sp|Q8W4H1|GAT26_ARATH ----> GATA transcription factor 26
Intron 1 GCAAGTTCAC ... CTCTGCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 80.39 | 5 | 24 | 17 |
| A2 | 69.23 | 6 | 12 | 15 |
| A3 | 71.43 | 5 | 9 | 16 |
| A4 | 65.22 | 4 | 4 | 11 |
| A5 | 100 | 0 | 2 | 2 |
| A6 | 100 | 0 | 0 | 2 |
| A7 | 60 | 5 | 7 | 8 |
| A8 | 66.67 | 3 | 5 | 7 |
| A9 | 71.43 | 4 | 10 | 10 |
| A10 | 63.64 | 4 | 7 | 7 |
>TRINITY_DN41317_c0_g1_i3 from sample A7 / Example spliced isoformTCGGGCATTGAGAGCTCCGGTAAGCTCCATTTTCAGAGCTTGGAAGCCATTTTTTCGTCCGCAAATCTACTGATTTCAATCTACGCTCAATTTTCATACATTCTTCAGCTCGCAAGCTTTCAATCTGTGGTAGATTTGTGGATTTTGGTAAAGTGTGTGAATTTCTGTAATTTTTCAAAGTCATCACTGTCGGCCGTGGA
CTTTTACCTGTGGGAGCTGTTATTATTAGCGGTGCTATTTTGCATGTTGTGGGGGCACAGTTGCAAAGTTAGCAGAGGAACATGGGCAAGCAGGGTCCTTGCTACCATTGTGGGATTACCTACACTCCTCTGTGGCGGAATGGACCACCGGAGAAGCCAGTGCTATGCAATGCATGTGGATCCAGATGGAGAACAAAAGG
TACACTAGCAAATTACACACCATTGCATGCTCGAGCCTTTGAAGCCACAGATTCTTCAGATTATAAATGTGGGCATGGTAAAAAAGGATTACAAAACCCCAAACAACAAAGATCCAACAAAAGGAAAGAACCAGGTCAAGATGTTGAGTTTGGAGTTCTGGAATCAGACCCACAGTATGCAATGGGTGTCGAGGAGGATG
CTAGTAACAGGTCAAGCTCAGGGTCAGGGATATCATACTCTGAAGGGTGCATTCAATACGGTGGCACAGTTGGAATGGATAGTACAGGTTCTTTTCATACCCCTGCATGGGATTCACCCATTCCTTCAAAAAAGCGTACTTGCATGTATCGCAAGAGACCATCTTCAGTTGGAAAACTAATGAAAGGCTTGCGGTATATT
TTGCATGAACAAGATTCATCTTACCTATCAGGGTCCTCAGAGGATCTGCTCTTTGCCTGCAAAGATCCGATGGTTTCCACTGAGATAGGACTTGGCAGTGTATTTATTAGGCAACCACAGTCAGGAACATGTGAAGAGGAGTCAGAGCTTCAAAAAGAGGATAAATATTTGACCGAGAGAGAGAAGGAAAAGGTGAAACA
ATTGCAGGAATATTCAGATAAACACTATGGGCCTAACAAAGTACTTGCGGAGAATTTCCCTTATAACAAGCATGGTGTTCTGCAAAGTTGTCATTCGCCCCTGATTTTTGTGGACCTGAAAGATATAGTAAACTTTGATTCATTTATGGGGATCATGACGGTACAAGAACAAACACAGTTAATGGATTATGTCTCATCTG
TTGATATTGCCAGAGTTCCTGAAAGCCTACACTGCATGTTTAAGAGTGGACAATTTGAAGAGGCGTTAACCAACTTTCAGCAGCTACTTTCTGAAGGCATGTTTGACATTTACATGTCGGGATTAGACCCTCAACTAAAGCAGATTTTACAAAAACTGATAATCACAGATCTGACAAACACTAAATGGATAGAGAGATAT
