sp|A8ISN6|ARL3_CHLRE ----> ADP-ribosylation factor-like protein 3
Intron 1 GTAAGATCTT ... CTTGCTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 19.86 | 42 | 9.2 | 12 |
| A2 | 17.73 | 31 | 7.8 | 6 |
| A3 | 18.25 | 23 | 3.6 | 7 |
| A4 | 28.89 | 20 | 10.4 | 6 |
| A5 | 21.77 | 14 | 5.2 | 3 |
| A6 | 18.93 | 183 | 42.4 | 46 |
| A7 | 19.33 | 144 | 32.8 | 38 |
| A8 | 20.73 | 202 | 52.2 | 55 |
| A9 | 18.16 | 152 | 28.2 | 41 |
| A10 | 23.36 | 120 | 40.6 | 34 |
>TRINITY_DN109034_c0_g3_i5 from sample A4 / Example spliced isoformTGTAAAGGAAACATGCGACCATGTGATCCTCTTCTCTAGTACCACAGTCATAGCAAACCATTACATATTTAAAATCGTCATATAGTTATTTATTTTTATTTAGTAAAAGTTAGGCAATGAAGACTTAACACGATCTCCAAAAAGCCACCAAGGGAATATAGATGCCATCAGATTTCATCTGCTACCTTTCATCATTATCA
TTTCTGTAGATTTACCATCGACTGTGAAGTAGATCTCTTCGCATAAAATTTCACAGGCAGACGTTAAAATTACGGTGGAATCATTGGAAGGCTTGAAGGATGCGTTGTTTTTCGAACTTGGCACGATCTGCTGCACAAGATTGAAGGGAGTGAGTCTTCAGCTTTCTTACACATCCTTATAGTGCTCCTGTTTTGGGGAG
CTGGAATATTATACACCATGGTTGAACAAGAAATTTAATGTTGGACCTTAGAAAGGGGTTCTGCATAAGTCTAGAAGCTCAGAGCTGAAAACAAAAGGCGAAAGTCTATTTTGACGAAAAGGGATGTTTTCATTATTCTATGGATTGTGGAAGTACATCTTCAGTAAAATAGAATTCCATGTCCTTATTCTGGGCATCGA
TAAAGCTGGCAAAACTACATTGCTGGAAAAGCTGAAAACAATGTATTCAGATTCTGAAGGACTCCCACCGGATCGAATTGTTCCAACTGTTGGACTCAACATTGGTCGCGCAGAGGCTTTGAAATCAAAGCTTATTTTTTGGGACTTAGGAGGTCAGATAGGCCTACGTACAATTTGGGAAAAATACTACGAGGAGGCAC
ATGCAGTAATATATGTTGTTGATGCAGCATGCCAGTCACGTTTTGAAGACACAAAGTCTGCTTTAGAAAAGGTTCTCAGGCATGAAGATCTGCAAGGTGCTCCAATTTTGATCTATGCAAATAAGCAGGATCTTCCAGGAGCTGTGACTGCCGAAGAGCTGGCAAGATATTTGGACTTAAAAGAGTTGAATGAAAGGCCA
TATATGTTTCAAGCAATTTCTGCATATGATGGGTTGGGGGTCAAAGATGGGATAAATTGGTTAGTTGATGCTATGGAAAGAAGTAAACGCTTTGAAGTATTAAGGCAGCGGGCAGATGTGGCTGTTGCTGTATAGAAGTGTTTCCTTCAGATCCCAGAGTGTTCTATAATGCGTTGTTTCTAACATTTGGTCTTCAAAAT
ATCCTGGAATGTATCAAGTATTTGCCAGGGTCACGTGGAATGTTTTGTCTCTAATGTTTTATGGGGTTACCAAGTTCAACTTATTGGAGTTCTGACTTCAATTTGATATTTGATTATAATGCTTTTGGAAGTTTATTTTCAATGCTCATCTGCAGATGTTTGTCTCATGTATGCCATATTCATTTTATATAAATGGGCAT
AGAATGTTGTAATTTTTCAGCAGAGTGAAATGTTGTTTACAATATTCATA
>TRINITY_DN109034_c0_g3_i7 from sample A4 / Example unspliced isoform:TGGATGCTCTGGCCATCTTTATCTGGTCTATTAAGTTTGTGATAATGATGTCTCTTTTTCACTTATTCAACTTCATAAGATAGCTATGGTTATATGTTCATCACAGGATCTTCCAGGAGCTGTGACTGCCGAAGAGCTGGCAAGATATTTGGACTTAAAAGAGTTGAATGAAAGGCCATATATGTTTCAAGCAATTTCTG
