sp|Q8S2T0|GRIP_ARATH ----> Protein GRIP
Intron 1 GTAAATATTG ... TCTCGTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 15.02 | 62.8 | 11 | 0 |
| A2 | 26.83 | 52 | 19 | 0 |
| A3 | 13.84 | 50 | 8 | 1 |
| A4 | 16.94 | 34.5 | 7 | 0 |
| A5 | 14.17 | 12.3 | 2 | 0 |
| A6 | 12.95 | 6.8 | 1 | 0 |
| A7 | 28.99 | 44.3 | 18 | 0 |
| A8 | 10.6 | 33.8 | 4 | 0 |
| A9 | 20.61 | 46.3 | 12 | 0 |
| A10 | 10.7 | 50.3 | 6 | 0 |
>TRINITY_DN115669_c8_g2_i1 from sample A3 / Example spliced isoformATGAGGCTTACACAAAAGGAAATTCAATGTCATGCTAATCTGGAGATGCTTACTGCACGATTTCTTTTAAGCCTACGCTAAAAGAGATCGTGCTTTGAAAGCTCTTCAGGTTTCTGTCAAAAATCATGAAACTGAACTTGCAACGAGGGCCGTAGCTCTGATAGATGCAGAACAGAGGATTAAAGACATGGCAATGAAAC
TTGAGTCCACAAAAGCTCATTTGCGATCAGAACAAGAAGCTTGGCAGAGTACTCTCTCAAATGTCCAAGAAACATGGCGCGTAAAATATGAGGCTCTAGAGGCTCAAACAAATAAAACGGCTATAACAGGTTTGGATGAGGACCTAGAATCATTCAGGATGAACTATGAGAAACTTAAGGAGGAGCATGATTCCTTTCGG
GAGATGGCTAACAACATCATTGAGGCGAAGGACAATGAAATTTCTCGCCTTTTAGATGATAATAACAACCTGCAAAGATCACTGCGTGCAAATCATCTGGTGGAGAAAGACCGTGGCAGTAATCAAGCTTCAGTACAACAAGATTCATCTGTATCTGTTGTTGCAGTGGCAGAGCAACAAATTTTGCTCCTAGCCAGGCA
ACAAGCCCAAAGGGAGGAGGAGCTTGCTCAGCGTCAGCGACATATTGAGGCCCTTCAAGAAGAGATTGCTGAGCTTGAGCGTGAGAATCGTCTCCACCATCAACAGGAAGTGATGCTTAAGGGTGAATTGCGGAACATGGATAGGGTTCAGAAGCGTGGTGGTGTGGATATGACATATCTGAAGAATGTTATTTTGAAAT
TGCTTGAAACTGGAGAAGTTGAGGCTCTCCTCCCAGTCATTGGAACGTTACTGCAGTTCAGCCCTGAAGAGATCAAGAAATGTCACGAGACCTATAATGCTCTACCAAATGTACCTCTAAGTGGTGCTGCAGCTGTGGTTGATGCTGCAGCCTCCGGACCACGCTCCTTTTTCTCAAGATTTACACTTTGAAGTGTAGGA
TAAATGGAGTATATTGTATTCTTGTGCATTGGCTACTCTGATCTTTGTTGCATAATGCATCACTTCCTTGGCAATGATCTGTCTTAAGATAGTTTCTTCATGGGAAAATTAATGAAC
>TRINITY_DN115669_c8_g2_i4 from sample A3 / Example unspliced isoform:TTTACTTCCCCTTCTTCTCTATTATTGTCTATTATTTTAGTGCACACAATTCTTCAAAATTTCTTATCCTATTCACGTGCACACAGATTATCATTTTCCTTCTAGATATATTATCTTACTGTCCATAGTTTTTGGGCCTTTCTCTCTTGCTTTTTCCATGTTAAGTAAATGTTCTTAAACATGTCTATGCTTGTATGCTG
GAAAACAAGTAGAGCTTTAAATGTAATATGTGCTCATGTCTTTGTTTCCTTTTAGGGCCGTAGCTCTGATAGATGCAGAACAGAGGATTAAAGACATGGCAATGAAACTTGAGTCCACAAAAGCTCATTTGCGATCAGAACAAGAAGCTTGGCAGAGTACTCTCTCAAATGTCCAAGAAACATGGCGCGgtaaatattgc
agcttcccttgcaattacttaatttaacctttttattattattgaaaatacatcttatatgatgaggctgattcaattaacttttaaacttgttttgttttgagacctaataaatagacatacaaattctattggacttacaaaatttcactgtattctcgtgaagTAAAATATGAG
Intron 2 GTATATTGTA ... TTCTGCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 43.31 | 40 | 26.2 | 35 |
| A2 | 45.54 | 23 | 19.4 | 19.1 |
| A3 | 32.17 | 45 | 24.9 | 18 |
| A4 | 27.74 | 35 | 18 | 9 |
| A5 | 52.09 | 5 | 3.9 | 7 |
| A6 | 46.57 | 29 | 24.5 | 26 |
| A7 | 37.47 | 60 | 36.2 | 36 |
| A8 | 36 | 90 | 41.4 | 60 |
| A9 | 32.19 | 50 | 27.6 | 20.1 |
| A10 | 41.95 | 37 | 34.7 | 19 |
>TRINITY_DN128077_c3_g1_i14 from sample A1 / Example spliced isoformCTCATCTCTTTCACGCACTAACCTAGGAAAATCTCACACAAAAACCACGGGAAAAACAGTGTAAGAGAACATACGCTTATTTTAGTCCAACTCTGGTTCTGTGCCCCCTTCTGATTTGGATACATAATTCGGTCGACGTGTAGCTGAAGGCGCTGGAACTTAAAAACGTCCATCGGTCACACGGTCGAATCTCATACAAG
CTTCCTATACAAACCCCACACTACAAGACGAGGCTGCAGTGCAGAATTCACTTAGACCGCGGGACAAAGTTCACAATTTATGCATCCCGGACATTCACACGTGGTCATCCTTGACGCTGTACGCTACAAGAATCTCGATCTACAGAAATAATGTAAAGGAAGAGCTGCATTTACCTCGGATCTGCCCCGGCATTCTCAAA
TACCCCTCTAATTTGCGAGGATTCATTACCATCTCCATGAAATTTACAGAATTTTAGCAGAGATTTGCTGGAAATTGTTAAAAGTCGTTCAACAATGACGTCGAGAGAGGCAGCTTTAGAGGAAGAGAATGCAAAGCTAGTGGCCGAAATGGCTTCAATGAAGAAGAAAATAGTGGTGCATCTCAAGAAACAGCAAGCCG
AGCTCCAGGCTAAGCTTCAGGCTGCGGAATCCCGGGCTGCAGCGGCGGAAACCGCCCTTGCTGCCTCTTCCAATAATGCAAATTCAGTGGATAACGAACAAGTCAGCAAATTGAAGGCCGAATTGGAGGATGAAAAAGAACGGAACCGGAAACTGGAAGAATCAACAATTGCGGAGAATAAAAGACTGGAGGCTCAGATA
CAGCAGCTTAAGAAAGTTTTGGAGGAAGAATCAATCAAAAGGGATGCAAAAGAGAAGCTGCTGGAAAAGGAACTAAAGGATAGTCAGGACAGTGCACAGAAGCAGATAGGAGAGTTGATACTGATAAATGAAAAGTTGGAAGCTCAGCTTCTTGCAGCAGCTGGGCAGGTCTCTGAAGCATTTACAAGGATTTCTTCAAC
