sp|Q9LJG8|ASIL2_ARATH ----> Trihelix transcription factor ASIL2
Intron 1 GTGAGAATGG ... TTATTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 0 | 8 |
| A2 | 42.86 | 2 | 0 | 3 |
| A3 | 60 | 5 | 9 | 6 |
| A4 | 42.86 | 2 | 3 | 0 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 92.45 | 2 | 22 | 27 |
| A7 | 74.47 | 6 | 19 | 16 |
| A8 | 78.82 | 9 | 26 | 41 |
| A9 | 62.79 | 16 | 21 | 33 |
| A10 | 50 | 2 | 1 | 3 |
>TRINITY_DN41573_c1_g1_i4 from sample A8 / Example spliced isoformCCAAAACAAATCCCTACCTTTCCCCATCTCCCTCTACCAAAGTTGGGAAATCTTAACCCTAGCGGTTTCTTCTAACCGCAGTTATTCACTTCAATTAAACCCTCGATAACAAGCTCCCATTCTTCATTGGTTTTAACATACGTGCCCGCATCAGAATCCGCTCGGTACCTTTGAAGGAACCCGACCCTTAATCGATCCCT
CTTTGTTTCTATTCTGCTGCCAGATTCTCAATGTTCTCAGGGAATTTATGCTTTGGATAGCAGAGAAAATGCAGGAAAATGCATTTCCTGGCTGCCGCTTTCCATGCTTAGGAGTTAGGATGAAAACCAACTTTTGGGTTGGGAGAATTCTTAGGAGTTGAGCATAGTTGAGTGCCTATTCTTGAAGGATAATCTTGATT
CAATGGAGAAGCAGCAGATAGGAAACCAGCAGCAGCAGCAGCAGCAGCAGCACCATCAGCATCAACAGCAGCAGCAGCAGCAGCATCAACAGCAGCCGCCGCCGCCGCCGTTGCTACGTGTTCAAGTCCCACAACAACAGGCCCAACATCAACAATTACAGCAGCCATATATGAAGACAGGCGAAAATGGTGTCTCCAAG
ACTCCTGATCGGACCAAAAGAGATGAATGGAGCGAAGAAGCGGTCTGTACTCTTCTGGATGCTTATGAGTCGAAATGGCTTCTCAGAAATCGGGCCAAGCTCAAAGGAAATGATTGGGAGGATGTGGCAAAGCAGGTTTCTACTCGCAGTTCTGGAGTTAAATCGCACAAGACACAGTCACAATGCAAAAACAAGATTGA
GTCTATGAAGAAGAGATATAGGTCTGAGGCGGCGAGTATATGCAATCCTGGTTCTGGACCTTCTTCCTGGCCCTTCTTTGCAAGGATGGATGGGTTGTTAAGATGCACGACTGTGCCCCAAGCCAGGCCTGGTGGTGTGTGTGTTGATACGGGTGGACAGCCTGCACTCACCGATCTGGGAATGCAAGCCTTGCCCAAGG
TGGAAATTGGAGATTCAGAGATGGTCTTCAAAAGGGTACAAGAGATCCATCCTAATCCAGGAGAATTCATTGAAGGAAATCTAAACCATTTGGCAGTAGTGGAAGCAGAGGGACAGATGCAGGACAGCAACCAGGAAGATGGTTCTAACACGTTGCCAAATAGGAAAGAGAGCGCAGCGTTGGACAGCGACACCAGTACT
CCTCGGAGCAAAGTGGCAAATGTGGGAGAGGGCTCAGGAAAAGGCCATTCATCAAAACGCAGGAAGAATTCAAGCAGTGAAGTAGCAGAGAGCATTCGATCTTTTGCTGATTCAATCCTCAAGCTTGAGCAGGCAAAGATGGAGATGTACAAGGACTCAGAACGCTTGAGGGCAGAGACAGAGGTTAGGAGAGGCGAGAT
GGAACTCAAGCGCACAGAGATCATAGCCAAAACTCAATTACAGATAGCTAGATTGTTGTCTGGGAAAAGGGGTAAACGAAAGCTTGCTAATAAAAATTCTGCGTTGAAATCTGCACTTGCCGCAACAACAGCAGCTCCATCAGATGGTCCTGCTCCAGCCATGCAGGAGTGAGAAGAATAAGGTACTTCCAGAAACATGC
