sp|Q9LZD3|E70A1_ARATH ----> Exocyst complex component EXO70A1
Intron 1 GTCAAAACAG ... CTCCCATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 55.04 | 96 | 134 | 101 |
| A2 | 53.72 | 87 | 107 | 95 |
| A3 | 59.78 | 73 | 135 | 82 |
| A4 | 60.37 | 43 | 76 | 55 |
| A5 | 57.69 | 22 | 38 | 22 |
| A6 | 45.68 | 22 | 19 | 18 |
| A7 | 55.47 | 59 | 99 | 48 |
| A8 | 62 | 19 | 35 | 27 |
| A9 | 61.18 | 59 | 118 | 68 |
| A10 | 57.49 | 61 | 110 | 55 |
>TRINITY_DN118342_c0_g1_i10 from sample A2 / Example spliced isoformCTCCCCTTGAAGACCAGTGAATTTGAACTTCCAAATCCACCAAACTACAATGTCTTGCGTGTTACCCTACATGTCCATACCACCATGCATTGAAAACAACCTCATTGTCTCTTTACCAACTTCAATACGTGCATCTTTCTAAGTTTGAACGCGCATAACATCAAGACCGCTATCAAGAAGCTGGCGAGCCACAGCAATTT
CTATATACAACTCGTCATCACACGCCATAATTCAGGACATCAGAGTACATAAAAAGGTTTGGAAGGCCAGCATTCAGTGATTCATCCATAGGCATAACTGAATTGTATTCTTATAATGGAGGTGGAGATGGAGAGCGCTAAAAAATTGAAGGAAAGCTTGCTGAAGAGCCAGACTGTAACAGACGCCATGCTCACCGTTT
TGGTTTCCTTTGATCGGCGCCTCTCATCATTGGACTCTGCAATGCGCCCCACACAGGTAGAGGCACAGATAATGAAAGGACCCCATGTTGATTTGAATGGCTTTCTTATGGCAGTGGAGAAGTTACAAAAAACACTTGATTTTTTCACAAGTGCTGGCAAGTTGAAGAGCACAGAAAGCACCATATATGATACTCGTGAA
CTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGAGAAATCAGGTCATCCAGTCT
>TRINITY_DN118342_c0_g1_i2 from sample A2 / Example unspliced isoform:CTCCCCTTGAAGACCAGTGAATTTGAACTTCCAAATCCACCAAACTACAATGTCTTGCGTGTTACCCTACATGTCCATACCACCATGCATTGAAAACAACCTCATTGTCTCTTTACCAACTTCAATACGTGCATCTTTCTAAGTTTGAACGCGCATAACATCAAGACCGCTATCAAGAAGCTGGCGAGCCACAGCAATTT
CTATATACAACTCGTCATCACACGCCATAATTCAGGACATCAGAGTACATAAAAAGGTTTGGAAGGCCAGCATTCAGTGATTCATCCATAGGCATAACTGAATTGTATTCTTATAATGGAGGTGGAGATGGAGAGCGCTAAAAAATTGAAGGAAAGCTTGCTGAAGAGCCAGACTGTAACAGACGCCATGCTCACCGTTT
TGGTTTCCTTTGATCGGCGCCTCTCATCATTGGACTCTGCAATGCGCCCCACACAGgtcaaaacagatgagattagaaaagctcatgagaatattgaaaagacactcaaagcagcagaggcagttttgacacactatgatatctcccatcagGTAGAGGCACAGATAATGAAAGGACCCCATGTTGATTTGAATGGCTTT
CTTATGGCAGTGGAGAAGTTACAAAAAACACTTGATTTTTTCACAAGTGCTGGCAAGTTGAAGAGCACAGAAAGCACCATATATGATACTCGTGAACTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAGTTTTTGAGCCTGAACAGTTGATTGTTATTTTGCCGAC
TACAAAGGCACATTCCACAGTTGCTCGAAAGAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCATCTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGTTGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATTGCATTGTGCATGGTCAATGGAGGGCATTACCAACAAT
GTACAAAAATCTACAGAGAAATCAGGTCATCCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTTGAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCATGTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGATATTATATACAGCAGAGCAAATGCTATGCAATCAGTTG
TTTTACGAGCTTGATCCTCACGGGGAATGCTGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACTGCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAGAAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTACCAGAGGTTCAGGCATTATTTGGAGCAAAAGCATCTGC
AGAATGTCTGTCTAGTTTTAAAGAATTAATGAAGAGGTTGAGTCAGACAGCATGCAATACACTGGATGAATTTGGAGAAGCGGTGGAAAAGGATGCCACTAAGGCAGCAATCCATGATGGCACCGTTCATCCTCTGACCAGCTATGTTATAAACTATGTGAAGTTTTTGTTTGGTTATAAGACTACATTAGAACACTTGT
TTGAGGATGAAAAAAAGGATGATCTATCATCAAAAATCTGCCACATAGTGTCCATACTTCTAACTAATCTAGAAGGCAAATCAAAGCAGTACAAAGACCCTGCGTTGATGCATCTGTTTCTAATGAACAACATCCACTATATAGTTAAATCTGTTAGAAAATCTGAAGCAAGGAACTTGTTAGGTGAAGACTGGGTCCAG
AGGCATCGCCGCTTAGTTCAGCAGCATGCCAGTGGTTACCAACGTACTTCCTGGAGCAAGGTGCTACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGAAATGTTGGGATTGCAGAGAGTAGCACTGTTTCAAGGTCTCTTTTAAAAGAAAGATTTAAAATTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACA
AACACAGTGGATAGTTCCAGATGTGGAACTTCGGGAATCACTAAGACTAGCAGTTGCAGAAGTGTTATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGGTGCACCAATACAAAGTGGGAGGAATCCTAATAAGTACATCAAATACATGCCTGAAGATTTGGAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCA
AGGGTGACCAAAAGCGATAATATTTTAATCTATACCTCGTTTTCAAGCATATTTTATTTGAGCGTATTTCCAAGGTAAAGAGGCTATTTCAAGTTTCAGAGATTTTTGGGGTAAATTTCCATTTCCATTTCCACCAATTTTTCAGATTGATTGAAGGAGCTAGGTATACCTTTGAAGTGCCAATGATTTTATTGAGTTAT
GAAATGATCTAGTTGGCCTCGAGGGTAGACATTTTATCTCAAAAATTTGATTGGTG
