sp|Q9LUR0|CNDH2_ARATH ----> Condensin-2 complex subunit H2
Intron 1 GTGAAGCTCC ... TGATTTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 14 | 8 | 6 |
| A2 | 33.33 | 11 | 10 | 1 |
| A3 | 28.89 | 16 | 8 | 5 |
| A4 | 23.64 | 21 | 10 | 3 |
| A5 | 22.22 | 7 | 4 | 0 |
| A6 | 28.57 | 10 | 7 | 1 |
| A7 | 24 | 38 | 14 | 10 |
| A8 | 18.75 | 13 | 6 | 0 |
| A9 | 22.89 | 32 | 8 | 11 |
| A10 | 25 | 30 | 14 | 6 |
>TRINITY_DN124815_c0_g1_i18 from sample A1 / Example spliced isoformCGCAGAGTTTCTCGGGTTTTCTTCAATTATTGTATTTTTCCTCTGTTCTGTTCTGGCTGGGGTTCTGCTGCCTGGACGGTCTATCCATTCTGACTGAAGCTCCGCCCGCATTTTGCATATCATTTTGCTCTGGAGTCTCGGATGCTCCCACGCCAACGGCAGGTTTCCAAGTTTCCGTCTTCTAAAATTTGCAGACGGTG
AAGTCCCAGAGCTACTTTAAAACGCTTTGAGGAAAAAAACAGAAAAAACCCCAGCAAAAAACGGATGAGTGAAGAGTAGCTATGGAGGGTTTAAGATGACAGGGAAGGGTAAAGATAGAGATCAAGAGCAAGAGCCTCCTCCTTCTGAGTTGAGTTTTATTCATCTCTTGCAGCCAAACAACAGAGATTTGGCTGCAAAC
TGGGCCGTGGATGTAGGTCGAGAGCTCGACAACTACTTGGCCCAACTCTCAGTTGCTGCACTTTTCCAAGACGGGACCTCTTCTCTAAATTTTGCTCAAGCCGCTTTATTGATACAAGGATCAATACAGATATACAGCAGAAAGGTTGAATACCTGTATGCTCTTGTCCTGCAAGCTTTGGAGTTCATAGCCCAAAAAAA
ACAAGCTCAGCAGGAGAAGAGCTCCATCCAGGCAGATGGAAAGGATGCTGATATTATTGAAGAGGGCGAAGAGGAATTCCTTAACTTGGATGATGTGCAAGAGGAAACAAACATCGATATTGATGATGAGGGACAAGAAGCTAGTGCATTGACTCCTGCAGTCAAACCTCCAGCTAGTTTGCTTGTTTTAGAAGGAGAAG
CTGTAGACATTGGTGGAGATGGAGGAGAACTTGCTGCTTATCAGATTGCCACTAGCAGCCTTCACAGGGATTTTCTTCTATTGGATCCTTGTGATGCTGATGCTGTCGATAAATATCTGAATGTTAATAAGGCTGCTGCTAATGGAACTCCAAATCACCTTTCTGGCTCGGCACGCCGTAGGACTCCTAGGACACCAAAA
AATGGATTTTCTACACCAGGCAAAAGAGCTGGGTCTGTCCAGAAATCTGTGCTTTCAAAGGGGCCCCAGAGTGCAATAAAGCAGCCTGAGTTTAATGAGGTGGGCTGTAGCCAGGGTGCCCATGACATCTGGGACAGGACATCTTCGGGAATATGTGAAGCACCCTTTGTACAGGATCTGGGGAATGACAAGACCAATGA
CTTTTGTTCATCGCATAAAGGCTTTGATGAAGGTGGTTTTGGAGGGCAGGCTGGTGTTGAAGATGACTTTGAGGATGATGAAGATGATCCTTGGCAACCTTTGAACCCCCATGAACCTGGGGATTTACTTGTGAAACCATATAGACGAGGGTTATTATCAAAGAAACAAAAGGTCAGGGATGCTGATCAGGTTGCCATTG
TGCTTGAATTTCCTTTGGCAAGAAGGTTTAGCATGATTTGTCCAGAGTTTACAAAAGTGTCCAAGACTGGGGACTGTAATATTAATGGAAAATCAACCTTGCACTCACCTCCTATATATGAAAAGCTAAGGAGCTCTATGACTTTGAATCAAAGCTCTTCTTTTGATGGACCTGGGTCTCCCAGTGATGATGATCAGGGA
ATTGGTGTTGAACATGATTTTGAGGACCTTGACATATTCGGTGACTATCTTGGGGAATCAAATAACAGCATTGCTGAAGCTGAAAACCCAACACTGCCTCAGGAGCACTATGATGATGGCAATCTTACTGGAAATGATGGTCTTCCCTACCAAGAGAAGGATTTTGATACCGGGGCAAGCTTTGAAGATCTCTGCCGAGC
ACATCTGGATGCTCTTTTGCGCAACATAGCTGAATCGCAAAAGCAGACAGAACTGGCAAGCAGAGTTTCAACCTGGAAGCAGAATATTGAAAAGAATCTTGAAGAGCAGGATTCTCGTCCTCCTTTTGATATCCATGTATATGGTGAAAGGGTGCTAGATGCATTCTCTTCATCTTCAAATGAGGAGCATGAGAATAGAA
GTGGAGTGCAGATGTCATTTACAGAGATAGTTGGTGGTCAAGAGAGGCATGAAGTTGCTAGAACATTTGCTGCACTTCTACAGCTGGTGAACAATGGCAATGTTGCACTTGAAAAAGGTATTTCAGGAGGTCAACCCTTCTGTTTCACTGCAGAAAAGCCATTCTTTGTAAGGCTTCTGAGTAGTAGCAGAAGACATGAG
GAAATGCTTCAATACAGAGCACCCTCGATGGCTACACCAGCAAAGAAGGCATCAAAGAAGAGTAAAAATAAGTCCCCCTTGGACCGTCAAGCAGGTATTAGAATTACAGAAAATAAGGATTCTAACAGTAAATTTTCAGATATGGATAGTTGTAGTAAATTATTAACCTCTAAGAGTAAAGATGTAGGGAAACAAAGGGT
AGGAAGTGCTCTAAGGTCAGGGACAAATTATGAAAGCAACCATTCTGCTGATGTGGGCAGAAAAACACCTGGATCTGCATCCAGGTTTACTCCAGAAAACAAAAGGCGTCGAAGACTTCAGTCGGTTAGACCAATTGAAATTCAAGTAGAAAGATAAAGTCAGTCCACCATGGGAGACTGTTATTTAAGTTATTGTATGT
GGGATATGATATTGGTGTTAACTTTTAATGCAATCTACTACAATCTACTGTGGGCTATTTTCAGTGTAAGCAGCTATCAAGGACTCCATTCTATGACTTTGCATTCTTCACTGCAATTGCAAGAGCACCTTCTTCATTCATCATTTAGAGGTGGTTGAGATTTTTCTGTGATTGTCTTAATTAATTCAACCTCGTTGTGG
AGTTGTTCCAATTATGTAGGAATGCAGTAAGCCTCAATATGTCTAGATTTGGTTTGAAGAACAGATCTTGAGATGTTTGAAATCTTAAGTGCTTTGATGAATGGTCGCATCATTCACCTAATCAATTGATCAATCGATAATGGTGGCTTATTAATGATCCTTACTGCTCAATACGACAAAAAAGGTACACTGCCACCTCT
CTTTAAAATGCATTGTCTCTGTAGCAATACCGGCACAATGTTATGGGCCTTGTCTTTAATAAAATATTTAAATGTGGTGCTGATTGTTTCAGTCTTTCATTATCTAATAACATGTGTGTGTGTGGAATCACTGTGGATTGCAA