CTTGAAGTTGGGGCTGCACTGCATAACATGGACGTCTTTCAGCTTAGATGCTAGGTCTGAGGGTTATTTATTCTGACAAATTCACTCGGGACTTCTACCCAGTCTCATACCTTTATTGACATACCATTCAGGGGGAACATAACACGGAACCAGAAGCATTGTATCAGTCTCAACTATTATACATCATTAATTGCAAATGT
TCGTGATTGTTATGCGCACAAGACATGAAAATGAGAACATGCAAGATGGACAAGCTTCTCACTGCTGCAAGGTAACTAGTTATTCTCCATGGCATTGTGGTATACAAGATATTGTTTTATAACTTGCCATTGCCATCTTGCAAAACTATGGTCCACAACTGTTATTTCAATCAGTGGTAACTTTTACCATTTCATTTAAA
ATGGTTACTAAAATGCAGACATATACTCATTCTGTTTTTTCCTTGGTATATCTGATCTAGAGCTTGCCCTCTTATTTGGAAAAAGTAATTTATGTGCTATTTTTTTGTCACTCTAAATCAAAGACTAATAATGGCTAAGAATGCCACCTTTTGAATCTCTGAATCCCTAAAATTAGTGACACGAGAGCAACAAGCAAAAG
GTGCTTGTGCATATATCCTCTCTTTGATAAGCCATTTAATGCACG
>TRINITY_DN41573_c1_g1_i2 from sample A8 / Example unspliced isoform:CCAAAACAAATCCCTACCTTTCCCCATCTCCCTCTACCAAAGTTGGGAAATCTTAACCCTAGCGGTTTCTTCTAACCGCAGTTATTCACTTCAATTAAACCCTCGATAACAAGCTCCCATTCTTCATTGGTTTTAACATACGTGCCCGCATCAGAATCCGCTCGGTACCTTTGAAGGAACCCGACCCTTAATCGATCCCT
CTTTGTTTCTATTCTGCTGCCAGATTCTCAATGTTCTCAGGGAATTTATGCTTTGGATAGCAGAGAAAATGCAGGAAAATGCATTTCCTGGCTGCCGCTTTCCATGCTTAGGAGTTAGGATGAAAACCAACTTTTGGGTTGGGAGAATTCTTAGGAGTTGAGCATAGTTGAGTGCCTATTCTTGAAGGATAATCTTGATT
CAATGGAGAAGCAGCAGATAGGAAACCAGCAGCAGCAGCAGCAGCAGCAGCACCATCAGCATCAACAGCAGCAGCAGCAGCAGCATCAACAGCAGCCGCCGCCGCCGCCGTTGCTACGTGTTCAAGTCCCACAACAACAGGCCCAACATCAACAATTACAGCAGCCATATATGAAGACAGGCGAAAATGGTGTCTCCAAG
ACTCCTGATCGGACCAAAAGAGATGAATGGAGCGAAGAAGCGGTCTGTACTCTTCTGGATGCTTATGAGTCGAAATGGCTTCTCAGAAATCGGGCCAAGCTCAAAGGAAATGATTGGGAGGATGTGGCAAAGCAGGTTTCTACTCGCAGTTCTGGAGTTAAATCGCACAAGACACAGTCACAATGCAAAAACAAGATTGA
GTCTATGAAGAAGAGATATAGGTCTGAGGCGGCGAGTATATGCAATCCTGGTTCTGGACCTTCTTCCTGGCCCTTCTTTGCAAGGATGGATGGGTTGTTAAGATGCACGACTGTGCCCCAAGCCAGGCCTGGTGGTGTGTGTGTTGATACGGGTGGACAGCCTGCACTCACCGATCTGGGAATGCAAGCCTTGCCCAAGG
TGGAAATTGGAGATTCAGAGATGGTCTTCAAAAGGGTACAAGAGATCCATCCTAATCCAGGAGAATTCATTGAAGGAAATCTAAACCATTTGGCAGTAGTGGAAGCAGAGGGACAGATGCAGGACAGCAACCAGGAAGATGGTTCTAACACGTTGCCAAATAGGAAAGAGAGCGCAGCGTTGGACAGCGACACCAGTACT
CCTCGGAGCAAAGTGGCAAATGTGGGAGAGGGCTCAGGAAAAGGCCATTCATCAAAACGCAGGAAGAATTCAAGCAGTGAAGTAGCAGAGAGCATTCGATCTTTTGCTGATTCAATCCTCAAGCTTGAGCAGGCAAAGATGGAGATGTACAAGGACTCAGAACGCTTGAGGGCAGAGACAGAGGTTAGGAGAGGCGAGAT
