sp|Q8GWV5|PUB3_ARATH ----> U-box domain-containing protein 3
Intron 1 GTGGGTTTTG ... TTATTGGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 76.47 | 4 | 13 | 13 |
| A2 | -1 | 0 | 0 | 0 |
| A3 | 60 | 9 | 8 | 19 |
| A4 | 61.11 | 7 | 13 | 9 |
| A5 | 40 | 3 | 1 | 3 |
| A6 | 40.54 | 11 | 6 | 9 |
| A7 | 48.39 | 8 | 9 | 6 |
| A8 | 83.33 | 1 | 2 | 8 |
| A9 | 72 | 7 | 17 | 19 |
| A10 | 39.13 | 28 | 18 | 18 |
>TRINITY_DN31858_c0_g1_i2 from sample A6 / Example spliced isoformAAATTGTGAGAGCAGCCTCTTTCTTGCATTATTTTTATGGATGCCACCACAAAAGGCAAGCCCAAGACCCTTCTTGAATTTTGATAAGACCAATAAAACCCAGGAATTTTGCCATGGTAGAAAACAAATCCAAAAAGAATATGGTTTCACGGTAGATTTCATTTTGTATTTTGCGAATCTGTCCTTTACTTCTCCCTGTG
GGTCTCTCACACACAGCCTCCACGTTACAACCACAACAACACATTCACAAATGCTTGTAACTTTGTGAGTAATCCGTCCCCATGTTTGACAATTCATTCGCAAATGGGCTCCCTTCCCTTCCACTCATGCTCATTGATGTGGCATTCAAAGTTAGGCCGAGTATCCACCACACATAGATATGCAGATTGATTGCTGACAG
ATTACCCGCTGGTGAGATTTCACTATTGGTGATGGCAGGTGGGGTCTCTGAGGATCGTTTTAAGGCCAAACTGTCATCTGGGTCCTCGTAATCACAGAGATGGCAGATGAGGAAGAACAGAAGGTTGAACATGGATCAGACAAGGATTGGGTCCATAATAAAAGAAGCAAGGAAAGCATGCAGGACGTTTTGTGGTCTCT
TTTATATGGAGCTCATGGTGATGTTGATGTCAGGATTAGGGCTGCCAAGGAGATCAGAAGGCTAACCAAGACTTCTGATAAAAGTAGAGCTTATTTGGCTGCAGCAGGTGTGATTGTTCCCCTTGTATCCATGCTCAAATCTGCCAATTTGGAGGCCAAGGAAGCTGCTGTGTTGGCTCTTCTGAACCTTGCAGTTGGAA
ATGAAAGGAATAAGGTCAGAATTGTGAAGGCAGGTGCAATTCCAACCCTTGTGGAACTCTTGCAGTCAGAGAATGCCAACTTAAGGGAGTCTGTTGTTGCAGCTATATTAACACTTTCGGCATCTGCCATCAATAAGCCAATCATCGGTGCTTCTGGGACTATTCCTCTCTTGGTAGAGGTGCTAACATCTGGAAGCATC
CAAGGCAAGGTTGATGCAGTAATGGCTCTGTACAACCTGTCAACATACACAGACAATTTGCTACCTATCCTTGCAGCTGGGCCTGTGCCACCTTTAATCACGTTGCTGAAAGATTGCAAGAAAACTTCTAAATTTTCAGAGAAGTTGACTGCCTTGCTAGAGTCATTGTTGGCTTTAGAAGAAGGCAGGACCACTATAGT
AAAGGAGGAAGGGGGAATTCTTGCACTGGTGGAAGCAGTTGAAGATGGTTCTCCTCAGAGTCGAGAACATGCTGTTGGAGCTCTTCTAAACCTATGTCAAGCAAATATAGGTGAATATAGGCAAGCTATCCTTAAAGAGGGAGTCATTCCAGGACTCCTTGAGCTCACAGTTCAAGGAACGTCTAAAGCCCAACAGAGAG
CTCGGATTCTTTTGCAGTTGCTGAGAGACTCGTCCACACAAAGAAATTCATCATCTAATGTACTTGAAAGTATAGTGCACAATATTGCTTCCCACATTGATGGCGTGGAGCAAGGTTCTGCAACTGCCAAACAGATGCTATCAGAGATGGTTCACCTGAGCATGGAAAAGAGCATGAAACAATTGCAGCAGAGAGCATTA
CTTTCTATACCCTCTCAGATTTCCAGATCAAATTGCTTACCTGAAGCACCATCCAAATAATATACTTTAAGATGTACAGCTATACTTTATCATCATCAAGTTATCTCTAGCCTAAGTAGAGGCTCTTGGACATTTATACATAATATACCACTTCAGGCCAATTAATGGTTTGGGTAAGTGCTTATGATCATGCACTTCTT