Intron 2 GTAAGTCTTC ... CATCATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25 | 57 | 24 | 14 |
| A2 | 19.69 | 51 | 11 | 14 |
| A3 | 29.33 | 53 | 27 | 17 |
| A4 | 31.58 | 26 | 15 | 9 |
| A5 | 14.29 | 12 | 1 | 3 |
| A6 | 17.65 | 28 | 10 | 2 |
| A7 | 22.35 | 99 | 41 | 16 |
| A8 | 24.56 | 86 | 24 | 32 |
| A9 | 22.05 | 99 | 34 | 22 |
| A10 | 19.54 | 105 | 28 | 23 |
>TRINITY_DN118223_c0_g1_i4 from sample A3 / Example spliced isoformCCTACATGTCCACACCACCATGCATTGAAAACAACCTCATTGTCTATTTACCACCTTCAATACGTGCATCTTTCTAAGTTTGATCGCGCATAACATCAAGACCGCTATCAAGAAGCTGGCGAGCCACAGCAATTTCTATATACGACTCGTCATCACACGCCATAATTCAGGACATCAGAGTACATAAAAAGGTTTGGAAG
GCCAGCATTCAGTGATTCATCCATAGGCATAACTGAATTGTATTCTTATAATGGAGGTGGAGATGGAGAGCGCTAAAAAATTGAAGGAAAGCTTGCTGAAGAGCCAGACTGTAACAGACGCCATGCTCACCGTTTTGGTTTCCTTTGATCGGCGCCTCTCATCATTGGACTCTGCAATGCGCCCCACACAGGTCAAAACA
GATGAGATTAGAAAAGCTCATGAGAATATTGAAAAGACACTCAAAGCAGCAGAGGCAGTTTTGACACACTATGATATCTCCCATCAGGTAGAGGCACAGATAATGAAAGGACCCCATGTTGATTTGAATGGCTTTCTTATGGCAGTGGAGAAGTTACAAAAAACACTTGATTTTTTCACAAGTGCTGGCAAGTTGAAGAG
CACAGAAAGCACCATATATGATACTCGTGAACTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAGTTTTTGAGCCTGAACAGTTGATTGTTTTTTTGCCGACTACAAAGGGACATTCCACAGTTGCTCGAAAGAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCAT
CTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGTTGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATTGCATTGTGCATGGTCAATGGAGGGCATTACCAACAATGTACAAAAATCTACAGAGAAATCAGGTCATCCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTT
GAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCATGTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGATATTATATACAGCAGAGCAAATGCTATGCAATCAGTTGTTTTACGAGCTTGATCCTCACGGGGAATGCTGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACT
GCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAGAAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTACCAGAGGTTCAGGCATTATTTGGAGCAAAAGCATCTGCAGAATGTCTGTCTAGTTTTAAAGAATTAATGAAGAGGTTGAGTCAGACAGCATGCAATACACTGG
ATGAATTTGGAGAAGCGGTGGAAAAGGATGCCACTAAGGCAGCAATCCATGATGGCACCGTTCATCCTCTGACCAGCTATGTTATAAACTATGTGAAGTTTTTGTTTGGTTATAAGACTACATTAGAACACTTGTTTGACGATGAAAAAAAGGATGATCTATCATCAAAAATCTGCCACATAGTGTCCATACTTCTAACT
AATCTAGAAGGCAAATCAAAGCAGTACAAAGACCCTGCGTTGATGCATCTGTTTCTAATGAACAACATCCACTATATAGTTAAATCTGTTAGAAAATCTGAAGCAAGGAACTTGTTAGGTGAAGACTGGGTCCAGAGGCATCGCCGCTTAGTTCAGCAGCATGCCAGTGGTTACCAACGTACTTCCTGGAGCAAGGTGCT
ACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGAAATGTTGGGATTGCAGAGAGTAGCACTGTTTCAAGGTCTCTTTTAAAAGAAAGATTTAAAATTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACAAACACAGTGGATAGTTCCAGATGTGGAACTTCGGGAATCACTAAGACTAGCAGTTGCAGAAGTGT
TATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGGTGCACCAATACAAAGTGGGAGGAATCCTAATAAGTACATCAAATACATGCCTGAAGATTTGGAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCAAGGGTGACCAAAAGCGATAATATTTTAATCTATACCTCGTTTTCAAGCATATTTTATTTGAGCGT
ATTTCCAAGGGCACTAATAGAGAAGGATCCACATGGCACTTGAATGAAAAATGCAGATATGTGATTCGGAGAATTTCTTTCATTAATGAGACTTCTGAGCCTGTAAAGAGGAGCCTGAAGCAGCCACGTGTACCTAATAAGTGCAGGGTGTACCTTTCAACCGAGTCTACCTTAGAAAATCTTTTGTGTACGAGACTTTT
AATAAGTTTCAATTATTTCAAAAACAATTGCAAGCTCAAAGAGTCGGAGTATTGATTTTCTGTAAAAAGTCCAAATGAATGAAACTGAGAGAGATTTTGACATAACTCTGCACAAAAAGCCCAAGTGTTCAGGAATATGGTCGGTGCAATTCCTTCCAAAGAATGATGTTTGAGAAGATAACTGAATGGTGTATGCGTGA
CTAAATACATAATAAAATAGAATCAACCAATATAATTCTTTTGCTAAACTAATGAACACAGTAGATTGGAGGGGCACCGTATACATGAAAACTTCAAATATCGCCAATGAAATTAGAATTAG
>TRINITY_DN118223_c0_g1_i3 from sample A3 / Example unspliced isoform:CCTACATGTCCACACCACCATGCATTGAAAACAACCTCATTGTCTATTTACCACCTTCAATACGTGCATCTTTCTAAGTTTGATCGCGCATAACATCAAGACCGCTATCAAGAAGCTGGCGAGCCACAGCAATTTCTATATACGACTCGTCATCACACGCCATAATTCAGGACATCAGAGTACATAAAAAGGTTTGGAAG
GCCAGCATTCAGTGATTCATCCATAGGCATAACTGAATTGTATTCTTATAATGGAGGTGGAGATGGAGAGCGCTAAAAAATTGAAGGAAAGCTTGCTGAAGAGCCAGACTGTAACAGACGCCATGCTCACCGTTTTGGTTTCCTTTGATCGGCGCCTCTCATCATTGGACTCTGCAATGCGCCCCACACAGGTCAAAACA
GATGAGATTAGAAAAGCTCATGAGAATATTGAAAAGACACTCAAAGCAGCAGAGGCAGTTTTGACACACTATGATATCTCCCATCAGGTAGAGGCACAGATAATGAAAGGACCCCATGTTGATTTGAATGGCTTTCTTATGGCAGTGGAGAAGTTACAAAAAACACTTGATTTTTTCACAAGTGCTGGCAAGTTGAAGAG