GGAACTCAAGCGCACAGAGATCATAGCCAAAACTCAATTACAGATAGCTAGATTGTTGTCTGGGAAAAGGGGTAAACGAAAGCTTGCTAATAAAAATTCTGCGTTGAAATCTGCACTTGCCGCAACAACAGCAGCTCCATCAGATGGTCCTGCTCCAGCCATGCAGGAGTGAGAAGAATAAGGTACTTCCAGAAACATGC
CTTGAAGTTGGGGCTGCACTGCATAACATGGACGTCTTTCAGCTTAGATGCTAGGTCTGAGGGTTATTTATTCTGACAAATTCACTCGGGACTTCTACCCAGTCTCATACCTTTATTGACATACCATTCAGGGGGAACATAACACGgtgagaatgggtctcagctgtattacttagtactgcatcaatcccactgccact
ggaaaatgaaggccccgttggcatatatattgttgcataattaaatcaatagatatgggccaaattatttgcagGAACCAGAAGCATTGTATCAGTCTCAACTATTATACATCATTAATTGCAAATGTTCGTGATTGTTATGCGCACAAGACATGAAAATGAGAACATGCAAGATGGACAAGCTTCTCACTGCTGCAAGG
TAACTAGTTATTCTCCATGGCATTGTGGTATACAAGATATTGTTTTATAACTTGCCATTGCCATCTTGCAAAACTATGGTCCACAACTGTTATTTCAATCAGTGGTAACTTTTACCATTTCATTTAAAATGGTTACTAAAATGCAGACATATACTCATTCTGTTTTTTCCTTGGTATATCTGATCTAGAGCTTGCCCTCT
TATTTGGAAAAAGTAATTTATGTGCTATTTTTTTGTCACTCTAAATCAAAGACTAATAATGGCTAAGAATGCCACCTTTTGAATCTCTGAATCCCTAAAATTAGTGACACGAGAGCAACAAGCAAAAGGTGCTTGTGCATATATCCTCTCTTTGATAAGCCATTTAATGCACG
Intron 2 GTAAAGATAC ... GATATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.97 | 35 | 14 | 31 |
| A2 | 49.33 | 38 | 1 | 37 |
| A3 | 47.46 | 31 | 9 | 28 |
| A4 | 60 | 20 | 5 | 30 |
| A5 | 65.79 | 13 | 1 | 25 |
| A6 | 46.88 | 17 | 0 | 15 |
| A7 | 54.55 | 25 | 3 | 30 |
| A8 | 57.69 | 11 | 2 | 15 |
| A9 | 45.83 | 65 | 12 | 55 |
| A10 | 48.28 | 45 | 6 | 42 |
>TRINITY_DN43657_c0_g1_i3 from sample A7 / Example spliced isoformGCCAGGTATGTTCTTCTCCATTTATTCGGCTTGTCTGCGAATTGTTTGACAAAATTTATCAATGGATTATAGCAGTAGCCACTGGCCAAATTCTATTATATCTTTTCCATGCCTGGTAAACCCCCCTATGGATCATCGTTACACACCTGTATTTTTCAAGTATTTGACATCTGTGAGCACGGTTTGTCAAAGTTCCTCTT
ATGATTCTCAATGTTCTCAGGGAATTTATGCTTTGGATAGCAGAGAAAATGCAGGAAAATGCATTTCCTGGCTGCCGCTTTCCATGCTTAGGAGTTAGGATGAAAACCAACTTTTGGGTTGGGAGAATTCTTAGGAGTTGAGCATAGTTGAGTGCCTATTCTTGAAGGATAATCTTGATTCAATGGAGAAGCAGCAGATA
GGAAACCAGCAGCAGCAGCAGCAGCAGCAGCACCATCAGCATCAACAGCAGCAGCAGCAGCAGCAGCATCAACAGCAGCCGCCGCCGCCGCCGTTGCTACGTGTTCAAGTCCCACAACAACAGGCCCAACATCAACAATTACAGCAGCCATATATGAAGACAGGCGAAAATGGTGTCTCCAAGACTCCTGATCGGACCAA
