sp|A4UHT7|SALR_PAPBR ----> Salutaridine reductase
Intron 1 GTAAGTTCAG ... AGGGTGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 13.33 | 39 | 6.7 | 6 |
| A2 | 25 | 12 | 0 | 4 |
| A3 | 14.29 | 12 | 2.3 | 2 |
| A4 | 29.03 | 22 | 4 | 9 |
| A5 | 0 | 12 | 1.3 | 0 |
| A6 | 21.5 | 84 | 11.3 | 23 |
| A7 | 20.98 | 113 | 11.3 | 30 |
| A8 | 22 | 78 | 8 | 22 |
| A9 | 14.94 | 74 | 8.7 | 13 |
| A10 | 24.77 | 82 | 16 | 27 |
>TRINITY_DN35860_c0_g1_i3 from sample A6 / Example spliced isoformTATTTACTAAAATGATGTTATAATTTACTTCTATAAACCACTAGCTAAGTTTTCCAATTTTTCCAAAACTAAGTTGACTAATTCAACCACTATTTCTGTTCTATACTCTCTTCAGAGACATTCTCAATAGTATGCCAAATATGTGCCTTTTCCAAGATTCATTGTCGAAACCTGTGAAAGCAATGCCAGAAAGGTAACTT
GACTGATTGTTATGGAGGCGCCACATTTATCATCTGGATCGGATCGGGAAAAATGGTGGACGGAGAAGACTGTGGCTGTGGTGGCCGGATCGAGCAGGGGTATTGGCTTGGAAACTGTTCGTCATCTGGCAAAACAAGGTCTCACTGTTGTTCTGACTGCCCGTAATCATGCCAACGGCTTGGCCATTGCAAAATCTGTT
GTAGATGAAGGATACCCAAATGTTCATTTCCATCAGTTAGATGTGCAGAGCGATCAAAGTGTGTCGCTCTTGGCCGATTGGCTTCAAAACAAATTCGGTGGCATCGATATTCTGATAAATAATGCTGGAGTGATTGGAGCGGAAATAGATTGGGATTTCTGGGAGAGTCGCGGCATCAGTCGCCTAGCGCTATTGAGCAA
CCGATCTTTCACAGAGGGTTTCAATGAGGATTACGAGAATGCAAAGGCATGCGTGGATACAAACTACTTGGGCACCAAGAGAATGGTGAAAGCGCTGCTTCCTCTGTTGAAGCCATCATCCTCCGGATCCAGAATCGTGAATGTCTCATCAACTGGGGGATTGCTTCAGAATCTGGGAAACGAGACTCTGAGAATGCAGC
TTGCCGATGTCAAAAACCTGAGTGAAGAAACGATAGATGGGTTTATCGACATCTATCTGAATGACGAGAAATCGGGAGAGATTGAAGGCAAGGGGTGGCCTGCTCGACTGAGAGCGTACATTGTATCCAAGATAGCCCTCAATGCCTACACTAGGCTTGTGGCAAGAGATCTTCAAAAGCATGATGATGATCACAAGGTG
TATGTGAACTGCTTGCATCCTGGCAGCTTCATCAAAACTGATATGACAGGCCAAGGAGGAGATATGTTGGCAGCTGAAGCTGCAGCTTATGTAGCGAGGGTTGCCCTTCTCCTGCCGGGAGGACCTTCAGGTCAATTTTTTGACAAAGAAAAGCTTTTTACTTCATTCTAGTTTGATGTATGGAGCCATGGCCTCTTCGT
ACATAGTCATGGCCTCAGCTTTAGGCAAGTATTCGCTTTATGAGTGTGAGCAAGTATTTATTTTGATTAATTTAGTATGTAAATCGACCAGTGTGAAATGGGAAAAGATCACCTCTTTCAACCTTGCTTTAATTAACCATCTTCTATTTATTTTGATTAATTTAGTA
>TRINITY_DN35860_c0_g1_i5 from sample A6 / Example unspliced isoform:TATTTACTAAAATGATGTTATAATTTACTTCTATAAACCACTAGCTAAGTTTTCCAATTTTTCCAAAACTAAGTTGACTAATTCAACCACTATTTCTGTTCTATACTCTCTTCAGAGACATTCTCAATAGTATGCCAAATATGTGCCTTTTCCAAGATTCATTGTCGAAACCTGTGAAAGCAATGCCAGAAAGGTAACTT
GACTGATTGTTATGGAGGCGCCACATTTATCATCTGGATCGGATCGGGAAAAATGGTGGACGGAGAAGACTGTGGCTGTGGTGGCCGGATCGAGCAGGGGTATTGGCTTGGAAACTGTTCGTCATCTGGCAAAACAAGGTCTCACTGTTGTTCTGACTGCCCGTAATCATGCCAACGGCTTGGCCATTGCAAAATCTGTT