>TRINITY_DN124815_c0_g1_i16 from sample A1 / Example unspliced isoform:CCGCTTTATTGATACAAGGATCAATACAGATATACAGCAGAAAGGTTGAATACCTGTATGCTCTTGTCCTGCAAGCTTTGGAGTTCATAGCCCAAAAAAAACAAGCTCAGCAGGAGAAGAGCTCCATCCAGGCAGATGGAAAGGATGCTGATATTATTGAAGAGGGCGAAGAGGAATTCCTTAACTTGGATGATGTGCAA
GAGGAAACAAACATCGATATTGATGATGAGGGACAAGAAGCTAGTGCATTGACTCCTGCAGTCAAACCTCCAGCTAGTTTGCTTGTTTTAGAAGGAGAAGCTGTAGACATTGGTGGAGATGGAGGAGAACTTGCTGCTTATCAGATTGCCACTAGCAGCCTTCACAGGGATTTTCTTCTATTGGATCCTTGTGATGCTGA
TGCTGTCGATAAATATCTGAATGTTAATAAGGCTGCTGCTAATGGAACTCCAAATCACCTTTCTGGCTCGGCACGCCGTAGGACTCCTAGGACACCAAAAAATGGATTTTCTACACCAGGCAAAAGAGCTGGGTCTGTCCAGAAATCTGTGCTTTCAAAGGGGCCCCAGAGTGCAATAAAGCAGCCTGAGTTTAATGAGG
TGGGCTGTAGCCAGGGTGCCCATGACATCTGGGACAGGACATCTTCGGGAATATGTGAAGCACCCTTTGTACAGGATCTGGGGAATGACAAGACCAATGACTTTTGTTCATCGCATAAAGGCTTTGATGAAGGTGGTTTTGGAGGGCAGGCTGGTGTTGAAGATGACTTTGAGGATGATGAAGATGATCCTTGGCAACCT
TTGAACCCCCATGAACCTGGGGATTTACTTGTGAAACCATATAGACGAGgtgaagctccagaggtagcattgggtttagagaattttgttagtgctgtaatagtaaaatatatgttgccattctaggatttcttgatttattttgggatgcctttttgatttgtagGGTTATTATCAAAGAAACAAAAGGTCAGGGATGC
TGATCAGGTTGCCATTGTGCTTGAATTTCCTTTGGCAAGAAGGTTTAGCATGATTTGTCCAGAGTTTACAAAAGTGTCCAAGACTGGGGACTGTAATATTAATGGAAAATCAACCTTGCACTCACCTCCTATATATGAAAAGCTAAGGAGCTCTATGACTTTGAATCAAAGCTCTTCTTTTGATGGACCTGGGTCTCCCA
GTGATGATGATCAGGGAATTGGTGTTGAACATGATTTTGAGGACCTTGACATATTCGGTGACTATCTTGGGGAATCAAATAACAGCATTGCTGAAGCTGAAAACCCAACACTGCCTCAGGAGCACTATGATGATGGCAATCTTACTGGAAATGATGGTCTTCCCTACCAAGAGAAGGATTTTGATACCGGGGCAAGCTTT
GAAGATCTCTGCCGAGCACATCTGGATGCTCTTTTGCGCAACATAGCTGAATCGCAAAAGCAGACAGAACTGGCAAGCAGAGTTTCAACCTGGAAGCAGAATATTGAAAAGAATCTTGAAGAGCAGGATTCTCGTCCTCCTTTTGATATCCATGTATATGGTGAAAGGGTGCTAGATGCATTCTCTTCATCTTCAAATGA
GGAGCATGAGAATAGAAGTGGAGTGCAGATGTCATTTACAGAGATAGTTGGTGGTCAAGAGAGGCATGAAGTTGCTAGAACATTTGCTGCACTTCTACAGCTGGTGAACAATGGCAATGTTGCACTTGAAAAAGGTATTTCAGGAGGTCAACCCTTCTGTTTCACTGCAGAAAAGCCATTCTTTGTAAGGCTTCTGAGTA
GTAGCAGAAGACATGAGGAAATGCTTCAATACAGAGCACCCTCGATGGCTACACCAGCAAAGAAGGCATCAAAGAAGAGTAAAAATAAGTCCCCCTTGGACCGTCAAGCAGGTATTAGAATTACAGAAAATAAGGATTCTAACAGTAAATTTTCAGATATGGATAGTTGTAGTAAATTATTAACCTCTAAGAGTAAAGAT
GTAGGGAAACAAAGGGTAGGAAGTGCTCTAAGGTCAGGGACAAATTATGAAAGCAACCATTCTGCTGATGTGGGCAGAAAAACACCTGGATCTGCATCCAGGTTTACTCCAGAAAACAAAAGGCGTCGAAGACTTCAGTCGGTTAGACCAATTGAAATTCAAGTAGAAAGATAAAGTCAGTCCACCATGGGAGACTGTTA
TTTAAGTTATTGTATGTGGGATATGATATTGGTGTTAACTTTTAATGCAATCTACTACAATCTACTGTGGGCTATTTTCAGTGTAAGCAGCTATCAAGGACTCCATTCTATGACTTTGCATTCTTCACTGCAATTGCAAGAGCACCTTCTTCATTCATCATTTAGAGGTGGTTGAGATTTTTCTGTGATTGTCTTAATTA
ATTCAACCTCGTTGTGGAGTTGTTCCAATTATGTAGGAATGCAGTAAGCCTCAATATGTCTAGATTTGGTTTGAAGAACAGATCTTGAGATGTTTGAAATCTTAAGTGCTTTGATGAATGGTCGCATCATTCACCTAATCAATTGATCAATCGATAATGGTGGCTTATTAATGATCCTTACTGCTCAATACGACAAAAAA
GGTACACTGCCACCTCTCTTTAAAATGCATTGTCTCTGTAGCAATACCGGCACAATGTTATGGGCCTTGTCTTTAATAAAATATTTAAATGTGGTGCTGATTGTTTCAGTCTTTCATTATCTAATAACATGTGTGTGTGTGGAATCACTGTGGATTGCAA
Intron 2 GTTATCATCA ... TTTGATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.07 | 17 | 6 | 1 |
| A2 | 33.33 | 8 | 7 | 1 |
| A3 | 15.38 | 22 | 7 | 1 |
| A4 | 12.73 | 24 | 2 | 5 |
| A5 | 8.11 | 17 | 0 | 3 |
| A6 | 21.05 | 15 | 1 | 7 |
| A7 | 16.98 | 22 | 5 | 4 |
| A8 | 12.5 | 14 | 3 | 1 |
| A9 | 16.92 | 27 | 7 | 4 |
| A10 | 9.09 | 15 | 1 | 2 |
>TRINITY_DN42915_c0_g1_i3 from sample A9 / Example spliced isoformGGCCAAAACCTTATCTGCATTACCGAGGAGGTTTAAAAAGCTCGCACCGGCCACGTAGGAACGAAACCCTCATTAATAAGTCTCCAGGTCGAAAAGCCTCTTGATGACATGGCGTGCCTGAATGGCATATATGGCGAGAGCGGGAAAATGCACGTTAAAATTTGACCGCAGAGTTTCTCGGGTTTTCTTCAATTATTGTA
TTTTTCCTCTGTTCTGTTCTGGCTGGGGTTCTGCTGCCTGGACGGTCTATCCATTCTGACTGAAGCTCCGCCCGCATTTTGCATATCATTTTGCTCTGGAGTCTCGGATGCTCCCACGCCAACGGCAGGTTTCCAAGTTTCCGTCTTCTAAAATTTGCAGACGGTGAAGTCCCAGAGCTACTTTAAAACGCTTTGAGGAA