AAGAGATGAATGGAGCGAAGAAGCGGTCTGTACTCTTCTGGATGCTTATGAGTCGAAATGGCTTCTCAGAAATCGGGCCAAGCTCAAAGGAAATGATTGGGAGGATGTGGCAAAGCAGGTTTCTACTCGCAGTTCTGGAGTTAAATCGCACAAGACACAGTCACAATGCAAAAACAAGATTGAGTCTATGAAGAAGAGAT
ATAGGTCTGAGGCGGCGAGTATATGCAATCCTGGTTCTGGACCTTCTTCCTGGCCCTTCTTTGCAAGGATGGATGGGTTGTTAAGATGCACGACTGTGCCCCAAGCCAGGCCTGGTGGTGTGTGTGTTGATACGGGTGGACAGCCTGCACTCACCGATCTGGGAATGCAAGCCTTGCCCAAGGTGGAAATTGGAGATTCA
GAGATGGTCTTCAAAAGGGTACAAGAGATCCATCCTAATCCAGGAGAATTCATTGAAGGAAATCTAAACCATTTGGCAGTAGTGGAAGCAGAGGGACAGATGCAGGACAGCAACCAGGAAGATGGTTCTAACACGTTGCCAAATAGGAAAGAGAGCGCAGCGTTGGACAGCGACACCAGTACTCCTCGGAGCAAAGTGGC
AAATGTGGGAGAGGGCTCAGGAAAAGGCCATTCATCAAAACGCAGGAAGAATTCAAGCAGTGAAGTAGCGGAGAGCATTCGATCTTTTGCTGATTCAATCCTCAAGCTTGAGCAGGCAAAGATGGAGATGTACAAGGACTCAGAACGCTTGAGGGCAGAGACAGAGGTTAGGAGAGGCGAGATGGAACTCAAGCGCACAG
AGATCATAGCCAAAACTCAATTACAGATAGCTAGATTGTTGTCTGGGAAAAGGGGTAAACGAAAGCTTGCTAATAAAAATTCTGCGTTGAAATCTGCACTTGCCGCAACAACAGCAGCTCCATCAGATGGTCCTGCTCCAGCCATGCAGGAGTGAGAAGAATAAGGTCAAAGGACGTCGATATTCGTTCACTCAATGAAA
GTAGAGCTGATCTTTCACTACAAGGCCCGAGTTTCTGTGCTATTGTACAGAAATTCTGAGACTCTCATGGATAGCTGTGTTTCTTCTTTACTTTTAAGGAACACATAGATTGTTCCTCATTCTATTTACACCTCTACATGAATGTGATATTGTACCATACCAAAGTATGGACTGCAAGCTCTGGTTTGATGGCCAAAAGT
AAAGAGGCAATATTATAGTATCCTATGGTTACTGGCTTGCAGTTGCTGTTGTACAGTAGTATCTGTTTCCAAGAATGGCAGGGTTTCGTGTGTTACTTCTACTATCATAAGTTCCTGTGTATTGAAAATCCATAGTACATACTGAACAGATCAAAAGTTTGATCTACTGAATTGAATACAATTTTAAGAGATCCGACTGG
AGAAATTAATAATTTTTAAAATTAGTAGTTGCATGCCATATGGTTTTAGCATGTGCACTGAATTTGAAACTTTTTCTGGATGTTCAAGTTTTTCATGAATCTTGAATCTTGTTTGTTCCAATGCAAATATTTATCAAACGTAGAGTTTTTATAGCTATGATAGCCTAGGTATAGTAAGATTCACTCTGTCATCTTAACAT
TAAGCTGACATAGAATGAAAAAAATGTCAATAATCCAAATTCGATTGAGCCGGTTACAATTCACATAGTTTGATTCTCGGCTTATGGGCAGGTTGATCTCAAAATAGCACTTTATATGATATATGCTTCACTTTAGTGGGGTTGACAATGAATTGATATTTCGAGTAAACAGTGACTTCCTTTTTCACCAGGCTTGATTA
ATAATGTAATTTTCAGCCAAATTTAAGGGTAGTTCTTTTATCCTTTTCTGGGAAGTTGCTTCGAGAAATACACCCCGTGGTTGGGTGCTGCACGGCATAACATGGACTTAGGTGCAAGGTGTAAGGGGTATCAATTGTGCCAAAGTCGCCTGGGGTTGACCGTAGTGAGAGCAGAACTCAGGTGGACAGCTTAATAATCC