TCAAGATGACATGGAAAGAATTTCCAAGGAAAGTCATGAAACAAGTCACGCACATGCAAAATTGATAAAGGAACACGAGAGGTTATCTAATGAATTGGAAAAGGCACGTGCTTCCTTGACTCGAGCAGAGAAAGATATTGAGGGCAAGACAAAGGAGATTGAAGAAATAGCAGCTGCAAGGAAAGTTGCTCAAGAGGGGC
ATACTGCTGCAGTGGACCAACTTATGCAGCGCCTTAGTGAGGTTGAAAGTGGTAAACTAGAAGTAGTTGTCGAAGAAAACAAAAAGTTGTCTGAACAATTACAAGAAAGCAATACAGCAGTTAGAAAGTTGCAGGACCATTGTACAGAAGTTCAGAAGTGCTTGCTTGAATTTGAACAGGGGGGCAGTCGATCTATGTAT
CAGCAAACAAACAAAAATTATGCTCTTGATAGTAGTAATATTGCAGGTGGTCATGACAGGGAGTTGCTTGTAAAAGCTATTTATGATCTTAATTTTCAGAATGAATATTTGAAATCACAGCTTCAAAACTTTTATGCCCAGACCACTGAATATGGCAGTCTAGAAGAGTACACTGAACAGTCGAAAGGAACTGATGCAGA
AATTCGTCTAGATGCTCTTAGAGATTTGGAGAAACAGATATCAGTTTTGAATGAACAACTTGCAGAAAGCAGAATGTTACAAGCTACTGCAGAGAATCACATGAAACAATTTCAGCAGGCATGCACGGAGTCAGAGCAAAGGTTTCAAGATCTTTCTGCACAGCTTTCTGAAGTCCGGGAAAAAATGGAGAATGAAATAA
AGGGGCGTGATGAGAGATACATGGAGCTTGATGCAAAGTTTGTGCGTTTGCAAAAACGAGCAAAGCAGAAGATACAAGAACTTCAGAAGGAGAAAGAAGATGTTGAGGTTCAGCTTTCTATTGCAAGTGAGAAAGCTTCACAGGCCATGGCACAGCAATCTATGATACAAGAGGAACTGGAATGCACTCGACGTCAGGCG
GGTGAAGCGCTGCGGTCCTTAGATGGGGAGAAGCAGCAATTGCGCATTGCTAATAGTAGGCAGAAAGAGACTCTTGAGGAGCTGCGTCGAACGTTGGAAGCTAGGGAGCATGATATAGAAGAATTGAAGCAGTCTCTTTCTGAGAAAGATCAGATGTTGCAAGATACAGAAGTTTCATTAAAAGTCATGGATGAAAAGCG
CCAAGCTTCCCTCTCTGATTATGCTACGAAACATCAAAAGCTTGTGGAGAGCTTTGAATCTCAGTTGGCTGATGCAAACTTGGAAAGGAGCAAAGCAGCTGAGGCAATATCAAAGCTACAGGAAGAGCTGGCTGACAGAGAATCAAAGTTTGCAGAGTTGGAGGCAGCTTCTACGGGTGAGGCAGTGAGGCTTGGAGTTG
CTTTGGATTCAGCAAAAGGAGAGGTTATTCGTGCTAAGCAAGAGCATCAAAAGGAGAAGGAAAGCTGGGAGGCTGCACTACAAACAATGAAAGCTAAGCTTGAAGAGTCAGAAAAGGCCTGCTTGCAATATGAGATTGTTGTAGCAAAGACAAGAAGCCAATTGGAGTCGGAGTTGGCAGGATTACAGCAGGCCCTTAAT
GGAACTAAAGAAGAACTTGAATCTAGTAGAGGAGAGCTTAGTCGTTTAGAAGCTGACTTTAAAGCTTACAAGAATCGCGCTCATGCTCTTCTTCAAAAAAAGGAAGCCGAGCTGTCTGCTGTAAAGGATATGGATCTTGTAGCAGCTCAAGAGGCTGCCTTAAAGGAAGCCCAAAGAGATGCAGCTTTAGCCTACGCTGA
AAGAGATCGTGCTCTGAAAGCTCTTCAAGATTCTGTCAAAAATCATGAAACTGAACTTGCAACGAGGGCCGTAGCTCTGATAGATGCAGAACAGAGGATTAAAGACATGGCAATGAAACTTGAGTCCACAAAAGCTCATTTGCGATCAGAACAAGAAGCTTGGCAGAGTACTCTCTCAAATGTCCAAGAAACATGGCGCG
TAAAATATGAGGCTCTAGAGGCTCAAACAAATAAAACGGCTATAACAGGTTTGGATGAGGACCTAGAATCATTCAGGATGAACTATGAGAAACTTAAGGAGGAGCATGATTCCTTTCGGGAGATGGCTAACAACATCATTGAGGCGAAGGACAATGAAATTTCTCGCCTTTTAGATGATAATAACAACCTGCAAAGATCA
CTGCGTGCAAATCATCTGGTGGAGAAAGACCGTGGCAGTAATCAAGCTTCAGTACAACAAGATTCATCTGTATCTGTTGTTGCAGTGGCAGAGCAACAAATTTTGCTCCTAGCCAGGCAACAAGCCCAAAGGGAGGAGGAGCTTGCTCAGCGTCAGCGACATATTGAGGCCCTTCAAGAAGAGATTGCTGAGCTTGAGCG
TGAGAATCGTCTCCACCATCAACAGGAAGTGATGCTTAAGGGTGAATTGCGGAACATGGATAGGGTTCAGAAGCGTGGTGGTGTGGATATGACATATCTGAAGAATGTTATTTTGAAATTGCTTGAAACTGGAGAAGTTGAGGCTCTCCTCCCAGTCATTGGAACGTTACTGCAGTTCAGCCCTGAAGAGATCAAGAAAT
GTCACGAGACCTATAATGCTCTACCAAATGTACCTCTAAGTGGTGCTGCAGCTGTGGTTGATGCTGCAGCCTCCGGACCACGCTCCTTTTTCTCAAGATTTACACTTTGAAGTGTAGGATAAATGGAATGAACATCAATTGACATCATAGAGCATCTACAGACTGTATTAAGAAATGGCTGGCTTGTAGACATTACTTTG
TAAATGTGTCAAAGTGTTGAAGCTGTGTTGTGATTCCTGTTACCATGTTTACTCTATCAACAGCAGTGGCCTGCATGAAACGGGGGCTTATTATCACGAGGTTATCTAAGCAATCAGTTATATGGCATTCAGTTTCACACTCTAATTACAATAGCTTACGTCAATTGAAAAGTGATTTGGGGCAGGTTATGTCTGTGGCC
CCATGTAATCCACGCCTGTGCAGAGGATGAGTTCATTGCTTCAAATTTTCTGGACTCCTGGACTGGCTTCAGCTACTGGTTCCTTACTACCAAGTCGGGATTTTCTGAAGTTTTTGAAAACATTTCTTCAAAGATTATTATCCTAGTTAACCATGGATGACTGGTTCATCTCCTGTATACTAACATTATTTGGACAGCAG
TGTGTTCATCACTAGCATGTAAAGCTTATATCAGCTATGTCCCAGGGAGTTAAAATTGTGAGATAACGGTATGTTGGATCAGCTGGCATACTCGAAAAAACGATTATCCATTTCAACAGGCATTCGAACTTCTCAATTTCTAAGAAATTCGATTCTTTTAATTCATACCATTTTCTGCACCTCTTAACCCAACAATGCAT
GTAAGAGGTCAATAAAAGTATGAATTTGAATTATTGCATTGACCCGTATTTAAACTTGGAAGGATACGACCAATTATGGATTCCCAGCATACCTCAAGTCCGTGTGTGTTCCCATTACAAGTACAAGGGTGGTCATTTGTTTTATTCTAGTTTCTTTCCTGTACTTGAGGATTTGTTTTATGTAAAGATGTTGGATGTTG
TTCATGGCAGATGCCTGCAGCCTGACAACGATGCATTGAATGTAAAGAAACTATGTGGAAAGTCACAGTGGGCGTATAATTTGTACAATTTGTTTCCCTCGATCATGTCTAGGGTTTCCATGGAATAGATGACTAATGGAGTACCTGTGTTTGTAGAAAGGACTTGTCAAGGTTCACTATTGGAGTTAACAGAATAAAAT