AAAAACAGAAAAAACCCCAGCAAAAAACGGATGAGTGAAGAGTAGCTATGGAGGGTTTAAGATGACAGGGAAGGGTAAAGATAGAGATCAAGAGCAAGAGCCTCCTCCTTCTGAGTTGAGTTTTATTCATCTCTTGCAGCCAAACAACAGAGATTTGGCTGCAAACTGGGCCGTGGATGTAGGTCGAGAGCTCGACAACT
ACTTGGCCCAACTCTCAGTTGCTGCACTTTTCCAAGACGGGACCTCTTCTCTAAATTTTGCTCAAGCTGCTTTATTGATACAAGGATCAATACAGATATACAGCAGAAAGGTTGAATACCTGTATGCTCTTGTCCTGCAAGCTTTGGAGTTCATAGCCCAAAAAAAACAAGCTCAGCAGGAGAAGAGCTCCATCCAGGCA
GATGGAAAGGATGCTGATATTATTGAAGAGGGCGAAGAGGAATTCCTTAACTTGGATGATGTGCAAGAGGAAACAAACATCGATATTGATGATGAGGGACAAGAAGCTAGTGCATTGACTCCTGCAGTCAAACCTCCAGCTAGTTTGCTTGTTTTAGAAGGAGAAGCTGTAGACATTGGTGGAGATGGAGGAGAACTTGC
TGCTTATCAGATTGCCACTAGCAGCCTTCACAGGGATTTTCTTCTATTGGATCCTTGTGATGCTGATGCTGTCGATAAATATCTGAATGTTAATAAGGCTGCTGCTAATGGAACTCCAAATCACCTTTCTGGCTCGGCACGCCGTAGGACTCCCAGGACACCGAAAAATGGATTTTCTACACCAGGCAAAAGAGCTGGGT
CTGTCCAGAAATCTGTGCTTTCAAAGGGGCCCCAGAGTGCAATAAAGCAGCCTGAGTTTAATGAGGTGGGCTGTAGCCAGGGTGCCCATGACATCTGGGACAGGACATCTTCGGGAATATGTGAAGCACCCTTTGTACAGGATCTGGGGAATGACAAGACCAATGACTTTTGTTCATCGCATAAAGGCTTTGATGAAGGT
GGTTTTGGAGGGCAGGCTGGTGTTGAAGATGACTTTGAGGATGATGAAGATGATCCTTGGCAACCTTTGAACCCCCATGAACCTGGGGATTTACTTGTGAAACCATATAGACGAGGTGAAGCTCCAGAGGGTTATTATCAAAGAAACAAAAGGTCAGGGATGCTGATCAGGTTGCCATTGTGCTTGAATTTCCTTTGGCA
AGAAGGTTTAGCATGATTTGTCCAGAGTTTACAAAAGTGTCCAAGACTGGGGACTGTAATATTAATGGAAAATCAACCTTGCACTCACCTCCTATATATGAAAAGCTAAGGAGCTCTATGACTTTGAATCAAAGCTCTTCTTTTGATGGACCTGGGTCTCCCAGTGATGATGATCAGGGAATTGGTGTTGAACATGATTT
TGAGGACCTTGACATATTCGGTGACTATCTTGGGGAATCAAATAACAGCATTGCTGAAGCTGAAAACCCAACACTGCCTCAGGAGCACTATGATGATGGCAATCTTACTGGAAATGATGGTCTTCCCTACCAAGAGAAGGATTTTGATACCGGGGCAAGCTTTGAAGATCTCTGCCGAGCACATCTGGATGCTCTTTTGC
GCAACATAGCTGAATCGCAAAAGCAGACAGAACTGGCAAGCAGAGTTTCAACCTGGAAGCAGAATATTGAAAAGAATCTTGAAGAGCAGGATTCTCGTCCTCCTTTTGATATCCATGTATATGGTGAAAGGGTGCTAGATGCATTCTCTTCATCTTCAAATGAGGAGCATGAGAATAGAAGTGGAGTGCAGATGTCATTT
ACAGAGATAGTTGGTGGTCAAGAGAGGCATGAAGTTGCTAGAACATTTGCTGCACTTCTACAGCTGGTGAACAATGGCAATGTTGCACTTGAAAAAGGTATTTCAGGAGGTCAACCCTTCTGTTTCACTGCAGAAAAGCCATTCTTTGTAAGGCTTCTGAGTAGTAGCAGAAGACATGAGGAAATGCTTCAATACAGAGC
ACCCTCGATGGCTACACCAGCAAAGAAGGCATCAAAGAAGAGTAAAAATAAGTCCCCCTTGGACCGTCAAGCAGGTATTAGAATTACAGAAAATAAGGATTCTAACAGTAAATTTTCAGATATGGATAGTTGTAGTAAATTATTAACCTCTAAGAGTAAAGATGTAGGGAAACAAAGGGTAGGAAGTGCTCTAAGGTCAG
GGACAAATTATGAAAGCAACCATTCTGCTGATGTGGGCAGAAAAACACCTGGATCTGCATCCAGGTTTACTCCAGAAAACAAAAGGCGTCGAAGACTTCAGTCGGTTAGACCAATTGAAATTCAAGTAGAAAGATAAAGTCAGTCCACCATGGGAGACTGTTATTTAAGTTATTGTATGTGGGATATGATATTGGTGTTA
ACTTTTAATGCAATCTACTACAATCTACTGTGGGCTATTTTCAGTGTAAGCAGCTATCAAGGACTCCATTCTATGACTTTGCATTCTTCACTGCAATTGCAAGAGCACCTTCTTCATTCATCATTTAGAGGTGGTTGAGATTTTTCTGTGATTGTCTTAATTAATTCAACCTCGTTGTGGAGTTGTTCCAATTATGTAGG
AATGCAGTAAGCCTCAATATGTCTAGATTTGGTTTGAAGAACAGATCTTGAGATGTTTGAAATCTTAAGTGCTTTGATGAATGGTCGCATCATTCACCTAATCAATTGATCAATCGATAATGGTGGCTTATTAATGATCCTTACTGCTCAATACGACAAAAAAGGTACACTGCCACCTCTCTTTAAAATGCATTGTCTCT
GTAGCAATACCGGCACAATGTTATGGGCCTTGTCTTTAATAAAATATTTAAATGTGGTGCTGATTGTTTCAGTCTTTCATTATCTAATAACATGTGTGTGTGTGGAATCACTGTGGATTGCACATAGAGGTGTCTCTGATTGGTTTAATCCGGTTATTTAAGGGCTTGAATTCTTGGGCTGAAGCCATGAAGAAATAAAT
GCTAACAAATACTTTTAGGTCATGGTTTTCCCTTATAAAGTATTGAGCATGCCAGCATGCAACGCATTATTCTTTATGAGCATTGGCAGAATTGTTTTTGGTCAAAAGAGAAATTGAAAGTGTTGAAGCTAGTTTTGATAC
>TRINITY_DN42915_c0_g1_i1 from sample A9 / Example unspliced isoform:GTTATTATCAAAGAAACAAAAGGTCAGGGATGCTGATCAGGTTGCCATTGTGCTTGAATTTCCTTTGGCAAGAAGGTTTAGCATGATTTGTCCAGAGTTTACAAAAGTGTCCAAGACTGGGGACTGTAATATTAATGGAAAATCAACCTTGCACTCACCTCCTATATATGAAAAGgttatcatcatatgaccataaaatg
atgattatatttggaggagttttctttttaatgctctgatgaatgtaattctgattttggtttatttgatgcagCTAAGGAGCTCTATGACTTTGAATCAAAGCTCTTCTTTTGATGGACCTGGGTCTCCCAGTGATGATGATCAGGGAATTGGTGTTGAACATGATTTTGAGGACCTTGACATATTCGGTGACTATCTT
