sp|P0CZ21|MRS28_ARATH ----> Magnesium transporter MRS2-8
Intron 1 GTATGAATAT ... TTGTCAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.83 | 30 | 15 | 7 |
| A2 | 24.07 | 41 | 13 | 13 |
| A3 | 25 | 33 | 18 | 4 |
| A4 | 21.74 | 27 | 11 | 4 |
| A5 | 20 | 16 | 6 | 2 |
| A6 | 22.58 | 108 | 37 | 26 |
| A7 | 21.47 | 128 | 49 | 21 |
| A8 | 22.14 | 204 | 83 | 33 |
| A9 | 21.26 | 150 | 50 | 31 |
| A10 | 23.75 | 114 | 55 | 16 |
>TRINITY_DN41920_c0_g1_i6 from sample A9 / Example spliced isoformCAAAAAGGAAGTGCAAATCTCATATTCTCGAGCACACGCCTTTAAATAGTTGAACCTAAACTGGTTCTCTCTAGGACCGAATTTGACATGAGATTTTCGCGCTGGCCGTTTAAGTCCCACCTCAAAACCCTCGCATATCATCATGCAAGCCTTTAAGCAGCGCGCCACCACAATAGGATTCCGAGGAGTTCTATTACTCC
AGAGCGTTTTCATTTCAACCGGATGCCCCCACAAACTATCCGAGCATACCGGTCTGCCTGCAGACGCCAGGTTTCCTATTTTCAGGGGGCGTTTTTCCGGACAGAATAGCTTGAATGACACAGCGGAGTTCGGTTGGTCGGGGTGTCGTGGCAGAAGAAATATCAAAAATCATTTCGGTCCCATTTCTGTTGACGAGAAG
ACGTCGAATGTTAGTATGGAAGGAGGAAATCAATACTCTGTTATTAAAATCGACGATTCCGGCAACTACCAGCCAATGCTTCTCAATATCACGGAGCTTGAAAGGGCTACATAAATCACAACTTCTCTCACCAAAAATATGTGTCTCACGCCAAGAGGCTTTGCAAAAAGAAAGGGAAGCTTTTGCATTGTCTATGGCTG
AGTATGCAAAGAGAAATACCTCTACTTTACAAGAGTCAATTCCATTTCACCTTCGGATGATAGAGTGTATGCTTGAAGAAACATGCAATTTTTTTCATCAAAAGGTTGAAAGGTTGAAGATAGTGGTAGAGAAAGTTCTGGAGGATCTGACATATGATGTTAATATGGGAGGGTTGCAGAGATTGCTACCTCTTAAGAGA
GTCCTGACTGAAGTGGAGCATGATATCTCCGACACACATGAAGCTATAGAGCAGGTTTTGGAAAGTGACGATGCTCTGACCGCCCTCTTGCTTGAGCACTGGGAGAATCCCACAACATCATCTGGGACCGGGTCACAACATTTTTCAGAGCAAGATCAGGGTCGGGATAAGCTTCGTCGAGCAGCTGCAGACATCATACT
GACATATCAACGCCAGGTTGATGATGCAGGGGGTGTGGTTGAAGAGCTAAGGAAAGGTATTGATTCAGCACAAGAGGTCTGGGAGCTTACACTAGATACAACAAGAAATAAAATAATACGCATGAACCTTTTTATTTCAATGGCGACACTATCTTTCAGCTTAGCCGCTGTTCCTGCAAGCTTCTTTGGAATGAATCTGG
TTAGTGGACTGGAGACTTCACCTCATGCATTCTATATCATTTTAGGAGCAGCATCTTCATCTTCAGTTTTTGTTGGCGTGGGACTTTTTTTAATGTTCCGTAAATTTCTTGAGGGGCATCGTGCACAGGATCTTGCAGCTTTACAGGATCTTCTGCGTCACATTGATGATATAGATGAAATTTTCCAGGCCTTGAAATCG
AAAGGTTCTGCAGTAAGTGAAGAGGAGTTGAAGAAGCTTCTTCGTTCACATCCCTCTATTGGATCAATGCAAGAGAGAGAGATTGACTTGATGATACGTATGTTTGACAACCACCGAAACAGCCAACTTGAGACTCGCGAGTGGAATGCAGTGTCAAGGCAACAGTCAAAAGCAAGGGCACAAGGCTGAATTTACAACAT
GAGTATTTTCTAGAGCCAGCGTATCAAAGATTCAGTGTTTATGTTTCTACACATTTAATACATCCAGATATACACTCCCTCTTCGGCAGAATTGACAAACTCTGAAGCAGGAATGCCTTCCTGGGAGTAATGATGATCAGGCATTTTGAAGACTGCTTGTGGATGGAGATAAAACTCTAGGGGTTATAAATTGCATTATC
