sp|Q8GYA6|PS13B_ARATH ----> 26S proteasome non-ATPase regulatory subunit 13 homolog B
Intron 1 GTAAATATTT ... TATACTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.45 | 103 | 28 | 4 |
| A2 | 9.09 | 90 | 14 | 4 |
| A3 | 15.24 | 114 | 23 | 18 |
| A4 | 13.66 | 98 | 22 | 9 |
| A5 | 12.06 | 62 | 9 | 8 |
| A6 | 13.71 | 107 | 22 | 12 |
| A7 | 13.38 | 191 | 39 | 20 |
| A8 | 15.09 | 90 | 18 | 14 |
| A9 | 12.22 | 158 | 34 | 10 |
| A10 | 13.98 | 163 | 45 | 8 |
>TRINITY_DN41099_c1_g2_i1 from sample A8 / Example spliced isoformGGACATTGGTATGCGCGCAAGTCCTTAGTTATACCCTCGACCTAAAATCAAACAAACCTGCCTTTATACTCGCCCCTCGCCTCCCTGAGGTCACCCACGCCGGCTTTTGGGATTTTTGGGGTTCTTGAAGTAACTCTGTTCTATTATACTTGGTTTTGTCTGCCTCGCTCGAAAGCAGGCAACGTATTTTATCAAGCAGG
AGGTGATTCCAACTGAGACTTGAGGCTTGGACGAGGAGCTTTTACTCCATCTCAAGAGATGGCAGCATTTGTGGAGACTTCGGATGAGGATGCTACTCTTGCTGTGGCTCGGTTCACTGCAGACTTGGCGTGGGCTAATGCAGGGCCTGAAGTTGCAGAAACTCAAGTGATACACTACGTTGAGGAGGCCCAAGCCTATA
TGGTGGAAGGAAGATGGTCAAATTTGGTATCGCTTTTACTTACTTCAGCTGACCTCATTTTTGCAAACTCAGCAGAGAAAGATCTTGAGTGTATTTTCACTGTCATCTGTAACCTGGTAACAAAAGCGGGAGGCCCAGATGAAGCTCTGGCCATGGCAGATCAGATAGTAACAAAAGTCACTCAGCAACCCAGTGACAAA
CCTGCTTTGCGCTTGAGAGTACTCTTCAATTTGTACAACGTGCTTGAGAATCCATATAGCAAATTCTTGGTTTACAAGAGAGCTCTTAAGCTGGCAGCTAATGGGAAAGTTGCAGATCTCATCATTCCTTCTTTCAAAAAGATGGATACATTCTTGAAAGAATGGAACATTGCGAAGAATGATCAGCGTGAACTTTTTCT
GGCTATTTCAAACATCTTGAAAGAAAATAAAGGTTCAGCAAAGGATTCTTATTCCTTTCTTCTGAAGTACTTGGCAACCTTTAATGGTGAGGATGCTTACACAATAAGTGAAGCAAAAGAAGAAGCTGTGAGGGCCATTATAGAATTTGTTAAAGCACCAGATATGTTCCAGTGTGACTTACTAGATAAGCCTGCTGTGG
CACAACTGGAAAGAGATGGAAAGTATTCATTGGTATACCGCTTGTTACAGATTTTCCTCACTCAGCGATTAGATTCTTATTTGGAGTTTCAAGCTGCAAATTCTGCATTATTGAAAAGCTATGGTATAATCCATGAAGATTGCATAACAAAAATGCGGTTAATGTCTCTTGCTGATCTTGCTTCAAAAGGATCTGGAGAA
ATTTCTTATGCTTCTGTGAGGGATACATTGCGGGTTACAGATGATGAGGTGGAATTTTGGATTGTTCGAGCAATTAGTGCAAAAATGTTAGATTGTAAGATGGATCAGATGCGCCAAGTAGCAGTTGTAAACCGGTCTACAGAACGAATATTTGGACCACATCAGTGGAAAGAACTACGCTCAAGACTATCACTTTGGAA