CATATGATGGgtaagatcttaaatgtaaaatgtagatgtaaaatttctccatgtggcttgcccaattccatgttgaaagttaaaatagccacacttggagaaaataaaataattgaagtactggatgtttattgttaatatcatggtttctgcacaaatattcttgctacagGTTGGGGGTCAAAGATGGGATAAATTGG
TTAGTTGATGCTATGGAAAGAAGTAAACGCTTTGAAGTATTAAGGCAGCGGGCAGATGTGGCTGTTGCTGTATAGAAGTGTTTCCTTCAGATCCCAGAGTGTTCTATAATGCGTTGTTTCTAACATTTGGTCTTCAAAATATCCTGGAATGTATCAAGTATTTGCCAGGGTCACGTGGAATGTTTTGTCTCTAATGTTTT
ATGGGGTTACCAAGTTCAACTTATTGGAGTTCTGACTTCAATTTGATATTTGATTATAATGCTTTTGGAAGTTTATTTTCAATGCTCATCTGCAGATGTTTGTCTCATGTATGCCATATTCATTTTATATAAATGGGCATAGAATGTTGTAATTTTTCAGCAGAGTGAAATGTTGTTTACAATATTCATA
Intron 2 GTAAATTTTC ... TTGATGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 37.59 | 40 | 18.2 | 30 |
| A2 | 25 | 51 | 19 | 15 |
| A3 | 28.29 | 40 | 16.6 | 15 |
| A4 | 28.24 | 47 | 13 | 24 |
| A5 | 23.08 | 15 | 6 | 3 |
| A6 | 19.63 | 156 | 43.2 | 33 |
| A7 | 26.41 | 174.8 | 70.5 | 55 |
| A8 | 34.89 | 92 | 61.6 | 37 |
| A9 | 23.74 | 132 | 46.2 | 36 |
| A10 | 24.75 | 138.8 | 47.3 | 44 |
>TRINITY_DN109034_c0_g3_i5 from sample A4 / Example spliced isoformTGTAAAGGAAACATGCGACCATGTGATCCTCTTCTCTAGTACCACAGTCATAGCAAACCATTACATATTTAAAATCGTCATATAGTTATTTATTTTTATTTAGTAAAAGTTAGGCAATGAAGACTTAACACGATCTCCAAAAAGCCACCAAGGGAATATAGATGCCATCAGATTTCATCTGCTACCTTTCATCATTATCA
TTTCTGTAGATTTACCATCGACTGTGAAGTAGATCTCTTCGCATAAAATTTCACAGGCAGACGTTAAAATTACGGTGGAATCATTGGAAGGCTTGAAGGATGCGTTGTTTTTCGAACTTGGCACGATCTGCTGCACAAGATTGAAGGGAGTGAGTCTTCAGCTTTCTTACACATCCTTATAGTGCTCCTGTTTTGGGGAG
CTGGAATATTATACACCATGGTTGAACAAGAAATTTAATGTTGGACCTTAGAAAGGGGTTCTGCATAAGTCTAGAAGCTCAGAGCTGAAAACAAAAGGCGAAAGTCTATTTTGACGAAAAGGGATGTTTTCATTATTCTATGGATTGTGGAAGTACATCTTCAGTAAAATAGAATTCCATGTCCTTATTCTGGGCATCGA
TAAAGCTGGCAAAACTACATTGCTGGAAAAGCTGAAAACAATGTATTCAGATTCTGAAGGACTCCCACCGGATCGAATTGTTCCAACTGTTGGACTCAACATTGGTCGCGCAGAGGCTTTGAAATCAAAGCTTATTTTTTGGGACTTAGGAGGTCAGATAGGCCTACGTACAATTTGGGAAAAATACTACGAGGAGGCAC
ATGCAGTAATATATGTTGTTGATGCAGCATGCCAGTCACGTTTTGAAGACACAAAGTCTGCTTTAGAAAAGGTTCTCAGGCATGAAGATCTGCAAGGTGCTCCAATTTTGATCTATGCAAATAAGCAGGATCTTCCAGGAGCTGTGACTGCCGAAGAGCTGGCAAGATATTTGGACTTAAAAGAGTTGAATGAAAGGCCA
TATATGTTTCAAGCAATTTCTGCATATGATGGGTTGGGGGTCAAAGATGGGATAAATTGGTTAGTTGATGCTATGGAAAGAAGTAAACGCTTTGAAGTATTAAGGCAGCGGGCAGATGTGGCTGTTGCTGTATAGAAGTGTTTCCTTCAGATCCCAGAGTGTTCTATAATGCGTTGTTTCTAACATTTGGTCTTCAAAAT
