sp|O82244|ALG3_ARATH ----> Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase
Intron 1 GTAGAGCTTA ... GCAGCCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.57 | 5 | 1 | 3 |
| A2 | 12 | 11 | 0 | 3 |
| A3 | 50 | 1 | 1 | 1 |
| A4 | 1.31 | 4 | 0.1 | 0 |
| A5 | 22.22 | 7 | 2 | 2 |
| A6 | 25.58 | 80 | 32 | 23 |
| A7 | 20.12 | 32 | 9.1 | 7 |
| A8 | 22.32 | 92.2 | 30 | 23 |
| A9 | 22.82 | 74 | 22.8 | 21 |
| A10 | 25.92 | 24.1 | 7.9 | 9 |
>TRINITY_DN41860_c1_g4_i3 from sample A6 / Example spliced isoformCCATGTATAAATATAGTTCGAACATTGGCCGCTCTCTGGGTCGTCATTTTGTTACGGGGTGTGGAGTATTCACAGTAAACTTCTATGCCCTGTGCTTCAAAATATGTTATACACAGTTACATTCAAAACATTTTTAAAACTTCAGCAGACAGATGAATGAGTCGTATGCGAGGAGGATGCCATTCGTTCACTGATTTTCT
TTTCCAACGATTGATTCTCTTTTCCAGCGATGACGAAATTGGCAGATGAGACGCCATCATCATCGACATCGCAGGGAATTGGGAATAAGAATGCACGTTTTGTGACATACTGCATTCTGCTACTCCTACTCGTCGACAGTCTGTTAACTTGTGCCATTATCGCATATGTTCCATATACTAAGATCGATTGGGATGCTTAC
ATGTCACAGGTGAGGGGCTTCATAGGAGGGGAGAGGAATTATGCAGAGCTGAGAGGGGACACAGGACCTTTAGTCTACCCTGCAGGATTCCTCTATTTTTACACGGCCATTCAGTTTTTCACGGGGGGTGCAGTCTTCCCCGCCCAGGTTATCTTTGGTATTTTGTATATCATAAACCTTGGAATCATTTTGCTGATCTA
CAAAAAGTCTAATTTGCTTCCATGGTGGGCCCTTTGCTTACTTTGTTTGTCAAAAAGAGTTCATTCAATATTCGTATTGCGTCTATTTAACGATTGTGTGGCTGTGGCTCTTGCTCATGCCACAATTGCACTGCTTTTGTACAAGCATTGGTATCTTGGCTTGATTGTGTTTAGCGTAGCAGTTTCAGTGAAGATGAATG
TGCTTTTATATGCACCAGCTTTGTTATTATTGATGTTGAAGGGAATGAGTACAAGAGGAGTGCTCTCTGCCTTGTCTGCTGCAGCATTAGTGCAGGTTCTATTTGGCTTTCCATTTCTTATTTCATATCCTTTTGAATATATATCAAAAGCCTTCGACCTTGGGCGTGTCTTTATCCATTTCTGGTCTGTGAACTTCAAA
TTTGTTCCAGAGTTGGTTTTCACATCGAAAGTATTTGCTATTGCTTTGCTTGCTACTCACCTCCTACTGCTTTTCTTCTTTGCTCAGAACAGATGGTGCAGGCATGAAGGAGGCATTCTTCCAGCCGTGGGTTTGCAATGTCCTAATGTAGAGTACAAGTACACAGCTTTTATTCGAAAGCTTTTCTCCAATGTTTTCTT
TGATGATTCAAGGTCTCGTACTTTAGAAGCAGAACATATCACAACTGTCATGTTCGTGGGAAACTTCATTGGCATCATATGTGCCCGTTCATTGCATTACCAGTTTTATTCTTGGTACTTCTATAGCTTGCCATTTCTTTTATGGAAGGCACCCTTTCCAACTCCTTTGAGGTTACTTTTATTTGCAGGGGTGGAAGTTT