GGAGAATGTTGCAAGGCTTTCAAGAAATATCCAGAAGGCAAATACTGCTGCTGATCTGGCACCTGAGGCATTACAAGGGGTGGCAGTCCAATAAGCATTTATTTTGCATTTTGCTAGAATTTTGGCGGACAAACTTCTTTTGGGGTTTTCTAGGGTTCAGTGAAAGAGGTGACTTAACATTCATGAGCAGCAGGAGGATT
GGGCAGCAATACATTGAGGTTTCTTATGTCAAAATTATTGTTTTACGGGCTCATAGCTGAGGCTAATGATAAGATGGTTTTATTTTGTCCATGGCATTTAGTTAATGGTTTATCAGACAGTTATCTTAAACTGTCTGTGATTCAGCATGTAATCCCGACTGTTAAGATTATTGGGATGTTATTTAAAATTTTGTGAGACC
AAATTGATTCCAACTGAAATAGAATGATGCCTTTCAACGAGGCATCATATGTGGCCGTAAACATCAAATATTTTTACACGTTTCATTATTTCTTCCCTTTCATTTAATTCTAGCCTTCAATTTTTTTTTGTGAAACTTTTGTATTAATTATGTAGCCTTTTGTATGCCCTTGAGTCAATTTCTCTTAGGCTCATGGGTGG
CTGGAGTTTGTCTGGTCATCTAACTTCATTTTAATTTTTCACTTCTATACAAATTTTCAG
>TRINITY_DN41099_c1_g2_i2 from sample A8 / Example unspliced isoform:GGACATTGGTATGCGCGCAAGTCCTTAGTTATACCCTCGACCTAAAATCAAACAAACCTGCCTTTATACTCGCCCCTCGCCTCCCTGAGGTCACCCACGCCGGCTTTTGGGATTTTTGGGGTTCTTGAAGTAACTCTGTTCTATTATACTTGGTTTTGTCTGCCTCGCTCGAAAGCAGGCAACGTATTTTATCAAGCAGG
AGGTGATTCCAACTGAGACTTGAGGCTTGGACGAGGAGCTTTTACTCCATCTCAAGAGATGGCAGCATTTGTGGAGACTTCGGATGAGGATGCTACTCTTGCTGTGGCTCGGTTCACTGCAGACTTGGCGTGGGCTAATGCAGGGCCTGAAGTTGCAGAAACTCAAGTGATACACTACGTTGAGGAGGCCCAAGCCTATA
TGGTGGAAGGAAGATGGTCAAATTTGGTATCGCTTTTACTTACTTCAGCTGACCTCATTTTTGCAAACTCAGCAGAGAAAGATCTTGAGTGTATTTTCACTGTCATCTGTAACCTGGTAACAAAAGCGGGAGGCCCAGATGAAGCTCTGGCCATGGCAGATCAGATAGTAACAAAAGTCACTCAGCAACCCAGTGACAAA
CCTGCTTTGCGCTTGAGAGTgtaaatattttttatttcctttttagaggtactaattactgattcaagttcccaggaatttgagaatgactttgttttctgtttatacttcagACTCTTCAATTTGTACAACGTGCTTGAGAATCCATATAGCAAATTCTTGGTTTACAAGAGAGCTCTTAAGCTGGCAGCTAATGGGAA
AGTTGCAGATCTCATCATTCCTTCTTTCAAAAAGATGGATACATTCTTGAAAGAATGGAACATTGCGAAGAATGATCAGCGTGAACTTTTTCTGGCTATTTCAAACATCTTGAAAGAAAATAAAGGTTCAGCAAAGGATTCTTATTCCTTTCTTCTGAAGTACTTGGCAACCTTTAATGGTGAGGATGCTTACACAATAA
GTGAAGCAAAAGAAGAAGCTGTGAGGGCCATTATAGAATTTGTTAAAGCACCAGATATGTTCCAGTGTGACTTACTAGATAAGCCTGCTGTGGCACAACTGGAAAGAGATGGAAAGTATTCATTGGTATACCGCTTGTTACAGATTTTCCTCACTCAGCGATTAGATTCTTATTTGGAGTTTCAAGCTGCAAATTCTGCA
TTATTGAAAAGCTATGGTATAATCCATGAAGATTGCATAACAAAAATGCGGTTAATGTCTCTTGCTGATCTTGCTTCAAAAGGATCTGGAGAAATTTCTTATGCTTCTGTGAGGGATACATTGCGGGTTACAGATGATGAGGTGGAATTTTGGATTGTTCGAGCAATTAGTGCAAAAATGTTAGATTGTAAGATGGATCA
