAAGAACTAGCGAAATCTCTGAGGGAACATCAAACACAAGCTGCAACAGAGGGTCCTTCTGATATGGTTCCAGACCAGAATTCTCAAGCAGTTGGAGCAACTGGAGGTGGACAATATGCTCCTTCCATTGCAGCACCTATGTTCATGCAGCCAAGACCAACAGGACCTACCGCACAACCAGTGCCTATTGG
TGGGGGTAATGCAAGCAGCATGCCAGAGGATGAAGAAACACAAAAGCAGCGTGCAGAAAGAGCAGCAAGGGCAGGAGGGTGGACTCCTGAAATGTGTAGAAAGAGGGCATTTGAAGAAGCTTTTGGTAGCTTGTGGATCTTTTAGTTCTTGAGTTTTTTTGACCATGCAATATTTTTAGAGGCAGCGTGCAAGCCAGTTG
CTAAGGATGTTATTGTACCTCCAAAGAATTAAGTCTTAAAATTGATAAACAAAGAAATTGGGGTTTTCAAGCATGAGGGGAGAAGCAGCATTTTTTAGTTCCTGTATTCATGTAAGTGTTTTGAAATCTGCAATCAGGCACTTAATTCCGTGGAGGGTAATTTTCAGAGAGGATATTCTATCCCTCCATGCTTAGGTAGC
GGGAGGAGCCTCTTTTGTAACCCTTTTGTAACCTTTTTTTGTGAATGACCTTTTTATTTGTAATTTTGTAGTAAGCTTTTGAAATAAATTGTCTTTGGAGTTTATTGTTTTGAGTGGACAGACCACCCATCATCCAGGGATACAAATGAAAGCGCGAGATATAAGAGTTGGATTTTGGAATACATAAATTTGAAAGGAGG
CTTTGGAATACGTAGATCATTT

Intron 4 GTAAGTTATG ... TTCTTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	21.91	253	0	71
A2	23.19	202	1	61
A3	23.38	213	0	65
A4	19.59	156	1	38
A5	16.83	84	2	17
A6	22.88	428	0	127
A7	21.93	904	0	254
A8	20.75	848	0	222
A9	19.23	987	0	235
A10	22.31	860	0	247

>TRINITY_DN95949_c0_g1_i4 from sample A4 / Example spliced isoform

AACGAAATTCATAACCCTTAGCCAACGAAAATCAAAACCCTTCATCTGCTTGCGACCTTTAAACTACTTCAACCCTCTTCCAACAAGCATTGTTTATTTAACCATTCCAACCTGCACAATTTCTATGGATAGCAGCCCTCATCGTTTTGAATTTTGGGTAGAAAAGGGGTGCGAAAGATTTATTATTCCACTCTGGGCAG
AGGGCAGGAGTGTGCGACGGTCAGTCTTTTCTCTCCGCCCTCAAGCTCGATCATTCATTAGTTCATTCTGTACTCCAAATTGAATTAACGATGGTGGTTGCTCCGGCTGGCAATTCTTTTAACAAGGAAGTAGCCATCAGAAGAAGAATAACCAACATATACAATAAAAGAGAGGAAGACTTCCCGTCACTTCGAGATTA
CAATGACTATTTAGAGGAGGTTGAGGACATGAGCAAACTTCAAACCCATATTCATGTGTGCAGCATATAAGCTGGTGGAAGGAATAGATGTTCCAGCAATTGAAGCAAATATTGCAAAGTATCAGGAAGAAAATGCGGAACAGATAATAAATTCTCGGGCCCGCAAGGCTGAAGAACTAGCGAAATCTCTGAGGGAACAT
CAAACACAAGCTGCAACAGAGGGTCCTTCTGATATGGTTCCAGACCAGAATTCTCAGGCAGTTGGAGCAACTGGAGGTGGACAATATGCTCCTTCCATTGCAGCACCTATGTTCATGCAGCCAAGACCAACAGGACCTACCGCACAACCAGTGCCTATTGGTGGGGGTAATGCAAGCAGCATGCCAGAGGATGAAGAAAC
ACAAAAGCAGCGTGCAGAAAGAGCAGCAAGGGCAGGAGGGTGGACTCCTGAAATGTGTAGAAAGAGGGCATTTGAAGAAGCTTTTGGTAGCTTGTGGATCTTTTAGTTCTTGTGTTTTTTTGACCATGCAATATTTTTAGAGGCAGCGTGCAAGCCAGTTGCTAAGGATGTTATTGTACCTCCAAAGAATTAAGTCTTAA
AATTGATAAACAAAGAAATTGGGATTTTCAAGCATCAGGGGAGAAGCAGCATTTTTTAGTTCCTGTATTCATGTAAGTGTTTTGAAATCTGCAATCAGGCACTTAATTCCGTGGAGGGTAATTTTCAGAGAGGATATTCTATCCCTCCATGCTTAGGTAGCGGGAGGAGCCTCTTTTGTAACCCTTTTGTAACCTTTTTT
TGTGAATGACCTTTTTATTTGTAATTTTGTAGTAAGCTTTTGAAATAAATTGTCT