GCTGGAACATATATCCTTCAACTGCCGCTTCGTCTTTTATATTGCTCATATTCCATTCAATAATTTTGTGGGGACTGTGGATTGCACCCTCAGAGTATCCTTACATGCGGCAGGAAAAGGCTGAAAAAGTAGCTTAACAAACAACGTTAGCAATTTATATTTATATTTACTTTAATTTCATTGTGTAGCATATTTACAGG
TTGGCACATTAACAAGCCAAAATGTGATCTTACATTCATGTCTAAGCAAGATGTTCATAAAATGTGGTTATTGAAAATAGTCTAGGACACCATGGTTTGTCTTGAGAGAATCTGTTCAGCTGCATAATTTCTTCTGTACTTGATAAAACTTGAAAAAGTGGCCATTACTTACGGTGCTACACCCTACAAGCAAATATAGA
CTGGACTCTGAGCAGGTTACTAATATTGTATGACATCATTTCCTCTTTTCCCTGCGGTATTTGGAAGTGATCCTGTGATGTAAACATATTTTTTTGGTAGAAATGCAATCCGTAAATGACGGACTTATAACCCATTTGC
>TRINITY_DN41860_c1_g4_i2 from sample A6 / Example unspliced isoform:AGGGAATGAGTACAAGAGGAGTGCTCTCTGCCTTGTCTGCTGCAGCATTAGTGCAGGTTCTATTTGGCTTTCCATTTCTTATTTCATATCCTTTTGAATATATATCAAAAGCCTTCGACCTTGGGCGTGTCTTTATCCATTTCTGGTCTGTGAACTTCAAATTTGTTCCAGAGTTGGTTTTCACATCGAAAGTATTTGCT
ATTGCTTTGCTTGCTACTCACCTCCTACTGCTTTTCTTCTTTGCTCAGAACAGATGGTGCAGGCATGAAGGAGGCATTCTTCCAGCCGTGGGTTTGCAATGTCCTAATGTAGAGTACAAGTACACAGCTTTTATTCGAAAGCTTTTCTCCAATGTTTTCTTTGATGATTCAAGGTCTCGTACTTTAGAAGCAGAACATAT
CACAACTGTCATGTTCGTGGGAAACTTCATTGGCATCATATGTGCCCGTTCATTGCATTACCAGTTTTATTCTTGgtagagcttatatatcagactatgcttcggcaataaaaggagatttaatgggatccatttctcagcatcttaaggcagcctcagGTACTTCTATAGCTTGCCATTTCTTTTATGGAAGGCACCCT
TTCCAACTCCTTTGAGGTTACTTTTATTTGCAGGGGTGGAAGTTTGCTGGAACATATATCCTTCAACTGCCGCTTCGTCTTTTATATTGCTCATATTCCATTCAATAATTTTGTGGGGACTGTGGATTGCACCCTCAGAGTATCCTTACATGCGGCAGGAAAAGGCTGAAAAAGTAGCTTAACAAACAACGTTAGCAATT
TATATTTATATTTACTTTAATTTCATTGTGTAGCATATTTACAGGTTGGCACATTAACAAGCCAAAATGTGATCTTACATTCATGTCTAAGCAAGATGTTCATAAAATGTGGTTATTGAAAATAGTCTAGGACACCATGGTTTGTCTTGAGAGAATCTGTTCAGCTGCATAATTTCTTCTGTACTTGATAAAACTTGAAA
AAGTGGCCATTACTTACGGTGCTACACCCTACAAGCAAATATAGACTGGACTCTGAGCAGGTTACTAATATTGTATGACATCATTTCCTCTTTTCCCTGCGGTATTTGGAAGTGATCCTGTGATGTAAACATATTTTTTTGGTAGAAATGCAATCCGTAAATGACGGACTTATAACCCATTTGC
Intron 2 GTAAACTTCT ... TCTTTTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.91 | 10.6 | 14 | 29 |
| A2 | 55.99 | 19.3 | 14 | 35 |