GGGGAATCAAATAACAGCATTGCTGAAGCTGAAAACCCAACACTGCCTCAGGAGCACTATGATGATGGCAATCTTACTGGAAATGATGGTCTTCCCTACCAAGAGAAGGATTTTGATACCGGGGCAAGCTTTGAAGATCTCTGCCGAGCACATCTGGATGCTCTTTTGCGCAACATAGCTGAATCGCAAAAGCAGACAGA
ACTGGCAAGCAGAGTTTCAACCTGGAAGCAGAATATTGAAAAGAATCTTGAAGAGCAGGATTCTCGTCCTCCTTTTGATATCCATGTATATGGTGAAAGGGTGCTAGATGCATTCTCTTCATCTTCAAATGAGGAGCATGAGAATAGAAGTGGAGTGCAGATGTCATTTACAGAGATAGTTGGTGGTCAAGAGAGGCATG
AAGTTGCTAGAACATTTGCTGCACTTCTACAGCTGGTGAACAATGGCAATGTTGCACTTGAAAAAGGTATTTCAGGAGGTCAACCCTTCTGTTTCACTGCAGAAAAGCCATTCTTTGTAAGGCTTCTGAGTAGTAGCAGAAGACATGAGGAAATGCTTCAATACAGAGCACCCTCGATGGCTACACCAGCAAAGAAGGCA
TCAAAGAAGAGTAAAAATAAGTCCCCCTTGGACCGTCAAGCAGGTATTAGAATTACAGAAAATAAGGATTCTAACAGTAAATTTTCAGATATGGATAGTTGTAGTAAATTATTAACCTCTAAGAGTAAAGATGTAGGGAAACAAAGGGTAGGAAGTGCTCTAAGGTCAGGGACAAATTATGAAAGCAACCATTCTGCTGA
TGTGGGCAGAAAAACACCTGGATCTGCATCCAGGTTTACTCCAGAAAACAAAAGGCGTCGAAGACTTCAGTCGGTTAGACCAATTGAAATTCAAGTAGAAAGATAAAGTCAGTCCACCATGGGAGACTGTTATTTAAGTTATTGTATGTGGGATATGATATTGGTGTTAACTTTTAATGCAATCTACTACAATCTACTGT
GGGCTATTTTCAGTGTAAGCAGCTATCAAGGACTCCATTCTATGACTTTGCATTCTTCACTGCAATTGCAAGAGCACCTTCTTCATTCATCATTTAGAGGTGGTTGAGATTTTTCTGTGATTGTCTTAATTAATTCAACCTCGTTGTGGAGTTGTTCCAATTATGTAGGAATGCAGTAAGCCTCAATATGTCTAGATTTG
GTTTGAAGAACAGATCTTGAGATGTTTGAAATCTTAAGTGCTTTGATGAATGGTCGCATCATTCACCTAATCAATTGATCAATCGATAATGGTGGCTTATTAATGATCCTTACTGCTCAATACGACAAAAAAGGTACACTGCCACCTCTCTTTAAAATGCATTGTCTCTGTAGCAATACCGGCACAATGTTATGGGCCTT
GTCTTTAATAAAATATTTAAATGTGGTGCTGATTGTTTCAGTCTTTCATTATCTAATAACATGTGTGTGTGTGGAATCACTGTGGATTGCACATAGAGGTGTCTCTGATTGGTTTAATCCGGTTATTTAAGGGCTTGAATTCTTGGGCTGAAGCCATGAAGAAATAAATGCTAACAAATACTTTTAGGTCATGGTTTTCC
CTTATAAAGTATTGAGCATGCCAGCATGCAACGCATTATTCTTTATGAGCATTGGCAGAATTGTTTTTGGTCAAAAGAGAAATTGAAAGTGTTGAAGCTAGTTTTGATAC
Intron 3 GTGAATTGGA ... GAACATAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 38.1 | 13 | 8 | 2 |
| A2 | 10 | 18 | 2 | 1 |
| A3 | 29.17 | 17 | 7 | 1 |
| A4 | 5 | 19 | 1 | 0 |
| A5 | 42.86 | 4 | 3 | 0 |
| A6 | 37.5 | 5 | 3 | 0 |
| A7 | 15.79 | 32 | 6 | 0 |
| A8 | 14.29 | 24 | 4 | 0 |
| A9 | 24.39 | 31 | 10 | 0 |
| A10 | 4.76 | 20 | 1 | 0 |
>TRINITY_DN124815_c0_g1_i17 from sample A1 / Example spliced isoformATGAGAACCAAGTTTTTAATTGAATATTGCTCCTTCATATCCCCCTCTTAAAACCATTTCGGCAGGTATTGCTACGCTGTAGCATTGTTTCCTTGTTTGCCCTTGTTGGCAGTTCATGAGGTCGAAACAACCATTTTTACTGATCGGCAACCTGCTGCGAAAAAGGACGATAGAAAGCAATCTCTTTCACGGTTAGGGTT
TTAAGAAAACTCTGTCATCTTCAACACTTCGTTCTTTCAATTTCAAGGTCGTTGGGTGAACGCATGACCGCCGTCACCTTACAAGGAGCAGGGGGGTTCTTTTGATGCTTCTTCCCTCCACAAGACAATGGATCGACTCCCGTGGCATCCAAAAGGCAAGAACAAAAAAAATGCAAAGGCGCCTCCAAAGTTCAAGTTCT
CCACAGTAGCCCGCAAGGAAAAACGACAAGATGAAGTGCAAGAGATCGAATCTTTGGAAGCCCGAATCGAAGCGGGCAAGCCTGACTCGGGCACAAACCCTCTTGCTTCAGAGCTTCCCGTCGTCGACACTAACAGCGTCTTGGCTCCTTATATCGGTGCGAAACTATTCGACCAGATGCCGCTCTCAGAGAAGACGAAG
AGGGGCCTCAAAGATGGTAATTTTATTCGTATGACAGCTATTCAGAGGGCTGCTCTTCCTCATGCCCTTTGTGGCAGAGACGTCCTCGGTGCCGCAAAGACCGGCTCTGGCAAAACTCTAACGTTTCTCATTCCGGTAATTGAAAAACTGTATCGATTAAGGTGGGGTTCTATGGATGGTGTTGGTGCTATTATTATCTC
TCCAACAAGAGAGCTATCGGTACAAATTTTTGATGTGCTACGGAAATTGGGAAAACACCATTCTTTTAGTGGAGGCCTTCTAATAGGTGGGAGGAAAGATGTTGAGACAGAGAAAGATTGTGTGAATGCACTCAATATCTTGGTATGCACACCAGGGCGGTTACTTCAGCATATGGATGAGACTCCCCTCTTTGACTGCT
CACAGCTTCAGGTTTTGGTACTTGATGAGGCAGATCGCATCCTGGATATGGGATTCTCAAAATCATTAAATGCAATTGTATCACAACTTCCCCGTCAACGTCAAACATTGCTTTTCTCTGCAACTCAAACACGATCAGTGCAGGATCTGGCAAGGCTTAGTTTAAAAGATCCTGAGTATCTAGCTGTGCATGCAGAGTCT
GCTGTAGCGACTCCAGCACGATTGCAACAAACTGCAATTATTGTCCCTCTTGAACAAAAACTTGATATGTTATGGAGTTTTATAAAAACTCATCTCAATGCAAAGATACTTGTATTTCTTTCAAGTTGTAAGCAGGTCAAGTTTGTTTACGAATCATTTAAGAAGCTACGTCCTGGTATACCTGTGAGATGTCTTCATGG
TCGCATGAAACAAACTCAAAGGATGCTGGTACTTTTTAACTATACAGAGGAAAAACATTCCCTTCTCTTTGCAACTGATGTAGCTTCAAGGGGCTTAGATTTTCCAGCTATTGATTGGGTGGTTCAGGTGGATTGCCCTGAAGATGTGCCATCTTACATTCATCGTGTTGGTCGCACAGCTCGTTTTAATGCTGGAGGGC