>TRINITY_DN95949_c0_g1_i3 from sample A4 / Example unspliced isoform:

GTTGAGGACATGAgtaagttatgttccttcattgtttaattatttcatgcagaaggcataccgatatatgtaaagtgcaaaatgagcgctttgcagattttatgtatatcattcatctctttgcttacttttggatggtcacctctcttttcttctgtattcatattttgggatttggtccagtgtctggtttttttaat
tcatttttcttatttgggcaattgcagtaaactcacagaaatattaaaggcattgcaacttttagtgcatttgtttgatgaacatagtagcaatatgatagctatgaaatatcggctttcagcaccattcttgtgttcgcatatcttcaagagccctagcatctgtgctgcaaattttctttaagcatgatgtaattatt
tcttttcagGCAAACTTCAAACCCATATTCATGTGTGCAGCATATAAGCTGGTGGAAGGAATAGATGTTCCAGCAATTGAAGCAAATATTGCAAAGTATCAGGAAGAAAATGCGGAACAGATAATAAATTCTCGGGCCCGCAAGGCTGAAGAACTAGCGAAATCTCTGAGGGAACATCAAACACAAGCTGCAACAGAGGG
TCCTTCTGATATGGTTCCAGACCAGAATTCTCAGGCAGTTGGAGCAACTGGAGGTGGACAATATGCTCCTTCCATTGCAGCACCTATGTTCATGCAGCCAAGACCAACAGGACCTACCGCACAACCAGTGCCTATTGGTGGGGGTAATGCAAGCAGCATGCCAGAGGATGAAGAAACACAAAAGCAGCGTGCAGAAAGAG
CAGCAAGGGCAGGAGGGTGGACTCCTGAAATGTGTAGAAAGAGGGCATTTGAAGAAGCTTTTGGTAGCTTGTGGATCTTTTAGTTCTTGTGTTTTTTTGACCATGCAATATTTTTAGAGGCAGCGTGCAAGCCAGTTGCTAAGGATGTTATTGTACCTCCAAAGAATTAAGTCTTAAAATTGATAAACAAAGAAATTGGG
ATTTTCAAGCATCAGGGGAGAAGCAGCATTTTTTAGTTCCTGTATTCATGTAAGTGTTTTGAAATCTGCAATCAGGCACTTAATTCCGTGGAGGGTAATTTTCAGAGAGGATATTCTATCCCTCCATGCTTAGGTAGCGGGAGGAGCCTCTTTTGTAACCCTTTTGTAACCTTTTTTTGTGAATGACCTTTTTATTTGTA
ATTTTGTAGTAAGCTTTTGAAATAAATTGTCT