TTTTAAGTTGGCAACATCTTTCTTCTCCTAGAGATGATTTTAGTAGAATTTTGTGCATTTATTATGGTTTCAATCAATTATTTGCATATTGTTCCTGAATTTCAACGCTTGATGAGATTGCCGTCATTTTGGTTAGACTTGAAGCCTTAGCTGTGTTTTCATCACAGATGTGAATCTGCAGTGAATACCTGGTAATGATT
AAATCATTGGTGTGCACACCTCCATGTGCATATATAAACATTAAGTTGAATCTTTCAAAGGTAATTGATGGCAGATGCCCAGGTTCCCTGTTGTTTGTTAATAATAAATATTGGAAGGGAAATAACTTATATGATATGTGAAATTACAAACAATTTTTGCGGTAATTGTCACCCATTTTAGTCCAAATATTTTTTTTATA
GAAGTGAAATGGTTTTTGAGTATGCAAAATATGAACAATTTTTGTGGAATCTTGCACCGCCAATCCCTTACGTTACAGTGTTGGACTCCATGTACATACATGCAGAAGTAAAAGAACAAGCATAGTTTTGTAACTCCTTTTGTTTGAATCACTCTTTGAATCAGTACATAAAATACTTTGGTAGAGAGCCATGGGAAATT
GGCTGGGGTTTAAATGCGTACTCTTCATTATCTTCTGGACATGTGGAGGTAATCAATGTCAATTTTGAGCAGAATATGACTGGCCTATATCTTTGTTGATTTGCATCAGAAGTATCTCTAATACGCATACAAGCGTAGCCATTTTATTTTAAGCATCGAGTGC
>TRINITY_DN41920_c0_g1_i2 from sample A9 / Example unspliced isoform:CAAAAAGGAAGTGCAAATCTCATATTCTCGAGCACACGCCTTTAAATAGTTGAACCTAAACTGGTTCTCTCTAGGACCGAATTTGACATGAGATTTTCGCGCTGGCCGTTTAAGTCCCACCTCAAAACCCTCGCATATCATCATGCAAGCCTTTAAGCAGCGCGCCACCACAATAGGATTCCGAGGAGTTCTATTACTCC
AGAGCGTTTTCATTTCAACCGGATGCCCCCACAAACTATCCGAGCATACCGGTCTGCCTGCAGACGCCAGGTTTCCTATTTTCAGGGGGCGTTTTTCCGGACAGAATAGCTTGAATGACACAGCGGAGTTCGGTTGGTCGGGGTGTCGTGGCAGAAGAAATATCAAAAATCATTTCGGTCCCATTTCTGTTGACGAGAAG
ACGTCGAATGTTAGTATGGAAGGAGGAAATCAATACTCTGTTATTAAAATCGACGATTCCGGCAACTACCAGCCAATGCTTCTCAATATCACGGAGCTTGAAAGGGCTACATAAATCACAACTTCTCTCACCAAAAATATGTGTCTCACGCCAAGAGGCTTTGCAAAAAGAAAGGGAAGCTTTTGCATTGTCTATGGCTG
AGTATGCAAAGAGAAATACCTCTACTTTACAAGAGTCAATTCCATTTCACCTTCGGATGATAGAGTGTATGCTTGAAGAAACATGCAATTTTTTTCATCAAAAGGTTGAAAGGTTGAAGATAGTGGTAGAGAAAGTTCTGGAGGATCTGACATATGATGTTAATATGGGAGGGTTGCAGAGATTGCTACCTCTTAAGAGA
GTCCTGACTGAAGTGGAGCATGATATCTCCGACACACATGAAGCTATAGAGCAGGTTTTGGAAAGTGACGATGCTCTGACCGCCCTCTTGCTTGAGCACTGGGAGAATCCCACAACATCATCTGGGACCGGGTCACAACATTTTTCAGAGCAAGATCAGGGTCGGGATAAGCTTCGTCGAGCAGCTGCAGACATCATACT
GACATATCAACGCCAGGTTGATGATGCAGGGGGTGTGGTTGAAGAGCTAAGGAAAGGTATTGATTCAGCACAAGAGGTCTGGGAGCTTACACTAGATACAACAAGAAATAAAATAATACGCATGAACCTTTTTATTTCAATGGCGACACTATCTTTCAGCTTAGCCGCTGTTCCTGCAAGCTTCTTTGGAATGAATCTGG
TTAGTGGACTGGAGACTTCACCTCATGCATTCTATATCATTTTAGGAGCAGCATCTTCATCTTCAGTTTTTGTTGGCGTGGGACTTTTTTTAATGTTCCGTAAATTTCTTGAGGGGCATCGTGCACAGGATCTTGCAGCTTTACAGGATCTTCTGCGTCACATTGATGATATAGATGAAATTTTCCAGGCCTTGAAATCG
AAAGGTTCTGCAGTAAGTGAAGAGGAGTTGAAGAAGCTTCTTCGTTCACATCCCTCTATTGGATCAATGCAAGAGAGAGAGATTGACTTGATGATACGTATGTTTGACAACCACCGAAACAGCCAACTTGAGACTCGCGAGTGGAATGCAGTGTCAAGGCAACAGTCAAAAGCAAGGGCACAAGGCTGAATTTACAACAT