AATTTTTGAAGTTGTCAGCAGTGATCATTGGCATCAGCATGAATAGCTTTCCTGTAGTTCCAAAAATACCCACTTGTAGCGGTGTGTTCCTCATACTCACGCTGATGTTATGTACATGTATTTGTTCCA
>TRINITY_DN128077_c3_g1_i6 from sample A1 / Example unspliced isoform:TGAAGTTTGAACTTTGGATCCTCATATGCCCAATATCCATTGCCTTTTGCTATTTCTCCGTGCTATATCATCCTTTCACTGCATTATAAATTCATATTTTAGTAGAAAAAAACATGTCTTGCTGAGATTTTTGAATTTTCAAATGCTGAAATTTATACCACTGCTTGTTTTCTTTTAAAATATTCTCCCTTGCATTCAGT
AACTCCGCAGCTAAATATATAGGTTATCTAATGAATTGGAAAAGGCACGTGCTTCCTTGACTCGAGCAGAGAAAGATATTGAGGGCAAGACAAAGGAGATTGAAGAAATAGCAGCTGCAAGGAAAGTTGCTCAAGAGGGGCATACTGCTGCAGTGGACCAACTTATGCAGCGCCTTAGTGAGGTTGAAAGTGGTAAACTA
GAAGTAGTTGTCGAAGAAAACAAAAAGTTGTCTGAACAATTACAAGAAAGCAATACAGCAGTTAGAAAGTTGCAGGACCATTGTACAGAAGTTCAGAAGTGCTTGCTTGAATTTGAACAGGGGGGCAGTCGATCTATGTATCAGCAAACAAACAAAAATTATGCTCTTGATAGTAGTAATATTGCAGGTGGTCATGACAG
GGAGTTGCTTGTAAAAGCTATTTATGATCTTAATTTTCAGAATGAATATTTGAAATCACAGCTTCAAAACTTTTATGCCCAGACCACTGAATATGGCAGTCTAGAAGAGTACACTGAACAGTCGAAAGGAACTGATGCAGAAATTCGTCTAGATGCTCTTAGAGATTTGGAGAAACAGATATCAGTTTTGAATGAACAAC
TTGCAGAAAGCAGAATGTTACAAGCTACTGCAGAGAATCACATGAAACAATTTCAGCAGGCATGCACGGAGTCAGAGCAAAGGTTTCAAGATCTTTCTGCACAGCTTTCTGAAGTCCGGGAAAAAATGGAGAATGAAATAAAGGGGCGTGATGAGAGATACATGGAGCTTGATGCAAAGTTTGTGCGTTTGCAAAAACGA
GCAAAGCAGAAGATACAAGAACTTCAGAAGGAGAAAGAAGATGTTGAGGTTCAGCTTTCTATTGCAAGTGAGAAAGCTTCACAGGCCATGGCACAGCAATCTATGATACAAGAGGAACTGGAATGCACTCGACGTCAGGCGGGTGAAGCGCTGCGGTCCTTAGATGGGGAGAAGCAGCAATTGCGCATTGCTAATAGTAG
GCAGAAAGAGACTCTTGAGGAGCTGCGTCGAACGTTGGAAGCTAGGGAGCATGATATAGAAGAATTGAAGCAGTCTCTTTCTGAGAAAGATCAGATGTTGCAAGATACAGAAGTTTCATTAAAAGTCATGGATGAAAAGCGCCAAGCTTCCCTCTCTGATTATGCTACGAAACATCAAAAGCTTGTGGAGAGCTTTGAAT
CTCAGTTGGCTGATGCAAACTTGGAAAGGAGCAAAGCAGCTGAGGCAATATCAAAGCTACAGGAAGAGCTGGCTGACAGAGAATCAAAGTTTGCAGAGTTGGAGGCAGCTTCTACGGGTGAGGCAGTGAGGCTTGGAGTTGCTTTGGATTCAGCAAAAGGAGAGGTTATTCGTGCTAAGCAAGAGCATCAAAAGGAGAAG
GAAAGCTGGGAGGCTGCACTACAAACAATGAAAGCTAAGCTTGAAGAGTCAGAAAAGGCCTGCTTGCAATATGAGATTGTTGTAGCAAAGACAAGAAGCCAATTGGAGTCGGAGTTGGCAGGATTACAGCAGGCCCTTAATGGAACTAAAGAAGAACTTGAATCTAGTAGAGGAGAGCTTAGTCGTTTAGAAGCTGACTT
TAAAGCTTACAAGAATCGCGCTCATGCTCTTCTTCAAAAAAAGGAAGCCGAGCTGTCTGCTGTAAAGGATATGGATCTTGTAGCAGCTCAAGAGGCTGCCTTAAAGGAAGCCCAAAGAGATGCAGCTTTAGCCTACGCTGAAAGAGATCGTGCTCTGAAAGCTCTTCAAGATTCTGTCAAAAATCATGAAACTGAACTTG
CAACGAGGGCCGTAGCTCTGATAGATGCAGAACAGAGGATTAAAGACATGGCAATGAAACTTGAGTCCACAAAAGCTCATTTGCGATCAGAACAAGAAGCTTGGCAGAGTACTCTCTCAAATGTCCAAGAAACATGGCGCGTAAAATATGAGGCTCTAGAGGCTCAAACAAATAAAACGGCTATAACAGGTTTGGATGAG
GACCTAGAATCATTCAGGATGAACTATGAGAAACTTAAGGAGGAGCATGATTCCTTTCGGGAGATGGCTAACAACATCATTGAGGCGAAGGACAATGAAATTTCTCGCCTTTTAGATGATAATAACAACCTGCAAAGATCACTGCGTGCAAATCATCTGGTGGAGAAAGACCGTGGCAGTAATCAAGCTTCAGTACAACA
AGATTCATCTGTATCTGTTGTTGCAGTGGCAGAGCAACAAATTTTGCTCCTAGCCAGGCAACAAGCCCAAAGGGAGGAGGAGCTTGCTCAGCGTCAGCGACATATTGAGGCCCTTCAAGAAGAGATTGCTGAGCTTGAGCGTGAGAATCGTCTCCACCATCAACAGGAAGTGATGCTTAAGGGTGAATTGCGGAACATGG
ATAGGGTTCAGAAGCGTGGTGGTGTGGATATGACATATCTGAAGAATGTTATTTTGAAATTGCTTGAAACTGGAGAAGTTGAGGCTCTCCTCCCAGTCATTGGAACGTTACTGCAGTTCAGCCCTGAAGAGATCAAGAAATGTCACGAGACCTATAATGCTCTACCAAATGTACCTCTAAGTGGTGCTGCAGCTGTGGTT
GATGCTGCAGCCTCCGGACCACGCTCCTTTTTCTCAAGATTTACACTTTGAAGTGTAGGATAAATGGAgtatattgtattcttgtgcattggctactctgatctttgttgcataatgcatcacttccttggcaatgatctgtcttaagatagtttcttcatgggaaaattaatgaacatctgttttctgcacagATGAAC
ATCAATTGACATCATAGAGCATCTACAGACTGTATTAAGAAATGGCTGGCTTGTAGACATTACTTTGTAAATGTGTCAAAGTGTTGAAGCTGTGTTGTGATTCCTGTTACCATGTTTACTCTATCAACAGCAGTGGCCTGCATGAAACGGGGGCTTATTATCACGAGGTTATCTAAGCAATCAGTTATATGGCATTCAGT
TTCACACTCTAATTACAATAGCTTACGTCAATTGAAAAGTGATTTGGGGCAGGTTATGTCTGTGGCCCCATGTAATCCACGCCTGTGCAGAGGATGAGTTCATTGCTTCAAATTTTCTGGACTCCTGGACTGGCTTCAGCTACTGGTTCCTTACTACCAAGTCGGGATTTTCTGAAGTTTTTGAAAACATTTCTTCAAAG
ATTATTATCCTAGTTAACCATGGATGACTGGTTCATCTCCTGTATACTAACATTATTTGGACAGCAGTGTGTTCATCACTAGCATGTAAAGCTTATATCAGCTATGTCCCAGGGAGTTAAAATTGTGAGATAACGGTATGTTGGATCAGCTGGCATACTCGAAAAAACGATTATCCATTTCAACAGGCATTCGAACTTCT