GATGCGCCAAGTAGCAGTTGTAAACCGGTCTACAGAACGAATATTTGGACCACATCAGTGGAAAGAACTACGCTCAAGACTATCACTTTGGAAGGAGAATGTTGCAAGGCTTTCAAGAAATATCCAGAAGGCAAATACTGCTGCTGATCTGGCACCTGAGGCATTACAAGGGGTGGCAGTCCAATAAGCATTTATTTTGC
ATTTTGCTAGAATTTTGGCGGACAAACTTCTTTTGGGGTTTTCTAGGGTTCAGTGAAAGAGGTGACTTAACATTCATGAGCAGCAGGAGGATTGGGCAGCAATACATTGAGGTTTCTTATGTCAAAATTATTGTTTTACGGGCTCATAGCTGAGGCTAATGATAAGATGGTTTTATTTTGTCCATGGCATTTAGTTAATG
GTTTATCAGACAGTTATCTTAAACTGTCTGTGATTCAGCATGTAATCCCGACTGTTAAGATTATTGGGATGTTATTTAAAATTTTGTGAGACCAAATTGATTCCAACTGAAATAGAATGATGCCTTTCAACGAGGCATCATATGTGGCCGTAAACATCAAATATTTTTACACGTTTCATTATTTCTTCCCTTTCATTTAA
TTCTAGCCTTCAATTTTTTTTTGTGAAACTTTTGTATTAATTATGTAGCCTTTTGTATGCCCTTGAGTCAATTTCTCTTAGGCTCATGGGTGGCTGGAGTTTGTCTGGTCATCTAACTTCATTTTAATTTTTCACTTCTATACAAATTTTCAG
Intron 2 GTAAGTAACA ... TATCTTTAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.53 | 39 | 12 | 12 |
| A2 | 12.82 | 68 | 3 | 10 |
| A3 | 20 | 44 | 1 | 11 |
| A4 | 10.26 | 35 | 0 | 4 |
| A5 | 19.35 | 25 | 1 | 6 |
| A6 | 11.49 | 77 | 0 | 10 |
| A7 | 20.45 | 70 | 0 | 18 |
| A8 | 13.51 | 32 | 0 | 5 |
| A9 | 8.54 | 75 | 1 | 7 |
| A10 | 13.21 | 46 | 0 | 7 |
>TRINITY_DN118444_c3_g3_i1 from sample A1 / Example spliced isoformCAGGATTTCATACTATATTTAAAGAAAGGACATTGGTATGCGCGCAAGTCCTTAGTTATACCCTCGACCTAAAATCAAACAAACCTGCCTTTATACTCGCCCCTCGCCTCCCTGAGGTCACCCACGCCGGCTTTTGGGATTTTTGGGGTTCTTGAAGTAACTCTGTTCTATTATACTTGGTTTTGTCTGCCTCGCTCGAA
AGCAGGCAACGTATTTTATCAAGCAGGAGGTGATTCCAACTGAGACTTGAGGCTTGGACGAGGAGCTTTTACTCCATCTCAAGAGATGGCAGCATTTGTGGAGACTTCGGATGAGGATGCTACTCTTGCTGTGGCTCGGTTCACTGCAGACTTGGCGTGGGCTAATGCAGGGCCTGAAGTTGCAGAAACTCAAGTGATAC
ACTACGTTGAGGAGGCCCAAGCCTATATGGTGGAAGGAAGATGGTCAAATTTGGTATCGCTTTTACTTACTTCAGCTGACCTCATTTTTGCAAACTCAGCAGAGAAAGATCTTGAGTGTATTTTCACTGTCATCTGTAACCTGGTAACAAAAGCGGGAGGCCCAGATGAAGCTCTGGCCATGGCAGATCAGATAGTAACA
AAAGTCACTCAGCAACCCAGTGACAAACCTGCTTTGCGCTTGAGAGTACTCTTCAATTTGTACAACGTGCTTGAGAATCCATATAGCAAATTCTTGGTTTACAAGAGAGCTCTTAAGCTGGCAGCTAATGGGAAAGTTGCAGATCTCATCATTCCTTCTTTCAAAAAGATGGATACATTCTTGAAAGAATGGAACATTGC