| A3 | 54.75 | 22.1 | 22.3 | 30 |
| A4 | 68.85 | 7.3 | 18 | 14 |
| A5 | 58.14 | 18 | 24 | 26 |
| A6 | 54.4 | 42.8 | 40 | 62 |
| A7 | 62.19 | 38 | 56 | 69 |
| A8 | 57.97 | 20.2 | 26.6 | 29 |
| A9 | 61.82 | 29.2 | 47.3 | 47 |
| A10 | 55.98 | 47.2 | 53.9 | 66 |
>TRINITY_DN107169_c0_g1_i4 from sample A2 / Example spliced isoformAAATATAGTTCGAACATTGGCCGCTCTCTGGGTCGTCATTTTGTTACGGGGTGTGGAGTATTCACACGATGACGAAATTGGCAGATGAGACGCCATCATCATCGACATCGCAGGGAATTGGGAATAAGAATGCACGTTTTGTGACATACTGCATTCTGCTACTCCTACTCGTCGACAGTCTGTTAACTTGTGCCATTATC
GCATATGTTCCATATACTAAGATCGATTGGGATGCTTACATGTCACAGGTGAGGGGCTTCATAGGAGGGGAGAGGAATTATGCAGAGCTGAGAGGGGACACAGGACCTTTAGTCTACCCTGCAGGATTCCTCTATTTTTACACGGCCATTCAGTTTTTCACGGGGGGTGCAGTCTTCCCCGCCCAGGTTATCTTTGGTAT
TTTGTATATCATAAACCTTGGAATCATTTTGCTGATCTACAAAAAGTCTAATTTGCTTCCATGGTGGGCCCTTTGCTTACTTTGTTTGTCAAAAAGAGTTCATTCAATATTCGTATTGCGTCTATTTAACGATTGTGTGGCTGTGGCTCTTGCTCATGCCACAATTGCACTGCTTTTGTACAAGCATTGGTATCTTGGCT
TGATTGTGTTTAGCGTAGCAGTTTCAGTGAAGATGAATGTGCTTTTATATGCACCAGCTTTGTTATTATTGATGTTGAAGGGAATGAGTACAAGAGGAGTGCTCTCTGCCTTGTCTGCTGCAGCATTAGTGCAGGTTCTATTTGGCTTTCCATTTCTTATTTCATATCCTTTTGAATATATATCAAAAGCCTTCGACCTT
GGGCGTGTCTTTATCCATTTCTGGTCTGTGAACTTCAAATTTGTTCCAGAGTTGGTTTTCACATCGAAAGTATTTGCTATTGCTTTGCTTGCTACTCACCTCCTACTGCTTTTCTTCTTTGCTCAGAACAGATGGTGCAGGCATGAAGGAGGCATTCTTCCAGCCGTGGGTTTGCAATGTCCTAATGTAGAGTACAAGTA
CACAGCTTTTATTCGAAAGCTTTTCTCCAATGTTTTCTTTGATGATTCAACGTCTCGTACTTTAGAAGCAGAACATATCACAACTGTCATGTTCGTGGGAAACTTCATTGGCATCATATGTGCCCGTTCATTGCATTACCAGTTTTATTCTTGGTACTTCTATAGCTTGCCATTTCTTTTATGGAAGGCACCCTTTCCAA
CTCCTTTGAGGTTACTTTTATTTGCAGGGGTGGAAGTTTGCTGGAACATATATCCTTCAACTGCCGCTTCGTCTTTTATATTGCTCATATTCCATTCAATAATTTTGTGGGGACTGTGGATTGCACCCTCAGAGTATCCTTACATGCGGCAGGAAAAGGCTGAAAAAGTAGCTTAACAAACAACGTTAGCAATTTATATT
TATATTTACTTTAATTTCATTGTGTAGCATATTTACAGGTTGGC
>TRINITY_DN107169_c0_g1_i3 from sample A2 / Example unspliced isoform:AAATATAGTTCGAACATTGGCCGCTCTCTGGGTCGTCATTTTGTTACGGGGTGTGGAGTATTCACAgtaaacttctatgccctgtgcttcaaaatatgttatacacagttacattcaaaacatttttaaaacttcagcagacagatgaatgagtcgtatgcgaggaggatgccattcgttcactgattttcttttccaac