GTAGATGAAGGATACCCAAATGTTCATTTCCATCAGTTAGATGTGCAGAGCGATCAAAGTGTGTCGCTCTTGGCCGATTGGCTTCAAAACAAATTCGGTGGCATCGATATTCTGATAAATAATGCTGGAGTGATTGGAGCGGAAATAGATTGGGATTTCTGGGAGAGTCGCGGCATCAGTCGCCTAGCGCTATTGgtaag
ttcagtctcattaatattcttgctgagatgttttactgggtgaatccttaaaacagtcaactcgtatattcatcttatttctgaaaggaaagttttcaaagattgtggtcaatctgcgttgctgcttcgtgcttctttaactttgaatatataaaaagattaaaggtttcaacagtggatgtaccggttttttttaaatg
gggcttgcaatttatggtagtgatgtatatataatttcatccatggtgacgttgagggtggcagAGCAACCGATCTTTCACAGAGGGTTTCAATGAGGATTACGAGAATGCAAAGGCATGCGTGGATACAAACTACTTGGGCACCAAGAGAATGGTGAAAGCGCTGCTTCCTCTGTTGAAGCCATCATCCTCCGGATCCA
GAATCGTGAATGTCTCATCAACTGGGGGATTGCTTCAGAATCTGGGAAACGAGACTCTGAGAATGCAGCTTGCCGATGTCAAAAACCTGAGTGAAGAAACGATAGATGGGTTTATCGACATCTATCTGAATGACGAGAAATCGGGAGAGATTGAAGGCAAGGGGTGGCCTGCTCGACTGAGAGCGTACATTGTATCCAAG
ATAGCCCTCAATGCCTACACTAGGCTTGTGGCAAGAGATCTTCAAAAGCATGATGATGATCACAAGGTGTATGTGAACTGCTTGCATCCTGGCAGCTTCATCAAAACTGATATGACAGGCCAAGGAGGAGATATGTTGGCAGCTGAAGCTGCAGCTTATGTAGCGAGGGTTGCCCTTCTCCTGCCGGGAGGACCTTCAGG
TCAATTTTTTGACAAAGAAAAGCTTTTTACTTCATTCTAGTTTGATGTATGGAGCCATGGCCTCTTCGTACATAGTCATGGCCTCAGCTTTAGGCAAGTATTCGCTTTATGAGTGTGAGCAAGTATTTATTTTGATTAATTTAGTATGTAAATCGACCAGTGTGAAATGGGAAAAGATCACCTCTTTCAACCTTGCTTTA
ATTAACCATCTTCTATTTATTTTGATTAATTTAGTA
Intron 2 GTACGTTTGG ... CTGTTTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25 | 21 | 4 | 10 |
| A2 | 24.32 | 14 | 5 | 4 |
| A3 | 16.28 | 18 | 2 | 5 |
| A4 | 29.41 | 24 | 7 | 13 |
| A5 | 23.08 | 15 | 2 | 7 |
| A6 | 22.92 | 37 | 8 | 14 |
| A7 | 21.31 | 48 | 5 | 21 |
| A8 | 22.58 | 24 | 4 | 10 |
| A9 | 14.06 | 55 | 2 | 16 |
| A10 | 22.29 | 61 | 10 | 25 |
>TRINITY_DN84432_c0_g2_i1 from sample A4 / Example spliced isoformCCAAAACTAAGTTGACTAATTCAACCACTATTTCTGTTCTATACTCTCTTCAGAGACATTCTCAATAGTATGCCAAATATGTGCCTTTTCCAAGATTCATTGTCGAAACCTGTGAAAGCAATGCCAGAAAGGTAACTTGACTGATTGTTATGGAGGCGCCACATTTATCATCTGGATCGGATCGGGAAAAATGGTGGACG
GAGAAGACTGTGGCTGTGGTGGCCGGATCGAGCAGGGGTATTGGCTTGGAAACTGTTCGTCATCTGGCAAAACAAGGTCTCACTGTTGTTCTGACTGCCCGTAATCATGCCAACGGCTTGGCCATTGCAAAATCTGTTGTAGATGAAGGATACCCAAATGTTCATTTCCATCAGTTAGATGTGCAGAGCGATCAAAGTGT
GTCGCTCTTGGCCGATTGGCTTCAAAACAAATTCGGTGGCATCGATATTCTGATAAATAATGCTGGAGTGATTGGAGCGGAAATAGATTGGGATTTCTGGGAGAGTCGCGGCATCAGTCGCCTAGCGCTATTGAGCAACCGATCTTTCACAGAGGGTTTCAATGAGGATTACGAGAATGCAAAGGCATGCGTGGATACAA
