sp|Q5XVC4|MDP60_ARATH ----> Microtubule-destabilizing protein 60
Intron 1 GTTACTATGT ... AACTGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 24.32 | 28 | 3 | 9 |
| A2 | 0 | 15 | 0 | 0 |
| A3 | 30 | 21 | 0 | 9 |
| A4 | 23.08 | 20 | 0 | 6 |
| A5 | 25 | 6 | 0 | 2 |
| A6 | 25.35 | 53 | 0 | 18 |
| A7 | 19.23 | 126 | 1 | 30 |
| A8 | 24.68 | 116 | 0 | 38 |
| A9 | 24.44 | 102 | 0 | 33 |
| A10 | 19.38 | 129 | 0 | 31 |
>TRINITY_DN117257_c0_g1_i8 from sample A1 / Example spliced isoformCTAAATGACCGTTGCAGAGAGATTCACAATTTGAAAGCCTAACGAGCCAATAAGGCCAAGGCCATCAATCAATACAATACATTAGTGTAGAATTCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGGCAGTCCCAGTC
CTCGTTTCAAGAGTCCTCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCTCCTTCTGCTGCCATTGCTGCAGAAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGTTGGCTATTGCT
TCTGGAATTCATTCATGTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAAGGCTCAACCCCGCAAATTCCTTGTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGTGTTGCTTCCAA
GGAATTGAGGGCTTCTCAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAGAAGAAGATACAGGAAGAGATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTTTTGGAAACATG
AAAGAAAACGATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGTATTTTAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACAAAATTCATTGT
TATGAAGATGGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTGTGCCTTCCAGA
CCCTGAAACTGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCGGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTTTGGTGACGTCG
AGAGGTCAAATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCTGAAGATACACCACCTTCTGGTGTGAACAGCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAAC
GGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGTTTGATAAAGCC
CCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCCGCGTGCTC
AACCTATGCCCTTCTTTGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAAGAATAAGTTCCAGATTAATGGAAGTTATCTCTGTACAACTACATTATTTAGGCTGGAGAA
AAATAAGTTTTCTTTTGAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCTCTGGTCACTTTGTGTTTTGGTTCACAAAGCCAAGCAATATAGTACTAGTTTTGTGATTACAGGCATCAATTCCCTGTGAAAAGAAGATAGAGAGCATTCATTGTGCCATGGAATGATGCTTGTTCTGTGACCTGTCTG
CTCATGCAGACAAAGTCAACAATGAAGTTTTTCATTTATTTGTATTTTTAGTCATTTGTTTATTAACAAATGTCAAGATAATATATGTGAGCC
>TRINITY_DN117257_c0_g1_i9 from sample A1 / Example unspliced isoform:TCAGGTGGAAGAAGCGGAAGCAGgttactatgtccatttctctctatgttctattcagtgttgtccttgcattagcttatttacttgttggtgtcagtccttttctgtaatatctgaaaacataaatttatttgtttgttttaactgtgcagTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGG
ACAAGGATCTCTAGGGAGAAACGGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATG
AGCCAGAGTGTTTGATAAAGCCCCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGA
AAAGAGTTGGTTCCGCGTGCTCAACCTATGCCCTTCTTTGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAAGAATAAGTTCCAGATTAATGGAAGTTATCTCTGTACAA
CTACATTATTTAGGCTGGAGAAAAATAAGTTTTCTTTTGAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCTCTGGTCACTTTGTGTTTTGGTTCACAAAGCCAAGCAATATAGTACTAGTTTTGTGATTACAGGCATCAATTCCCTGTGAAAAGAAGATAGAGAGCATTCATTGTGCCATGGAATGA
TGCTTGTTCTGTGACCTGTCTGCTCATGCAGACAAAGTCAACAATGAAGTTTTTCATTTATTTGTATTTTTAGTCATTTGTTTATTAACAAATGTCAAGATAATATATGTGAGCC
Intron 2 GTATGCATGA ... ATTTCAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 43.86 | 10.3 | 6.2 | 8 |
| A2 | 19.81 | 16.2 | 1.7 | 4 |
| A3 | 8.17 | 13 | 1.6 | 0.9 |
| A4 | 40.74 | 6.7 | 2.4 | 4 |
| A5 | 68.89 | 1.6 | 2.2 | 3 |
| A6 | 12.84 | 41.2 | 2.7 | 6 |
| A7 | 10.7 | 115.1 | 8.7 | 15.3 |
| A8 | 10.87 | 179 | 15.4 | 24 |
| A9 | 6.28 | 89.7 | 9.9 | 6.7 |
| A10 | 9.42 | 125.3 | 12.1 | 13.2 |
>TRINITY_DN98108_c0_g1_i2 from sample A4 / Example spliced isoformGACAGGTTTGCCTAAATGACCGTTGCAGAGAGATTCACAATTTGAAAGCCTAACGAGCCAATAAGGCCAAGGCCATCAATCAATACAATACATTAGTGTAGAATTCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGG
CAGTCCCAGTCCTCGTTTCAAGAGTCCTCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCTCCTTCTGCTGCCATTGCTGCAGAAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGT
TGGCTATTGCTTCTGGAATTCATTCATGTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAAGGCTCAACCCCGCAAATTCCTTGTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGT
GTTGCTTCCAAGGAATTGAGGGCTTCTCAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAGAAGAAGATACAGGAAGAGATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTT
TTGGAAACATGAAAGAAAACGATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGTATTTAAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACA
AAATTCATTGTTATGAAGATGGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTG
TGCCTTCCAGACCCTGAAACTGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCTGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTT
TGGTGACGTCGAGAGGTCAAATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCCGAAGATACACCACCTTCTGGTGTGAACAGCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCTGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATCTC
TAGGGAGAAACGGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGT
TTGATAAAGCCCCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGT
TCCGCGTGCTCAACCTATGCCCTTCTTTGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAATAATAAGTTCCAGATTAATGGAAGTTATCTCTGTACAAC
>TRINITY_DN98108_c0_g1_i1 from sample A4 / Example unspliced isoform:AGATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTTTTGGAAACATGAAAGAAAACGATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAA
ATGGGTATTTAAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACAAAATTCATTGTTATGAAGATGGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCT
AGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTGTGCCTTCCAGACCCTGAAACTGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCG
AGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCTGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTTTGGTGACGTCGAGAGGTCAAATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCCGAAGATACACCACCTTCTGGTGTGAACA
GCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCTGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAACGGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAG
AGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGTTTGATAAAGCCCCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTAT
CGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGgtatgcatgattgtgttgttttgttgttgtgtatcgtattttgacacctatagattagtgtagtgatgcatgcacttgacaactgatttcaacagTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCC
GCGTGCTCAACCTATGCCCTTCTTTGACCGTCCTTTCATTCCTAAAAGGTATGGCTTCTTATAGTACCAAGCAAGATGTGTGTGTTTCTGTAAACAAGATGTCTAAGAGTCTCATGTGATTGTGACTTG
Intron 3 GTAAAATGCA ... CAACTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.98 | 14 | 2.4 | 6 |
| A2 | 22.58 | 12 | 3 | 4 |
| A3 | 14.05 | 17 | 2.9 | 3 |
| A4 | 21.93 | 16 | 8.2 | 1 |
| A5 | 16.52 | 11 | 0.4 | 4 |
| A6 | 16.8 | 44 | 2.9 | 15 |
| A7 | 19.65 | 118 | 21.8 | 37 |
| A8 | 18.33 | 98 | 17 | 28 |
| A9 | 16.27 | 81 | 19.6 | 13 |
| A10 | 18.94 | 114 | 28.5 | 26 |
>TRINITY_DN44001_c0_g5_i6 from sample A8 / Example spliced isoformATACAATACATTAGTGTAGAATTCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGGCAGTCCCAGTCCTCGTTTCAAGAGTCCTCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCT
CCTTCTGCTGCCATTGCTGCAGAAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGTTGGCTATTGCTTCTGGAATTCATTCATGTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAA
GGCTCAACCCCGCAAATTCCTTGTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGTGTTGCTTCCAAGGAATTGAGGGCTTCTCAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAG
AAGAAGATACAGGAAGAGGTAAGGACTGCAAAACCCAAGTCTCTATTGTGAATTTTGAGATTTCAAACGATGATAAACGTCATGAATTTGAATGCAATGTAGATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGG
TTTTGGAAACATGAAAGAAAACGATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGTATTTTAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGA
CAAAATTCATTGTTATGAAGATGGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGT
TGTGCCTTCCAGACCCTGAAACTGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCGGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGC
TTTGGTGACGTCGAGAGGTCAAATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCCGAAGATACACCACCTTCTGGTGTGAACAGCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATC
TCTAGGGAGAAACGGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGG
TTACTACTGAATTAAAGATATATGTTTACTGGCATCCAAATTTTGTATATTAGTATTGATAACTGATCTCTCAACATTAGTCTGGAATCTGAATCTTTTGTATGTGTTAAAATGACAGTGTTTGATAAAGCCCCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTG
CTGAATTTGATCAAATTGTAAGGCATAATTTTTGTTTCTTTGTATGAGTTTTAATGCCCTTTAAATTTACATAGCCTTTAATCATCTTCTTCTGTGGTGAATCAAATAGATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGA
GAAAAGAGTTGGTTCCGCGTGCTCAACCCATGCCCTTCTTTGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAATAATAAGTTCCAGATTAATGGAAGTTATCTCTGTAC
AACTACATTATTTAGGCTGGAGAAAAATAAGTTTTCTTTTGAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCTCTGGTCACTTTGTGTTTGGTTCACAAAGCCAAGCAATATAGTACTAGTTTTGTGATTACAGGTATCAATTCCCTGTGAAAAGAAGATAGAGAGCATTCATTGTGCCATGGAATG
ATGCTTGTTCTGTGACCTGTCTGCTCATGCAGACAAAGTCAACAATGAAGTTTTTCATTTATTTGTATTTTTAGTCATTTGTTTATTAACAAATGTCAAGATAATATATGTGAGCTTTTTCAAGCAGTATTTTCTTATATTTCAGGCCTGATGTAATTATAAGGCTTGATTTGGAAGTTGTTTTTCTTTTCAATTAGATG
TAGGCTCTAGCCATGAGAATCACAAGAGATGGGAGAGGTTGGTGGTTAATTACAGAAGTTTGTGTGGATCAAGGTAACTTTAAGGGACTATTATTAAACGAGTAGAACTGTTTGG
>TRINITY_DN44001_c0_g5_i7 from sample A8 / Example unspliced isoform:CAGAAGAAGAGGCACCAAAGGGGTATGGTGATTTCTCCTCTTCCCCTGTTCTGTTGGTATGTTCGTGTGTCTGTGCATGAATGCCAGTATCCATGGGTGCAGTCATGCCAGCGTTAATGCACTGGATCCTATCAGAACTCTAAATTTAAGAGGACTTGGGATAGTGTAGTGTTATAGATTCCCTAAGATCAGCATAAAAT
TCTTGTTGGTGGGTGAGGGGCCGACCTTGAGAGATCATTGGCAGTAAAGTTATTTTAATATCAAAGTGTGAAAAAACCCAGTGGTTTTGCATGATTTGTCCAAAATTTTCCCAAGCCTTGGCATTCTGCAATGTTATCTTGGCACACTCTCCTCCCATGACTCATAGTTTTACTGTTTGTGCCTCAGTTCGTCTGAAGAT
GTGAACATGATGTGGCCTCTGACAATCGTAACATTGTGTTTCTTTTCAGAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAACGGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGgtaaaatgcaaacacaaagctctgcaaacataaagcatgtagcttt
atgttttgttactttatcacttcttgcttaaaaacattcacatttatttttaattgtaggcatgtactgtatcagaggagatcattactttcctcccctttcattctaaccccatctgtggtttagaacttgcttgactgcccctataattgttttgtatgatttccttgtaaggctccttagaactagatttccacatt
tgatctgttttttcactgtaaacagttggacagttgtttttgactaacagatattttattccttttgttacttatttgacacaatatttataattgatcctgaccttaatctaaatatacgctttactcatagcatgcataacattatttaaggtaatgtgaaggaaactacagtaagctctgagtcacccagttacatt
gaccattcgcatggaattgggttgattgttgcatgtgtttgtcctaatttaatagggatgaggcagaatcttttaaacacctatgcttataaccagatcaacaatctagcaatgtttgaatttaatggtatttagtagtgttcactgtgcatgtcccatactcttactcatagcctgtaatgcatgccctgcagccttgc
tgataatcttgttattgatttctctttgcctggaaaaaaatgcatttacctttccatctctgaatttaaccaaaatgcaataaatttccatgatgtaatgagctttaacaacttgcagCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAA
TTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGGTTACTACTGAATTAAAGATATATGTTTACTGGCATCCAAATTTTGTATATTAGTATTGATAACTGATCTCTCAACATTAGTCTGGAATCTGAATCTTTTGTATGTGTTAAAATGACAGTGTTTGATAAAGCCCCCTGTGAAAGAAAGCACTAAGCCAATGG
ATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTGTAAGGCATAATTTTTGTTTCTTTGTATGAGTTTTAATGCCCTTTAAATTTACATAGCCTTTAATCATCTTCTTCTGTGGTGAATCAAATAGATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGAC
TGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCCGCGTGCTCAACCCATGCCCTTCTTTGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTAT
CAATAATAAGTTCCAGATTAATGGAAGTTATCTCTGTACAACTACATTATTTAGGCTGGAGAAAAATAAGTTTTCTTTTGAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCTCTGGTCACTTTGTGTTTTGGTTCACAAAGCCAAGCAATATAGTACTAGTTTTGTGATTACAGGTATCAATTCCCT
GTGAAAAGAAGATAGAGAGCATTCATTGTGCCATGGAATGATGCTTGTTCTGTGACCTGTCTGCTCATGCAGACAAAGTCAACAATGAAGTTTTTCATTTATTTGTATTTTTAGTCATTTGTTTATTAACAAATGTCAAGATAATATATGTAAGCTTTCAAGCAGTATTTTCTTATAATTCAGGCCTGATGTAATTATAA
AGCTTGAATTGGAAGTTGTTTTTCTTTTCAATTAGATGTAGGCTCTAGCCATGAGAATCACAAGAGATGGGAGAGGTTGGTGGTTAATTACAGAAGTTTGTGTGGATCAAGGTAACTTTAAGGGACTATTATTAAACGAGTAGAACTGTTTGG