CAATTTCTAAGAAATTCGATTCTTTTAATTCATACCATTTTCTGCACCTCTTAACCCAACAATGCATGTAAGAGGTCAATAAAAGTATGAATTTGAATTATTGCATTGACCCGTATTTAAACTTGGAAGGATACGACCAATTATGGATTCCCAGCATACCTCAAGTCCGTGTGTGTTCCCATTACAAGTACAAGGGTGGT
CATTTGTTTTATTCTAGTTTCTTTCCTGTACTTGAGGATTTGTTTTATGTAAAGATGTTGGATGTTGTTCATGGCAGATGCCTGCAGCCTGACAACGATGCATTGAATGTAAAGAAACTATGTGGAAAGTCACAGTGGGCGTATAATTTGTACAATTTGTTTCCCTCGATCATGTCTAGGGTTTCCATGGAATAGATGAC
TAATGGAGTACCTGTGTTTGTAGAAAGGACTTGTCAAGGTTCACTATTGGAGTTAACAGAATAAAATAATTTTTGAAGTTGTCAGCAGTGATCATTGGCATCAGCATGAATAGCTTTCCTGTAGTTCCAAAAATACCCACTTGTAGCGGTGTGTTCCTCATACTCACGCTGATGTTATGTACATGTATTTGTTCCA
Intron 3 GTAGGATAAA ... TTCTGCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 54.88 | 30 | 25.2 | 35 |
| A2 | 52.37 | 18.3 | 17.6 | 19.3 |
| A3 | 37.86 | 33.7 | 23.1 | 18 |
| A4 | 30.98 | 27.3 | 16.8 | 9.1 |
| A5 | 60.1 | 4.7 | 3.6 | 7 |
| A6 | 51.69 | 25.3 | 24.6 | 26.1 |
| A7 | 47.24 | 44.7 | 32.7 | 36 |
| A8 | 45.21 | 75.3 | 39.1 | 60 |
| A9 | 36.8 | 41.3 | 28.9 | 20.2 |
| A10 | 46.64 | 25.7 | 28.9 | 19.1 |
>TRINITY_DN128077_c3_g1_i2 from sample A1 / Example spliced isoformCTCATCTCTTTCACGCACTAACCTAGGAAAATCTCACACAAAAACCACGGGAAAAACAGTGTAAGAGAACATACGCTTATTTTAGTCCAACTCTGGTTCTGTGCCCCCTTCTGATTTGGATACATAATTCGGTCGACGTGTAGCTGAAGGCGCTGGAACTTAAAAACGTCCATCGGTCACACGGTCGAATCTCATACAAG
CTTCCTATACAAACCCCACACTACAAGACGAGGCTGCAGTGCAGAATTCACTTAGACCGCGGGACAAAGTTCACAATTTATGCATCCCGGACATTCACACGTGGTCATCCTTGACGCTGTACGCTACAAGAATCTCGATCTACAGAAATAATGTAAAGGAAGAGCTGCATTTACCTCGGATCTGCCCCGGCATTCTCAAA
TACCCCTCTAATTTGCGAGGATTCATTACCATCTCCATGAAATTTACAGAATTTTAGCAGAGATTTGCTGGAAATTGTTAAAAGTCGTTCAACAATGACGTCGAGAGAGGCAGCTTTAGAGGAAGAGAATGCAAAGCTAGTGGCCGAAATGGCTTCAATGAAGAAGAAAATAGTGGTGCATCTCAAGAAACAGCAAGCCG
AGCTCCAGGCTAAGCTTCAGGCTGCGGAATCCCGGGCTGCAGCGGCGGAAACCGCCCTTGCTGCCTCTTCCAATAATGCAAATTCAGTGGATAACGAACAAGTCAGCAAATTGAAGGCCGAATTGGAGGATGAAAAAGAACGGAACCGGAAACTGGAAGAATCAACAATTGCGGAGAATAAAAGACTGGAGGCTCAGATA
CAGCAGCTTAAGAAAGTTTTGGAGGAAGAATCAATCAAAAGGGATGCAAAAGAGAAGCTGCTGGAAAAGGAACTAAAGGATAGTCAGGACAGTGCACAGAAGCAGATAGGAGAGTTGATACTGATAAATGAAAAGTTGGAAGCTCAGCTTCTTGCAGCAGCTGGGCAGGTCTCTGAAGCATTTACAAGGATTTCTTCAAC
TCAAGATGACATGGAAAGAATTTCCAAGGAAAGTCATGAAACAAGTCACGCACATGCAAAATTGATAAAGGAACACGAGAGGTTATCTAATGAATTGGAAAAGGCACGTGCTTCCTTGACTCGAGCAGAGAAAGATATTGAGGGCAAGACAAAGGAGATTGAAGAAATAGCAGCTGCAAGGAAAGTTGCTCAAGAGGGGC
ATACTGCTGCAGTGGACCAACTTATGCAGCGCCTTAGTGAGGTTGAAAGTGGTAAACTAGAAGTAGTTGTCGAAGAAAACAAAAAGTTGTCTGAACAATTACAAGAAAGCAATACAGCAGTTAGAAAGTTGCAGGACCATTGTACAGAAGTTCAGAAGTGCTTGCTTGAATTTGAACAGGGGGGCAGTCGATCTATGTAT
CAGCAAACAAACAAAAATTATGCTCTTGATAGTAGTAATATTGCAGGTGGTCATGACAGGGAGTTGCTTGTAAAAGCTATTTATGATCTTAATTTTCAGAATGAATATTTGAAATCACAGCTTCAAAACTTTTATGCCCAGACCACTGAATATGGCAGTCTAGAAGAGTACACTGAACAGTCGAAAGGAACTGATGCAGA
AATTCGTCTAGATGCTCTTAGAGATTTGGAGAAACAGATATCAGTTTTGAATGAACAACTTGCAGAAAGCAGAATGTTACAAGCTACTGCAGAGAATCACATGAAACAATTTCAGCAGGCATGCACGGAGTCAGAGCAAAGGTTTCAAGATCTTTCTGCACAGCTTTCTGAAGTCCGGGAAAAAATGGAGAATGAAATAA
AGGGGCGTGATGAGAGATACATGGAGCTTGATGCAAAGTTTGTGCGTTTGCAAAAACGAGCAAAGCAGAAGATACAAGAACTTCAGAAGGAGAAAGAAGATGTTGAGGTTCAGCTTTCTATTGCAAGTGAGAAAGCTTCACAGGCCATGGCACAGCAATCTATGATACAAGAGGAACTGGAATGCACTCGACGTCAGGCG
GGTGAAGCGCTGCGGTCCTTAGATGGGGAGAAGCAGCAATTGCGCATTGCTAATAGTAGGCAGAAAGAGACTCTTGAGGAGCTGCGTCGAACGTTGGAAGCTAGGGAGCATGATATAGAAGAATTGAAGCAGTCTCTTTCTGAGAAAGATCAGATGTTGCAAGATACAGAAGTTTCATTAAAAGTCATGGATGAAAAGCG
CCAAGCTTCCCTCTCTGATTATGCTACGAAACATCAAAAGCTTGTGGAGAGCTTTGAATCTCAGTTGGCTGATGCAAACTTGGAAAGGAGCAAAGCAGCTGAGGCAATATCAAAGCTACAGGAAGAGCTGGCTGACAGAGAATCAAAGTTTGCAGAGTTGGAGGCAGCTTCTACGGGTGAGGCAGTGAGGCTTGGAGTTG
CTTTGGATTCAGCAAAAGGAGAGGTTATTCGTGCTAAGCAAGAGCATCAAAAGGAGAAGGAAAGCTGGGAGGCTGCACTACAAACAATGAAAGCTAAGCTTGAAGAGTCAGAAAAGGCCTGCTTGCAATATGAGATTGTTGTAGCAAAGACAAGAAGCCAATTGGAGTCGGAGTTGGCAGGATTACAGCAGGCCCTTAAT
GGAACTAAAGAAGAACTTGAATCTAGTAGAGGAGAGCTTAGTCGTTTAGAAGCTGACTTTAAAGCTTACAAGAATCGCGCTCATGCTCTTCTTCAAAAAAAGGAAGCCGAGCTGTCTGCTGTAAAGGATATGGATCTTGTAGCAGCTCAAGAGGCTGCCTTAAAGGAAGCCCAAAGAGATGCAGCTTTAGCCTACGCTGA