GTTCTGTTGCGTTTTTTATGCCTTCTGAAATGAAAATGCTGATGCAGCTGCAGGAGGCTAAGATTCCAGTTAAAGTGATTAAGGCAAATGCAAGTAAGCTACAGTCTGTCTCAGCTCCACTAGCAGCATTTCTGTCAAAAGATCCAGATCTGAAATATATGGCACAGCGGGCGTTTGTGACATATTTGAGGTCAATACAT
TTACGTCCGGACAAGGAAATATTTGACGTATCAAAGTTACCAATAGAAGACTTCTCTGTCTCTTTAGGTCTCCCTACAGCTCCCCGGATACGTTTCTTGAAAAGAAGTGGAAGCAAACTGAAAAAGATGGACACTTTATGTGCTGAGCAAGAACAAGAGCCTGAAGATAGCGAAAGAAGTGAGAATGAAGATGCTAGTGC
AGATGGTGCAGATAAGGACTTCTTACAAAATGTTACAAATGGAGAGTCAAAACAAGTAAAACAACGCTCCAAATTAGATCATCACTTTAACAATAAGGATTCCAGTATTCTATCTCTAGAGTATGAGAAAATGAGATCCAGGAATGATGATGAAGGGGATGATGCATTTTTGACCAAAAAGAGGCCAATTGAAGATGGAG
GCACTGAAGCCACAAGTTTGACAACAAGGATCTTGAAAAAAAAGAAACTTAAGATCAATATCAATAAGCCTGCTGGCCAGCGTTTTGTCTTTGATGAGGAAGGAAAGGCATTGCCCCCATTGGCTGCATTTGCCAACAGACAGGGTGGAGGTGACGAGGAAGACCAGACCACAGTTGAAGAAAGATACATTAAACTTAGA
GAAGAGATGAAGCATCATGATAAAGAAGATAAAGTTCTTTTGAAACAACGATTACGTGAGAAGAGGACAAAGGAGAGACAGAAGATAAAAAGACAATCCAGGGAAGATGAAAGGGATTATGAATCTGATGCATATGGATCTCAGTCTGAAGAAGGTGGAGCTGTCTACAATGATACCAAGAAATCAAAGGTGTACTTTGA
GAGTGGTAGCTCAGATGATGATGAGACTGAACTTGATCCTAGAAAGAATAAAAAGGTGAAATCGGCTAATGTTAAAACAGGCTCCATGTCTATAGCGGAGCAGGAGGCTTTAGCTCTAGAGCTTTTGAGCTCAAGGCGATAAGTTGCTGTATACGTATTGACATAGAGATTCTTTTCTTGAAAGAGCATATTTTCATGTT
TTTGGTGGGTAAGATCCAACTTGAGAGTTGTATATGTCTTTACTTTTGGCGGCAGGAATTAGCTTCACATTGTAATGCGGAATTTCTTTCATCTAATGAGAGCATAGCATGGTAACATATTATTAGTGTCTTATCAAAATGTATTGTATTTTCATTCTAAGTTCTGGTGTTGTGATCCTGATATTTCTTGGAGTTGGAGC
>TRINITY_DN124815_c0_g1_i7 from sample A1 / Example unspliced isoform:ATGAGAACCAAGTTTTTAATTGAATATTGCTCCTTCATATCCCCCTCTTAAAACCATTTCGGCAGGTATTGCTACGCTGTAGCATTGTTTCCTTGTTTGCCCTTGTTGGCAGTTCATGAGGTCGAAACAACCATTTTTACTGATCGGCAACCTGCTGCGAAAAAGGACGATAGAAAGCAATCTCTTTCACGGTTAGGGTT
TTAAGAAAACTCTGTCATCTTCAACACTTCGTTCTTTCAATTTCAAGGTCGTTGGGTGAACGCATGACCGCCGTCACCTTACAAGGAGCAGGGGGGTTCTTTTGATGCTTCTTCCCTCCACAAGACAATGGATCGACTCCCGTGGCATCCAAAAGGCAAGAACAAAAAAAATGCAAAGGCGCCTCCAAAGTTCAAGTTCT
CCACAGTAGCCCGCAAGGAAAAACGACAAGATGAAGTGCAAGAGATCGAATCTTTGGAAGCCCGAATCGAAGCGGGCAAGCCTGACTCGGGCACAAACCCTCTTGCTTCAGAGCTTCCCGTCGTCGACACTAACAGCGTCTTGGCTCCTTATATCGGTGCGAAACTATTCGACCAGATGCCGCTCTCAGAGAAGACGAAG
AGGGGCCTCAAAGATGGTAATTTTATTCGTATGACAGCTATTCAGAGGGCTGCTCTTCCTCATGCCCTTTGTGGCAGAGACGTCCTCGGTGCCGCAAAGACCGGCTCTGGCAAAACTCTAACGTTTCTCATTCCGGTAATTGAAAAACTGTATCGATTAAGGTGGGGTTCTATGGATGGTGTTGGTGCTATTATTATCTC
TCCAACAAGAGAGCTATCGGTACAAATTTTTGATGTGCTACGGAAATTGGGAAAACACCATTCTTTTAGTGGAGGCCTTCTAATAGGTGGGAGGAAAGATGTTGAGACAGAGAAAGATTGTGTGAATGCACTCAATATCTTGGTATGCACACCAGGGCGGTTACTTCAGCATATGGATGAGACTCCCCTCTTTGACTGCT
CACAGCTTCAGGTTTTGGTACTTGATGAGGCAGATCGCATCCTGGATATGGGATTCTCAAAATCATTAAATGCAATTGTATCACAACTTCCCCGTCAACGTCAAACATTGCTTTTCTCTGCAACTCAAACACGATCAGTGCAGGATCTGGCAAGGCTTAGTTTAAAAGATCCTGAGTATCTAGCTGTGCATGCAGAGTCT
GCTGTAGCGACTCCAGCACGATTGCAACAAACTGCAATTATTGTCCCTCTTGAACAAAAACTTGATATGTTATGGAGTTTTATAAAAACTCATCTCAATGCAAAGATACTTGTATTTCTTTCAAGTTGTAAGCAGGTCAAGTTTGTTTACGAATCATTTAAGAAGCTACGTCCTGGTATACCTGTGAGATGTCTTCATGG
TCGCATGAAACAAACTCAAAGGATGCTGGTACTTTTTAACTATACAGAGGAAAAACATTCCCTTCTCTTTGCAACTGATGTAGCTTCAAGGGGCTTAGATTTTCCAGCTATTGATTGGGTGGTTCAGgtgaattggaatctaaaggcagttatattcagtcatggaactatgctgaaatggaagaattcctttataatat
agtcctattttttttacaaaataattgttcttgtacactgtatgttctggcactaaacttattattttgttttggaacataaagGTGGATTGCCCTG
Intron 4 GTGGGAATCC ... TATTTTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40.91 | 13 | 2 | 9 |
| A2 | 25 | 6 | 1 | 2 |
| A3 | 23.08 | 10 | 0 | 3 |
| A4 | 36.84 | 12 | 5 | 7 |
| A5 | 18.18 | 9 | 2 | 2 |
| A6 | 31.82 | 30 | 0 | 14 |
| A7 | 21.15 | 41 | 3 | 11 |
| A8 | 27.5 | 29 | 2 | 11 |
| A9 | 33.33 | 34 | 2 | 17 |
| A10 | 28.33 | 43 | 1 | 17 |