CATCAAACTGAAAATCAGAGTAAGCGTAGAAGGGTGCTTGATTCTGCAAAAGTTGTACAAAATAAAATATCAACAAAGTCAAAGGGATCATGTTTATCTTCCAAGTCTGGCACATATTTAGCAGGCAAGAAATCTTTGGACTGGCAACCCTATCAAATTGTTACAGGATCAGATGATTGTATGCAAAGCCCTGGGAACTT
GCAAAAGAGTAGAAATGAAAATTCTTACCATGCAAATGAAGATATAAGATGTACATCCAAGGGTGACTTGAAATTTGATATTGAGCCAAAGTATGAGCCTTGCTTTAGTCCCAGAAGCTTATTTGCATCACCTTTGGAAAGGAGTTCTCTACTAGATTATAAAGGAACTCCTGGAAGAGAATGTTTCGAATGGGATTTGC
TTTTAGATGTTCCTTCAAACATCTCCTTTCAACATGCTGAGATTTTGCATTCCCCAGTGTGGAAATGCAAAGGCTTTAAGGATTCCATGACTGATGCAAACAACCTTGAGAATCCAAACAATGAAGAAGAAATGGCTAGTAATCTGTGGGGTTCAGAGGATAACTTAGAATGGAGTTCCCTATTTTGGAACCCTCCAAAT
GTCCCATCCGGACAAACATTGCCCAATGGAGCTACACTATATTCTGGGAAAAGGCTTCCTTGAATTGTATGTTGCTTGTGTATCTTTTGTGTATTTGACACTTCTATAGTTTTTAATCCCCTACCCGAAGGTCACTTTAAGAGGTGAATATGTTATCATGAAGATTTGATCAAGAGTGTATGATAAATGGTCTAGGTCCT
TGAGCAAATGATAATGTTGAGTAGTTTGGGCTTTGTAAAGTGTGAGAGTGCTATTATATATATAGACAACAAATAACAAATAAAAGTGAAAGTGCCTTGCACTTGTCAATGCGTA
>TRINITY_DN41317_c0_g1_i2 from sample A7 / Example unspliced isoform:TCGGGCATTGAGAGCTCCGGTAAGCTCCATTTTCAGAGCTTGGAAGCCATTTTTTCGTCCGCAAATCTACTGATTTCAATCTACGCTCAATTTTCATACATTCTTCAGCTCGCAAGCTTTCAATCTGTGGTAGATTTGTGGATTTTGGTAAAGTGTGTGAATTTCTGTAATTTTTCAAAGTCATCACTGTCGGCCGTGGA
CTTTTACCTGTGGGAGCTGTTATTATTAGCGGTGCTATTTTGCATGTTGTGGGGGCACAGTTGCAAAGTTAGCAGAGGAACATGGGCAAGCAGGGTCCTTGCTACCATTGTGGGATTACCTACACTCCTCTGTGGCGGAATGGACCACCGGAGAAGCCAGTGCTATGCAATGCATGTGGATCCAGATGGAGAACAAAAGG
TACACTAGCAAATTACACACCATTGCATGCTCGAGCCTTTGAAGCCACAGATTCTTCAGATTATAAATGTGGGCATGGTAAAAAAGGATTACAAAACCCCAAACAACAAAGATCCAACAAAAGGAAAGAACCAGGTCAAGATGTTGAGTTTGGAGTTCTGGAATCAGACCCACAGTATGCAATGGGTGTCGAGGAGGATG
CTAGTAACAGGTCAAGCTCAGGGTCAGGGATATCATACTCTGAAGGGTGCATTCAATACGGTGGCACAGTTGGAATGGATAGTACAGGTTCTTTTCATACCCCTGCATGGGATTCACCCATTCCTTCAAAAAAGCGTACTTGCATGTATCGCAAGAGACCATCTTCAGTTGGAAAACTAATGAAAGGCTTGCGGTATATT