GAGTATTTTCTAGAGCCAGCGTATCAAAGATTCAGTGTTTATGTTTCTACACATTTAATACATCCAGATATACACTCCCTCTTCGGCAGAATTGACAAACTCTGAAGCAGGAATGCCTTCCTGGGAGTAATgtatgaatatggtaattcatttgattctgcaatagagaaacgattaaaaagatatagaataatcgtaat
attgtatccaaacaaattctcatcatatgattttcttgtcagcagGATGATCAGGCATTTTGAAGACTGCTTGTGGATGGAGATAAAACTCTAGGGGTTATAAATTGCATTATCTTTTAAGTTGGCAACATCTTTCTTCTCCTAGAGATGATTTTAGTAGAATTTTGTGCATTTATTATGGTTTCAATCAATTATTTGCA
TATTGTTCCTGAATTTCAACGCTTGATGAGATTGCCGTCATTTTGGTTAGACTTGAAGCCTTAGCTGTGTTTTCATCACAGATGTGAATCTGCAGTGAATACCTGGTAATGATTAAATCATTGGTGTGCACACCTCCATGTGCATATATAAACATTAAGTTGAATCTTTCAAAGGTAATTGATGGCAGATGCCCAGGTTC
CCTGTTGTTTGTTAATAATAAATATTGGAAGGGAAATAACTTATATGATATGTGAAATTACAAACAATTTTTGCGGTAATTGTCACCCATTTTAGTCCAAATATTTTTTTTATAGAAGTGAAATGGTTTTTGAGTATGCAAAATATGAACAATTTTTGTGGAATCTTGCACCGCCAATCCCTTACGTTACAGTGTTGGAC
TCCATGTACATACATGCAGAAGTAAAAGAACAAGCATAGTTTTGTAACTCCTTTTGTTTGAATCACTCTTTGAATCAGTACATAAAATACTTTGGTAGAGAGCCATGGGAAATTGGCTGGGGTTTAAATGCGTACTCTTCATTATCTTCTGGACATGTGGAGGTAATCAATGTCAATTTTGAGCAGAATATGACTGGCCT
ATATCTTTGTTGATTTGCATCAGAAGTATCTCTAATACGCATACAAGCGTAGCCATTTTATTTTAAGCATCGAGTGC
Intron 2 GTATACTTTG ... TCCTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 20.63 | 50 | 0 | 13 |
| A2 | 23.53 | 39 | 0 | 12 |
| A3 | 11.54 | 46 | 0 | 6 |
| A4 | 18.18 | 36 | 0 | 8 |
| A5 | 23.81 | 16 | 0 | 5 |
| A6 | 2.7 | 36 | 0 | 1 |
| A7 | 22 | 117 | 0 | 33 |
| A8 | 12.73 | 96 | 0 | 14 |
| A9 | 12.93 | 121.3 | 0 | 18 |
| A10 | 10.48 | 94 | 0 | 11 |
>TRINITY_DN128180_c0_g2_i5 from sample A1 / Example spliced isoformCCCTCCCAAAACCCACTTCATGTTCGTTGTTTTGCTGTGACAAAAAGGAAGTGCAAATCTCATATTCTCGAGCACACGCCTTTAAATAGTTGAACCTAAACCTGGTTCTCTCTAGGACCGAATTTGACATGAGATTTTCGCGCTGGCCGTTTAAGTCCCACCTCAAAACCCTCGCATATCATCATGCAAGCCTTTAAGCA
GCGCGCCACCACAATAGGATTCCGAGGAGTTCTATTACTCCAGAGCGTTTTCATTTCAACCGGATGCCCCCACAAACTATCCGAGCATACCGGTCTGCCTGCAGACGCCAGGTTTCCTATTTTCAGGGGGCGTTTTTCCGGACAGAATAGCTTGAATGACACAGCGGAGTTCGGTTGGTCGGGGTGTCGTGGCAGAAGAA
ATATCAAAAATCATTTCGGTCCCATTTCTGTTGACGAGAAGACGTCGAATGTTAGTATGGAAGGAGGAAATCAATACTCTGTTATTAAAATCGACGATTCCGGCAACTACCAGCCAATGCTTCTCAATATCACGGAGCTTGGCATTCACCCAAGAGACATGGACTTACTGGTTGGCAACTTTTTCATTCCTAAACGGTCT
ACTATTGCTTTGAGGAGAGAAAAGGTGTTGATAAGAATGGAAAACGTCAGAGCTCTCGTTTTCAAGAATTACTGTTTTCTTTTTGACATACACCCACGGAAAGGGCTACATAAATCACAACTTCTCTCACCAAAAATATGTGTCTCACGCCAAGAGGCTTTGCAAAAAGAAAGGGAAGCTTTTGCATTGTCTATGGCTGA