>TRINITY_DN42915_c0_g1_i1 from sample A9 / Example spliced isoformGTTATTATCAAAGAAACAAAAGGTCAGGGATGCTGATCAGGTTGCCATTGTGCTTGAATTTCCTTTGGCAAGAAGGTTTAGCATGATTTGTCCAGAGTTTACAAAAGTGTCCAAGACTGGGGACTGTAATATTAATGGAAAATCAACCTTGCACTCACCTCCTATATATGAAAAGGTTATCATCATATGACCATAAAATG
ATGATTATATTTGGAGGAGTTTTCTTTTTAATGCTCTGATGAATGTAATTCTGATTTTGGTTTATTTGATGCAGCTAAGGAGCTCTATGACTTTGAATCAAAGCTCTTCTTTTGATGGACCTGGGTCTCCCAGTGATGATGATCAGGGAATTGGTGTTGAACATGATTTTGAGGACCTTGACATATTCGGTGACTATCTT
GGGGAATCAAATAACAGCATTGCTGAAGCTGAAAACCCAACACTGCCTCAGGAGCACTATGATGATGGCAATCTTACTGGAAATGATGGTCTTCCCTACCAAGAGAAGGATTTTGATACCGGGGCAAGCTTTGAAGATCTCTGCCGAGCACATCTGGATGCTCTTTTGCGCAACATAGCTGAATCGCAAAAGCAGACAGA
ACTGGCAAGCAGAGTTTCAACCTGGAAGCAGAATATTGAAAAGAATCTTGAAGAGCAGGATTCTCGTCCTCCTTTTGATATCCATGTATATGGTGAAAGGGTGCTAGATGCATTCTCTTCATCTTCAAATGAGGAGCATGAGAATAGAAGTGGAGTGCAGATGTCATTTACAGAGATAGTTGGTGGTCAAGAGAGGCATG
AAGTTGCTAGAACATTTGCTGCACTTCTACAGCTGGTGAACAATGGCAATGTTGCACTTGAAAAAGGTATTTCAGGAGGTCAACCCTTCTGTTTCACTGCAGAAAAGCCATTCTTTGTAAGGCTTCTGAGTAGTAGCAGAAGACATGAGGAAATGCTTCAATACAGAGCACCCTCGATGGCTACACCAGCAAAGAAGGCA
TCAAAGAAGAGTAAAAATAAGTCCCCCTTGGACCGTCAAGCAGGTATTAGAATTACAGAAAATAAGGATTCTAACAGTAAATTTTCAGATATGGATAGTTGTAGTAAATTATTAACCTCTAAGAGTAAAGATGTAGGGAAACAAAGGGTAGGAAGTGCTCTAAGGTCAGGGACAAATTATGAAAGCAACCATTCTGCTGA
TGTGGGCAGAAAAACACCTGGATCTGCATCCAGGTTTACTCCAGAAAACAAAAGGCGTCGAAGACTTCAGTCGGTTAGACCAATTGAAATTCAAGTAGAAAGATAAAGTCAGTCCACCATGGGAGACTGTTATTTAAGTTATTGTATGTGGGATATGATATTGGTGTTAACTTTTAATGCAATCTACTACAATCTACTGT
GGGCTATTTTCAGTGTAAGCAGCTATCAAGGACTCCATTCTATGACTTTGCATTCTTCACTGCAATTGCAAGAGCACCTTCTTCATTCATCATTTAGAGGTGGTTGAGATTTTTCTGTGATTGTCTTAATTAATTCAACCTCGTTGTGGAGTTGTTCCAATTATGTAGGAATGCAGTAAGCCTCAATATGTCTAGATTTG
GTTTGAAGAACAGATCTTGAGATGTTTGAAATCTTAAGTGCTTTGATGAATGGTCGCATCATTCACCTAATCAATTGATCAATCGATAATGGTGGCTTATTAATGATCCTTACTGCTCAATACGACAAAAAAGGTACACTGCCACCTCTCTTTAAAATGCATTGTCTCTGTAGCAATACCGGCACAATGTTATGGGCCTT
GTCTTTAATAAAATATTTAAATGTGGTGCTGATTGTTTCAGTCTTTCATTATCTAATAACATGTGTGTGTGTGGAATCACTGTGGATTGCACATAGAGGTGTCTCTGATTGGTTTAATCCGGTTATTTAAGGGCTTGAATTCTTGGGCTGAAGCCATGAAGAAATAAATGCTAACAAATACTTTTAGGTCATGGTTTTCC
CTTATAAAGTATTGAGCATGCCAGCATGCAACGCATTATTCTTTATGAGCATTGGCAGAATTGTTTTTGGTCAAAAGAGAAATTGAAAGTGTTGAAGCTAGTTTTGATAC
>TRINITY_DN42915_c0_g1_i7 from sample A9 / Example unspliced isoform:GTTTTAGTTGGGAATGAGTAAAATATTTGCTTAAGGATTGATTCAAGTTAAACTAGTAAGTTTTCAAGTTTACCTCATGAGTGTTGTTACTGTCATCTTCATCAAAGCAGACTTTTCTCTTGTTACATCAGTATCTTGTATTTTAATGTTATGTTCTATTTTAGCATGACCTTAGCAGTAGCACTTTCTGTTGTCCTTGA
GCTGTATGTTGGAATGAAGATACCATTTCGATTGCGGGAACGACTTTAACAGATCTCATTATGCAGGATGCTCTTTTGCGCAACATAGCTGAATCGCAAAAGCAGACAGAACTGGCAAGCAGAGTTTCAACCTGGAAGCAGAATATTGAAAAGAATCTTGAAGAGCAGgtgggaatcctttttttgattgaactttattt
tcttttattatggaaactctctaattttgagatttactttgcttttaacagtattttaaacattcatcatataggtatcgaattgtcatatcatatcagttgtacaattttggtagttaattttgttttgagatattatggtattttgtagGATTCTCGTCCTCCTTTTGATATCCATGTATATGGTGAAAGGGTGCTAG
ATGCATTCTCTTCATCTTCAAATGAGGAGCATGAGAATAGAAGTGGAGTGCAGATGTCATTTACAGAGATAGTTGGTGGTCAAGAGAGGCATGAAGTTGCTAGAACATTTGCTGCACTTCTACAGCTGGTGAACAATGGCAATGTTGCACTTGAAAAAGGTATTTCAGGAGGTCAACCCTTCTGTTTCACTGCAGAAAAG
CCATTCTTTGTAAGGCTTCTGAGTAGTAGCAGAAGACATGAGGAAATGCTTCAATACAGAGCACCCTCGATGGCTACACCAGCAAAGAAGGCATCAAAGAAGAGTAAAAATAAGTCCCCCTTGGACCGTCAAGCAGGTATTAGAATTACAGAAAATAAGGATTCTAACAGTAAATTTTCAGATATGGATAGTTGTAGTAA
ATTATTAACCTCTAAGAGTAAAGATGTAGGGAAACAAAGGGTAGGAAGTGCTCTAAGGTCAGGGACAAATTATGAAAGCAACCATTCTGCTGATGTGGGCAGAAAAACACCTGGATCTGCATCCAGGTTTACTCCAGAAAACAAAAGGCGTCGAAGACTTCAGTCGGTTAGACCAATTGAAATTCAAGTAGAAAGATAAA
GTCAGTCCACCATGGGAGACTGTTATTTAAGTTATTGTATGTGGGATATGATATTGGTGTTAACTTTTAATGCAATCTACTACAATCTACTGTGGGCTATTTTCAGTGTAAGCAGCTATCAAGGACTCCATTCTATGACTTTGCATTCTTCACTGCAATTGCAAGAGCACCTTCTTCATTCATCATTTAGAGGTGGTTGA