ATCCTGGAATGTATCAAGTATTTGCCAGGGTCACGTGGAATGTTTTGTCTCTAATGTTTTATGGGGTTACCAAGTTCAACTTATTGGAGTTCTGACTTCAATTTGATATTTGATTATAATGCTTTTGGAAGTTTATTTTCAATGCTCATCTGCAGATGTTTGTCTCATGTATGCCATATTCATTTTATATAAATGGGCAT
AGAATGTTGTAATTTTTCAGCAGAGTGAAATGTTGTTTACAATATTCATA
>TRINITY_DN109034_c0_g3_i8 from sample A4 / Example unspliced isoform:TGTAAAGGAAACATGCGACCATGTGATCCTCTTCTCTAGTACCACAGTCATAGCAAACCATTACATATTTAAAATCGTCATATAGTTATTTATTTTTATTTAGTAAAAGTTAGGCAATGAAGACTTAACACGATCTCCAAAAAGCCACCAAGGGAATATAGATGCCATCAGATTTCATCTGCTACCTTTCATCATTATCA
TTTCTGTAGATTTACCATCGACTGTGAAGTAGATCTCTTCGCATAAAATTTCACAGGCAGACGTTAAAATTACGGTGGAATCATTGGAAGGCTTGAAGGATGCGTTGTTTTTCGAACTTGGCACGATCTGCTGCACAAGATTGAAGGGAGTGAGTCTTCAGCTTTCTTACACATCCTTATAGTGCTCCTGTTTTGGGGAG
CTGGAATATTATACACCATGGTTGAACAAGAAATTTAATGTTGGACCTTAGAAAGGGGTTCTGCATAAGTCTAGAAGCTCAGAGCTGAAAACAAAAGGCGAAAGTCTATTTTGACGAAAAGGGATGTTTTCATTATTCTATGGATTGTGGAAGTACATCTTCAGTAAAATAGAATTCCATGTCCTTATTCTGGGCATCGA
TAAAGCTGGCAAAACTgtaaattttctttcttttcaaattaattcaatttaaaattctgtttctagtgatgtgggtgccttgctcaacaccccctggtatggtgttttggttaaggatccatatccacaggtaaaaggttttgttgagttgcatttgaactgaataataggaatccaggaaagatttgattgttcgcatt
aatcctagttcaaggactgttttgcccagtagattataagtaatatatttatggtgttctcttttatgtttttttttataattcctttgtccagtttaagaacctctgataaggttatgttcttattttatgatttatggatgtttgtggcttggattgtgttcatgttttgatgatagACATTGCTGGAAAAGCTGAAA
ACAATGTATTCAGATTCTGAAGGACTCCCACCGGATCGAATTGTTCCAACTGTTGGACTCAACATTGGTCGCGCAGAGGCTTTGAAATCAAAGCTTATTTTTTGGGACTTAGGAGGTCAGGTATGTTTAGAATCTTAGATACAAATATTAGAAAAAAAATTC
Intron 3 GTGAGAGTTA ... AACTAAACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 30.28 | 33 | 14.8 | 13.4 |
| A2 | 26.98 | 27.4 | 10.2 | 3.4 |
| A3 | 15.69 | 44 | 8.4 | 8.8 |
| A4 | 29.16 | 41.8 | 17.4 | 9 |
| A5 | 12.5 | 14 | 2 | 5 |
| A6 | 11.13 | 196.4 | 24.8 | 16.4 |
| A7 | 18.28 | 215.4 | 49 | 17.4 |
| A8 | 19.74 | 159 | 40.4 | 9 |
| A9 | 13.73 | 188.6 | 30.4 | 13 |
| A10 | 15.1 | 118 | 21.4 | 7.6 |
>TRINITY_DN109034_c0_g3_i5 from sample A4 / Example spliced isoformTGTAAAGGAAACATGCGACCATGTGATCCTCTTCTCTAGTACCACAGTCATAGCAAACCATTACATATTTAAAATCGTCATATAGTTATTTATTTTTATTTAGTAAAAGTTAGGCAATGAAGACTTAACACGATCTCCAAAAAGCCACCAAGGGAATATAGATGCCATCAGATTTCATCTGCTACCTTTCATCATTATCA