ACTACTTGGGCACCAAGAGAATGGTGAAAGCGCTGCTTCCTCTGTTGAAGCCATCATCCTCCGGATCCAGAATCGTGAATGTCTCATCAACTGGGGGATTGCTTCAGGTGAAGTATTTTAATGATAAAAACTCC
>TRINITY_DN84432_c0_g2_i4 from sample A4 / Example unspliced isoform:CCAAAACTAAGTTGACTAATTCAACCACTATTTCTGTTCTATACTCTCTTCAGAGACATTCTCAATAGTATGCCAAATATGTGCCTTTTCCAAGATTCATTGTCGAAACCTGTGAAAGCAATGCCAGAAAGGTAACTTGACTGATTGTTATGGAGGCGCCACATTTATCATCTGGgtacgtttggatgtcccatgtgctt
tgtctgtttcgtttcgtttcatggatacctacctcgttatttcactttcatggattcttacatacctgatggttgatgatacttattatctcttatgaatcgaatcaatgtgtctgtttgaagATCGGATCGGGAAAAATGGTGGACGGAGAAGACTGTGGCTGTGGTGGCCGGATCGAGCAGGGGTATTGGCTTGGAAA
CTGTTCGTCATCTGGCAAAACAAGGTCTCACTGTTGTTCTGACTGCCCGTAATCATGCCAACGGCTTGGCCATTGCAAAATCTGTTGTAGATGAAGGATACCCAAATGTTCATTTCCATCAGTTAGATGTGCAGAGCGATCAAAGTGTGTCGCTCTTGGCCGATTGGCTTCAAAACAAATTCGGTGGCATCGATATTCTG
ATAAATAATGCTGGAGTGATTGGAGCGGAAATAGATTGGGATTTCTGGGAGAGTCGCGGCATCAGTCGCCTAGCGCTATTGAGCAACCGATCTTTCACAGAGGGTTTCAATGAGGATTACGAGAATGCAAAGGCATGCGTGGATACAAACTACTTGGGCACCAAGAGAATGGTGAAAGCGCTGCTTCCTCTGTTGAAGCC
ATCATCCTCCGGATCCAGAATCGTGAATGTCTCATCAACTGGGGGATTGCTTCAGAATCTGGGAAACGAGACTCTGAGAATGCAGCTTGCCGATGTCAAAAACCTGAGTGAAGAAACGATAGATGGGTTTATCGACATCTATCTGAATGACGAGAAATCGGGAGAGATTGAAGGCAAGGGGTGGCCTGCTCGACTGAGAG
CGTACATTGTATCCAAGATAGCCCTCAATGCCTACACTAGGCTTGTGGCAAGAGATCTTCAAAAGCATGATGATGATCACAAGGTGTATGTGAACTGCTTGCATCCTGGCAGCTTCATCAAAACTGATATGACAGGCCAAGG
Intron 3 GTAAGTTCAG ... ATTGCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 60 | 6 | 5.5 | 9 |
| A2 | 84.62 | 2 | 0 | 11 |
| A3 | 57.5 | 17 | 2 | 23 |
| A4 | 60.71 | 11 | 3 | 17 |
| A5 | 50 | 3 | 1 | 3 |
| A6 | 65.71 | 36 | 9.5 | 69 |
| A7 | 62.63 | 37 | 8.5 | 62 |
| A8 | 58.54 | 34 | 6 | 48 |
| A9 | 67.65 | 22 | 6.5 | 46 |
| A10 | 59.38 | 39 | 12.5 | 57 |
>TRINITY_DN35860_c0_g1_i4 from sample A6 / Example spliced isoformTATTTACTAAAATGATGTTATAATTTACTTCTATAAACCACTAGCTAAGTTTTCCAATTTTTCCAAAACTAAGTTGACTAATTCAACCACTATTTCTGTTCTATACTCTCTTCAGAGACATTCTCAATAGTATGCCAAATATGTGCCTTTTCCAAGATTCATTGTCGAAACCTGTGAAAGCAATGCCAGAAAGGTAACTT
GACTGATTGTTATGGAGGCGCCACATTTATCATCTGGATCGGATCGGGAAAAATGGTGGACGGAGAAGACTGTGGCTGTGGTGGCCGGATCGAGCAGGGGTATTGGCTTGGAAACTGTTCGTCATCTGGCAAAACAAGGTCTCACTGTTGTTCTGACTGCCCGTAATCATGCCAACGGCTTGGCCATTGCAAAATCTGTT
GTAGATGAAGGATACCCAAATGTTCATTTCCATCAGTTAGATGTGCAGAGCGATCAAAGTGTGTCGCTCTTGGCCGATTGGCTTCAAAACAAATTCGGTGGCATCGATATTCTGATAAATAATGCTGGAGTGATTGGAGCGGAAATAGATTGGGATTTCTGGGAGAGTCGCGGCATCAGTCGCCTAGCGCTATTGAATCT