CACAGAAAGCACCATATATGATACTCGTGAACTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAGTTTTTGAGCCTGAACAGTTGATTGTTTTTTTGCCGACTACAAAGGGACATTCCACAGTTGCTCGAAAGAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCAT
CTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGTTGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATTGCATTGTGCATGGTCAATGGAGGGCATTACCAACAATGTACAAAAATCTACAGAGAAATCAGGTCATCCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTT
GAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCATGTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGATATTATATACAGCAGAGCAAATGCTATGCAATCAGTTGTTTTACGAGCTTGATCCTCACGGGGAATGCTGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACT
GCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAGAAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTACCAGAGGTTCAGGCATTATTTGGAGCAAAAGCATCTGCAGAATGTCTGTCTAGTTTTAAAGAATTAATGAAGAGGTTGAGTCAGACAGCATGCAATACACTGG
ATGAATTTGGAGAAGCGGTGGAAAAGGATGCCACTAAGGCAGCAATCCATGATGGCACCGTTCATCCTCTGACCAGCTATGTTATAAACTATGTGAAGTTTTTGTTTGGgtaagtcttcgacatggtttggaatttaataagcatacaacaaatatcatagttatcaagtgaaaggacctaattatagttttccatccct
gtaaagtttaaatatatgatttggattgtaatctttgtgaacattgctgagaagtgttttctggcatttgagatggttatgaagaactcacttttcttccacgtgtttttttcatcatgcagTTATAAGACTACATTAGAACACTTGTTTGACGATGAAAAAAAGGATGATCTATCATCAAAAATCTGCCACATAGTGTC
CATACTTCTAACTAATCTAGAAGGCAAATCAAAGCAGTACAAAGACCCTGCGTTGATGCATCTGTTTCTAATGAACAACATCCACTATATAGTTAAATCTGTTAGAAAATCTGAAGCAAGGAACTTGTTAGGTGAAGACTGGGTCCAGAGGCATCGCCGCTTAGTTCAGCAGCATGCCAGTGGTTACCAACGTACTTCCT
GGAGCAAGGT
Intron 3 GTTCAGGCAT ... CTGGAGCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 78.42 | 15 | 71 | 38 |
| A2 | 62.32 | 26 | 49 | 37 |
| A3 | 58.52 | 28 | 49 | 30 |
| A4 | 63.36 | 24 | 33 | 50 |
| A5 | 77.78 | 3 | 18 | 3 |
| A6 | 52 | 24 | 22 | 30 |
| A7 | 49.77 | 107 | 100 | 112 |
| A8 | 53.75 | 74 | 64 | 108 |
| A9 | 55.91 | 84 | 99 | 114 |
| A10 | 58.4 | 52 | 73 | 73 |
>TRINITY_DN45052_c3_g1_i8 from sample A8 / Example spliced isoformGAGGGAAATGACTTGATAGAGTCTGCTGAGGTAACCCACAAGTCAAATTCAGGGGATGCACTGGATGGGCATAAATCTGAAGAGGCAATGAATACGGAGAGTCCCTGTGAGGCAGCAAATGAAAGTAAGTCTGGAGAGGCACAAAAAGAGGAGGCAGCGGTAAATGAAAGTAAGTCTGGAGAGGCACAAAAAGAGGAGGC
GGCAAATGAAAGTAAGTATGGAGAGGCACAAAAAGAGGATGCAGCAAATGAAAGTAAGTCTGGAGAGGCACACAAAGAGGAGGTGGCAATTGAAAGTAAGTCTGGAGAGGCACAAAAAGAGGAGATCAAATTGACTCGCGAGGACATAGAACTTGGTTTGTGGAAATATGGTATAGTGAAGTGGAGAAGTTACAAAAAAC
ATTTCAATTTTTCACAAGTGCCGGAAGTTGAAGAGTACAGAAAGCACTATATATGATACTCGTGAACTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAGTTTTTGAGCCTGAACAGTTGATTGTTTTTTTGCCGACTACAAAGGGACATTCCACAGTTGCTCGAAA
GAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCATCTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGTTGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATTGCATTGTGCATGGTCAATGGAGGGCATTACCAACAATGTACAAAAATCTACAGAGAAATCAGGTCAT
CCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTTGAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCATGTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGATATTATATACAGCAGAGCAAATGCTATGCAATCAGTTGTTTTACGAGCTTGATCCTCACGGGGAATGC
TGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACTGCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAGAAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTACCAGAGGTGCTACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGAAATGTTGGGATTGCAGAGAG
TAGCACTGTTTCAAGGTCTCTTTTAAAAGAAAGATTTAAAATTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACAAACACAGTGGATAGTTCCAGATGTGGAACTTCGGGAATCACTAAGACTAGCAGTTGCAGAAGTGTTATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGGTGCACCAATACAAAGTGGGA
GGAATCCTAATAAGTACATCAAATACATGCCTGAAGATTTGGAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCAAGGGTGACCAAAAGCGATAATATTTTAATCTATACCTCGTTTTCAAGCATATTTTATTTGAGCGTATTTCCAAGGTAAAGAGGCTATTTCAAGTTTCAGAGATTTTTGGGGTAAATTTCCAT
TTCCATTTCCACCAATTTTTCAGATTGATTGAAGGAGCTAGGTATACCTTTGAAGTGCCAATGATTTTATTGAGTTATGAAATGATCTAGTTGGCCTCGAGGGTAGACATTTTATCTCAAAAATTTGATTGGTGCTTTTATGTTTTAAAGGCTGATTCCAGAATTTTCAATTTGATTAATTCATTTTTTTAAGAATGCAT