TTGCATGAACAAGATTCATCTTACCTATCAGGGTCCTCAGAGGATCTGCTCTTTGCCTGCAAAGATCCGATGGTTTCCACTGAGATAGGACTTGGCAGTGTATTTATTAGGCAACCACAGTCAGGAACATGTGAAGAGGAGTCAGAGgcaagttcactgttggttgaaaataaaggatacaatacatttgatgttgtaac
tcaggctgattctggagcagtaacctactctgcacagCTTCAAAAAGAGGATAAATATTTGACCGAGAGAGAGAAGGAAAAGGTGAAACAATTGCAGGAATATTCAGATAAACACTATGGGCCTAACAAAGTACTTGCGGAGAATTTCCCTTATAACAAGCATGGTGTTCTGCAAAGTTGTCATTCGCCCCTGATTTTTG
TGGACCTGAAAGATATAGTAAACTTTGATTCATTTATGGGGATCATGACGGTACAAGAACAAACACAGTTAATGGATTATGTCTCATCTGTTGATATTGCCAGAGTTCCTGAAAGCCTACACTGCATGTTTAAGAGTGGACAATTTGAAGAGGCGTTAACCAACTTTCAGCAGCTACTTTCTGAAGGCATGTTTGACATT
TACATGTCGGGATTAGACCCTCAACTAAAGCAGATTTTACAAAAACTGATAATCACAGATCTGACAAACACTAAATGGATAGAGAGATATCATCAAACTGAAAATCAGAGTAAGCGTAGAAGGGTGCTTGATTCTGCAAAAGTTGTACAAAATAAAATATCAACAAAGTCAAAGGGATCATGTTTATCTTCCAAGTCTGG
CACATATTTAGCAGGCAAGAAATCTTTGGACTGGCAACCCTATCAAATTGTTACAGGATCAGATGATTGTATGCAAAGCCCTGGGAACTTGCAAAAGAGTAGAAATGAAAATTCTTACCATGCAAATGAAGATATAAGATGTACATCCAAGGGTGACTTGAAATTTGATATTGAGCCAAAGTATGAGCCTTGCTTTAGTC
CCAGAAGCTTATTTGCATCACCTTTGGAAAGGAGTTCTCTACTAGATTATAAAGGAACTCCTGGAAGAGAATGTTTCGAATGGGATTTGCTTTTAGATGTTCCTTCAAACATCTCCTTTCAACATGCTGAGATTTTGCATTCCCCAGTGTGGAAATGCAAAGGCTTTAAGGATTCCATGACTGATGCAAACAACCTTGAG
AATCCAAACAATGAAGAAGAAATGGCTAGTAATCTGTGGGGTTCAGAGGATAACTTAGAATGGAGTTCCCTATTTTGGAACCCTCCAAATGTCCCATCCGGACAAACATTGCCCAATGGAGCTACACTATATTCTGGGAAAAGGCTTCCTTGAATTGTATGTTGCTTGTGTATCTTTTGTGTATTTGACACTTCTATAGT
TTTTAATCCCCTACCCGAAGGTCACTTTAAGAGGTGAATATGTTATCATGAAGATTTGATCAAGAGTGTATGATAAATGGTCTAGGTCCTTGAGCAAATGATAATGTTGAGTAGTTTGGGCTTTGTAAAGTGTGAGAGTGCTATTATATATATAGACAACAAATAACAAATAAAAGTGAAAGTGCCTTGCACTTGTCAAT
GCGTA
Intron 2 GTGTGTATAT ... ATTTGGCAAG
Found issues: Low number of reads
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 42.86 | 6 | 4 | 5 |
| A2 | 66.67 | 2 | 2 | 6 |
| A3 | 30.43 | 8 | 7 | 0 |
| A4 | 38.46 | 8 | 4 | 6 |
| A5 | 23.81 | 8 | 1 | 4 |
| A6 | 100 | 0 | 5 | 4 |
| A7 | 38.46 | 4 | 4 | 1 |
| A8 | 55.56 | 2 | 5 | 0 |