TTTCTGTAGATTTACCATCGACTGTGAAGTAGATCTCTTCGCATAAAATTTCACAGGCAGACGTTAAAATTACGGTGGAATCATTGGAAGGCTTGAAGGATGCGTTGTTTTTCGAACTTGGCACGATCTGCTGCACAAGATTGAAGGGAGTGAGTCTTCAGCTTTCTTACACATCCTTATAGTGCTCCTGTTTTGGGGAG
CTGGAATATTATACACCATGGTTGAACAAGAAATTTAATGTTGGACCTTAGAAAGGGGTTCTGCATAAGTCTAGAAGCTCAGAGCTGAAAACAAAAGGCGAAAGTCTATTTTGACGAAAAGGGATGTTTTCATTATTCTATGGATTGTGGAAGTACATCTTCAGTAAAATAGAATTCCATGTCCTTATTCTGGGCATCGA
TAAAGCTGGCAAAACTACATTGCTGGAAAAGCTGAAAACAATGTATTCAGATTCTGAAGGACTCCCACCGGATCGAATTGTTCCAACTGTTGGACTCAACATTGGTCGCGCAGAGGCTTTGAAATCAAAGCTTATTTTTTGGGACTTAGGAGGTCAGATAGGCCTACGTACAATTTGGGAAAAATACTACGAGGAGGCAC
ATGCAGTAATATATGTTGTTGATGCAGCATGCCAGTCACGTTTTGAAGACACAAAGTCTGCTTTAGAAAAGGTTCTCAGGCATGAAGATCTGCAAGGTGCTCCAATTTTGATCTATGCAAATAAGCAGGATCTTCCAGGAGCTGTGACTGCCGAAGAGCTGGCAAGATATTTGGACTTAAAAGAGTTGAATGAAAGGCCA
TATATGTTTCAAGCAATTTCTGCATATGATGGGTTGGGGGTCAAAGATGGGATAAATTGGTTAGTTGATGCTATGGAAAGAAGTAAACGCTTTGAAGTATTAAGGCAGCGGGCAGATGTGGCTGTTGCTGTATAGAAGTGTTTCCTTCAGATCCCAGAGTGTTCTATAATGCGTTGTTTCTAACATTTGGTCTTCAAAAT
ATCCTGGAATGTATCAAGTATTTGCCAGGGTCACGTGGAATGTTTTGTCTCTAATGTTTTATGGGGTTACCAAGTTCAACTTATTGGAGTTCTGACTTCAATTTGATATTTGATTATAATGCTTTTGGAAGTTTATTTTCAATGCTCATCTGCAGATGTTTGTCTCATGTATGCCATATTCATTTTATATAAATGGGCAT
AGAATGTTGTAATTTTTCAGCAGAGTGAAATGTTGTTTACAATATTCATA
>TRINITY_DN109034_c0_g3_i1 from sample A4 / Example unspliced isoform:AATACTATGATCTTTAAAGAGTTTGTGGATTAAGTGTATTTTCCTAGCTTAGTTCTCATGAAACACTTACAACACTGTTCTTAATTTTTAACTTGAATAATTTTATTCTCTGAAATTTCTGTCTTGTAACTGGCACCATATATGGCCCTTTTTGAATATTACTGCCAGGCATAGAAAGTAAACTTTGTCACCATTTCTCT
GTATTTTGGTTGCAAGATGTGCATGAATGGAGAGTTTTACTCTCATTGTTGCATACTTATCACATGAAATAACTTGTATTATATTATGTTTTTCTGGTTCCATTGTTGTATTATTCAATAGAAGTGGTCTATAAGATAGTCCATTCTTCAGATAATGGAAATTCATTTCCAGCATTTAGCCACAGTGGACTTCCATGGAG
TCTTTGATGCCCATCCCTTATGGTACCATGTCAAGTAATCAGTGCTTCGTCTTTCACTTGACAGATAGGCCTACGTACAATTTGGGAAAAATACTACGAGGAGGCACATGCAGTAATATATGTTGTTGATGCAGCATGCCAGTCACGTTTTGAAGACACAAAGTCTGCTTTAGgtgagagttagatttcataaatatttt
tttacaggttttcttgttatttttttacagaagccacgttttaattttagggtgccaactatggtgtgatacaagtcctaaatgcgatgccttgtggcatttttatggtttgggatagttcatggctagacttcaacatttttaattttgttattttaatttaacctattctgtgtaactaaacagAAAAGGTTCTCAGG
CATGAAGATCTGCAAGGTGCTCCAATTTTGATCTATGCAAATAAGCAGGATCTTCCAGGAGCTGTGACTGCCGAAGAGCTGGCAAGATATTTGGACTTAAAAGAGTTGAATGAAAGGCCATATATGTTTCAAGCAATTTCTGCATATGATGGGT