CGTATATTTCTTCATGGAACAAAGAGAAATGAATTAATTCCTTCATGTTATTAATTAATTTTTAGTTCATGTACGACATAAAATACACACAAGTTGAAGAGATCAGCAGAAATGCACTGAATCATTTTTTCTAAAATAAATATTATTAAAAAAAACATATTGATGATGATTACCGTCCTTTGAAACCAACTTTGGTCTAT
TGGCCCTTACGAGAGAAAGTGGTAAGAGATTAATTGGTTTACTTTATAATTTTATTTCTATACTCAAATTAGAGAACCTTTCCTAAATCTCCAGTTTTGATGAAACAGTGAATACAGCCACTTATTGCAGTCATCATTCCAATAA
>TRINITY_DN45052_c3_g1_i2 from sample A8 / Example unspliced isoform:TTTTAACTTCCAAGGCCACCAAACTCCAGTGTCTTGCGTGTTACCCCACATGTCCACACCACCATGCATTGAAAACAACCTCATTGTCTATTTACCACCTTCAATACGTGCATCTTTCTAAGTTTGATCGCGCATAACATCAAGACCGCTATCAAGAAGCTGGCGAGCCACAGCAATTTCTATATACAACTCGTCATCAC
ACGCCATAATTCAGGACATCAGAGTACATAAAAAGGTTTGGAAGGCCAGCATTCAGTGATTCATCCATAGGCATAACTGAATTGTATTCTTATAATGGAGGTGGAGATGGAGAGCGCTAAAAAATTGAAGGAAAGCTTGCTGAAGAGCCAGACTGTAACAGACGCCATGCTCACCGTTTTGGTTTCCTTTGATCGGCGCC
TCTCATCATTGGACTCTGCAATGCGCCCCACACAGGTCAAAACAGATGAGATTAGAAAAGCTCATGAGAATATTGAAAAGACACTCAAAGCAGCAGAGGCAGTTTTGACACACTATGATATCTCCCATCAGGTAGAGGCACAGATAATGAAAGGACCCCATGTTGATTTGAATGGCTTTCTTATGGCAGTGGAGAAGTTA
CAAAAAACACTTGATTTTTTCACAAGTGCTGGCAAGTTGAAGAGCACAGAAAGCACCATATATGATACTCGTGAACTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAGTTTTTGAGCCTGAACAGTTGATTGTTTTTTTGCCGACTACAAAGGGACATTCCACAGT
TGCTCGAAAGAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCATCTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGTTGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATTGCATTGTGCATGGTCAATGGAGGGCATTACCAACAATGTACAAAAATCTACAGAGAAA
TCAGGTCATCCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTTGAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCATGTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGATATTATATACAGCAGAGCAAATGCTATGCAATCAGTTGTTTTACGAGCTTGATCCTCAC
GGGGAATGCTGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACTGCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAGAAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTACCAGAGgttcaggcattatttggagcaaaagcatctgcagaatgtctgtctagttttaa
agaattaatgaagaggttgagtcagacagcatgcaatacactggatgaatttggagaagcggtggaaaaggatgccactaaggcagcaatccatgatggcaccgttcatcctctgaccagctatgttataaactatgtgaagtttttgtttggttataagactacattagaacacttgtttgaggatgaaaaaaaggatg
atctatcatcaaaaatctgccacatagtgtccatacttctaactaatctagaaggcaaatcaaagcagtacaaagaccctgcgttgatgcatctgtttctaatgaacaacatccactatatagttaaatctgttagaaacctacctgttttacttgtcttaatcctggaattgcatgagttaatcttaccaccagctaga
aaccttgtcatgggcagatctgaagcaaggaacttgttaggtgaagactgggtccagaggcatcgccgcttagttcagcagcatgccagtggttaccaacgtacttcctggagcaagGTGCTACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGAAATGTTGGGATTGCAGAGAGTAGCACTGTTTCAAGGTCTCT
TTTAAAAGAAAGATTTAAAATTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACAAACACAGTGGATAGTTCCAGATGTGGAACTTCGGGAATCACTAAGACTAGCAGTTGCAGAAGTGTTATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGGTGCACCAATACAAAGTGGGAGGAATCCTAATAAGTACATCA
AATACATGCCTGAAGATTTGGAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCAAGGGTGACCAAAAGCGATAATATTTTAATCTATACCTCGTTTTCAAGCATATTTTATTTGAGCGTATTTCCAAG
Intron 4 GTATGACCCA ... TATTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.65 | 35 | 10 | 5 |
| A2 | 17.46 | 26 | 5 | 6 |
| A3 | 16.83 | 42 | 7 | 10 |
| A4 | 13.16 | 33 | 4 | 6 |
| A5 | 26.67 | 11 | 6 | 2 |
| A6 | 18.95 | 77 | 14 | 22 |
| A7 | 19.52 | 134 | 38 | 27 |
| A8 | 16.39 | 153 | 40 | 20 |
| A9 | 19.47 | 122 | 31 | 28 |
| A10 | 19.17 | 78 | 16 | 21 |
>TRINITY_DN47177_c0_g3_i8 from sample A7 / Example spliced isoformGGAGGCGGCAAATGAAAGTAAGTATGGAGAGGCACAAAAAGAGGAGGCGGCAAATGAAAGTAAGTCTGGAGAGGCACAAAAAGAGGAGGCGGCAAATGAAAGTAAGTATGGAGAGGCACAAAAAGAGGATGCAGCAAATGAAAGTAAGTCTGGAGAGGCACAAAAAGAGGAGATCAAATTGACTCGCGAGGACATAGAAC
TTGGTTTGTGGAAATATGGTATAGTGAAGACTTCAAATCTTCAATTTGCAGGTAGAGGCAGAGATAATGAAAGGACCCCATGTTGATTTGAATGGCTTTCTTATGGCAGTGGAGAAGTTACAAAAAACATTTCAATTTTTCACAAGTGCCGGAAGTTGAAGAGTACAGAAAGCACTATATATGATACTCGTGAACTACTT
TCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAGTTTTTGAGCCTGAACAGTTGATTGTTTTTTTGCCGACTACAAAGGGACATTCCACAGTTGCTCGAAAGAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCATCTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGT
TGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATTGCATTGTGCATGGTCAATGGAGGGCATTACCAACAATGTACAAAAATCTACAGAGAAATCAGGTCATCCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTTGAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCAT
GTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGATATTATATACAGCAGAGCAAATGCTATGCAATCAGTTGTTTTACGAGCTTGATCCTCACGGGGAATGCTGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACTGCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAG
AAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTACCAGAGGTTCAGGCATTATTTGGAGCAAAAGCATCTGCAGAATGTCTGTCTAGTTTTAAAGAATTAATGAAGAGGTTGAGTCAGACAGCATGCAATACACTGGATGAATTTGGAGAAGCGGTGGAAAAGGATGCCACTAA
GGCAGCAATCCATGATGGCACCGTTCATCCTCTGACCAGCTATGTTATAAACTATGTGAAGTTTTTGTTTGGTTATAAGACTACATTAGAACACTTGTTTGAGGATGAAAAAAAGGATGATCTATCATCAAAAATCTGCCACATAGTGTCCATACTTCTAACTAATCTAGAAGGCAAATCAAAGCAGTACAAAGACCCTG
CGTTGATGCATCTGTTTCTAATGAACAACATCCACTATATAGTTAAATCTGTTAGAAAATCTGAAGCAAGGAACTTGTTAGGTGAAGACTGGGTCCAGAGGCATCGCCGCTTAGTTCAGCAGCATGCCAGTGGTTACCAACGTACTTCCTGGAGCAAGGTGCTACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGA
AATGTTGGGATTGCAGAGAGTAGCACTGTTTCAAGGTCTCTTTTAAAAGAAAGATTTAAAATTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACAAACACAGTGGATAGTTCCAGATGTGGAACTTCGGGAATCACTAAGACTAGCAGTTGCAGAAGTGTTATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGG
TGCACCAATACAAAGTGGGAGGAATCCTAATAAGTACATCAAATACATGCCTGAAGATTTGGAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCAAGGGTGACCAAAAGCGATAATATTTTAATCTATACCTCGTTTTCAAGCATATTTTATTTGAGCGTATTTCCAAGGGCACTAATAGAGAAGGATCCACATGGC
ACTTGAATGAAAAATGCAGATATGTGATTCGGAGAATTTCTTTCATTAATGAGACTTCTGAGCCTGTAAAGAGGAGCCTGAAGCAGCCACGTGTACCTAATAAGTGCAGGGTGTACCTTTCAACCGAGTCTACCTTAGAAAATCTTTTGTGTACGAGACTTTTAATAAGTTTCAATTATTTCAAAAACAATTGCAAGCTC
AAAGAGTCGGAGTATTGATTTTCTGTAAAAAGTCCAAATGAATGAAACTGAGAGAGATTTTGACATAACTCTGCACAAAAAGCCCAAGTGTTCAGGAATATGGTCGGTGCAATTCCTTCCAAAGAATGATGTTTGAGAAGATAACTGAATGGTGTATGCGTGACTAAATACATAATAAAATAGAATCAACCAAG
>TRINITY_DN47177_c0_g3_i3 from sample A7 / Example unspliced isoform:TATATAGTTAAATCTGTTAGAAACCTACCTGTTTTACTTGTCTTAATCCTGGAATTGCATGAGTTAATCTTACCACCAGCTAGAAACCTTGTCATGGGCAGATCTGAAGCAAGGAACTTGTTAGGTGAAGACTGGGTCCAGAGGCATCGCCGCTTAGTTCAGCAGCATGCCAGTGGTTACCAACGTACTTCCTGGAGCAA
GGTGCTACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGAAATGTTGGGATTGCAGAGAGTAGCACTGTTTCAAGGTCTCTTTTAAAAGAAAGATTTAAAATTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACAAACACAGTGGATAGTTCCAGATGTGGAACTTCGGGAATCACTAAGACTAGCAGTTGCAG
AAGTGTTATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGGgtatgacccaatacactgaacaatttagttcatagaattatatctgacttagtcaaaatgttgaatcttagctaaatatatgttgagaatattgtctactatcgttacattgctaccaggtgctcgactttttcctgtgatatagtgtgaagctata
tgctaagagtgtggtggtgaagtctttatactgattcatttattttttcacttaagcttcgttatatttttcagTGCACCAATACAAAGTGGGAGGAATCCTAATAAGTACATCAAATACATGCCTGAAGATTTGGAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCAAGGGTGACCAAAAGCGATAATATTTTAA
TCTATACCTCGTTTTCAAGCATATTTTATTTGAGCGTATTTCCAAGG
Intron 5 GTTCAGGCAT ... CTGGAGCAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 78.57 | 15 | 71 | 39 |
| A2 | 63.89 | 26 | 49 | 43 |
| A3 | 60 | 28 | 49 | 35 |
| A4 | 63.65 | 24 | 33 | 51 |
| A5 | 80 | 3 | 18 | 6 |
| A6 | 53.85 | 24 | 22 | 34 |
| A7 | 50.92 | 107 | 100 | 122 |
| A8 | 54.88 | 74 | 64 | 116 |
| A9 | 56.81 | 84 | 99 | 122 |
| A10 | 59.22 | 52 | 73 | 78 |
>TRINITY_DN130287_c2_g2_i10 from sample A1 / Example spliced isoformGCGAATAATTATGACGCTTTGAACAACTAGTTAGTCACTCCCCTTGAAGACCAGTGAATTTGAACTTCCAAATCCACCAAACTACAATGTCTTGCGTGTTACCCTACATGTCCATACCACCATGCATTGAAAACAACCTCATTGTCTATTTACCACCTTCAATACGTGCATCTTTCTAAGTTTGATCGCGCATAACATCA
AGACCGCTATCAAGAAGCTGGCGAGCCACAGCAATTTCTATATACGACTCGTCATCACACGCCATAATTCAGGACATCAGAGTACATAAAAAGGTTTGGAAGGCCAGCATTCAGTGATTCATCCATAGGCATAACTGAATTGTATTCTTATAATGGAGGTGGAGATGGAGAGCGCTAAAAAATTGAAGGAAAGCTTGCTG