| A9 | 100 | 0 | 5 | 4 |
| A10 | 60 | 1 | 0 | 3 |
>TRINITY_DN82283_c0_g1_i2 from sample A4 / Example spliced isoformCGGGCATTGAGAGCTCCGGTAAGCTCCATTTTCAGAGCTTGGAAGCCATTTTTTCGTCCGCAAATCTACTGATTTCAATCTACGCTCAATTTTCATACATTCTTCAGCTCGCAAGCTTTCAATCTGTGGTAGATTTGTGGATTTTGGTAAAGTGTGTGAATTTCTGTAATTTTTCAAAGTCATCACTGTCGGCCGTGGAC
TTTTACCTGTGGGAGCTGTTATTATTAGCGGTGCTATTTTGCATGTTGTGGGGGCACAGTTGCAAAGTTAGCAGAGGAACATGGGCAAGCAGGGTCCTTGCTACCATTGTGGGATTACCTACACTCCTCTGTGGCGGAATGGACCACCGGAGAAGCCAGTGCTATGCAATGCATGTGGATCCAGATGGAGAACAAAAGGT
ACACTAGCAAATTACACACCATTGCATGCTCGAGCCTTTGAAGCCACAGATTCTTCAGATTATAAATGTGGGCATGGTAAAAAAGGATTACAAAACCCCAAACAACAAAGATCCAACAAAAGGAAAGAACCAGGTCAAGATGTTGAGTTTGGAGTTCTGGAATCAGACCCACAGTATGCAATGGGTGTCGAGGAGGATGC
TAGTAACAGGTCAAGCTCAGGGTCAGGGATATCATACTCTGAAGGGTGCATTCAATACGGTGGCACAGTTGGAATGGATAGTACAGGTTCTTTTCATACCCCTGCATGGGATTCACCCATTCCTTCAAAAAAGCGTACTTGCATGTATCGCAAGAGACCATCTTCAGTTGGAAAACTAATGAAAGGCTTGCGGTATATTT
TGCATGAACAAGATTCATCTTACCTATCAGGGTCCTCAGAGGATCTGCTCTTTGCCTGCAAAGATCCGATGGTTTCCACTGAGATAGGACTTGGCAGTGTATTTATTAGGCAACCACAGTCAGGAACATGTGAAGAGGAGTCAGAGGCAAGTTCACTGTTGGTTGAAAATAAAGGATACAATACATTTGATGTTGTAACT
CAGGCTGATTCTGGAGCAGTAACCTACTCTGCACAGCTTCAAAAAGAGGATAAATATTTGACCGAGAGAGAGAAGGAAAAGGTGAAACAATTGCAGGAATATTCAGATAAACACTATGGGCCTAACAAAGTACTTGCGGAGAATTTCCCTTATAACAAGCATGGTGTTCTGCAAAGTTGTCATTCGCCCCTGATTTTTGT
GGACCTGAAAGATATAGTAAACTTTGATTCATTTATGGGGATCATGACGGTACAAGAACAAACACAGTTAATGGATTATGTCTCATCTGTTGATATTGCCAGAGTTCCTGAAAGCCTACACTGCATGTTTAAGAGTGGACAATTTGAAGAGGCGTTAACCAACTTTCAGCAGCTACTTTCTGAAGGCATGTTTGACATTT
ACATGTCGGGATTAGACCCTCAACTAAAGCAGATTTTACAAAAACTGATAATCACAGATCTGACAAACACTAAATGGATAGAGAGATATCATCAAACTGAAAATCAGAGTAAGCGTAGAAGGGTGCTTGATTCTGCAAAAGTTGTACAAAATAAAATATCAACAAAGTCAAAGGGATCATGTTTATCTTCCAAGTCTGGC
ACATATTTAGCAGGCAAGAAATCTTTGGACTGGCAACCCTATCAAATTGTTACAGGATCAGATGATTGTATGCAAAGCCCTGGGAACTTGC
