NA ----> NA
Intron 1 GTAGGTTATG ... GTTACTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 87.5 | 4 | 28 | 14 |
| A2 | 63.89 | 13 | 23 | 8 |
| A3 | 81.97 | 11 | 50 | 5 |
| A4 | 83.33 | 2 | 10 | 2 |
| A5 | 70.83 | 7 | 17 | 11 |
| A6 | 80.41 | 67 | 275 | 20 |
| A7 | 75.81 | 60 | 188 | 28 |
| A8 | 81.44 | 62 | 272 | 29 |
| A9 | 80.98 | 70 | 298 | 23 |
| A10 | 75.86 | 63 | 198 | 36 |
>TRINITY_DN117442_c2_g9_i2 from sample A2 / Example spliced isoformGGGGATACGGTCGTGCGCAGGCCAAACTCTAAATCGCTCCGAACTAGGGTTATGTCTAAATCGTTCCGAACTAGGGTTAGGGTTTTGACATAACCTCAAGTTGCGCAAACTCTATATCGCTCCGGACTACGGTTAGGGTTTCAACAGAACCTCAAGCCACCCTCGCGACCTTGCTTGCTTACCAGATATTCCTGTGCCTA
TATATTGAAGACCGAAGCCTGGTGCCTTCAGAATGCGTGGATACAATAGCTCAAGTGTCTTTCGTTGACGGTGAGTTCAGCGTATCCAATGCACCACTGCAATATTGTTTTTCTTGTATATCTTCGACCGTGTTTTGTTCCCTCTCTATGTATATTAAAGCTCCTTGTTTATTTCGCCAAGGTTGAAATTATGAAATCAC
ACACCGTATTTCGGATCTTATTGGCTTTATGTATAGCCATGCTGATATTCTGCAATTCCGAGGCCATCTTTTGGATGAAATTCATATCTACCAGGATCAGGTAGTCTGCTGAGCCTTATATGACACACATCTCATCGACCATATTTTTTTATTATCAAATTATTGGCTTTAGAACAGGGCTTGTATATTGTTCCTTGGGC
AAAGTTGAGCCTTGTTTGACTTATTACACACATTTCACC
>TRINITY_DN117442_c2_g9_i5 from sample A2 / Example unspliced isoform:GGGGATACGGTCGTGCGCAGGCCAAACTCTAAATCGCTCCGAACTAGGGTTATGTCTAAATCGTTCCGAACTAGGGTTAGGGTTTTGACATAACCTCAAGTTGCGCAAACTCTATATCGCTCCGGACTACGGTTAGGGTTTCAACAGAACCTCAAGCCACCCTCGCGACCTTGCTTGCTTACCAGATATTCCTGTGCCTA
TATATTGAAGACCGAAGCCTGGTGCCTTCAGAATGCGTGGATACAATAGCTCAAGTgtaggttatgtacatgctattcttgcagattgttttcttagatggagtcaagattgttttcttagatggaatgcataggttttatgtgtgcttccgatttttacctgtgtgaaatttacgagagcaagtcaatgtattgaagcg
ataagcggtcgtatattttgtttattctatcatttttgaagtctgggctttttatagcccatgtgatacaaaattatactgtctaatagtgaatctattacacagctagaatggtaaatctgcaaaacctgaccggccaaaaatgttgttaatagtccaatttgtgtagagatatagaacctagtggatgttaaggaata
tttagttcaataaatacatgctgtataactgcctgggatgaaattgtaaacatatcaccatctttcggaacttattggccgtgctgatcatttacacttctctgaggcaacattttcaaatatttttgtctgatcttttgacaaatcaagaaatactatttttattatgttgtgggtgggttactgtagGTCTTTCGTTG
ACGGTGAGTTCAGCGTATCCAATGCACCACTGCAATATTGTTTTTCTTGTATATCTTCGACCGTGTTTTGTTCCCTCTCTATGTATATTAAAGCTCCTTGTTTATTTCGCCAAGGTTGAAATTATGAAATCACACACCGTATTTCGGATCTTATTGGCTTTATGTATAGCCATGCTGATATTCTGCAATTCCGAGGCCAT
CTTTTGGATGAAATTCATATCTACCAGGATCAGGTAGTCTGCTGAGCCTTATATGACACACATCTCATCGACCATATTTTTTTATTATCAAATTATTGGCTTTAGAACAGGGCTTGTATATTGTTCCTTGGGCAAAGTTGAGCCTTGTTTGACTTATTACACACATTTCACC