GGGAAACGAGACTCTGAGAATGCAGCTTGCCGATGTCAAAAACCTGAGTGAAGAAACGATAGATGGGTTTATCGACATCTATCTGAATGACGAGAAATCGGGAGAGATTGAAGGCAAGGGGTGGCCTGCTCGACTGAGAGCGTACATTGTATCCAAGATAGCCCTCAATGCCTACACTAGGCTTGTGGCAAGAGATCTTC
AAAAGCATGATGATGATCACAAGGTGTATGTGAACTGCTTGCATCCTGGCAGCTTCATCAAAACTGATATGACAGGCCAAGGAGGAGATATGTTGGCAGCTGAAGCTGCAGCTTATGTAGCGAGGGTTGCCCTTCTCCTGCCGGGAGGACCTTCAGGTCAATTTTTTGACAAAGAAAAGCTTTTTACTTCATTCTAGTTT
GATGTATGGAGCCATGGCCTCTTCGTACATAGTCATGGCCTCAGCTTTAGGCAAGTATTCGCTTTATGAGTGTGAGCAAGTATTTATTTTGATTAATTTAGTATGTAAATCGACCAGTGTGAAATGGGAAAAGATCACCTCTTTCAACCTTGCTTTAATTAACCATCTTCTATTTATTTTGATTAATTTAGTA
>TRINITY_DN35860_c0_g1_i5 from sample A6 / Example unspliced isoform:TATTTACTAAAATGATGTTATAATTTACTTCTATAAACCACTAGCTAAGTTTTCCAATTTTTCCAAAACTAAGTTGACTAATTCAACCACTATTTCTGTTCTATACTCTCTTCAGAGACATTCTCAATAGTATGCCAAATATGTGCCTTTTCCAAGATTCATTGTCGAAACCTGTGAAAGCAATGCCAGAAAGGTAACTT
GACTGATTGTTATGGAGGCGCCACATTTATCATCTGGATCGGATCGGGAAAAATGGTGGACGGAGAAGACTGTGGCTGTGGTGGCCGGATCGAGCAGGGGTATTGGCTTGGAAACTGTTCGTCATCTGGCAAAACAAGGTCTCACTGTTGTTCTGACTGCCCGTAATCATGCCAACGGCTTGGCCATTGCAAAATCTGTT
GTAGATGAAGGATACCCAAATGTTCATTTCCATCAGTTAGATGTGCAGAGCGATCAAAGTGTGTCGCTCTTGGCCGATTGGCTTCAAAACAAATTCGGTGGCATCGATATTCTGATAAATAATGCTGGAGTGATTGGAGCGGAAATAGATTGGGATTTCTGGGAGAGTCGCGGCATCAGTCGCCTAGCGCTATTGgtaag
ttcagtctcattaatattcttgctgagatgttttactgggtgaatccttaaaacagtcaactcgtatattcatcttatttctgaaaggaaagttttcaaagattgtggtcaatctgcgttgctgcttcgtgcttctttaactttgaatatataaaaagattaaaggtttcaacagtggatgtaccggttttttttaaatg
gggcttgcaatttatggtagtgatgtatatataatttcatccatggtgacgttgagggtggcagagcaaccgatctttcacagagggtttcaatgaggattacgagaatgcaaaggcatgcgtggatacaaactacttgggcaccaagagaatggtgaaagcgctgcttcctctgttgaagccatcatcctccggatcca
gaatcgtgaatgtctcatcaactgggggattgcttcagAATCTGGGAAACGAGACTCTGAGAATGCAGCTTGCCGATGTCAAAAACCTGAGTGAAGAAACGATAGATGGGTTTATCGACATCTATCTGAATGACGAGAAATCGGGAGAGATTGAAGGCAAGGGGTGGCCTGCTCGACTGAGAGCGTACATTGTATCCAAG
ATAGCCCTCAATGCCTACACTAGGCTTGTGGCAAGAGATCTTCAAAAGCATGATGATGATCACAAGGTGTATGTGAACTGCTTGCATCCTGGCAGCTTCATCAAAACTGATATGACAGGCCAAGGAGGAGATATGTTGGCAGCTGAAGCTGCAGCTTATGTAGCGAGGGTTGCCCTTCTCCTGCCGGGAGGACCTTCAGG
TCAATTTTTTGACAAAGAAAAGCTTTTTACTTCATTCTAGTTTGATGTATGGAGCCATGGCCTCTTCGTACATAGTCATGGCCTCAGCTTTAGGCAAGTATTCGCTTTATGAGTGTGAGCAAGTATTTATTTTGATTAATTTAGTATGTAAATCGACCAGTGTGAAATGGGAAAAGATCACCTCTTTCAACCTTGCTTTA
ATTAACCATCTTCTATTTATTTTGATTAATTTAGTA