>TRINITY_DN82283_c0_g1_i1 from sample A4 / Example unspliced isoform:CGGGCATTGAGAGCTCCGGTAAGCTCCATTTTCAGAGCTTGGAAGCCATTTTTTCGTCCGCAAATCTACTGATTTCAATCTACGCTCAATTTTCATACATTCTTCAGCTCGCAAGCTTTCAATCTGTGGTAGATTTGTGGATTTTGGTAAAGTGTGTGAATTTCTGTAATTTTTCAAAGTCATCACTGTCGGCCGTGGAC
TTTTgtgtgtatatactaagccctttgtccattgaatatttgagctgttgtgtggatttgcaattcaatataaagcacaaaacaaaaacattcttgtttagatttttatattttcctctatttttcttctctaaatttggcaagACCTGTGGGAGCTGTTATTATTAGCGGTGCTATTTTGCATGTTGTGGGGGCACAGT
TGCAAAGTTAGCAGAGGAACATGGGCAAGCAGGGTCCTTGCTACCATTGTGGGATTACCTACACTCCTCTGTGGCGGAATGGACCACCGGAGAAGCCAGTGCTATGCAATGCATGTGGATCCAGATGGAGAACAAAAGGTACACTAGCAAATTACACACCATTGCATGCTCGAGCCTTTGAAGCCACAGATTCTTCAGAT
TATAAATGTGGGCATGGTAAAAAAGGATTACAAAACCCCAAACAACAAAGATCCAACAAAAGGAAAGAACCAGGTCAAGATGTTGAGTTTGGAGTTCTGGAATCAGACCCACAGTATGCAATGGGTGTCGAGGAGGATGCTAGTAACAGGTCAAGCTCAGGGTCAGGGATATCATACTCTGAAGGGTGCATTCAATACGG
TGGCACAGTTGGAATGGATAGTACAGGTTCTTTTCATACCCCTGCATGGGATTCACCCATTCCTTCAAAAAAGCGTACTTGCATGTATCGCAAGAGACCATCTTCAGTTGGAAAACTAATGAAAGGCTTGCGGTATATTTTGCATGAACAAGATTCATCTTACCTATCAGGGTCCTCAGAGGATCTGCTCTTTGCCTGCA
AAGATCCGATGGTTTCCACTGAGATAGGACTTGGCAGTGTATTTATTAGGCAACCACAGTCAGGAACATGTGAAGAGGAGTCAGAGGCAAGTTCACTGTTGGTTGAAAATAAAGGATACAATACATTTGATGTTGTAACTCAGGCTGATTCTGGAGCAGTAACCTACTCTGCACAGCTTCAAAAAGAGGATAAATATTTG
ACCGAGAGAGAGAAGGAAAAGGTGAAACAATTGCAGGAATATTCAGATAAACACTATGGGCCTAACAAAGTACTTGCGGAGAATTTCCCTTATAACAAGCATGGTGTTCTGCAAAGTTGTCATTCGCCCCTGATTTTTGTGGACCTGAAAGATATAGTAAACTTTGATTCATTTATGGGGATCATGACGGTACAAGAACA
AACACAGTTAATGGATTATGTCTCATCTGTTGATATTGCCAGAGTTCCTGAAAGCCTACACTGCATGTTTAAGAGTGGACAATTTGAAGAGGCGTTAACCAACTTTCAGCAGCTACTTTCTGAAGGCATGTTTGACATTTACATGTCGGGATTAGACCCTCAACTAAAGCAGATTTTACAAAAACTGATAATCACAGATC
TGACAAACACTAAATGGATAGAGAGATATCATCAAACTGAAAATCAGAGTAAGCGTAGAAGGGTGCTTGATTCTGCAAAAGTTGTACAAAATAAAATATCAACAAAGTCAAAGGGATCATGTTTATCTTCCAAGTCTGGCACATATTTAGCAGGCAAGAAATCTTTGGACTGGCAACCCTATCAAATTGTTACAGGATCA
GATGATTGTATGCAAAGCCCTGGGAACTTGC