gattgattctcttttccagCGATGACGAAATTGGCAGATGAGACGCCATCATCATCGACATCGCAGGGAATTGGGAATAAGAATGCACGTTTTGTGACATACTGCATTCTGCTACTCCTACTCGTCGACAGTCTGTTAACTTGTGCCATTATCGCATATGTTCCATATACTAAGATCGATTGGGATGCTTACATGTCACA
GGTGAGGGGCTTCATAGGAGGGGAGAGGAATTATGCAGAGCTGAGAGGGGACACAGGACCTTTAGTCTACCCTGCAGGATTCCTCTATTTTTACACGGCCATTCAGTTTTTCACGGGGGGTGCAGTCTTCCCCGCCCAGGTTATCTTTGGTATTTTGTATATCATAAACCTTGGAATCATTTTGCTGATCTACAAAAAGT
CTAATTTGCTTCCATGGTGGGCCCTTTGCTTACTTTGTTTGTCAAAAAGAGTTCATTCAATATTCGTATTGCGTCTATTTAACGATTGTGTGGCTGTGGCTCTTGCTCATGCCACAATTGCACTGCTTTTGTACAAGCATTGGTATCTTGGCTTGATTGTGTTTAGCGTAGCAGTTTCAGTGAAGATGAATGTGCTTTTA
TATGCACCAGCTTTGTTATTATTGATGTTGAAGGGAATGAGTACAAGAGGAGTGCTCTCTGCCTTGTCTGCTGCAGCATTAGTGCAGGTTCTATTTGGCTTTCCATTTCTTATTTCATATCCTTTTGAATATATATCAAAAGCCTTCGACCTTGGGCGTGTCTTTATCCATTTCTGGTCTGTGAACTTCAAATTTGTTCC
AGAGTTGGTTTTCACATCGAAAGTATTTGCTATTGCTTTGCTTGCTACTCACCTCCTACTGCTTTTCTTCTTTGCTCAGAACAGATGGTGCAGGCATGAAGGAGGCATTCTTCCAGCCGTGGGTTTGCAATGTCCTAATGTAGAGTACAAGTACACAGCTTTTATTCGAAAGCTTTTCTCCAATGTTTTCTTTGATGATT
CAACGTCTCGTACTTTAGAAGCAGAACATATCACAACTGTCATGTTCGTGGGAAACTTCATTGGCATCATATGTGCCCGTTCATTGCATTACCAGTTTTATTCTTGGTACTTCTATAGCTTGCCATTTCTTTTATGGAAGGCACCCTTTCCAACTCCTTTGAGGTTACTTTTATTTGCAGGGGTGGAAGTTTGCTGGAAC
ATATATCCTTCAACTGCCGCTTCGTCTTTTATATTGCTCATATTCCATTCAATAATTTTGTGGGGACTGTGGATTGCACCCTCAGAGTATCCTTACATGCGGCAGGAAAAGGCTGAAAAAGTAGCTTAACAAACAACGTTAGCAATTTATATTTATATTTACTTTAATTTCATTGTGTAGCATATTTACAGGTTGGC
Intron 3 GTTCTATTTG ... CTTTGCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 69.57 | 7 | 9 | 23 |
| A2 | 90.48 | 1 | 10 | 9 |
| A3 | 85.19 | 4 | 17 | 29 |
| A4 | 76.19 | 5 | 13 | 19 |
| A5 | 63.64 | 4 | 4 | 10 |
| A6 | 87.27 | 14 | 89 | 103 |
| A7 | 75.53 | 23 | 75 | 67 |
| A8 | 73.66 | 27 | 73 | 78 |
| A9 | 81.54 | 12 | 43 | 63 |
| A10 | 90.29 | 5 | 50 | 43 |