Intron 4 GTAAGGCATA ... AATCAAATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 7.99 | 18.6 | 6.5 | 1.9 |
| A2 | 2.56 | 13.9 | 1.5 | 0.4 |
| A3 | 3.45 | 24.6 | 3 | 1 |
| A4 | 0 | 14 | 1.5 | 0 |
| A5 | 0 | 5.9 | 0.8 | 0 |
| A6 | 4.74 | 47.1 | 3.1 | 2.8 |
| A7 | 5.83 | 122.4 | 15.5 | 8.5 |
| A8 | 7.96 | 186.4 | 26.9 | 17.9 |
| A9 | 4.52 | 113.9 | 8.6 | 6 |
| A10 | 3.43 | 150.6 | 10.4 | 6 |
>TRINITY_DN117257_c0_g1_i8 from sample A1 / Example spliced isoformCTAAATGACCGTTGCAGAGAGATTCACAATTTGAAAGCCTAACGAGCCAATAAGGCCAAGGCCATCAATCAATACAATACATTAGTGTAGAATTCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGGCAGTCCCAGTC
CTCGTTTCAAGAGTCCTCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCTCCTTCTGCTGCCATTGCTGCAGAAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGTTGGCTATTGCT
TCTGGAATTCATTCATGTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAAGGCTCAACCCCGCAAATTCCTTGTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGTGTTGCTTCCAA
GGAATTGAGGGCTTCTCAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAGAAGAAGATACAGGAAGAGATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTTTTGGAAACATG
AAAGAAAACGATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGTATTTTAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACAAAATTCATTGT
TATGAAGATGGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTGTGCCTTCCAGA
CCCTGAAACTGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCGGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTTTGGTGACGTCG
AGAGGTCAAATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCTGAAGATACACCACCTTCTGGTGTGAACAGCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAAC
GGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGTTTGATAAAGCC
CCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCCGCGTGCTC
AACCTATGCCCTTCTTTGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAAGAATAAGTTCCAGATTAATGGAAGTTATCTCTGTACAACTACATTATTTAGGCTGGAGAA
AAATAAGTTTTCTTTTGAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCTCTGGTCACTTTGTGTTTTGGTTCACAAAGCCAAGCAATATAGTACTAGTTTTGTGATTACAGGCATCAATTCCCTGTGAAAAGAAGATAGAGAGCATTCATTGTGCCATGGAATGATGCTTGTTCTGTGACCTGTCTG
CTCATGCAGACAAAGTCAACAATGAAGTTTTTCATTTATTTGTATTTTTAGTCATTTGTTTATTAACAAATGTCAAGATAATATATGTGAGCC
>TRINITY_DN117257_c0_g1_i1 from sample A1 / Example unspliced isoform:CTAAATGACCGTTGCAGAGAGATTCACAATTTGAAAGCCTAACGAGCCAATAAGGCCAAGGCCATCAATCAATACAATACATTAGTGTAGAATTCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGGCAGTCCCAGTC
CTCGTTTCAAGAGTCCTCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCTCCTTCTGCTGCCATTGCTGCAGAAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGTTGGCTATTGCT
TCTGGAATTCATTCATGTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAAGGCTCAACCCCGCAAATTCCTTGTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGTGTTGCTTCCAA
GGAATTGAGGGCTTCTCAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAGAAGAAGATACAGGAAGAGATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTTTTGGAAACATG
AAAGAAAACGATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGTATTTTAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACAAAATTCATTGT
TATGAAGATGGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTGTGCCTTCCAGA
CCCTGAAACTGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCGGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTTTGGTGACGTCG
AGAGGTCAAATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCTGAAGATACACCACCTTCTGGTGTGAACAGCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCTGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAAC
GGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGTTTGATAAAGCC
CCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTgtaaggcataatttttgtttctttgtatgagttttaatgccctttaaatttacatagcctttaataatcttcttctgtggtgaatcaaatagATCGCAGAAAGACTCAAAGCCAT
Intron 5 GTAAGGACTG ... TGCAATGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.81 | 32 | 6.4 | 10 |
| A2 | 32.46 | 16 | 12.8 | 7.7 |
| A3 | 33.07 | 16 | 8.4 | 7.9 |
| A4 | 28.57 | 20 | 5.5 | 8 |