GATTTTTCTGTGATTGTCTTAATTAATTCAACCTCGTTGTGGAGTTGTTCCAATTATGTAGGAATGCAGTAAGCCTCAATATGTCTAGATTTGGTTTGAAGAACAGATCTTGAGATGTTTGAAATCTTAAGTGCTTTGATGAATGGTCGCATCATTCACCTAATCAATTGATCAATCGATAATGGTGGCTTATTAATGAT
CCTTACTGCTCAATACGACAAAAAAGGTACACTGCCACCTCTCTTTAAAATGCATTGTCTCTGTAGCAATACCGGCACAATGTTATGGGCCTTGTCTTTAATAAAATATTTAAATGTGGTGCTGATTGTTTCAGTCTTTCATTATCTAATAACATGTGTGTGTGTGGAATCACTGTGGATTGCACATAGAGGTGTCTCTG
ATTGGTTTAATCCGGTTATTTAAGGGCTTGAATTCTTGGGCTGAAGCCATGAAGAAATAAATGCTAACAAATACTTTTAGGTCATGGTTTTCCCTTATAAAGTATTGAGCATGCCAGCATGCAACGCATTATTCTTTATGAGCATTGGCAGAATTGTTTTTGGTCAAAAGAGAAATTGAAAGTGTTGAAGCTAGTTTTGA
TAC
Intron 5 GTGTGCTTTT ... GACCACATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 31.34 | 23 | 7 | 14 |
| A2 | 16.05 | 34 | 8 | 5 |
| A3 | 24.32 | 42 | 4 | 23 |
| A4 | 23.08 | 35 | 3 | 18 |
| A5 | 31.25 | 11 | 3 | 7 |
| A6 | 19.3 | 23 | 0 | 11 |
| A7 | 22.22 | 42 | 10 | 14 |
| A8 | 16.28 | 36 | 8 | 6 |
| A9 | 15.2 | 53 | 7 | 12 |
| A10 | 14.56 | 44 | 2 | 13 |
>TRINITY_DN124815_c0_g1_i17 from sample A1 / Example spliced isoformATGAGAACCAAGTTTTTAATTGAATATTGCTCCTTCATATCCCCCTCTTAAAACCATTTCGGCAGGTATTGCTACGCTGTAGCATTGTTTCCTTGTTTGCCCTTGTTGGCAGTTCATGAGGTCGAAACAACCATTTTTACTGATCGGCAACCTGCTGCGAAAAAGGACGATAGAAAGCAATCTCTTTCACGGTTAGGGTT
TTAAGAAAACTCTGTCATCTTCAACACTTCGTTCTTTCAATTTCAAGGTCGTTGGGTGAACGCATGACCGCCGTCACCTTACAAGGAGCAGGGGGGTTCTTTTGATGCTTCTTCCCTCCACAAGACAATGGATCGACTCCCGTGGCATCCAAAAGGCAAGAACAAAAAAAATGCAAAGGCGCCTCCAAAGTTCAAGTTCT
CCACAGTAGCCCGCAAGGAAAAACGACAAGATGAAGTGCAAGAGATCGAATCTTTGGAAGCCCGAATCGAAGCGGGCAAGCCTGACTCGGGCACAAACCCTCTTGCTTCAGAGCTTCCCGTCGTCGACACTAACAGCGTCTTGGCTCCTTATATCGGTGCGAAACTATTCGACCAGATGCCGCTCTCAGAGAAGACGAAG
AGGGGCCTCAAAGATGGTAATTTTATTCGTATGACAGCTATTCAGAGGGCTGCTCTTCCTCATGCCCTTTGTGGCAGAGACGTCCTCGGTGCCGCAAAGACCGGCTCTGGCAAAACTCTAACGTTTCTCATTCCGGTAATTGAAAAACTGTATCGATTAAGGTGGGGTTCTATGGATGGTGTTGGTGCTATTATTATCTC
TCCAACAAGAGAGCTATCGGTACAAATTTTTGATGTGCTACGGAAATTGGGAAAACACCATTCTTTTAGTGGAGGCCTTCTAATAGGTGGGAGGAAAGATGTTGAGACAGAGAAAGATTGTGTGAATGCACTCAATATCTTGGTATGCACACCAGGGCGGTTACTTCAGCATATGGATGAGACTCCCCTCTTTGACTGCT
CACAGCTTCAGGTTTTGGTACTTGATGAGGCAGATCGCATCCTGGATATGGGATTCTCAAAATCATTAAATGCAATTGTATCACAACTTCCCCGTCAACGTCAAACATTGCTTTTCTCTGCAACTCAAACACGATCAGTGCAGGATCTGGCAAGGCTTAGTTTAAAAGATCCTGAGTATCTAGCTGTGCATGCAGAGTCT
GCTGTAGCGACTCCAGCACGATTGCAACAAACTGCAATTATTGTCCCTCTTGAACAAAAACTTGATATGTTATGGAGTTTTATAAAAACTCATCTCAATGCAAAGATACTTGTATTTCTTTCAAGTTGTAAGCAGGTCAAGTTTGTTTACGAATCATTTAAGAAGCTACGTCCTGGTATACCTGTGAGATGTCTTCATGG
TCGCATGAAACAAACTCAAAGGATGCTGGTACTTTTTAACTATACAGAGGAAAAACATTCCCTTCTCTTTGCAACTGATGTAGCTTCAAGGGGCTTAGATTTTCCAGCTATTGATTGGGTGGTTCAGGTGGATTGCCCTGAAGATGTGCCATCTTACATTCATCGTGTTGGTCGCACAGCTCGTTTTAATGCTGGAGGGC
GTTCTGTTGCGTTTTTTATGCCTTCTGAAATGAAAATGCTGATGCAGCTGCAGGAGGCTAAGATTCCAGTTAAAGTGATTAAGGCAAATGCAAGTAAGCTACAGTCTGTCTCAGCTCCACTAGCAGCATTTCTGTCAAAAGATCCAGATCTGAAATATATGGCACAGCGGGCGTTTGTGACATATTTGAGGTCAATACAT
TTACGTCCGGACAAGGAAATATTTGACGTATCAAAGTTACCAATAGAAGACTTCTCTGTCTCTTTAGGTCTCCCTACAGCTCCCCGGATACGTTTCTTGAAAAGAAGTGGAAGCAAACTGAAAAAGATGGACACTTTATGTGCTGAGCAAGAACAAGAGCCTGAAGATAGCGAAAGAAGTGAGAATGAAGATGCTAGTGC
AGATGGTGCAGATAAGGACTTCTTACAAAATGTTACAAATGGAGAGTCAAAACAAGTAAAACAACGCTCCAAATTAGATCATCACTTTAACAATAAGGATTCCAGTATTCTATCTCTAGAGTATGAGAAAATGAGATCCAGGAATGATGATGAAGGGGATGATGCATTTTTGACCAAAAAGAGGCCAATTGAAGATGGAG
GCACTGAAGCCACAAGTTTGACAACAAGGATCTTGAAAAAAAAGAAACTTAAGATCAATATCAATAAGCCTGCTGGCCAGCGTTTTGTCTTTGATGAGGAAGGAAAGGCATTGCCCCCATTGGCTGCATTTGCCAACAGACAGGGTGGAGGTGACGAGGAAGACCAGACCACAGTTGAAGAAAGATACATTAAACTTAGA
GAAGAGATGAAGCATCATGATAAAGAAGATAAAGTTCTTTTGAAACAACGATTACGTGAGAAGAGGACAAAGGAGAGACAGAAGATAAAAAGACAATCCAGGGAAGATGAAAGGGATTATGAATCTGATGCATATGGATCTCAGTCTGAAGAAGGTGGAGCTGTCTACAATGATACCAAGAAATCAAAGGTGTACTTTGA