AAGAGATCGTGCTCTGAAAGCTCTTCAAGATTCTGTCAAAAATCATGAAACTGAACTTGCAACGAGGGCCGTAGCTCTGATAGATGCAGAACAGAGGATTAAAGACATGGCAATGAAACTTGAGTCCACAAAAGCTCATTTGCGATCAGAACAAGAAGCTTGGCAGAGTACTCTCTCAAATGTCCAAGAAACATGGCGCG
TAAAATATGAGGCTCTAGAGGCTCAAACAAATAAAACGGCTATAACAGGTTTGGATGAGGACCTAGAATCATTCAGGATGAACTATGAGAAACTTAAGGAGGAGCATGATTCCTTTCGGGAGATGGCTAACAACATCATTGAGGCGAAGGACAATGAAATTTCTCGCCTTTTAGATGATAATAACAACCTGCAAAGATCA
CTGCGTGCAAATCATCTGGTGGAGAAAGACCGTGGCAGTAATCAAGCTTCAGTACAACAAGATTCATCTGTATCTGTTGTTGCAGTGGCAGAGCAACAAATTTTGCTCCTAGCCAGGCAACAAGCCCAAAGGGAGGAGGAGCTTGCTCAGCGTCAGCGACATATTGAGGCCCTTCAAGAAGAGATTGCTGAGCTTGAGCG
TGAGAATCGTCTCCACCATCAACAGGAAGTGATGCTTAAGGGTGAATTGCGGAACATGGATAGGGTTCAGAAGCGTGGTGGTGTGGATATGACATATCTGAAGAATGTTATTTTGAAATTGCTTGAAACTGGAGAAGTTGAGGCTCTCCTCCCAGTCATTGGAACGTTACTGCAGTTCAGCCCTGAAGAGATCAAGAAAT
GTCACGAGACCTATAATGCTCTACCAAATGTACCTCTAAGTGGTGCTGCAGCTGTGGTTGATGCTGCAGCCTCCGGACCACGCTCCTTTTTCTCAAGATTTACACTTTGAAGTATGAACATCAATTGACATCATAGAGCATCTACAGACTGTATTAAGAAATGGCTGGCTTGTAGACATTACTTTGTAAATGTGTCAAAG
TGTTGAAGCTGTGTTGTGATTCCTGTTACCATGTTTACTCTATCAACAGCAGTGGCCTGCATGAAACGGGGGCTTATTATCACGAGGTTATCTAAGCAATCAGTTATATGGCATTCAGTTTCACACTCTAATTACAATAGCTTACGTCAATTGAAAAGTGATTTGGGGCAGGTTATGTCTGTGGCCCCATGTAATCCACG
CCTGTGCAGAGGATGAGTTCATTGCTTCAAATTTTCTGGACTCCTGGACTGGCTTCAGCTACTGGTTCCTTACTACCAAGTCGGGATTTTCTGAAGTTTTTGAAAACATTTCTTCAAAGATTATTATCCTAGTTAACCATGGATGACTGGTTCATCTCCTGTATACTAACATTATTTGGACAGCAGTGTGTTCATCACTA
GCATGTAAAGCTTATATCAGCTATGTCCCAGGGAGTTAAAATTGTGAGATAACGGTATGTTGGATCAGCTGGCATACTCGAAAAAACGATTATCCATTTCAACAGGCATTCGAACTTCTCAATTTCTAAGAAATTCGATTCTTTTAATTCATACCATTTTCTGCACCTCTTAACCCAACAATGCATGTAAGAGGTCAATA
AAAGTATGAATTTGAATTATTGCATTGACCCGTATTTAAACTTGGAAGGATACGACCAATTATGGATTCCCAGCATACCTCAAGTCCGTGTGTGTTCCCATTACAAGTACAAGGGTGGTCATTTGTTTTATTCTAGTTTCTTTCCTGTACTTGAGGATTTGTTTTATGTAAAGATGTTGGATGTTGTTCATGGCAGATGC
CTGCAGCCTGACAACGATGCATTGAATGTAAAGAAACTATGTGGAAAGTCACAGTGGGCGTATAATTTGTACAATTTGTTTCCCTCGATCATGTCTAGGGTTTCCATGGAATAGATGACTAATGGAGTACCTGTGTTTGTAGAAAGGACTTGTCAAGGTTCACTATTGGAGTTAACAGAATAAAATAATTTTTGAAGTTG
TCAGCAGTGATCATTGGCATCAGCATGAATAGCTTTCCTGTAGTTCCAAAAATACCCACTTGTAGCGGTGTGTTCCTCATACTCACGCTGATGTTATGTACATGTATTTGTTCCA
>TRINITY_DN128077_c3_g1_i7 from sample A1 / Example unspliced isoform:CTCATCTCTTTCACGCACTAACCTAGGAAAATCTCACACAAAAACCACGGGAAAAACAGTGTAAGAGAACATACGCTTATTTTAGTCCAACTCTGGTTCTGTGCCCCCTTCTGATTTGGATACATAATTCGGTCGACGTGTAGCTGAAGGCGCTGGAACTTAAAAACGTCCATCGGTCACACGGTCGAATCTCATACAAG
CTTCCTATACAAACCCCACACTACAAGACGAGGCTGCAGTGCAGAATTCACTTAGACCGCGGGACAAAGTTCACAATTTATGCATCCCGGACATTCACACGTGGTCATCCTTGACGCTGTACGCTACAAGAATCTCGATCTACAGAAATAATGTAAAGGAAGAGCTGCATTTACCTCGGATCTGCCCCGGCATTCTCAAA
TACCCCTCTAATTTGCGAGGATTCATTACCATCTCCATGAAATTTACAGAATTTTAGCAGAGATTTGCTGGAAATTGTTAAAAGTCGTTCAACAATGACGTCGAGAGAGGCAGCTTTAGAGGAAGAGAATGCAAAGCTAGTGGCCGAAATGGCTTCAATGAAGAAGAAAATAGTGGTGCATCTCAAGAAACAGCAAGCCG
AGCTCCAGGCTAAGCTTCAGGCTGCGGAATCCCGGGCTGCAGCGGCGGAAACCGCCCTTGCTGCCTCTTCCAATAATGCAAATTCAGTGGATAACGAACAAGTCAGCAAATTGAAGGCCGAATTGGAGGATGAAAAAGAACGGAACCGGAAACTGGAAGAATCAACAATTGCGGAGAATAAAAGACTGGAGGCTCAGATA
CAGCAGCTTAAGAAAGTTTTGGAGGAAGAATCAATCAAAAGGGATGCAAAAGAGAAGCTGCTGGAAAAGGAACTAAAGGATAGTCAGGACAGTGCACAGAAGCAGATAGGAGAGTTGATACTGATAAATGAAAAGTTGGAAGCTCAGCTTCTTGCAGCAGCTGGGCAGGTCTCTGAAGCATTTACAAGGATTTCTTCAAC
TCAAGATGACATGGAAAGAATTTCCAAGGAAAGTCATGAAACAAGTCACGCACATGCAAAATTGATAAAGGAACACGAGAGGTTATCTAATGAATTGGAAAAGGCACGTGCTTCCTTGACTCGAGCAGAGAAAGATATTGAGGGCAAGACAAAGGAGATTGAAGAAATAGCAGCTGCAAGGAAAGTTGCTCAAGAGGGGC
ATACTGCTGCAGTGGACCAACTTATGCAGCGCCTTAGTGAGGTTGAAAGTGGTAAACTAGAAGTAGTTGTCGAAGAAAACAAAAAGTTGTCTGAACAATTACAAGAAAGCAATACAGCAGTTAGAAAGTTGCAGGACCATTGTACAGAAGTTCAGAAGTGCTTGCTTGAATTTGAACAGGGGGGCAGTCGATCTATGTAT
CAGCAAACAAACAAAAATTATGCTCTTGATAGTAGTAATATTGCAGGTGGTCATGACAGGGAGTTGCTTGTAAAAGCTATTTATGATCTTAATTTTCAGAATGAATATTTGAAATCACAGCTTCAAAACTTTTATGCCCAGACCACTGAATATGGCAGTCTAGAAGAGTACACTGAACAGTCGAAAGGAACTGATGCAGA
