NA ----> NA
Intron 1 GTAAGTAATG ... TCCTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.08 | 10 | 3 | 3 |
| A2 | 31.43 | 24 | 6 | 16 |
| A3 | 30.43 | 8 | 3 | 4 |
| A4 | 13.04 | 10 | 0 | 3 |
| A5 | 20 | 6 | 2 | 1 |
| A6 | 21.12 | 99 | 27 | 26 |
| A7 | 25 | 78 | 28 | 24 |
| A8 | 29.1 | 95 | 22 | 56 |
| A9 | 22.89 | 96 | 26 | 31 |
| A10 | 26.44 | 64 | 19 | 27 |
>TRINITY_DN27862_c0_g1_i2 from sample A6 / Example spliced isoformCTGGGAGAATGGTAAAGATAGTATATGAACAAAGACTAAAATTCTCAACCAGATCTTTTTCAGAAACTCGCGACTCACAAAGCACGAGCTCCCCCGGATAACAAAGACTATCAAACGCAGACCACAGGCCGTCCATTGTCATGGCATTTCATGGAGGAAGCATGATGACAATACATTCTTCTGCTCTTCTCAACTCTAAA
GTATATGGTCTTCATTTGCCTAAAATCTCCCGCTTCTCGAAGCAACGCCCACGCCCCGAGCAGGAGGAGCCCAGCGTGGTACGAGTCTTATGTAGAAAAAGGGAAAGAAATTGGGATCGTGATCCATATAAAGTGATTGACATTACACCTCCTCCAAGGAATTTGGGAATTCGTTGCTTTCCTTCGAATATGCAATGTGG
GGAATCTGTCACTATAGAAGATAAAGCTTACATTGTTTCTGCTGTGACTTATCGTTACCAGCTTCGGAAAGGAAAATATGAACCCAGTGAGAAGAGACTAGATGTGCAGTCAACTGGGAGATATTTGTTGAACAATTATCTGGACATGTTACTAGAGGAGTCCTGATATTGGGCATGAAAAGCTCAGAAGATTAATGGAC
ATTGTAACATGCATATCTTTTGCTCAAATGAATCTCTAGTGACTAGATTATGCCTTGCTTCATTTTGAAGCTGTCCTTCAAGGGCTATTTGACTGGAGGAATCAACTTGCCTTTCTAACCAGAAAGTGGTATTTAACAGGATTGGCTATCATACGAATTTGGCTCTGCCTTCCTATGAAGATTAATTTTCTCTTCCGGTA
GCTTTAGCATCGTAAACATTTGTTTGGCTTAATGTTAGTGAACTGTTCAACCTTTCACGAAGTGTGCCCACTCCAAATGAAGCCCATCAGGGATGACAAGTGGATGTGAAATATTAAAAGTTTCTATATTGCATATCAGAGTCTATAGCACGAATGCAAATTGTTTGCATAGTTGTTGCTCCATGCAGTTAAGTTTAAAT
TTAGAATTTAAAGTCAAAATTTTAAATATTAATGTCACTGGTGATCAAAGTTAATAAAAGTACAATATCAACAATCAATGTGTGTATTGGGAGTTCCTAATGTATCTCTAAGGATTACCTTTACTGGTAAACAAGTGAAATGAACAACAAAGCTGATGAACTTATAGATTGGATATAGTTAATGTGTGTATTGGGAGTTC
CTAATGTATCTCTAAGGATTACCTTTACTGGTAAACAAGTGAAATGAACAACAAAGCTGATGAACTTATAGATTGGATATAGTTGCAATGATATGAAGGAGAA
>TRINITY_DN27862_c0_g1_i1 from sample A6 / Example unspliced isoform:CTGGGAGAATGGTAAAGATAGTATATGAACAAAGACTAAAATTCTCAACCAGATCTTTTTCAGAAACTCGCGACTCACAAAGCACGAGCTCCCCCGGATAACAAAGACTATCAAACGCAGACCACAGGCCGTCCATTGTCATGGCATTTCATGGAGGAAGCATGATGACAATACATTCTTCTGCTCTTCTCAACTCTAAA
GTATATGGTCTTCATTTGCCTAAAATCTCCCGCTTCTCGAAGCAACGCCCACGCCCCGAGCAGGAGGAGCCCAGCGTGGTACGAGTCTTATGTAGAAAAAGGGAAAGAAATTGGGATCGTGATCCATATAAAGTGATTGACATTACACCTCCTCCAAGGAATTTGGGAATTCGTTGCTTTCCTTCGAATATGCAATGTGG
GGAATCTGTCACTATAGAAGATAAAGCTTACATTGTTTCTGCTGTGACTTATCGTTACCAGCTTCGGAAAGGAAAATATGAACCCAGTGAGAAGAGACTAGATGTGCAGTCAACTGGGAGATATTTGTTGAACAATTATCTGGACATGTTACTAGAGGAGTCCTGATATTGGGCATGAAAAGCTCAGAAGATTAgtaagt
aatggtttatttgtatcacatttatttggcttagtgaatcaccttccaccattcatgcgctgataaaatctatgttgtattgactgcctatccatttccattatgctgtcctgtgcagATGGACATTGTAACATGCATATCTTTTGCTCAAATGAATCTCTAGTGACTAGATTATGCCTTGCTTCATTTTGAAGCTGTCC
TTCAAGGGCTATTTGACTGGAGGAATCAACTTGCCTTTCTAACCAGAAAGTGGTATTTAACAGGATTGGCTATCATACGAATTTGGCTCTGCCTTCCTATGAAGATTAATTTTCTCTTCCGGTAGCTTTAGCATCGTAAACATTTGTTTGGCTTAATGTTAGTGAACTGTTCAACCTTTCACGAAGTGTGCCCACTCCAA
ATGAAGCCCATCAGGGATGACAAGTGGATGTGAAATATTAAAAGTTTCTATATTGCATATCAGAGTCTATAGCACGAATGCAAATTGTTTGCATAGTTGTTGCTCCATGCAGTTAAGTTTAAATTTAGAATTTAAAGTCAAAATTTTAAATATTAATGTCACTGGTGATCAAAGTTAATAAAAGTACAATATCAACAATC
AATGTGTGTATTGGGAGTTCCTAATGTATCTCTAAGGATTACCTTTACTGGTAAACAAGTGAAATGAACAACAAAGCTGATGAACTTATAGATTGGATATAGTTAATGTGTGTATTGGGAGTTCCTAATGTATCTCTAAGGATTACCTTTACTGGTAAACAAGTGAAATGAACAACAAAGCTGATGAACTTATAGATTGG
ATATAGTTGCAATGATATGAAGGAGAA