GAGTGGTAGCTCAGATGATGATGAGACTGAACTTGATCCTAGAAAGAATAAAAAGGTGAAATCGGCTAATGTTAAAACAGGCTCCATGTCTATAGCGGAGCAGGAGGCTTTAGCTCTAGAGCTTTTGAGCTCAAGGCGATAAGTTGCTGTATACGTATTGACATAGAGATTCTTTTCTTGAAAGAGCATATTTTCATGTT
TTTGGTGGGTAAGATCCAACTTGAGAGTTGTATATGTCTTTACTTTTGGCGGCAGGAATTAGCTTCACATTGTAATGCGGAATTTCTTTCATCTAATGAGAGCATAGCATGGTAACATATTATTAGTGTCTTATCAAAATGTATTGTATTTTCATTCTAAGTTCTGGTGTTGTGATCCTGATATTTCTTGGAGTTGGAGC
>TRINITY_DN124815_c0_g1_i13 from sample A1 / Example unspliced isoform:ATGAGAACCAAGTTTTTAATTGAATATTGCTCCTTCATATCCCCCTCTTAAAACCATTTCGGCAGGTATTGCTACGCTGTAGCATTGTTTCCTTGTTTGCCCTTGTTGGCAGTTCATGAGGTCGAAACAACCATTTTTACTGATCGGCAACCTGCTGCGAAAAAGGACGATAGAAAGCAATCTCTTTCACGGTTAGGGTT
TTAAGAAAACTCTGTCATCTTCAACACTTCGTTCTTTCAATTTCAAGGTCGTTGGGTGAACGCATGACCGCCGTCACCTTACAAGGAGCAGGGGGGTTCTTTTGATGCTTCTTCCCTCCACAAGACAATGGATCGACTCCCGTGGCATCCAAAAGGCAAGAACAAAAAAAATGCAAAGGCGCCTCCAAAGTTCAAGTTCT
CCACAGTAGCCCGCAAGGAAAAACGACAAGATGAAGTGCAAGAGATCGAATCTTTGGAAGCCCGAATCGAAGCGGGCAAGCCTGACTCGGGCACAAACCCTCTTGCTTCAGAGCTTCCCGTCGTCGACACTAACAGCGTCTTGGCTCCTTATATCGGTGCGAAACTATTCGACCAGATGCCGCTCTCAGAGAAGACGAAG
AGGGGCCTCAAAGATGGTAATTTTATTCGTATGACAGCTATTCAGAGGGCTGCTCTTCCTCATGCCCTTTGTGGCAGAGACGTCCTCGGTGCCGCAAAGACCGGCTCTGGCAAAACTCTAACGTTTCTCATTCCGGTAATTGAAAAACTGTATCGATTAAGGTGGGGTTCTATGGATGGTGTTGGTGCTATTATTATCTC
TCCAACAAGAGAGCTATCGGTACAAATTTTTGATGTGCTACGGAAATTGGGAAAACACCATTCTTTTAGTGGAGGCCTTCTAATAGGTGGGAGGAAAGATGTTGAGACAGAGAAAGATTGTGTGAATGCACTCAATATCTTGGTATGCACACCAGGGCGGTTACTTCAGCATATGGATGAGACTCCCCTCTTTGACTGCT
CACAGCTTCAGGTTTTGGTACTTGATGAGGCAGATCGCATCCTGGATATGGGATTCTCAAAATCATTAAATGCAATTGTATCACAACTTCCCCGTCAACGTCAAACATTGCTTTTCTCTGCAACTCAAACACGATCAGTGCAGGATCTGGCAAGGCTTAGTTTAAAAGATCCTGAGTATCTAGCTGTGCATGCAGAGTCT
GCTGTAGCGACTCCAGCACGATTGCAACAAACTGCAATTATTGTCCCTCTTGAACAAAAACTTGATATGTTATGGAGTTTTATAAAAACTCATCTCAATGCAAAGATACTTGTATTTCTTTCAAGTTGTAAGCAGGTCAAGTTTGTTTACGAATCATTTAAGAAGCTACGTCCTGGTATACCTGTGAGATGTCTTCATGG
TCGCATGAAACAAACTCAAAGGATGCTGGTACTTTTTAACTATACAGAGGAAAAACATTCCCTTCTCTTTGCAACTGATGTAGCTTCAAGGGGCTTAGATTTTCCAGCTATTGATTGGGTGGTTCAGGTGGATTGCCCTGAAGATGTGCCATCTTACATTCATCGTGTTGGTCGCACAGCTCGTTTTAATGCTGGAGGGC
GTTCTGTTGCGTTTTTTATGCCTTCTGAAATGAAAATGCTGATGCAGCTGCAGGAGGCTAAGATTCCAGTTAAAGTGATTAAGgtgtgcttttattgtgagagtggagaaccctctttgatagtattgatggccatttattatattttgggttttagtcttttttaaagcatcaattataatccatcatgttgaaaagaa
tgtgtctttcaatatttcttgggtgaccacatagGCAAATGCAAGTAAGCTACAGTCTGTCTCAGCTCCACTAGCAGCATTTCTGTCAAAAGATCCAGATCTGAAATATATGGCACAGCGGGCGTTTGTGACATATTTGAGGTCAATACATTTACGTCCGGACAAGGAAATATTTGACGTATCAAAGTTACCAATAGAAG
ACTTCTCTGTCTCTTTAGGTCTCCCTACAGCTCCCCGGATACGTTTCTTGAAAAGAAGTGGAAGCAAACTGAAAAAGATGGACACTTTATGTGCTGAGCAAGAACAAGAGCCTGAAGATAGCGAAAGAAGTGAGAATGAAGATGCTAGTGCAGATGGTGCAGATAAGGACTTCTTACAAAATGTTACAAATGGAGAGTCA
AAACAAGTAAAACAACGCTCCAAATTAGATCATCACTTTAACAATAAGGATTCCAGTATTCTATCTCTAGAGTATGAGAAAATGAGATCCAGGAATGATGATGAAGGGGATGATGCATTTTTGACCAAAAAGAGGCCAATTGAAGATGGAGGCACTGAAGCCACAAGTTTGACAACAAGGATCTTGAAAAAAAAGAAACT
TAAGATCAATATCAATAAGCCTGCTGGCCAGCGTTTTGTCTTTGATGAGGAAGGAAAGGCATTGCCCCCATTGGCTGCATTTGCCAACAGACAGGGTGGAGGTGACGAGGAAGACCAGACCACAGTTGAAGAAAGATACATTAAACTTAGAGAAGAGATGAAGCATCATGATAAAGAAGATAAAGTTCTTTTGAAACAAC
GATTACGTGAGAAGAGGACAAAGGAGAGACAGAAGATAAAAAGACAATCCAGGGAAGATGAAAGGGATTATGAATCTGATGCATATGGATCTCAGTCTGAAGAAGGTGGAGCTGTCTACAATGATACCAAGAAATCAAAGGTGTACTTTGAGAGTGGTAGCTCAGATGATGATGAGACTGAACTTGATCCTAGAAAGAAT
AAAAAGGTGAAATCGGCTAATGTTAAAACAGGCTCCATGTCTATAGCGGAGCAGGAGGCTTTAGCTCTAGAGCTTTTGAGCTCAAGGCGATAAGTTGCTGTATACGTATTGACATAGAGATTCTTTTCTTGAAAGAGCATATTTTCATGTTTTTGGTGGGTAAGATCCAACTTGAGAGTTGTATATGTCTTTACTTTTGG
CGGCAGGAATTAGCTTCACATTGTAATGCGGAATTTCTTTCATCTAATGAGAGCATAGCATGGTAACATATTATTAGTGTCTTATCAAAATGTATTGTATTTTCATTCTAAGTTCTGGTGTTGTGATCCTGATATTTCTTGGAGTTGGAGC