AATTCGTCTAGATGCTCTTAGAGATTTGGAGAAACAGATATCAGTTTTGAATGAACAACTTGCAGAAAGCAGAATGTTACAAGCTACTGCAGAGAATCACATGAAACAATTTCAGCAGGCATGCACGGAGTCAGAGCAAAGGTTTCAAGATCTTTCTGCACAGCTTTCTGAAGTCCGGGAAAAAATGGAGAATGAAATAA
AGGGGCGTGATGAGAGATACATGGAGCTTGATGCAAAGTTTGTGCGTTTGCAAAAACGAGCAAAGCAGAAGATACAAGAACTTCAGAAGGAGAAAGAAGATGTTGAGGTTCAGCTTTCTATTGCAAGTGAGAAAGCTTCACAGGCCATGGCACAGCAATCTATGATACAAGAGGAACTGGAATGCACTCGACGTCAGGCG
GGTGAAGCGCTGCGGTCCTTAGATGGGGAGAAGCAGCAATTGCGCATTGCTAATAGTAGGCAGAAAGAGACTCTTGAGGAGCTGCGTCGAACGTTGGAAGCTAGGGAGCATGATATAGAAGAATTGAAGCAGTCTCTTTCTGAGAAAGATCAGATGTTGCAAGATACAGAAGTTTCATTAAAAGTCATGGATGAAAAGCG
CCAAGCTTCCCTCTCTGATTATGCTACGAAACATCAAAAGCTTGTGGAGAGCTTTGAATCTCAGTTGGCTGATGCAAACTTGGAAAGGAGCAAAGCAGCTGAGGCAATATCAAAGCTACAGGAAGAGCTGGCTGACAGAGAATCAAAGTTTGCAGAGTTGGAGGCAGCTTCTACGGGTGAGGCAGTGAGGCTTGGAGTTG
CTTTGGATTCAGCAAAAGGAGAGGTTATTCGTGCTAAGCAAGAGCATCAAAAGGAGAAGGAAAGCTGGGAGGCTGCACTACAAACAATGAAAGCTAAGCTTGAAGAGTCAGAAAAGGCCTGCTTGCAATATGAGATTGTTGTAGCAAAGACAAGAAGCCAATTGGAGTCGGAGTTGGCAGGATTACAGCAGGCCCTTAAT
GGAACTAAAGAAGAACTTGAATCTAGTAGAGGAGAGCTTAGTCGTTTAGAAGCTGACTTTAAAGCTTACAAGAATCGCGCTCATGCTCTTCTTCAAAAAAAGGAAGCCGAGCTGTCTGCTGTAAAGGATATGGATCTTGTAGCAGCTCAAGAGGCTGCCTTAAAGGAAGCCCAAAGAGATGCAGCTTTAGCCTACGCTGA
AAGAGATCGTGCTCTGAAAGCTCTTCAAGATTCTGTCAAAAATCATGAAACTGAACTTGCAACGAGGGCCGTAGCTCTGATAGATGCAGAACAGAGGATTAAAGACATGGCAATGAAACTTGAGTCCACAAAAGCTCATTTGCGATCAGAACAAGAAGCTTGGCAGAGTACTCTCTCAAATGTCCAAGAAACATGGCGCG
TAAAATATGAGGCTCTAGAGGCTCAAACAAATAAAACGGCTATAACAGGTTTGGATGAGGACCTAGAATCATTCAGGATGAACTATGAGAAACTTAAGGAGGAGCATGATTCCTTTCGGGAGATGGCTAACAACATCATTGAGGCGAAGGACAATGAAATTTCTCGCCTTTTAGATGATAATAACAACCTGCAAAGATCA
CTGCGTGCAAATCATCTGGTGGAGAAAGACCGTGGCAGTAATCAAGCTTCAGTACAACAAGATTCATCTGTATCTGTTGTTGCAGTGGCAGAGCAACAAATTTTGCTCCTAGCCAGGCAACAAGCCCAAAGGGAGGAGGAGCTTGCTCAGCGTCAGCGACATATTGAGGCCCTTCAAGAAGAGATTGCTGAGCTTGAGCG
TGAGAATCGTCTCCACCATCAACAGGAAGTGATGCTTAAGGGTGAATTGCGGAACATGGATAGGGTTCAGAAGCGTGGTGGTGTGGATATGACATATCTGAAGAATGTTATTTTGAAATTGCTTGAAACTGGAGAAGTTGAGGCTCTCCTCCCAGTCATTGGAACGTTACTGCAGTTCAGCCCTGAAGAGATCAAGAAAT
GTCACGAGACCTATAATGCTCTACCAAATGTACCTCTAAGTGGTGCTGCAGCTGTGGTTGATGCTGCAGCCTCCGGACCACGCTCCTTTTTCTCAAGATTTACACTTTGAAGTgtaggataaatggagtatattgtattcttgtgcattggctactctgatctttgttgcataatgcatcacttccttggcaatgatctg
tcttaagatagtttcttcatgggaaaattaatgaacatctgttttctgcacagATGAACATCAATTGACATCATAGAGCATCTACAGACTGTATTAAGAAATGGCTGGCTTGTAGACATTACTTTGTAAATGTGTCAAAGTGTTGAAGCTGTGTTGTGATTCCTGTTACCATGTTTACTCTATCAACAGCAGTGGCCTGC
ATGAAACGGGGGCTTATTATCACGAGGTTATCTAAGCAATCAGTTATATGGCATTCAGTTTCACACTCTAATTACAATAGCTTACGTCAATTGAAAAGTGATTTGGGGCAGGTTATGTCTGTGGCCCCATGTAATCCACGCCTGTGCAGAGGATGAGTTCATTGCTTCAAATTTTCTGGACTCCTGGACTGGCTTCAGCT
ACTGGTTCCTTACTACCAAGTCGGGATTTTCTGAAGTTTTTGAAAACATTTCTTCAAAGATTATTATCCTAGTTAACCATGGATGACTGGTTCATCTCCTGTATACTAACATTATTTGGACAGCAGTGTGTTCATCACTAGCATGTAAAGCTTATATCAGCTATGTCCCAGGGAGTTAAAATTGTGAGATAACGGTATGT
TGGATCAGCTGGCATACTCGAAAAAACGATTATCCATTTCAACAGGCATTCGAACTTCTCAATTTCTAAGAAATTCGATTCTTTTAATTCATACCATTTTCTGCACCTCTTAACCCAACAATGCATGTAAGAGGTCAATAAAAGTATGAATTTGAATTATTGCATTGACCCGTATTTAAACTTGGAAGGATACGACCAAT
TATGGATTCCCAGCATACCTCAAGTCCGTGTGTGTTCCCATTACAAGTACAAGGGTGGTCATTTGTTTTATTCTAGTTTCTTTCCTGTACTTGAGGATTTGTTTTATGTAAAGATGTTGGATGTTGTTCATGGCAGATGCCTGCAGCCTGACAACGATGCATTGAATGTAAAGAAACTATGTGGAAAGTCACAGTGGGCG
TATAATTTGTACAATTTGTTTCCCTCGATCATGTCTAGGGTTTCCATGGAATAGATGACTAATGGAGTACCTGTGTTTGTAGAAAGGACTTGTCAAGGTTCACTATTGGAGTTAACAGAATAAAATAATTTTTGAAGTTGTCAGCAGTGATCATTGGCATCAGCATGAATAGCTTTCCTGTAGTTCCAAAAATACCCACT
TGTAGCGGTGTGTTCCTCATACTCACGCTGATGTTATGTACATGTATTTGTTCCA
Intron 4 GCAGAAAGAG ... GAAAGATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 74 | 26 | 75 | 73 |
| A2 | 77.32 | 11 | 36 | 39 |
| A3 | 67.27 | 18 | 35 | 39 |
| A4 | 59.18 | 20 | 25 | 33 |
| A5 | 64.44 | 8 | 12 | 17 |
| A6 | 71.43 | 2 | 2 | 8 |
| A7 | 82.52 | 9 | 44 | 41 |