GTATGCAAAGAGAAATACCTCTACTTTACAAGAGTCAATTCCATTTCACCTTCGGATGATAGAGTGTATGCTTGAAGAAACATGCAATTTTTTTCATCAAAAGGTTGAAAGGTTGAAGATAGTGGTAGAGAAAGTTCTGGAGGATCTGACATATGATGTTAATATGGGAGGGTTGCAGAGATTGCTACCTCTTAAGAGAG
TCCTGACTGAAGTGGAGCATGATATCTCCGACACACATGAAGCTATAGAGCAGGTTTTGGAAAGTGACGATGCTCTGACTGCCCTCTTGCTTGAGCACTGGGAGAATCCCACAACATCATCTGGGACTGGGTCACAACATTTTTCAGAGCAAGATCAGGGTCGGGATAAGCTTCGTCGAGCAGCTGCAGACATCATACTG
ACATATCAACGCCAGGTTGATGATGCAGGGGGTGTGGTTGAAGAGCTAAGGAAAGGTATTGATTCAGCACAAGAGGTCTGGGAGCTTACACTAGATACAACAAGAAATAAAATAATACGCATGAACCTTTTTATTTCAATGGCGACACTATCTTTCAGCTTCGCCGCTGTTCCTGCAAGCTTCTTTGGAATGAATCTGGT
TAGTGGACTGGAGACTTCACCTCATGCATTCTATATCATTTTAGGAGCAGCATCTTCATCTTCGGTTTTTGTTGGCGTGGGACTTTTTTTAATGTTCCGTAAATTTCTTGAGGGGCATCGTGCACAGGATCTTGCAGCTTTACAGGATCTTCTGCGTCACATTGATGATATAGATGAAATTTTCCAGGCCTTGAAATCGA
AAGGTTCTGCAGTAAGTGAAGAGGAGTTGAAGAAGCTTCTTCGTTCACATCCCTCTATTGGATCAATGCAAGAGAGAGAGATTGACTTGATGATACGTATGTTTGACAACCACCGAAACAGCCAACTTGAGTGTCACGGCAACAGTCAAAAGCAAGGGCACAAGGCTGAATTTACAACATGAGTATTTTCTAGAGCCAGC
GTATCAAAGATTCAGTGTTTATGTTTCTACACATTTAATACATCCAGATATACACTCCCTCTTCGGCAGAATTGACAAACTCTGAAGCAGGAATGCCTTCCTGGGAGTAATGTATGAATATGGATGATCAGGCATTTTGAAGACTGCTTGTGGATGGAGATAAAACTCTAGGGGTTATAAATTGCATTATCTTTTAAGTT
GGCAACATCTTTCTTCTCCTAGAGATGATTTTAGTAGAATTTCGTGCATTTATTATGGTTTCAATCAATTATTTGCATATTGTTCCCGAATTTCAACGCTTGATGAGATTGCCGTCATTTTGGTTAGACTTGAAGCCCTAGCTGTGTTTTCATCACAGATGTGAATCTGCAGTGAATACCTGGTAATGATTAAATCATTG
GTGTGCACACCTCCATGTGCATATATAAACATTAAGTTGAATCTTTCAAAAGGTAATTGATGGCAGATGCCCAGGTTCCCTG
>TRINITY_DN128180_c0_g2_i2 from sample A1 / Example unspliced isoform:TTCTTTGGAATGAATCTGGTTAGgtatactttgttgtttgctcacttggtaacatggatctaactacttggtttcacgcaatgctacttatttgacatacacatgaactagtgatactgttgttttctaacatgttatcttttagcttctagcacttttcctatgaaagaattcttaccaggaattggtgacatagcttt
atgaccttaaataatgtcctttgcagTGGACTGGAGACTTCACCTCATGCATTCTATATCATTTTAGGAGCAGCATCTTCATCTTCGGTTTTTGTTGGCGTGGGACTTTTTTTAATGTTCCGTAAATTTCTTGAGGGGCATCGTGCACAGGATCTTGCAGCTTTACAGGATCTTCTGCGTCACATTGATGATATAGATGA
AATTTTCCAGGCCTTGAAATCGAAAGGTTCTGCAGTAAGTGAAGAGGAGTTGAAGAAGCTTCTTCGTTCACATCCCTCTATTGGATCAATGCAAGAGAGAGAGATTGACTTGATGATACGTATGTTTGACAACCACCGAAACAGCCAACTTGAG
Intron 3 GTATGTATTT ... GGTTTTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.93 | 80.6 | 6.3 | 14.9 |
| A2 | 3.43 | 97.8 | 0 | 3.8 |
| A3 | 6 | 85.4 | 1.8 | 6 |
| A4 | 14.35 | 74.1 | 2 | 13.3 |
| A5 | 9.05 | 25.1 | 0.6 | 3.1 |
| A6 | 4.81 | 66.8 | 0 | 3.8 |