AAGAGCCAGACTGTAACAGACGCCATGCTCACCGTTTTGGTTTCCTTTGATCGGCGCCTCTCATCATTGGACTCTGCAATGCGCCCCACACAGGTCAAAACAGATGAGATTAGAAAAGCTCATGAGAATATTGAAAAGACACTCAAAGCAGCAGAGGCAGTTTTGACACACTATGATATCTCCCATCAGGTAGAGGCACA
GATAATGAAAGGACCCCATGTTGATTTGAATGGCTTTCTTATGGCAGTGGAGAAGTTACAAAAAACACTTGATTTTTTCACAAGTGCTGGCAAGTTGAAGAGCACAGAAAGCACCATATATGATACTCGTGAACTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAG
TTTTTGAGCCTGAACAGTTGATTGTTTTTTTGCCGACTACAAAGGGACATTCCACAGTTGCTCGAAAGAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCATCTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGTTGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATT
GCATTGTGCATGGTCAATGGAGGGCATTACCAACAATGTACAAAAATCTACAGAGAAATCAGGTCATCCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTTGAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCATGTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGAT
ATTATATACAGCAGAGCAAATGCTATGCAATCAGTTGTTTTACGAGCTTGATCCTCACGGGGAATGCTGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACTGCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAGAAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTAC
CAGAGGTGCTACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGAAATGTTGGGATTGCAGAGAGTAGCACTGTTTCAAGGTCTCTTTTAAAAGAAAGATTTAAAATTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACAAACACAGTGGATAGTTCCAGATGTGGAACTTCGGGAATCACTAAGACTAGCAGTT
GCAGAAGTGTTATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGGTGCACCAATACAAAGTGGGAGGAATCCTAATAAGTACATCAAATACATGCCTGAAGATTTGGAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCAAGGGTGACCAAAAGCGATAATATTTTAATCTATACCTCGTTTTCAAGCATATTTT
ATTTGAGCGTATTTCCAAGG
>TRINITY_DN130287_c2_g2_i2 from sample A1 / Example unspliced isoform:GCGAATAATTATGACGCTTTGAACAACTAGTTAGTCACTCCCCTTGAAGACCAGTGAATTTGAACTTCCAAATCCACCAAACTACAATGTCTTGCGTGTTACCCTACATGTCCATACCACCATGCATTGAAAACAACCTCATTGTCTATTTACCACCTTCAATACGTGCATCTTTCTAAGTTTGATCGCGCATAACATCA
AGACCGCTATCAAGAAGCTGGCGAGCCACAGCAATTTCTATATACGACTCGTCATCACACGCCATAATTCAGGACATCAGAGTACATAAAAAGGTTTGGAAGGCCAGCATTCAGTGATTCATCCATAGGCATAACTGAATTGTATTCTTATAATGGAGGTGGAGATGGAGAGCGCTAAAAAATTGAAGGAAAGCTTGCTG
AAGAGCCAGACTGTAACAGACGCCATGCTCACCGTTTTGGTTTCCTTTGATCGGCGCCTCTCATCATTGGACTCTGCAATGCGCCCCACACAGGTCAAAACAGATGAGATTAGAAAAGCTCATGAGAATATTGAAAAGACACTCAAAGCAGCAGAGGCAGTTTTGACACACTATGATATCTCCCATCAGGTAGAGGCACA
GATAATGAAAGGACCCCATGTTGATTTGAATGGCTTTCTTATGGCAGTGGAGAAGTTACAAAAAACACTTGATTTTTTCACAAGTGCTGGCAAGTTGAAGAGCACAGAAAGCACCATATATGATACTCGTGAACTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAG
TTTTTGAGCCTGAACAGTTGATTGTTTTTTTGCCGACTACAAAGGGACATTCCACAGTTGCTCGAAAGAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCATCTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGTTGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATT
GCATTGTGCATGGTCAATGGAGGGCATTACCAACAATGTACAAAAATCTACAGAGAAATCAGGTCATCCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTTGAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCATGTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGAT
ATTATATACAGCAGAGCAAATGCTATGCAATCAGTTGTTTTACGAGCTTGATCCTCACGGGGAATGCTGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACTGCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAGAAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTAC
CAGAGgttcaggcattatttggagcaaaagcatctgcagaatgtctgtctagttttaaagaattaatgaagaggttgagtcagacagcatgcaatacactggatgaatttggagaagcggtggaaaaggatgccactaaggcagcaatccatgatggcaccgttcatcctctgaccagctatgttataaactatgtgaag
tttttgtttggttataagactacattagaacacttgtttgaggatgaaaaaaaggatgatctatcatcaaaaatctgccacatagtgtccatacttctaactaatctagaaggcaaatcaaagcagtacaaagaccctgcgttgatgcatctgtttctaatgaacaacatccactatatagttaaatctgttagaaaatc
tgaagcaaggaacttgttaggtgaagactgggtccagaggcatcgccgcttagttcagcagcatgccagtggttaccaacgtacttcctggagcaagGTGCTACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGAAATGTTGGGATTGCAGAGAGTAGCACTGTTTCAAGGTCTCTTTTAAAAGAAAGATTTAAAA
TTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACAAACACAGTGGATAGTTCCAGATGTGGAACTTCGGGAATCACTAAGACTAGCAGTTGCAGAAGTGTTATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGGTGCACCAATACAAAGTGGGAGGAATCCTAATAAGTACATCAAATACATGCCTGAAGATTTG
GAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCAAGGGTGACCAAAAGCGATAATATTTTAATCTATACCTCGTTTTCAAGCATATTTTATTTGAGCGTATTTCCAAGGGCACTAATAGAGAAGGATCCACATGGCACTTGAATGAAAAATGCAGATATGTGATTCGGAGAATTTCTTTCATTAATGAGACTTCTGA
GCCTGTAAAGAGGAGCCTGAAGCAGCCACGTGTACCTAATAAGTGCAGGGTGTACCTTTCAACCGAGTCTACCTTAGAAAATCTTTTGTGTACGAGACTTTTAATAAGTTTCAATTATTTCAAAAACAATTGCAAGCTCAAAGAGTCGGAGTATTGATTTTCTGTAAAAAGTCCAAATGAATGAAACTGAGAGAGATTTT
GACATAACTCTGCACAAAAAGCCCAAGTGTTCAGGAATATGGTCGGTGCAATTCCTTCCAAAGAATGATGTTTGAGAAGATAACTGAATGGTGTATGCGTGACTAAATACATAATAAAATAGAATCAACCAATATAATTCTTTTGCT
Intron 6 GTAAAGAGGC ... TCATTCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 29.17 | 51 | 31 | 11 |
| A2 | 34.04 | 31 | 25 | 7 |
| A3 | 16 | 42 | 14 | 2 |
| A4 | 23.26 | 33 | 17 | 3 |
| A5 | 36.59 | 13 | 14 | 1 |
| A6 | 38.71 | 57 | 67 | 5 |
| A7 | 29.71 | 168 | 96 | 46 |
| A8 | 30.2 | 193 | 108 | 59 |
| A9 | 30.65 | 207 | 127 | 56 |
| A10 | 25.08 | 121 | 61 | 20 |
>TRINITY_DN45052_c3_g1_i1 from sample A8 / Example spliced isoformTTTTAACTTCCAAGGCCACCAAACTCCAGTGTCTTGCGTGTTACCCCACATGTCCACACCACCATGCATTGAAAACAACCTCATTGTCTATTTACCACCTTCAATACGTGCATCTTTCTAAGTTTGATCGCGCATAACATCAAGACCGCTATCAAGAAGCTGGCGAGCCACAGCAATTTCTATATACAACTCGTCATCAC
ACGCCATAATTCAGGACATCAGAGTACATAAAAAGGTTTGGAAGGCCAGCATTCAGTGATTCATCCATAGGCATAACTGAATTGTATTCTTATAATGGAGGTGGAGATGGAGAGCGCTAAAAAATTGAAGGAAAGCTTGCTGAAGAGCCAGACTGTAACAGACGCCATGCTCACCGTTTTGGTTTCCTTTGATCGGCGCC
TCTCATCATTGGACTCTGCAATGCGCCCCACACAGGTCAAAACAGATGAGATTAGAAAAGCTCATGAGAATATTGAAAAGACACTCAAAGCAGCAGAGGCAGTTTTGACACACTATGATATCTCCCATCAGGTAGAGGCACAGATAATGAAAGGACCCCATGTTGATTTGAATGGCTTTCTTATGGCAGTGGAGAAGTTA
CAAAAAACACTTGATTTTTTCACAAGTGCTGGCAAGTTGAAGAGCACAGAAAGCACCATATATGATACTCGTGAACTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAGTTTTTGAGCCTGAACAGTTGATTGTTTTTTTGCCGACTACAAAGGGACATTCCACAGT
TGCTCGAAAGAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCATCTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGTTGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATTGCATTGTGCATGGTCAATGGAGGGCATTACCAACAATGTACAAAAATCTACAGAGAAA
TCAGGTCATCCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTTGAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCATGTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGATATTATATACAGCAGAGCAAATGCTATGCAATCAGTTGTTTTACGAGCTTGATCCTCAC
GGGGAATGCTGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACTGCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAGAAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTACCAGAGGTTCAGGCATTATTTGGAGCAAAAGCATCTGCAGAATGTCTGTCTAGTTTTAA
AGAATTAATGAAGAGGTTGAGTCAGACAGCATGCAATACACTGGATGAATTTGGAGAAGCGGTGGAAAAGGATGCCACTAAGGCAGCAATCCATGATGGCACCGTTCATCCTCTGACCAGCTATGTTATAAACTATGTGAAGTTTTTGTTTGGTTATAAGACTACATTAGAACACTTGTTTGAGGATGAAAAAAAGGATG
ATCTATCATCAAAAATCTGCCACATAGTGTCCATACTTCTAACTAATCTAGAAGGCAAATCAAAGCAGTACAAAGACCCTGCGTTGATGCATCTGTTTCTAATGAACAACATCCACTATATAGTTAAATCTGTTAGAAAATCTGAAGCAAGGAACTTGTTAGGTGAAGACTGGGTCCAGAGGCATCGCCGCTTAGTTCAG
CAGCATGCCAGTGGTTACCAACGTACTTCCTGGAGCAAGGTGCTACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGAAATGTTGGGATTGCAGAGAGTAGCACTGTTTCAAGGTCTCTTTTAAAAGAAAGATTTAAAATTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACAAACACAGTGGATAGTTCCAGA
TGTGGAACTTCGGGAATCACTAAGACTAGCAGTTGCAGAAGTGTTATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGGTGCACCAATACAAAGTGGGAGGAATCCTAATAAGTACATCAAATACATGCCTGAAGATTTGGAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCAAGGGTGACCAAAAGCGATAAT
ATTTTAATCTATACCTCGTTTTCAAGCATATTTTATTTGAGCGTATTTCCAAGGGCACTAATAGAGAAGGATCCACATGGCACTTGAATGAAAAATGCAGATATGTGATTCGGAGAATTTCTTTCATTAATGAGACTTCTGAGCCTGTAAAGAGGAGCCTGAAGCAGCCACGTGTACCTAATAAGTGCAGGGTGTACCTT
TCAACCGAGTCTACCTTAGAAAATCTTTTGTGTACGAGACTTTTAATAAGTTTCAATTATTTCAAAAACAATTGCAAGCTCAAAGAGTCGGAGTATTGATTTTCTGTAAAAAGTCCAAATGAATGAAACTGAGAGAGATTTTGACATAACTCTGCACAAAAAGCCCAAGTGTTCAGGAATATGGTCGGTGCAATTCCTTC
CAAAGAATGATGTTTGAGAAGATAACTGAATGGTGTATGCGTGACTAAATACATAATAAAATAGAATCAACCAATATAATTCTTTTGCTAAAAAAAAAAAAAAATAATGATTTTTGATAAGATAACTGAATGTTTTAT