| A5 | 34.74 | 9 | 7.5 | 4.8 |
| A6 | 54.14 | 5 | 2.8 | 5.9 |
| A7 | 33.84 | 54 | 30.4 | 27.6 |
| A8 | 26.92 | 38 | 24 | 14 |
| A9 | 49.78 | 22 | 16.2 | 21.8 |
| A10 | 42.5 | 47 | 40.4 | 34.9 |
>TRINITY_DN105939_c0_g1_i2 from sample A2 / Example spliced isoformTCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGGCAGTCCCAGTCCTCGTTTCAAGAGTCCTCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCTCCTTCTGCTGCCATTGCTGCAG
AAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGTTGGCTATTGCTTCTGGAATTCATTCATGTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAAGGCTCAACCCCGCAAATTCCTT
GTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGTGTTGCTTCCAAGGAATTGAGGGCTTCTCAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAGAAGAAGATACAGGAAGAGATGG
CAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTTTTGGAAACATGAAAGAAAACGATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGT
ATTTAAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACAAAATTCATTGTTATGAAGATGGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGG
ATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTGTGCCTTCCAGACCCTGAAACTGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTT
GAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCGGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTTTGGTGACGTCGAGAGGTCAAATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCCGAAGATACACCACCTTCTGGTGTGAACAGCGATA
CTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAACGGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAG
TTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGTTTGATAAAGCCCCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTATCGCAGA
AAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCCGCGTGCTCAACC
>TRINITY_DN105939_c0_g1_i1 from sample A2 / Example unspliced isoform:TCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGGCAGTCCCAGTCCTCGTTTCAAGAGTCCTCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCTCCTTCTGCTGCCATTGCTGCAG
AAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGTTGGCTATTGCTTCTGGAATTCATTCATGTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAAGGCTCAACCCCGCAAATTCCTT
GTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGTGTTGCTTCCAAGGAATTGAGGGCTTCTCAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAGAAGAAGATACAGGAAGAGgtaa
ggactgcaaaacccaagtctctattgtgaattttgagatttcaaacgatgataaacgtcatgaatttgaatgcaatgtagATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTTTTGGAAACATGAAAGAAAAC
GATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGTATTTAAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACAAAATTCATTGTTATGAAGAT
GGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTGTGCCTTCCAGACCCTGAAAC
TGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCGGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTTTGGTGACGTCGAGAGGTCAA
ATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCCGAAGATACACCACCTTCTGGTGTGAACAGCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAACGGTATGCAG
CAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGTTTGATAAAGCCCCCTGTGAA
AGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCCGCGTGCTCAACC
Intron 6 GTATGGTGAT ... TTCTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 11.82 | 24 | 4.7 | 3.2 |
| A2 | 15.56 | 12 | 1.3 | 2.3 |
| A3 | 3.18 | 18 | 2.7 | 0.7 |
| A4 | 23.33 | 23 | 3.3 | 7 |
| A5 | 3.7 | 5 | 0 | 0.2 |
| A6 | 2.42 | 41 | 6 | 1.1 |
| A7 | 11.4 | 130 | 15 | 17.7 |
| A8 | 9.93 | 97 | 7.7 | 11.2 |
| A9 | 7.29 | 109 | 8 | 9 |
| A10 | 10.18 | 119 | 10.7 | 14.1 |
>TRINITY_DN45296_c0_g1_i2 from sample A7 / Example spliced isoformGAGAGATTCACAATTTGAAAGCCTAACGAGCCAATAAGGCCAAGGCCATCAATCAATACAATACATTAGTGTAGAATTCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGGCAGTCCCAGTCCTCGTTTCAAGAGTCC
TCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCTCCTTCTGCTGCCATTGCTGCAGAAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGTTGGCTATTGCTTCTGGAATTCATTCAT
GTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAAGGCTCAACCCCGCAAATTCCTTGTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGTGTTGCTTCCAAGGAATTGAGGGCTTCT
CAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAGAAGAAGATACAGGAAGAGATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTTTTGGAAACATGAAAGAAAACGATGTGG
TGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGTATTTTAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACAAAATTCATTGTTATGAAGATGGTATTA
AGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTGTGCCTTCCAGACCCTGAAACTGTGGCG
ACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCTGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTTTGGTGACGTCGAGAGGTCAAATAGTGC
TTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCCGAAGATACACCACCTTCTGGTGTGAACAGCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAACGGTATGCAGCAATGGA
AGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGTTTGATAAAGCCCCCTGTGAAAGAAAGC
ACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCACATTATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCCGCGTGCTCAACCTATGCCCTTCTT
TGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAATAATAAGTTCCAGATTAATGGAAGTTATCTCTGTACAACTACATTATTTAGGCTGGAGAAAAATAAGTTTTCTTTT
GAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCTCTGGTCACTTTGTGTTTTGGTTCACAAAGCCAAGCAATATAGTACTAGTTTTGTGATTACAGGCATCAATTCCCTGTGAAAAGAAGATAGAGAGCATTCATTGTGCCATGGAATGATGCTTGTTCTGTGACCTGTCTGCTCATGCAGACAAAGT
CGACAATGAAGTTTTTCATTTATTTGTATTTTTAGTCATTTGTTTATTAACAAATGTCAAGATAATATATGTAAGCTTTCAAGCAGTATTTTCTTATAATTCAGGCCTGATGTAATTATAAAGCTTGAATTGGAAGTTGTTTTTCTTTTCAATTAGATGTAGGCTCTAGCCATGAGAATCACAAGAGATGGGAGAGGTTG
GTGGTTAATTACAGAAGTTTGTGTGGATCAAGGTAACTTTAAGGGACTATTATTAAACGAGTAGAACTGTTTGGTGA
>TRINITY_DN45296_c0_g1_i1 from sample A7 / Example unspliced isoform:ATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTTTTGGAAACATGAAAGAAAACGATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAAT
GGGTATTTTAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACAAAATTCATTGTTATGAAGATGGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAG
GAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTGTGCCTTCCAGACCCTGAAACTGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAG
AGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCTGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTTTGGTGACGTCGAGAGGTCAAATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCCGAAGATACACCACCTTCTGGTGTGAACAGC
GATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGgtatggtgatttctcctcttcccctgttctgttggtatgttcgtgtgtctgtgcatgaatgccagtatccatgggtgcagtcatgccagcgttaatgcactggatcctatcagaactctaaatttaag
aggacttgggatagtgtagtgttatagattccctaagatcagcataaaattcttgttggtgggtgaggggccgaccttgagagatcattggcagtaaagttattttaatatcaaagtgtgaaaaaacccagtggttttgcatgatttgtccaaaattttcccaagccttggcattctgcaatgttatcttggcacactct
cctcccatgactcatagttttactgtttgtgcctcagttcatctgaagatgtgaacatgatgtggcctctgacaatcgtaacattgtgtttcttttcagAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAACGGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAAC
GGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGTTTGATAAAGCCCCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTG
ATCGTGCTGAATTTGATCACATTATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCCGCGTGCTCAACCTATGCCCTTCTTTGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATC
CCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAATAATAAGTTCCAGATTAATGGAAGTTATCTCTGTACAACTACATTATTTAGGCTGGAGAAAAATAAGTTTTCTTTTGAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCT
CTGGTCACTTTGTGTTTTGGTTCACAAAGCCAAGCAATATAGTACTAGTTTTGTGATTACAGGCATCAATTCCCTGTGAAAAGAAGATAGAGAGCATTCATTGTGCCATGGAATGATGCTTGTTCTGTGACCTGTCTGCTCATGCAGACAAAGTCGACAATGAAGTTTTTCATTTATTTGTATTTTTAGTCATTTGTTTA
TTAACAAATGTCAAGATAATATATGTAAGCTTTCAAGCAGTATTTTCTTATAATTCAGGCCTGATGTAATTATAAAGCTTGAATTGGAAGTTGTTTTTCTTTTCAATTAGATGTAGGCTCTAGCCATGAGAATCACAAGAGATGGGAGAGGTTGGTGGTTAATTACAGAAGTTTGTGTGGATCAAGGTAACTTTAAGGGA
CTATTATTAAACGAGTAGAACTGTTTGGTGA
Intron 7 GTTACTACTG ... AAAATGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.78 | 16 | 0.9 | 4.8 |