GAAGAATGATCAGCGTGAACTTTTTCTGGCTATTTCAAACATCTTGAAAGAAAATAAAGGTTCAGCAAAGGATTCTTATTCCTTTCTTCTGAAGTACTTGGCAACCTTTAATGGTGAGGATGCTTACACAATAAGTGAAGCAAAAGAAGAAGCTGTGAGGGCCATTATAGAATTTGTTAAAGCACCAGATATGTTCCAGT
GTGACTTACTAGATAAGCCTGCTGTGGCACAACTGGAAAGAGATGGAAAGTATTCATTGGTATACCGCTTGTTACAGATTTTCCTCACTCAGCGATTAGATTCTTATTTGGAGTTTCAAGCTGCAAATTCTGCATTATTGAAAAGCTATGGTATAATCCATGAAGATTGCATAACAAAAATGCGGTTAATGTCTCTTGCT
GATCTTGCTTCAAAAGGATCTGGAGAAATTTCTTATGCTTCTGTGAGGGATACATTGCGGGTTACAGATGATGAGGTGGAATTTTGGATTGTTCGAGCAATTAGTGCAAAAATGTTAGATTGTAAGATGGATCAGATGCGCCAAGTAGCAGTTGTAAACCGGTCTACAGAACGAATATTTGGACCACATCAGTGGAAAGA
ACTACGCTCAAGACTATCACTTTGGAAGGAGAATGTTGCAAGGCTTTCAAGAAATATCCAGAAGGCAAATACTGCTGCTGATCTGGCACCTGAGGCATTACAAGGGGTGGCAGTCCAATAAGCATTTATTTTGCATTTTGCTAGAATTTTGGCGGACAAACTTCTTTTGGGGTTTTCTAGGGTTCAGTGAAAGAGGTGAC
TTAACATTCATGAGCAGCAGGAGGATTGGGCAGCAATACATTGAGGTTTCTTATGTCAAAATTATTGTTTTACGGGCTCATAGCTGAGGCTAATGATAAGATGGTTTTATTTTGTCCATGGCATTTAGTTAATGGTTTATCAGACAGTTATCTTAAACTGTCTGTGATTCAGCATGTAATCCCGACTGTTAAGATTATTG
GGATGTTATTTAAAATTTTGTGAGACCAAATTGATTCCAACTGAAATAGAATGATGCCTTTCAACGAGGCATCATATGTGGCCGTAAACATCAAATATTTTTACACGTTTCATTATTTCTTCCCTTTCATTTAATTCTAGCCTTCAATTTTTTTTTGTGAAACTTTTGTATTAATTATG
>TRINITY_DN118444_c3_g3_i2 from sample A1 / Example unspliced isoform:CAGATGATTTTTTTTCTTGAATGATTTGTTTCCCTAGATTGTAGATTCCGTAAGGGGGAGAAAATAACCAACTATCGAAGAGTTGTGAACTAATCTAAATAGCTAACCTTCTTAGTCTGACTAGATGCTAGAAAAGGAGTATTGGTAGTTTTATTTTCTGGGCTAATGCTTTGTTTCCATCCGATGTTGGTGTGGGTTTG
TCATATTTAGGTTGGTTGTGTAGGATGGCAGCATTTGTGGAGACTTCGGATGAGGATGCTACTCTTGCTGTGGCTCGGTTCACTGCAGACTTGGCGTGGGCTAATGCAGGGCCTGAAgtaagtaacaattctttgcatcccctaaatgttgtttcgatgatgaccaatgttacatgggtgggataagtatctttaagGTT
GCAGAAACTCAAGTGATACACTACGTTGAGGAGGCCCAAGCCTATATGGTGGAAGGAAGATGGTCAAATTTGGTATCGCTTTTACTTACTTCAGCTGACCTCATTTTTGCAAACTCAGCAGAGAAAGGTCTGTAAAACAAAAATTTCAATTTAAAATGGTTCTCTCACATTTCTCTAGCAGAGATTTATTCACTTGAACT
TGAATCTCTAATTTGTTATTAACCATTACAAACTTCTATGTTTTATAAACTGTTGAATATGATTATATGAACTACATGGCTTCTCAGTAGCAAATTTAGTACTTTAATCATGGGTGCTTTATCAACGGTTCTGACTTGTTCCCTTTTTTTTTAAAAAGCCCGGTTAGTTTATTAAATTCAAAGTTACCAGAA