>TRINITY_DN35545_c0_g1_i4 from sample A8 / Example spliced isoformGCATTTTTGATAGCCCCTCCATGTATAAATATAGTTCGAACATTGGCCGCTCTCTGGGTCGTCATTTTGTTACGGGGTGTGGAGTATTCACAGTAAACTTCTATGCCCTGTGCTTCAAAATATGTTATACACAGTTACATTCAAAACATTTTTAAAACTTCAGCAGACAGATGAATGAGTCGTATGCGAGGAGGATGCCA
TTCGTTCACTGATTTTCTTTTCCAACGATTGATTCTCTTTTCCAGCGATGACGAAATTGGCAGATGAGACGCCATCATCATCGACATCGCAGGGAATTGGGAATAAGAATGCACGTTTTGTGACATACTGCATTCTGCTACTCCTACTCGTCGACAGTCTGTTAACTTGTGCCATTATCGCATATGTTCCATATACTAAG
ATCGATTGGGATGCTTACATGTCACAGGTGAGGGGCTTCATAGGAGGGGAGAGGAATTATGCAGAGCTGAGAGGGGACACAGGACCTTTAGTCTACCCTGCAGGATTCCTCTATTTTTACACGGCCATTCAGTTTTTCACGGGGGGTGCAGTCTTCCCCGCCCAGGTTATCTTTGGTATTTTGTATATCATAAACCTTGG
AATCATTTTGCTGATCTACAAAAAGTCTAATTTGCTTCCATGGTGGGCCCTTTGCTTACTTTGTTTGTCAAAAAGAGTTCATTCAATATTCGTATTGCGTCTATTTAACGATTGTGTGGCTGTGGCTCTTGCTCATGCCACAATTGCACTGCTTTTGTACAAGCATTGGTATCTTGGCTTGATTGTGTTTAGCAGTTTCA
GTGAAGATGAATGTGCTTTTATATGCACCAGCTTTGTTATTATTGATGTTGAAGGGAATGAGTACAAGAGGAGTGCTCTCTGCCTTGTCTGCTGCAGCATTAGTGCAGAACAGATGGTGCAGGCATGAAGGAGGCATTCTTCCAGCCGTGGGTTTGCAATGTCCTAATGTAGAGTACAAGTACACAGCTTTTATTCGAAA
GCTTTTCTCCAATGTTTTCTTTGATGATTCAAGGTCTCGTACTTTAGAAGCAGAACATATCACAACTGTCATGTTCGTGGGAAACTTCATTGGCATCATATGTGCCCGTTCATTGCATTACCAGTTTTATTCTTGGTACTTCTATAGCTTGCCATTTCTTTTATGGAAGGCACCCTTTCCAACTCCTTTGAGGTTACTTT
TATTTGCAGGGGTGGAAGTTTGCTGGAACATATATCCTTCAACTGCCGCTTCGTCTTTTATATTGCTCATATTCCATTCAATAATTTTGTGGGGACTGTGGATTGCACCCTCAGAGTATCCTTACATGCGGCAGGAAAAGGCTGAAAAAGTAGCTTAACAAACAACGTTAGCAATTTATATTTATATTTACTTTAATTTC
ATTGTGTAGCATATTTACAGGTTGGCACATTAACAAGCCAAAATGTGATCTTACATTCATGTCTAAGCAAGATGTTCATAAAATGTGGTTATTGAAAATAGTCTAGGACACCATGGTTTGTCTTGAGAGAATCTGTTCAGCTGCATAATTTCTTCTGTACTTGATAAAACTTGAAAAAGTGGCCATTACTTACGGTGCTA
CACCCTACAAGCAAATATAGACTGGACTCTGAGCAGGTTACTAATATTGTATGACATCATTTCCTCTTTTCCCTGCGGTATTTGGAAGTGATCCTGTGATGTAAACATATTTTTTTGGTAGAAATGCAATCCGTAAATGACGGACTTATAACCCAAC