| A2 | 7.11 | 11 | 2.6 | 1.1 |
| A3 | 7.84 | 12 | 0 | 1.3 |
| A4 | 7.62 | 10 | 0.9 | 1.1 |
| A5 | 6.15 | 10 | 1 | 0.8 |
| A6 | 10.34 | 40.7 | 8.7 | 5.2 |
| A7 | 14.33 | 105 | 28.7 | 18.4 |
| A8 | 11.7 | 118 | 27.4 | 16.7 |
| A9 | 5.71 | 96 | 19.9 | 6.3 |
| A10 | 14.82 | 120 | 32 | 22 |
>TRINITY_DN45296_c0_g1_i2 from sample A7 / Example spliced isoformGAGAGATTCACAATTTGAAAGCCTAACGAGCCAATAAGGCCAAGGCCATCAATCAATACAATACATTAGTGTAGAATTCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGGCAGTCCCAGTCCTCGTTTCAAGAGTCC
TCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCTCCTTCTGCTGCCATTGCTGCAGAAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGTTGGCTATTGCTTCTGGAATTCATTCAT
GTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAAGGCTCAACCCCGCAAATTCCTTGTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGTGTTGCTTCCAAGGAATTGAGGGCTTCT
CAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAGAAGAAGATACAGGAAGAGATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGGTTTTGGAAACATGAAAGAAAACGATGTGG
TGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGTATTTTAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGACAAAATTCATTGTTATGAAGATGGTATTA
AGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGTTGTGCCTTCCAGACCCTGAAACTGTGGCG
ACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCTGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGCTTTGGTGACGTCGAGAGGTCAAATAGTGC
TTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCCGAAGATACACCACCTTCTGGTGTGAACAGCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATCTCTAGGGAGAAACGGTATGCAGCAATGGA
AGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGTGTTTGATAAAGCCCCCTGTGAAAGAAAGC
ACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCACATTATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCCGCGTGCTCAACCTATGCCCTTCTT
TGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAATAATAAGTTCCAGATTAATGGAAGTTATCTCTGTACAACTACATTATTTAGGCTGGAGAAAAATAAGTTTTCTTTT
GAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCTCTGGTCACTTTGTGTTTTGGTTCACAAAGCCAAGCAATATAGTACTAGTTTTGTGATTACAGGCATCAATTCCCTGTGAAAAGAAGATAGAGAGCATTCATTGTGCCATGGAATGATGCTTGTTCTGTGACCTGTCTGCTCATGCAGACAAAGT
CGACAATGAAGTTTTTCATTTATTTGTATTTTTAGTCATTTGTTTATTAACAAATGTCAAGATAATATATGTAAGCTTTCAAGCAGTATTTTCTTATAATTCAGGCCTGATGTAATTATAAAGCTTGAATTGGAAGTTGTTTTTCTTTTCAATTAGATGTAGGCTCTAGCCATGAGAATCACAAGAGATGGGAGAGGTTG
GTGGTTAATTACAGAAGTTTGTGTGGATCAAGGTAACTTTAAGGGACTATTATTAAACGAGTAGAACTGTTTGGTGA
>TRINITY_DN45296_c0_g1_i5 from sample A7 / Example unspliced isoform:GGTAAAATGCAAACACAAAGCTCTGCAAACATAAAGCATGTAGCTTTATGTTTTGTTACTTTATCACTTCTTGCTTAAAAACATTCACATTTATTTTTAATTGTAGGCATGTACTGTATCAGAGGAGATCATTACTTTCCTCCCCTTTCATTCTAACCCCATCTGTGGTTTAGAACTTGCTTGACTGCCCCTATAATTGT
TTTGTATGATTTCCTTGTAAGGCTCCTTAGAACTAGATTTCCACATTTGATCTGTTTTTTCACTGTAAACAGTTGGACAGTTGTTTTTGACTAACAGATATTTTATTCCTTTTGTTACTTATTTGACACAATATTTATAATTGATCCTGACCTTAATCTAAATATACGCTTTACTCATAGCATGCATAACATTATTTAAG
GTAATGTGAAGGAAACTACAGTCAGCTCTGAGTCACCCAGTTACATTGACCATTCGCATGGAATTGGGTTGATTGTTGCATGTGATTGTCCTAATTTAATAGGGATGAGGCAGAATCTTTTAAACACCTATGCTTATAACCAGATCAACAATCTAGCAATGTTTGAATTTAATGGTATTTAGTAGTGTGCACTGTGCATG
TCCCATACTCTTACTCATAGCCTGTAATGCATGCCCTGCAGCCTTGCTGATAATCTTGTTATTGATTTCTCTTTGCCTGGAAAAAAATGCATTTACCTTTCCATCTCTGAATTTAGCCAAAAGGCAATAAATTTCCATGATGTAATGAGCTTTAACAACTTGCAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAA
GAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGgttactactgaattaaagatatatgtttactggcatccaaattttgtatattagtattgataactgatctctcagcattagtctggaatctgaatcttttgtatgtgttaaaatg
acagTGTTTGATAAAGCCCCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTGCTGAATTTGATCAAATTGTAAGGCATAATTTTTGTTTCTTTGTATGAGTTTTAATGCCCTTTAAATTTACATAGCCTTTAATCATCTTCTTCTGTGGTGAATCAAATAGATCGC
AGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGGTATGCATGATTGTGTTGTTTTGTTGTTGTGTATCTTATTTTGACACCTATAGATTAGTGTAGTGATGCATGCACTTGACAA
Intron 8 GTATGGCTTC ... ACTTGAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 28.6 | 13.3 | 5.7 | 5 |