CAGTTCCCTGTTTTATTGGGATGTCGGTAAGATACTTCATAGGTTTATATTTTATGAATCAAGAAAATCACAAATAGCTGTGGAAGGTTGTTCTGTCTGTAGAGAAACTATTTATCTCGGAAGAGAGCTGCTGACCTTGCTTGAACCTCTAATTTATTACAAGATTATGGACACTGTACATTATGTC
>TRINITY_DN31858_c0_g1_i1 from sample A6 / Example unspliced isoform:AAATTGTGAGAGCAGCCTCTTTCTTGCATTATTTTTATGGATGCCACCACAAAAGGCAAGCCCAAGACCCTTCTTGAATTTTGATAAGACCAATAAAACCCAGGAATTTTGCCATGGTAGAAAACAAATCCAAAAAGAATATGGTTTCACGGTAGATTTCATTTTGTATTTTGCGAATCTGTCCTTTACTTCTCCCTGTG
GGTCTCTCACACACAGCCTCCACGTTACAACCACAACAACACATTCACAAATGCTTGTAACTTTGTGAGTAATCCGTCCCCATGTTTGACAATTCATTCGCAAATGGGCTCCCTTCCCTTCCACTCATGCTCATTGATGTGGCATTCAAAGTTAGGCCGAGTATCCACCACACATAGATATGCAGATTGATTGCTGACAG
ATTACCCGCTGGTGAGATTTCACTATTGGTGATGGCAGGTGGGGTCTCTGAGGATCGTTTTAAGGCCAAACTGTCATCTGGGTCCTCGTAATCACAGgtgggttttgcagaaacagtttatatatgtgttgtatctggtgtttcagagagtccaatgtgtgaatagagagctctgacattagcatattcgttattcgttc
atggttgtgtgcaattattggtagAGATGGCAGATGAGGAAGAACAGAAGGTTGAACATGGATCAGACAAGGATTGGGTCCATAATAAAAGAAGCAAGGAAAGCATGCAGGACGTTTTGTGGTCTCTTTTATATGGAGCTCATGGTGATGTTGATGTCAGGATTAGGGCTGCCAAGGAGATCAGAAGGCTAACCAAGACT
TCTGATAAAAGTAGAGCTTATTTGGCTGCAGCAGGTGTGATTGTTCCCCTTGTATCCATGCTCAAATCTGCCAATTTGGAGGCCAAGGAAGCTGCTGTGTTGGCTCTTCTGAACCTTGCAGTTGGAAATGAAAGGAATAAGGTCAGAATTGTGAAGGCAGGTGCAATTCCAACCCTTGTGGAACTCTTGCAGTCAGAGAA
TGCCAACTTAAGGGAGTCTGTTGTTGCAGCTATATTAACACTTTCGGCATCTGCCATCAATAAGCCAATCATCGGTGCTTCTGGGACTATTCCTCTCTTGGTAGAGGTGCTAACATCTGGAAGCATCCAAGGCAAGGTTGATGCAGTAATGGCTCTGTACAACCTGTCAACATACACAGACAATTTGCTACCTATCCTTG
CAGCTGGGCCTGTGCCACCTTTAATCACGTTGCTGAAAGATTGCAAGAAAACTTCTAAATTTTCAGAGAAGTTGACTGCCTTGCTAGAGTCATTGTTGGCTTTAGAAGAAGGCAGGACCACTATAGTAAAGGAGGAAGGGGGAATTCTTGCACTGGTGGAAGCAGTTGAAGATGGTTCTCCTCAGAGTCGAGAACATGCT
GTTGGAGCTCTTCTAAACCTATGTCAAGCAAATATAGGTGAATATAGGCAAGCTATCCTTAAAGAGGGAGTCATTCCAGGACTCCTTGAGCTCACAGTTCAAGGAACGTCTAAAGCCCAACAGAGAGCTCGGATTCTTTTGCAGTTGCTGAGAGACTCGTCCACACAAAGAAATTCATCATCTAATGTACTTGAAAGTAT
AGTGCACAATATTGCTTCCCACATTGATGGCGTGGAGCAAGGTTCTGCAACTGCCAAACAGATGCTATCAGAGATGGTTCACCTGAGCATGGAAAAGAGCATGAAACAATTGCAGCAGAGAGCATTACTTTCTATACCCTCTCAGATTTCCAGATCAAATTGCTTACCTGAAGCACCATCCAAATAATATACTTTAAGAT
GTACAGCTATACTTTATCATCATCAAGTTATCTCTAGCCTAAGTAGAGGCTCTTGGACATTTATACATAATATACCACTTCAGGCCAATTAATGGTTTGGGTAAGTGCTTATGATCATGCACTTCTTCAGTTCCCTGTTTTATTGGGATGTCGGTAAGATACTTCATAGGTTTATATTTTATGAATCAAGAAAATCACAA
ATAGCTGTGGAAGGTTGTTCTGTCTGTAGAGAAACTATTTATCTCGGAAGAGAGCTGCTGACCTTGCTTGAACCTCTAATTTATTACAAGATTATGGACACTGTACATTATGTC