| A7 | 6.82 | 171.9 | 1 | 13.8 |
| A8 | 6.25 | 129.2 | 0 | 10 |
| A9 | 5.85 | 150 | 0 | 10.8 |
| A10 | 8.91 | 171 | 0 | 19.2 |
>TRINITY_DN128180_c0_g2_i5 from sample A1 / Example spliced isoformCCCTCCCAAAACCCACTTCATGTTCGTTGTTTTGCTGTGACAAAAAGGAAGTGCAAATCTCATATTCTCGAGCACACGCCTTTAAATAGTTGAACCTAAACCTGGTTCTCTCTAGGACCGAATTTGACATGAGATTTTCGCGCTGGCCGTTTAAGTCCCACCTCAAAACCCTCGCATATCATCATGCAAGCCTTTAAGCA
GCGCGCCACCACAATAGGATTCCGAGGAGTTCTATTACTCCAGAGCGTTTTCATTTCAACCGGATGCCCCCACAAACTATCCGAGCATACCGGTCTGCCTGCAGACGCCAGGTTTCCTATTTTCAGGGGGCGTTTTTCCGGACAGAATAGCTTGAATGACACAGCGGAGTTCGGTTGGTCGGGGTGTCGTGGCAGAAGAA
ATATCAAAAATCATTTCGGTCCCATTTCTGTTGACGAGAAGACGTCGAATGTTAGTATGGAAGGAGGAAATCAATACTCTGTTATTAAAATCGACGATTCCGGCAACTACCAGCCAATGCTTCTCAATATCACGGAGCTTGGCATTCACCCAAGAGACATGGACTTACTGGTTGGCAACTTTTTCATTCCTAAACGGTCT
ACTATTGCTTTGAGGAGAGAAAAGGTGTTGATAAGAATGGAAAACGTCAGAGCTCTCGTTTTCAAGAATTACTGTTTTCTTTTTGACATACACCCACGGAAAGGGCTACATAAATCACAACTTCTCTCACCAAAAATATGTGTCTCACGCCAAGAGGCTTTGCAAAAAGAAAGGGAAGCTTTTGCATTGTCTATGGCTGA
GTATGCAAAGAGAAATACCTCTACTTTACAAGAGTCAATTCCATTTCACCTTCGGATGATAGAGTGTATGCTTGAAGAAACATGCAATTTTTTTCATCAAAAGGTTGAAAGGTTGAAGATAGTGGTAGAGAAAGTTCTGGAGGATCTGACATATGATGTTAATATGGGAGGGTTGCAGAGATTGCTACCTCTTAAGAGAG
TCCTGACTGAAGTGGAGCATGATATCTCCGACACACATGAAGCTATAGAGCAGGTTTTGGAAAGTGACGATGCTCTGACTGCCCTCTTGCTTGAGCACTGGGAGAATCCCACAACATCATCTGGGACTGGGTCACAACATTTTTCAGAGCAAGATCAGGGTCGGGATAAGCTTCGTCGAGCAGCTGCAGACATCATACTG
ACATATCAACGCCAGGTTGATGATGCAGGGGGTGTGGTTGAAGAGCTAAGGAAAGGTATTGATTCAGCACAAGAGGTCTGGGAGCTTACACTAGATACAACAAGAAATAAAATAATACGCATGAACCTTTTTATTTCAATGGCGACACTATCTTTCAGCTTCGCCGCTGTTCCTGCAAGCTTCTTTGGAATGAATCTGGT
TAGTGGACTGGAGACTTCACCTCATGCATTCTATATCATTTTAGGAGCAGCATCTTCATCTTCGGTTTTTGTTGGCGTGGGACTTTTTTTAATGTTCCGTAAATTTCTTGAGGGGCATCGTGCACAGGATCTTGCAGCTTTACAGGATCTTCTGCGTCACATTGATGATATAGATGAAATTTTCCAGGCCTTGAAATCGA
AAGGTTCTGCAGTAAGTGAAGAGGAGTTGAAGAAGCTTCTTCGTTCACATCCCTCTATTGGATCAATGCAAGAGAGAGAGATTGACTTGATGATACGTATGTTTGACAACCACCGAAACAGCCAACTTGAGTGTCACGGCAACAGTCAAAAGCAAGGGCACAAGGCTGAATTTACAACATGAGTATTTTCTAGAGCCAGC
GTATCAAAGATTCAGTGTTTATGTTTCTACACATTTAATACATCCAGATATACACTCCCTCTTCGGCAGAATTGACAAACTCTGAAGCAGGAATGCCTTCCTGGGAGTAATGTATGAATATGGATGATCAGGCATTTTGAAGACTGCTTGTGGATGGAGATAAAACTCTAGGGGTTATAAATTGCATTATCTTTTAAGTT
GGCAACATCTTTCTTCTCCTAGAGATGATTTTAGTAGAATTTCGTGCATTTATTATGGTTTCAATCAATTATTTGCATATTGTTCCCGAATTTCAACGCTTGATGAGATTGCCGTCATTTTGGTTAGACTTGAAGCCCTAGCTGTGTTTTCATCACAGATGTGAATCTGCAGTGAATACCTGGTAATGATTAAATCATTG