>TRINITY_DN35545_c0_g1_i3 from sample A8 / Example unspliced isoform:GCATTTTTGATAGCCCCTCCATGTATAAATATAGTTCGAACATTGGCCGCTCTCTGGGTCGTCATTTTGTTACGGGGTGTGGAGTATTCACAGTAAACTTCTATGCCCTGTGCTTCAAAATATGTTATACACAGTTACATTCAAAACATTTTTAAAACTTCAGCAGACAGATGAATGAGTCGTATGCGAGGAGGATGCCA
TTCGTTCACTGATTTTCTTTTCCAACGATTGATTCTCTTTTCCAGCGATGACGAAATTGGCAGATGAGACGCCATCATCATCGACATCGCAGGGAATTGGGAATAAGAATGCACGTTTTGTGACATACTGCATTCTGCTACTCCTACTCGTCGACAGTCTGTTAACTTGTGCCATTATCGCATATGTTCCATATACTAAG
ATCGATTGGGATGCTTACATGTCACAGGTGAGGGGCTTCATAGGAGGGGAGAGGAATTATGCAGAGCTGAGAGGGGACACAGGACCTTTAGTCTACCCTGCAGGATTCCTCTATTTTTACACGGCCATTCAGTTTTTCACGGGGGGTGCAGTCTTCCCCGCCCAGGTTATCTTTGGTATTTTGTATATCATAAACCTTGG
AATCATTTTGCTGATCTACAAAAAGTCTAATTTGCTTCCATGGTGGGCCCTTTGCTTACTTTGTTTGTCAAAAAGAGTTCATTCAATATTCGTATTGCGTCTATTTAACGATTGTGTGGCTGTGGCTCTTGCTCATGCCACAATTGCACTGCTTTTGTACAAGCATTGGTATCTTGGCTTGATTGTGTTTAGCGTAGCAG
TTTCAGTGAAGATGAATGTGCTTTTATATGCACCAGCTTTGTTATTATTGATGTTGAAGGGAATGAGTACAAGAGGAGTGCTCTCTGCCTTGTCTGCTGCAGCATTAGTGCAGgttctatttggctttccatttcttatttcatatccttttgaatatatatcaaaagccttcgaccttgggcgtgtctttatccatttc
tggtctgtgaacttcaaatttgttccagagttggttttcacatcgaaagtatttgctattgctttgcttgctactcacctcctactgcttttcttctttgctcagAACAGATGGTGCAGGCATGAAGGAGGCATTCTTCCAGCCGTGGGTTTGCAATGTCCTAATGTAGAGTACAAGTACACAGCTTTTATTCGAAAGCT
TTTCTCCAATGTTTTCTTTGATGATTCAAGGTCTCGTACTTTAGAAGCAGAACATATCACAACTGTCATGTTCGTGGGAAACTTCATTGGCATCATATGTGCCCGTTCATTGCATTACCAGTTTTATTCTTGGTACTTCTATAGCTTGCCATTTCTTTTATGGAAGGCACCCTTTCCAACTCCTTTGAGGTTACTTTTAT
TTGCAGGGGTGGAAGTTTGCTGGAACATATATCCTTCAACTGCCGCTTCGTCTTTTATATTGCTCATATTCCATTCAATAATTTTGTGGGGACTGTGGATTGCACCCTCAGAGTATCCTTACATGCGGCAGGAAAAGGCTGAAAAAGTAGCTTAACAAACAACGTTAGCAATTTATATTTATATTTACTTTAATTTCATT
GTGTAGCATATTTACAGGTTGGCACATTAACAAGCCAAAATGTGATCTTACATTCATGTCTAAGCAAGATGTTCATAAAATGTGGTTATTGAAAATAGTCTAGGACACCATGGTTTGTCTTGAGAGAATCTGTTCAGCTGCATAATTTCTTCTGTACTTGATAAAACTTGAAAAAGTGGCCATTACTTACGGTGCTACAC
CCTACAAGCAAATATAGACTGGACTCTGAGCAGGTTACTAATATTGTATGACATCATTTCCTCTTTTCCCTGCGGTATTTGGAAGTGATCCTGTGATGTAAACATATTTTTTTGGTAGAAATGCAATCCGTAAATGACGGACTTATAACCCAAC