| A2 | 18.98 | 7 | 2.3 | 1 |
| A3 | 0 | 9 | 0 | 0 |
| A4 | 34.8 | 10.3 | 10 | 1 |
| A5 | 25 | 3 | 0 | 2 |
| A6 | 20.2 | 56 | 6.3 | 22 |
| A7 | 18.79 | 103 | 22 | 26 |
| A8 | 21.44 | 129 | 39.7 | 32 |
| A9 | 15.44 | 115.5 | 18.3 | 24 |
| A10 | 21.29 | 94.8 | 24.7 | 27 |
>TRINITY_DN44001_c0_g5_i6 from sample A8 / Example spliced isoformATACAATACATTAGTGTAGAATTCATTTCGTAAGCCATTGAGCCTTCGAGCAGAAAATGAGCTTCTCAGGCTCCCCTGCAGTGAAGGGACTGCAATCCCCATTGAGCATGCAGAAGGGCAGTCCCAGTCCTCGTTTCAAGAGTCCTCGCAATAGGAAGAAAAAGTCTCAGGAAGAGGATTTGAACAATGGGTTCAATTCT
CCTTCTGCTGCCATTGCTGCAGAAAACCGTGATCCTAATTTTAGTGTGAAAATCTCTATTGGGCATGTGAAAAACTCTGGTGGGTCTCTGAAATCTAATCTTTCAGAAGTACCCTCGTTGGCTATTGCTTCTGGAATTCATTCATGTAAGTCTAGGAGATGTGCTGCTAATTACGCAGATTGGGGGTCGGTCAATTTCAA
GGCTCAACCCCGCAAATTCCTTGTTGCAAAGAGGCATGATCGGCCTGAGAAGGAGCTCACTGAATGCAAATGCAGTGAAAAAAAGGCGGATGGAGATAAATCTAGAAAATGTGCTTGTGTTGCTTCCAAGGAATTGAGGGCTTCTCAGGAGGAGTTTTGCAAGGACAATCTGCAGTTAACACCTTCTGATTCCGCAGAAG
AAGAAGATACAGGAAGAGGTAAGGACTGCAAAACCCAAGTCTCTATTGTGAATTTTGAGATTTCAAACGATGATAAACGTCATGAATTTGAATGCAATGTAGATGGCAGATATGGGGTTGCTGAGAAAAATGGAGATATGATGTGCATTGAAGAGAGCATAAATGAGAAAATTCAATATGCTGAAGAGGGCATAAATGGG
TTTTGGAAACATGAAAGAAAACGATGTGGTGAACAGGGCATGAATGGATTTTGTAGGGAAGAGAGAAATGAGGAGGTTCATTGTGGTGAAGAGGGCAGAAATGGGTATTTTAGTGAAGGAAAACACTCAGAATTCCAATATGGTGAAGTGGGTACCGACTTGACTCAGATTGATGGCCTCGGTAATAGCAGTATGCATGA
CAAAATTCATTGTTATGAAGATGGTATTAAGAATTTTGATGGGTATGGGAAGTGTTCATTGCCTATTTCATCAACACCCCAGAATATATCCTCGGCCCCTAGGAGGATGAGAAATGAACTGCTTGAAGAAGCAATCGGCACCATTCCACAACAGGGAGGAGGAAGAGTGAAGCATTTAGTAAAGGCTTTTGAAAGCCTGT
TGTGCCTTCCAGACCCTGAAACTGTGGCGACAGAAGGCTACAGAACTAGGCCATTGGATAGATCTATCTATAATTTTCCCGATTACACTGAAGAGAAGCGAGAGTTGAGTGTGAGTAGGGTTGTGAAGTGGGCACTTCCTGGAATGCAGGGACAGGCCTCAGCGGAGAAGCTGGATAGTGATAGTCCAACTAATGAAAGC
TTTGGTGACGTCGAGAGGTCAAATAGTGCTTCATGTCTTGAAAGCTATGCTGATTTCAAGTTCTGTGTTTCCGAAGATACACCACCTTCTGGTGTGAACAGCGATACTCAAAGTGTTTGTTCAGGTGGAAGAAGCGGAAGCAGTTCCGGGAGCAGAAGAAGAGGCACCAAAGGGAGCTTGAACTCCAGTGGACAAGGATC
TCTAGGGAGAAACGGTATGCAGCAATGGAAGAAGCAACTTAAGGTCACCGCTGCACAACCTTTCAAGCTCCAAACGGAGCAAAGAGGCCTCATGAAAGAGAGAGAGTTCATGAAGAAGCTCCGGGAGATGCTCACTGAGGAGGAAAAACTTCGAATTCCAATTGCACAAGGGTTGCCATGGACAACAGATGAGCCAGAGG
TTACTACTGAATTAAAGATATATGTTTACTGGCATCCAAATTTTGTATATTAGTATTGATAACTGATCTCTCAACATTAGTCTGGAATCTGAATCTTTTGTATGTGTTAAAATGACAGTGTTTGATAAAGCCCCCTGTGAAAGAAAGCACTAAGCCAATGGATTTGAAGCTTCACACTGAAATAAGGGCAGTTGATCGTG
CTGAATTTGATCAAATTGTAAGGCATAATTTTTGTTTCTTTGTATGAGTTTTAATGCCCTTTAAATTTACATAGCCTTTAATCATCTTCTTCTGTGGTGAATCAAATAGATCGCAGAAAGACTCAAAGCCATAGAACAAGAAAGACTAGAACAAGAGAGACTGCAGAAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGA
GAAAAGAGTTGGTTCCGCGTGCTCAACCCATGCCCTTCTTTGACCGTCCTTTCATTCCTAAAAGATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAATAATAAGTTCCAGATTAATGGAAGTTATCTCTGTAC
AACTACATTATTTAGGCTGGAGAAAAATAAGTTTTCTTTTGAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCTCTGGTCACTTTGTGTTTGGTTCACAAAGCCAAGCAATATAGTACTAGTTTTGTGATTACAGGTATCAATTCCCTGTGAAAAGAAGATAGAGAGCATTCATTGTGCCATGGAATG
ATGCTTGTTCTGTGACCTGTCTGCTCATGCAGACAAAGTCAACAATGAAGTTTTTCATTTATTTGTATTTTTAGTCATTTGTTTATTAACAAATGTCAAGATAATATATGTGAGCTTTTTCAAGCAGTATTTTCTTATATTTCAGGCCTGATGTAATTATAAGGCTTGATTTGGAAGTTGTTTTTCTTTTCAATTAGATG
TAGGCTCTAGCCATGAGAATCACAAGAGATGGGAGAGGTTGGTGGTTAATTACAGAAGTTTGTGTGGATCAAGGTAACTTTAAGGGACTATTATTAAACGAGTAGAACTGTTTGG
>TRINITY_DN44001_c0_g5_i8 from sample A8 / Example unspliced isoform:TAGAACAAGAGAGACTGCAGAAGGTATGCATGATTGTGTTGTTTTGTTGTTGTGTATCTTATTTTGACACCTATAGATTAGTGTAGTGATGCATGCACTTGACAACTGATTTCAACAGTTAGCTGAAGAAGAGGAGATCAAGAGGCTGAGAAAAGAGTTGGTTCCGCGTGCTCAACCCATGCCCTTCTTTGACCGTCCTT
TCATTCCTAAAAGgtatggcttcttatagtaccaagcaagatgtgtgtgtttctgtaaacaagatgtctaagagtctcatgtgattgtgacttgaacagATCCTCAAAGCTCCCAACCATCCCCAGGGAGCCCAGGTTCCAGATTCCTAATCACAAAAGAGCGAAGTCCATATCGTGGAATGATTTCAACGCTTATCAAT
AATAAGTTCCAGATTAATGGAAGTTATCTCTGTACAACTACATTATTTAGGCTGGAGAAAAATAAGTTTTCTTTTGAGATTCAAGTTGATGGCTCATCAAAGATTGAAATTTTTTGAATCTCTGGTCACTTTGTGTTT