>TRINITY_DN45052_c3_g1_i11 from sample A8 / Example unspliced isoform:TTTTAACTTCCAAGGCCACCAAACTCCAGTGTCTTGCGTGTTACCCCACATGTCCACACCACCATGCATTGAAAACAACCTCATTGTCTATTTACCACCTTCAATACGTGCATCTTTCTAAGTTTGATCGCGCATAACATCAAGACCGCTATCAAGAAGCTGGCGAGCCACAGCAATTTCTATATACAACTCGTCATCAC
ACGCCATAATTCAGGACATCAGAGTACATAAAAAGGTTTGGAAGGCCAGCATTCAGTGATTCATCCATAGGCATAACTGAATTGTATTCTTATAATGGAGGTGGAGATGGAGAGCGCTAAAAAATTGAAGGAAAGCTTGCTGAAGAGCCAGACTGTAACAGACGCCATGCTCACCGTTTTGGTTTCCTTTGATCGGCGCC
TCTCATCATTGGACTCTGCAATGCGCCCCACACAGGTCAAAACAGATGAGATTAGAAAAGCTCATGAGAATATTGAAAAGACACTCAAAGCAGCAGAGGCAGTTTTGACACACTATGATATCTCCCATCAGGTAGAGGCACAGATAATGAAAGGACCCCATGTTGATTTGAATGGCTTTCTTATGGCAGTGGAGAAGTTA
CAAAAAACACTTGATTTTTTCACAAGTGCTGGCAAGTTGAAGAGCACAGAAAGCACCATATATGATACTCGTGAACTACTTTCCAAAGCAATGTATAAGCTTGAGGAAGAATTTAAGCAGTTGCTGGCAGAACATAGCAAAGTTTTTGAGCCTGAACAGTTGATTGTTTTTTTGCCGACTACAAAGGGACATTCCACAGT
TGCTCGAAAGAGTTCTTCAAGTTTGGTTTCCTTGTTCAACCCATCTTCCAAAAAGACTGCAAATGGATCCAGAGTGGGAGTTGCACCTGTTGTATTACCAACTTTGATTCCAACCAAGGTGGTAACTGAATTATATGAGATTGCATTGTGCATGGTCAATGGAGGGCATTACCAACAATGTACAAAAATCTACAGAGAAA
TCAGGTCATCCAGTCTGAATCAAACTCTCCAGAAATTTGGAGTTGAGAAATTCTCAAAAGAGGATTTGCAAAAATTGTCATGTGAGTCATTAGAGAGGAAGATAGGAACTTGGATCCAGTGTTTGCGTGTTGCTGTTAAGATATTATATACAGCAGAGCAAATGCTATGCAATCAGTTGTTTTACGAGCTTGATCCTCAC
GGGGAATGCTGCTTTGCAGAAGTCATTGAGTCGAGCATGAAACTGCTTTTGAACTTTGGAGAAGCCACAGTAAAGAGCAAGAAGTCTCCAGAGAAGTTATTCATGCTACTTGACATGTATGATGCAATGTATGATCTTCTACCAGAGGTTCAGGCATTATTTGGAGCAAAAGCATCTGCAGAATGTCTGTCTAGTTTTAA
AGAATTAATGAAGAGGTTGAGTCAGACAGCATGCAATACACTGGATGAATTTGGAGAAGCGGTGGAAAAGGATGCCACTAAGGCAGCAATCCATGATGGCACCGTTCATCCTCTGACCAGCTATGTTATAAACTATGTGAAGTTTTTGTTTGGTTATAAGACTACATTAGAACACTTGTTTGAGGATGAAAAAAAGGATG
ATCTATCATCAAAAATCTGCCACATAGTGTCCATACTTCTAACTAATCTAGAAGGCAAATCAAAGCAGTACAAAGACCCTGCGTTGATGCATCTGTTTCTAATGAACAACATCCACTATATAGTTAAATCTGTTAGAAAATCTGAAGCAAGGAACTTGTTAGGTGAAGACTGGGTCCAGAGGCATCGCCGCTTAGTTCAG
CAGCATGCCAGTGGTTACCAACGTACTTCCTGGAGCAAGGTGCTACAGTACATAAGTTGGCAAGGATTAGCAGCATCAGGAAATGTTGGGATTGCAGAGAGTAGCACTGTTTCAAGGTCTCTTTTAAAAGAAAGATTTAAAATTTTCAACCAATGCTTCGAGGAGCTCTATCAAAAACAAACACAGTGGATAGTTCCAGA
TGTGGAACTTCGGGAATCACTAAGACTAGCAGTTGCAGAAGTGTTATTGCCTGCCTACCGATCCTACATAAAGCGTTTTGGTGCACCAATACAAAGTGGGAGGAATCCTAATAAGTACATCAAATACATGCCTGAAGATTTGGAGCAGAAGTTGTCAGATTTTTTTGAAGGAGTACCCAAGGGTGACCAAAAGCGATAAT
ATTTTAATCTATACCTCGTTTTCAAGCATATTTTATTTGAGCGTATTTCCAAGgtaaagaggctatttcaagtttcagagatttttggggtaaatttccatttccatttccaccaatttttcagattgattgaaggagctaggtatacctttgaagtgccaatgattttattgagttatgaaatgatctagttggcctcg
agggtagacattttatctcaaaaatttgattggtgcttttatgttttaaaggctgattccagaattttcaatttgattaattcatttttttaagaatgcatcgtatatttcttcatggaacaaagagaaatgaattaattccttcatgttattaattaatttttagttcatgtacgacataaaatacacacaagttgaag
agatcagcagaaatgcactgaatcattttttctaaaataaatattattaaaaaaaacatattgatgatgattaccgtcctttgaaaccaactttggtctattggcccttacgagagaaagtggtaagagattaattggtttactttataattttatttctatactcaaattagagaacctttcctaaatctccagttttg
atgaaacagtgaatacagccacttattgcagtcatcattccaataacgtcagaataagcataagcaaacaaactacacatgacttatgtggattagttcatatattagtatctttcatagattcaattccatgcagcaaatgaaaaaactgcagaacaatatagaatttgtctgatttgtttaggaatatgttatatttc
aaatcacgcatattgataataagcagcagggtcatttttacatttgataccttacaatgaacataaagcttaatttgtgtaattttttacctgaaataacacttttccatttttaaagatagatagccaccatttaataattatttttgcaagtctataatgccccatttttcttttgcattaagattttgttattttta
tatttttgtctattatttgaattctcttttcatggtatagtttaattccattaagaagcggtatatttgatttgaggaatcatgttgttggctttgattgaagttttgtagtatgaattcttttaaattaatattaacaacgttggtttttatcattcacagGGCACTAATAGAGAAGGATCCACATGGCACTTGAATGA
AAAATGCAGATATGTGATTCGGAGAATTTCTTTCATTAATGAGACTTCTGAGCCTGTAAAGAGGAGCCTGAAGCAGCCACGTGTACCTAATAAGTGCAGGGTGTACCTTTCAACCGAGTCTACCTTAGAAAATCTTTTGTGTACGAGACTTTTAATAAGTTTCAATTATTTCAAAAACAATTGCAAGCTCAAAGAGTCGG
AGTATTGATTTTCTGTAAAAAGTCCAAATGAATGAAACTGAGAGAGATTTTGACATAACTCTGCACAAAAAGCCCAAGTGTTCAGGAATATGGTCGGTGCAATTCCTTCCAAAGAATGATGTTTGAGAAGATAACTGAATGGTGTATGCGTGACTAAATACATAATAAAATAGAATCAACCAATATAATTCTTTTGCTAA
AAAAAAAAAAAAATAATGATTTTTGATAAGATAACTGAATGTTTTAT