GTGTGCACACCTCCATGTGCATATATAAACATTAAGTTGAATCTTTCAAAAGGTAATTGATGGCAGATGCCCAGGTTCCCTG
>TRINITY_DN128180_c0_g2_i1 from sample A1 / Example unspliced isoform:GGATATCTTATAGCATTTGTTGGTCAACTATGTAATGCCTTGTGACTTTTAAGTGTGGTTGCATACTCTTGAAAAACATGACAACTTTCTATCCAGGTATGTCCAATAACCACTGACTGGTAATTATAACCTCAGGTGCAAGTAGTTCAAGATTAATTGTTGTTGTATAACTGCCCAGATACGAATGTTTCTACAGAGCA
GTGTGGTAGCTTAGATGACTAGCCTTTCTTGAATTGTTTACACCAAATGCAGCGACCCTTATTTTCTGGTTTTGTGATTGCTAAGCTTCTGAATTTTTATTGTCAATAGTATCGGAAGTTTTCAGAGTATGATATCTACAAAGCATCGTTTTCATCTTGGACAACTATAGATGGTTTTTGAGTTTTAACAAAATATGTTA
TTTCTTAGGTTGATGATGCAGGGGGTGTGGTTGAAGAGCTAAGGAAAGGTATTGATTCAGCACAAGAGgtatgtatttacttagcttttaaatatgatatcaaatttaaaatccatttagccaattctttctttaccagattttcattctgttgcagttgtaagcatccacctatcattcttaattacatattttgttgg
ttttgaagGTCTGGGAGCTTACACTAGATACAACAAGAAATAAAATAATACGCATGAACCTTTTTATTTCAATGGCGACACTATCTTTCAGCTTGTAAGAGTCTTTGATTCTTATTTTTGTTTCATGCAATGATAACAAGTACTACATGTTTTAACCTTTTAGTCTGATAGCATTTCAACCTGCTCGGAAAGCAACAAAA
GGATTTTCCTTTCGGAATTTTTAGTTGACTTATGATGTGTGTGCTTATTCCTTTTTCTGAT
Intron 4 GTAATTCATT ... TTGTCAGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.03 | 27 | 12 | 7 |
| A2 | 23.53 | 39 | 11 | 13 |
| A3 | 22.86 | 27 | 12 | 4 |
| A4 | 18.52 | 22 | 6 | 4 |
| A5 | 18.92 | 15 | 5 | 2 |
| A6 | 22.1 | 104 | 33 | 26 |
| A7 | 20.66 | 121 | 42 | 21 |
| A8 | 19.91 | 175 | 54 | 33 |
| A9 | 19.76 | 136 | 36 | 31 |
| A10 | 23.02 | 107 | 48 | 16 |
>TRINITY_DN41920_c0_g1_i1 from sample A9 / Example spliced isoformCAAAAAGGAAGTGCAAATCTCATATTCTCGAGCACACGCCTTTAAATAGTTGAACCTAAACCTGGTTCTCTCTAGGACCGAATTTGACATGAGATTTTCGCGCTGGCCGTTTAAGTCCCACCTCAAAACCCTCGCATATCATCATGCAAGCCTTTAAGCAGCGCGCCACCACAATAGGATTCCGAGGAGTTCTATTACTC
CAGAGCGTTTTCATTTCAACCGGATGCCCCCACAAACTATCCGAGCATACCGGTCTGCCTGCAGACGCCAGGTTTCCTATTTTCAGGGGGCGTTTTTCCGGACAGAATAGCTTGAATGACACAGCGGAGTTCGGTTGGTCGGGGTGTCGTGGCAGAAGAAATATCAAAAATCATTTCGGTCCCATTTCTGTTGACGAGAA
GACGTCGAATGTTAGTATGGAAGGAGGAAATCAATACTCTGTTATTAAAATCGACGATTCCGGCAACTACCAGCCAATGCTTCTCAATATCACGGAGCTTGGCATTCACCCAAGAGACATGGACTTACTGGTTGGCAACTTTTTCATTCCTAAACGGTCTACTATTGCTTTGAGGAGAGAAAAGGTGTTGATAAGAATGG
AAAACGTCAGAGCTCTCGTTTTCAAGAATTACTGTTTTCTTTTTGACATACACCCACGGTTGGATAATTACCATGCCTTTTGTTTTTGAAGTTTTAAAATGAAAGGGCTACATAAATCACAACTTCTCTCACCAAAAATATGTGTCTCACGCCAAGAGGCTTTGCAAAAAGAAAGGGAAGCTTTTGCATTGTCTATGGCT