| A8 | 60.71 | 11 | 16 | 18 |
| A9 | 75 | 10 | 24 | 36 |
| A10 | 80.33 | 6 | 21 | 28 |
>TRINITY_DN107147_c0_g1_i14 from sample A4 / Example spliced isoformGAAAATCTCACACAAAAACCACGGGAAAAACAGTGTAAGAGAACATACGCTTATTTTAGTCCAACTCTGGTTCTGTGCCCCCTTCTGATTTGGATACATAATTCGGTCGACGTGTAGCTGAAGGCGCTGGAACTTAAAAACGTCCATCGGTCACACGGTCGAATCTCATACAAGCTTCCTATACAAACCCCACACTACAA
GACGAGGCTGCAGTGCAGAATTCACTTAGACCGCGGGACAAAGTTCACAATTTATGCATCCCGGACATTCACACGTGGTCATCCTTGACGCTGTACGCTACAAGAATCTCGATCTACAGAAATAATGTAAAGGAAGAGCTGCATTTACCTCGGATCTGCCCCGGCATTCTCAAATACCCCTCTAATTTGCGAGGATTCAT
TACCATCTCCATGAAATTTACAGAATTTTAGCAGAGATTTGCTGGAAATTGTTAAAAGTCGTTCAACAATGACGTCGAGAGAGGCAGCTTTAGAGGAAGAGAATGCAAAGCTAGTGGCCGAAATGGCTTCAATGAAGAAGAAAATAGTGGTGCATCTCAAGAAACAGCAAGCCGAGCTCCAGGCTAAGCTTCAGGCTGCG
GAATCCCGGGCTGCAGCGGCGGAAACCGCCCTTGCTGCCTCTTCCAATAATGCAAATTCAGTGGATAACGAACAAGTCAGCAAATTGAAGGCCGAATTGGAGGATGAAAAAGAACGGAACCGGAAACTGGAAGAATCAACAATTGCGGAGAATAAAAGACTGGAGGCTCAGATACAGCAGCTTAAGAAAGTTTTGGAGGA
AGAATCAATCAAAAGGGATGCAAAAGAGAAGCTGCTGGAAAAGGAACTAAAGGATAGTCAGGACAGTGCACAGAAGCAGATAGGAGAGTTGATACTGATAAATGAAAAGTTGGAAGCTCAGCTTCTTGCAGCAGCTGGGCAGGTCTCTGAAGCATTTACAAGGATTTCTTCAACTCAAGATGACATGGAAAGAATTTCCA
AGGAAAGTCATGAAACAAGTCACGCACATGCAAAATTGATAAAGGAACACGAGAGGTTATCTAATGAATTGGAAAAGGCACGTGCTTCCTTGACTCGAGCAGAGAAAGATATTGAGGGCAAGACAAAGGAGATTGAAGAAATAGCAGCTGCAAGGAAAGTTGCTCAAGAGGGGCATACTGCTGCAGTGGACCAACTTATG
CAGCGCCTTAGTGAGGTTGAAAGTGGTAAACTAGAAGTAGTTGTCGAAGAAAACAAAAAGTTGTCTGAACAATTACAAGAAAGCAATACAGCAGTTAGAAAGTTGCAGGACCATTGTACAGAAGTTCAGAAGTGCTTGCTTGAATTTGAACAGGGGGGCAGTCGATCTATGTATCAGCAAACAAACAAAAATTATGCTCT
TGATAGTAGTAATATTGCAGGTGGTCATGACAGGGAGTTGCTTGTAAAAGCTATTTATGATCTTAATTTTCAGAATGAATATTTGAAATCACAGCTTCAAAACTTTTATGCCCAGACCACTGAATATGGCAGTCTAGAAGAGTACACTGAACAGTCGAAAGGAACTGATGCAGAAATTCGTCTAGATGCTCTTAGAGATT
TGGAGAAACAGATATCAGTTTTGAATGAACAACTTGCAGAAAGCAGAATGTTACAAGCTACTGCAGAGAATCACATGAAACAATTTCAGCAGGCATGCACGGAGTCAGAGCAAAGGTTTCAAGATCTTTCTGCACAGCTTTCTGAAGTCCGGGAAAAAATGGAGAATGAAATAAAGGGGCGTGATGAGAGATACATGGAG
CTTGATGCAAAGTTTGTGCGTTTGCAAAAACGAGCAAAGCAGAAGATACAAGAACTTCAGAAGGAGAAAGAAGATGTTGAGGTTCAGCTTTCTATTGCAAGTGAGAAAGCTTCACAGGCCATGGCACAGCAATCTATGATACAAGAGGAACTGGAATGCACTCGACGTCAGGCGGGTGAAGCGCTGCGGTCCTTAGATGG
GGAGAAGCAGCAATTGCGCATTGCTAATAGTAGATGTTGCAAGATACAGAAGTTTCATTAAAAGTCATGGATGAAAAGCGCCAAGCTTCCCTCTCTGATTATGCTACGAAACATCAAAAGCTTGTGGAGAGCTTTGAATCTCAGTTGGCTGATGCAAACTTGGAAAGGAGCAAAGCAGCTGAGGCAATATCAAAGCTACA
GGAAGAGACTGCTAAAATATTGCACTATGCCGGTGGTGTCTCTCGTCATGCAGTTCGCAGCTCTAAAACTGAGTGTGCACATTGAAGGTAGCCGCAGCCTGTTGGTGAACCAAAGACCTGACCACCATATGGCATTTCCGTCTCATTATGGAAGAAAGCCGAG
>TRINITY_DN107147_c0_g1_i10 from sample A4 / Example unspliced isoform:AGCATAAATCATGTTAAGATAATTATTCCAACTAAATGTCTGTAGAAATTTCTAAATGTAAGACCCTGCAGCCCTTGTCCAATAGTTAAGTATCAGTCGTTATCAGAGCCTTTTGATTGGAACTTTGGAGTGATAGATATTTTCTCGGATTAGTCAACTGTTTAATCACTATATTCACTTATTTTAATGCAGGTGGAGAA
AGACCGTGGCAGTAATCAAGCTTCAGTACAACAAGATTCATCTGTATCTGTTGTTGCAGTGGCAGAGCAACAAATTTTGAAAATCTCACACAAAAACCACGGGAAAAACAGTGTAAGAGAACATACGCTTATTTTAGTCCAACTCTGGTTCTGTGCCCCCTTCTGATTTGGATACATAATTCGGTCGACGTGTAGCTGAA
GGCGCTGGAACTTAAAAACGTCCATCGGTCACACGGTCGAATCTCATACAAGCTTCCTATACAAACCCCACACTACAAGACGAGGCTGCAGTGCAGAATTCACTTAGACCGCGGGACAAAGTTCACAATTTATGCATCCCGGACATTCACACGTGGTCATCCTTGACGCTGTACGCTACAAGAATCTCGATCTACAGAAA
TAATGTAAAGGAAGAGCTGCATTTACCTCGGATCTGCCCCGGCATTCTCAAATACCCCTCTAATTTGCGAGGATTCATTACCATCTCCATGAAATTTACAGAATTTTAGCAGAGATTTGCTGGAAATTGTTAAAAGTCGTTCAACAATGACGTCGAGAGAGGCAGCTTTAGAGGAAGAGAATGCAAAGCTAGTGGCCGAA
ATGGCTTCAATGAAGAAGAAAATAGTGGTGCATCTCAAGAAACAGCAAGCCGAGCTCCAGGCTAAGCTTCAGGCTGCGGAATCCCGGGCTGCAGCGGCGGAAACCGCCCTTGCTGCCTCTTCCAATAATGCAAATTCAGTGGATAACGAACAAGTCAGCAAATTGAAGGCCGAATTGGAGGATGAAAAAGAACGGAACCG
GAAACTGGAAGAATCAACAATTGCGGAGAATAAAAGACTGGAGGCTCAGATACAGCAGCTTAAGAAAGTTTTGGAGGAAGAATCAATCAAAAGGGATGCAAAAGAGAAGCTGCTGGAAAAGGAACTAAAGGATAGTCAGGACAGTGCACAGAAGCAGATAGGAGAGTTGATACTGATAAATGAAAAGTTGGAAGCTCAGC