GAGTATGCAAAGAGAAATACCTCTACTTTACAAGAGTCAATTCCATTTCACCTTCGGATGATAGAGTGTATGCTTGAAGAAACATGCAATTTTTTTCATCAAAAGGTTGAAAGGTTGAAGATAGTGGTAGAGAAAGTTCTGGAGGATCTGACATATGATGTTAATATGGGAGGGTTGCAGAGATTGCTACCTCTTAAGAG
AGTCCTGACTGAAGTGGAGCATGATATCTCCGACACACATGAAGCTATAGAGCAGGTTTTGGAAAGTGACGATGCTCTGACCGCCCTCTTGCTTGAGCACTGGGAGAATCCCACAACATCATCTGGGACCGGGTCACAACATTTTTCAGAGCAAGATCAGGGTCGGGATAAGCTTCGTCGAGCAGCTGCAGACATCATAC
TGACATATCAACGCCAGGTTGATGATGCAGGGGGTGTGGTTGAAGAGCTAAGGAAAGGTATTGATTCAGCACAAGAGGTCTGGGAGCTTACACTAGATACAACAAGAAATAAAATAATACGCATGAACCTTTTTATTTCAATGGCGACACTATCTTTCAGCTTAGCCGCTGTTCCTGCAAGCTTCTTTGGAATGAATCTG
GTTAGTGGACTGGAGACTTCACCTCATGCATTCTATATCATTTTAGGAGCAGCATCTTCATCTTCAGTTTTTGTTGGCGTGGGACTTTTTTTAATGTTCCGTAAATTTCTTGAGGGGCATCGTGCACAGGATCTTGCAGCTTTACAGGATCTTCTGCGTCACATTGATGATATAGATGAAATTTTCCAGGCCTTGAAATC
GAAAGGTTCTGCAGTAAGTGAAGAGGAGTTGAAGAAGCTTCTTCGTTCACATCCCTCTATTGGATCAATGCAAGAGAGAGAGATTGACTTGATGATACGTATGTTTGACAACCACCGAAACAGCCAACTTGAGACTCGCGAGTGGAATGCAGTGTCAAGGCAACAGTCAAAAGCAAGGGCACAAGGCTGAATTTACAACA
TGAGTATTTTCTAGAGCCAGCGTATCAAAGATTCAGTGTTTATGTTTCTACACATTTAATACATCCAGATATACACTCCCTCTTCGGCAGAATTGACAAACTCTGAAGCAGGAATGCCTTCCTGGGAGTAATGTATGAATATGGATGATCAGGCATTTTGAAGACTGCTTGTGGATGGAGATAAAACTCTAGGGGTTATA
AATTGCATTATCTTTTAAGTTGGCAACATCTTTCTTCTCCTAGAGATGATTTTAGTAGAATTTTGTGCATTTATTATGGTTTCAATCAATTATTTGCATATTGTTCCTGAATTTCAACGCTTGATGAGATTGCCGTCATTTTGGTTAGACTTGAAGCCTTAGCTGTGTTTTCATCACAGATGTGAATCTGCAGTGAATAC
CTGGTAATGATTAAATCATTGGTGTGCACACCTCCATGTGCATATATAAACATTAAGTTGAATCTTTCAAAGGTAATTGATGGCAGATGCCCAGGTTCCCTGTTGTTTGTTAATAATAAATATTGGAAGGGAAATAACTTATATGATATGTGAAATTACAAACAATTTTTGCGGTAATTGTCACCCATTTTAGTCCAAAT
ATTTTTTTTATAGAAGTGAAATGGTTTTTGAGTATGCAAAATATGAACAATTTTTGTGGAATCTTGCACCGCCAATCCCTTACGTTACAGTGTTGGACTCCATGTACATACATGCAGAAGTAAAAGAACAAGCATAGTTTTGTAACTCCTTTTGTTTGAATCACTCTTTGAATCAGTACATAAAATACTTTGGTAGAGAG
CCATGGGAAATTGGCTGGGGTTTAAATGCGTACTCTTCATTATCTTCTGGACATGTGGAGGTAATCAATGTCAATTTTGAGCAGAATATGACTGGCCTATATCTTTGTTGATTTGCATCAGAAGTATCTCTAATACGCATACAAGCGTAGCCATTTTATTTTAAGCATCGAGTGC
>TRINITY_DN41920_c0_g1_i2 from sample A9 / Example unspliced isoform:CAAAAAGGAAGTGCAAATCTCATATTCTCGAGCACACGCCTTTAAATAGTTGAACCTAAACTGGTTCTCTCTAGGACCGAATTTGACATGAGATTTTCGCGCTGGCCGTTTAAGTCCCACCTCAAAACCCTCGCATATCATCATGCAAGCCTTTAAGCAGCGCGCCACCACAATAGGATTCCGAGGAGTTCTATTACTCC
AGAGCGTTTTCATTTCAACCGGATGCCCCCACAAACTATCCGAGCATACCGGTCTGCCTGCAGACGCCAGGTTTCCTATTTTCAGGGGGCGTTTTTCCGGACAGAATAGCTTGAATGACACAGCGGAGTTCGGTTGGTCGGGGTGTCGTGGCAGAAGAAATATCAAAAATCATTTCGGTCCCATTTCTGTTGACGAGAAG