TTCTTGCAGCAGCTGGGCAGGTCTCTGAAGCATTTACAAGGATTTCTTCAACTCAAGATGACATGGAAAGAATTTCCAAGGAAAGTCATGAAACAAGTCACGCACATGCAAAATTGATAAAGGAACACGAGAGGTTATCTAATGAATTGGAAAAGGCACGTGCTTCCTTGACTCGAGCAGAGAAAGATATTGAGGGCAAG
ACAAAGGAGATTGAAGAAATAGCAGCTGCAAGGAAAGTTGCTCAAGAGGGGCATACTGCTGCAGTGGACCAACTTATGCAGCGCCTTAGTGAGGTTGAAAGTGGTAAACTAGAAGTAGTTGTCGAAGAAAACAAAAAGTTGTCTGAACAATTACAAGAAAGCAATACAGCAGTTAGAAAGTTGCAGGACCATTGTACAGA
AGTTCAGAAGTGCTTGCTTGAATTTGAACAGGGGGGCAGTCGATCTATGTATCAGCAAACAAACAAAAATTATGCTCTTGATAGTAGTAATATTGCAGGTGGTCATGACAGGGAGTTGCTTGTAAAAGCTATTTATGATCTTAATTTTCAGAATGAATATTTGAAATCACAGCTTCAAAACTTTTATGCCCAGACCACTG
AATATGGCAGTCTAGAAGAGTACACTGAACAGTCGAAAGGAACTGATGCAGAAATTCGTCTAGATGCTCTTAGAGATTTGGAGAAACAGATATCAGTTTTGAATGAACAACTTGCAGAAAGCAGAATGTTACAAGCTACTGCAGAGAATCACATGAAACAATTTCAGCAGGCATGCACGGAGTCAGAGCAAAGGTTTCAA
GATCTTTCTGCACAGCTTTCTGAAGTCCGGGAAAAAATGGAGAATGAAATAAAGGGGCGTGATGAGAGATACATGGAGCTTGATGCAAAGTTTGTGCGTTTGCAAAAACGAGCAAAGCAGAAGATACAAGAACTTCAGAAGGAGAAAGAAGATGTTGAGGTTCAGCTTTCTATTGCAAGTGAGAAAGCTTCACAGGCCAT
GGCACAGCAATCTATGATACAAGAGGAACTGGAATGCACTCGACGTCAGGCGGGTGAAGCGCTGCGGTCCTTAGATGGGGAGAAGCAGCAATTGCGCATTGCTAATAGTAGgcagaaagagactcttgaggagctgcgtcgaacgttggaagctagggagcatgatatagaagaattgaagcagtctctttctgagaaag
atcagATGTTGCAAGATACAGAAGTTTCATTAAAAGTCATGGATGAAAAGCGCCAAGCTTCCCTCTCTGATTATGCTACGAAACATCAAAAGCTTGTGGAGAGCTTTGAATCTCAGTTGGCTGATGCAAACTTGGAAAGGAGCAAAGCAGCTGAGGCAATATCAAAGCTACAGGAAGAGCTGGCTGACAGAGAATCAAAG
TTTGCAGAGTTGGAGGCAGCTTCTACGGGTGAGGCAGTGAGGCTTGGAGTTGCTTTGGATTCAGCAAAAGGAGAGGTTATTCGTGCTAAGCAAGAGCATCAAAAGGAGAAGGAAAGCTGGGAGGCTGCACTACAAACAATGAAAGCTAAGCTTGAAGAGTCAGAAAAGGCCTGCTTGCAATATGAGATTGTTGTAGCAAA
GACAAGAAGCCAATTGGAGTCGGAGTTGGCAGGATTACAGCAGGCCCTTAATGGAACTAAAGAAGAACTTGAATCTAGTAGAGGAGAGGAAGCCCAAAGAGATGCAGCTTTAGCCTACGCTGAAAGAGATCGTGCTCTGAAAGCTCTTCAAGATTCTGTCAAAAATCATGAAACTGAACTTGCAACGAGGGCCGTAGCTC
TGATAGATGCAGAACAGAGGATTAAAGACATGGCAATGAAACTTGAGTCCACAAAAGCTCATTTGCGATCAGAACAAGAAGCTTGGCAGAGTACTCTCTCAAATGTCCAAGAAACATGGCGCGTAAAATATGAGGCTCTAGAGGCTCAAACAAATAAAACGGCTATAACAGGTTTGGATGAGGACCTAGAATCATTCAGG
ATGAACTATGAGAAACTTAAGGAGGAGCATGATTCCTTTCGGGAGATGGCTAACAACATCATTGAGGCGAAGGACAATGAAATTTCTCGCCTTTTAGATGATAATAACAACCTGCAAAGATCACTGCGTGCAAATCATCTGGTGGAGAAAGACCGTGGCAGTAATCAAGCTTCAGTACAACAAGATTCATCTGTATCTGT
TGTTGCAGTGGCAGAGCAACAAATTTTGCTCCTAGCCAGGCAACAAGCCCAAAGGGAGGAGGAGCTTGCTCAGCGTCAGCGACATATTGAGGCCCTTCAAGAAGAGATTGCTGAGCTTGAGCGTGAGAATCGTCTCCACCATCAACAGGAAGTGATGCTTAAGGGTGAATTGCGGAACATGGATAGGGTTCAGAAGCGTG
GTGGTGTGGATATGACATATCTGAAGAATGTTATTTTGAAATTGCTTGAAACTGGAGAAGTTGAGGCTCTCCTCCCAGTCATTGGAACGTTACTGCAGTTCAGCCCTGAAGAGATCAAGAAATGTCACGAGACCTATAATGCTCTACCAAATGTACCTCTAAGTGGTGCTGCAGCTGTGGTTGATGCTGCAGCCTCCGGA
CCACGCTCCTTTTTCTCAAGATTTACACTTTGAAGTGTAGGATAAATGGAGTATATTGTATTCTTGTGCATTGGCTACTCTGATCTTTGTTGCATAATGCATCACTTCCTTGGCAATGATCTGTCTTAAGATAGTTTCTTCATGGGAAAATTAATGAACATCTGTTTTCTGCACAGATGAACATCAATTGACATCATAGA
GCATCTACAGACTGTATTAAGAAATGGCTGGCTTGTAGACATTACTTTGTAAATGTGTCAAAGTGTTGAAGCTGTGTTGTGATTCCTGTTACCATGTTTACTCTATCAACAGCAGTGGCCTGCATGAAACGGGGGCTTATTATCACGAGGTTATCTAAGCAATCAGTTATATGGCATTCAGTTTCACACTCTAATTACAA
TAGCTTACGTCAATTGAAAAGTGATTTGGGGCAGGTTATGTCTGTGGCCCCATGTAATCCACGCCTGTGCAGAGGATGAGTTCATTGCTTCAAATTTTCTGGACTCCTGGACTGGCTTCAGCTACTGGTTCCTTACTACCAAGTCGGGATTTTCTGAAGTTTTTGAAAACATTTCTTCAAAGATTATTATCCTAGTTAAC
CATGGATGACTGGTTCATCTCCTGTATACTAACATTATTTGGACAGCAGTGTGTTCATCACTAGCATGTAAAGCTTATATCAGCTATGTCCCAGGGAGTTAAAATTGTGAGATAACGGTATGTTGGATCAGCTGGCATACTCGAAAAAACGATTATCCATTTCAACAGGCATTCGAACTTCTCAATTTCTAAGAAATTCG
ATTCTTTTAATTCATACCATTTTCTGCACCTCTTAACCCAACAATGCATGTAAGAGGTCAATAAAAGTATGAATTTGAATTATTGCATTGACCCGTATTTAAACTTGGAAGGATACGACCAATTATGGATTCCCAGCATACCTCAAGTCCGTGTGTGTTCCCATTACAAGTACAAGGGTGGTCATTTGTTTTATTCTAGT
TTCTTTCCTGTACTTGAGGATTTGTTTTATGTAAAGATGTTGGATGTTGTTCATGGCAGATGCCTGCAGCCTGACAACGATGCATTGAATGTAAAGAAACTATGTGGAAAGTCACAGTGGGCGTATAATTTGTACAATTTGTTTCCCTCGATCATGTCTAGGGG