ACGTCGAATGTTAGTATGGAAGGAGGAAATCAATACTCTGTTATTAAAATCGACGATTCCGGCAACTACCAGCCAATGCTTCTCAATATCACGGAGCTTGAAAGGGCTACATAAATCACAACTTCTCTCACCAAAAATATGTGTCTCACGCCAAGAGGCTTTGCAAAAAGAAAGGGAAGCTTTTGCATTGTCTATGGCTG
AGTATGCAAAGAGAAATACCTCTACTTTACAAGAGTCAATTCCATTTCACCTTCGGATGATAGAGTGTATGCTTGAAGAAACATGCAATTTTTTTCATCAAAAGGTTGAAAGGTTGAAGATAGTGGTAGAGAAAGTTCTGGAGGATCTGACATATGATGTTAATATGGGAGGGTTGCAGAGATTGCTACCTCTTAAGAGA
GTCCTGACTGAAGTGGAGCATGATATCTCCGACACACATGAAGCTATAGAGCAGGTTTTGGAAAGTGACGATGCTCTGACCGCCCTCTTGCTTGAGCACTGGGAGAATCCCACAACATCATCTGGGACCGGGTCACAACATTTTTCAGAGCAAGATCAGGGTCGGGATAAGCTTCGTCGAGCAGCTGCAGACATCATACT
GACATATCAACGCCAGGTTGATGATGCAGGGGGTGTGGTTGAAGAGCTAAGGAAAGGTATTGATTCAGCACAAGAGGTCTGGGAGCTTACACTAGATACAACAAGAAATAAAATAATACGCATGAACCTTTTTATTTCAATGGCGACACTATCTTTCAGCTTAGCCGCTGTTCCTGCAAGCTTCTTTGGAATGAATCTGG
TTAGTGGACTGGAGACTTCACCTCATGCATTCTATATCATTTTAGGAGCAGCATCTTCATCTTCAGTTTTTGTTGGCGTGGGACTTTTTTTAATGTTCCGTAAATTTCTTGAGGGGCATCGTGCACAGGATCTTGCAGCTTTACAGGATCTTCTGCGTCACATTGATGATATAGATGAAATTTTCCAGGCCTTGAAATCG
AAAGGTTCTGCAGTAAGTGAAGAGGAGTTGAAGAAGCTTCTTCGTTCACATCCCTCTATTGGATCAATGCAAGAGAGAGAGATTGACTTGATGATACGTATGTTTGACAACCACCGAAACAGCCAACTTGAGACTCGCGAGTGGAATGCAGTGTCAAGGCAACAGTCAAAAGCAAGGGCACAAGGCTGAATTTACAACAT
GAGTATTTTCTAGAGCCAGCGTATCAAAGATTCAGTGTTTATGTTTCTACACATTTAATACATCCAGATATACACTCCCTCTTCGGCAGAATTGACAAACTCTGAAGCAGGAATGCCTTCCTGGGAGTAATGTATGAATATGgtaattcatttgattctgcaatagagaaacgattaaaaagatatagaataatcgtaat
attgtatccaaacaaattctcatcatatgattttcttgtcagcagGATGATCAGGCATTTTGAAGACTGCTTGTGGATGGAGATAAAACTCTAGGGGTTATAAATTGCATTATCTTTTAAGTTGGCAACATCTTTCTTCTCCTAGAGATGATTTTAGTAGAATTTTGTGCATTTATTATGGTTTCAATCAATTATTTGCA
TATTGTTCCTGAATTTCAACGCTTGATGAGATTGCCGTCATTTTGGTTAGACTTGAAGCCTTAGCTGTGTTTTCATCACAGATGTGAATCTGCAGTGAATACCTGGTAATGATTAAATCATTGGTGTGCACACCTCCATGTGCATATATAAACATTAAGTTGAATCTTTCAAAGGTAATTGATGGCAGATGCCCAGGTTC
CCTGTTGTTTGTTAATAATAAATATTGGAAGGGAAATAACTTATATGATATGTGAAATTACAAACAATTTTTGCGGTAATTGTCACCCATTTTAGTCCAAATATTTTTTTTATAGAAGTGAAATGGTTTTTGAGTATGCAAAATATGAACAATTTTTGTGGAATCTTGCACCGCCAATCCCTTACGTTACAGTGTTGGAC
TCCATGTACATACATGCAGAAGTAAAAGAACAAGCATAGTTTTGTAACTCCTTTTGTTTGAATCACTCTTTGAATCAGTACATAAAATACTTTGGTAGAGAGCCATGGGAAATTGGCTGGGGTTTAAATGCGTACTCTTCATTATCTTCTGGACATGTGGAGGTAATCAATGTCAATTTTGAGCAGAATATGACTGGCCT
ATATCTTTGTTGATTTGCATCAGAAGTATCTCTAATACGCATACAAGCGTAGCCATTTTATTTTAAGCATCGAGTGC