TTGTCGGCCTTATCAGCATGATAGTCTGTCAACCTCACTATTGAACCAAGGGCCCATGGCAAGGTAGGCTTGTTAGACCTTGTAGTTATTAATTACTTACTCCAGC
>TRINITY_DN43657_c0_g1_i2 from sample A7 / Example unspliced isoform:GCCAGGTATGTTCTTCTCCATTTATTCGGCTTGTCTGCGAATTGTTTGACAAAATTTATCAATGGATTATAGCAGTAGCCACTGGCCAAATTCTATTATATCTTTTCCATGCCTGGTAAACCCCCCTATGGATCATCGTTACACACCTGTATTTTTCAAGTATTTGACATCTGTGAGCACGGTTTGTCAAAGTTCCTCTT
ATGgtaaagatacccactagctgttttatttaaaaaagttcatatattcggtttcccaactagctgattgtcaaaattcttgcagattagccatacatttttattgaatttgtcttactttttgcacatatcgacttatcttgaatccccctgtattttaggtatttactcctaaatttgagtaaattgacttttatctg
tcagctatttgtttgtcagaaggcctctggtttttgctatataatttaatttggttactgagggttctatattcgccttcacggtttagttccaaattttgggcgatattcattgaagtgataaatagtcccacccatctttttaactaaaatttagccatttttttatatgcccatccacattttggtcacagatttgt
ctttccatgaacactttagcataaaattagctgcccatcttaatgtagatgccttgtacactttagtgatatatttggctctactccctgtgtttgtctgaatcttctgatattcattcactctcttattgcacgaccatatatgcgattatctgctttgtgtcattttgtattttgcctctagtttagtcgtgtgttct
gtctgtctgccaaagttcgttagatcttcaatcagtgcaccagtattaggtttatagctttgtcattgatctgttcttcaaggtgtttctatttgtcatttgagtttattgatgtataagaccctgatttgaccttttggtgtggagctcaatctaccaactgatgcaagtgatctctattttcctggttgatatttcag
ATTCTCAATGTTCTCAGGGAATTTATGCTTTGGATAGCAGAGAAAATGCAGGAAAATGCATTTCCTGGCTGCCGCTTTCCATGCTTAGGAGTTAGGATGAAAACCAACTTTTGGGTTGGGAGAATTCTTAGGAGTTGAGCATAGTTGAGTGCCTATTCTTGAAGGATAATCTTGATTCAATGGAGAAGCAGCAGATAGGA
AACCAGCAGCAGCAGCAGCAGCAGCAGCACCATCAGCATCAACAGCAGCAGCAGCAGCAGCAGCATCAACAGCAGCCGCCGCCGCCGCCGTTGCTACGTGTTCAAGTCCCACAACAACAGGCCCAACATCAACAATTACAGCAGCCATATATGAAGACAGGCGAAAATGGTGTCTCCAAGACTCCTGATCGGACCAAAAG
AGATGAATGGAGCGAAGAAGCGGTCTGTACTCTTCTGGATGCTTATGAGTCGAAATGGCTTCTCAGAAATCGGGCCAAGCTCAAAGGAAATGATTGGGAGGATGTGGCAAAGCAGGTTTCTACTCGCAGTTCTGGAGTTAAATCGCACAAGACACAGTCACAATGCAAAAACAAGATTGAGTCTATGAAGAAGAGATATA
GGTCTGAGGCGGCGAGTATATGCAATCCTGGTTCTGGACCTTCTTCCTGGCCCTTCTTTGCAAGGATGGATGGGTTGTTAAGATGCACGACTGTGCCCCAAGCCAGGCCTGGTGGTGTGTGTGTTGATACGGGTGGACAGCCTGCACTCACCGATCTGGGAATGCAAGCCTTGCCCAAGGTGGAAATTGGAGATTCAGAG
ATGGTCTTCAAAAGGGTACAAGAGATCCATCCTAATCCAGGAGAATTCATTGAAGGAAATCTAAACCATTTGGCAGTAGTGGAAGCAGAGGGACAGATGCAGGACAGCAACCAGGAAGATGGTTCTAACACGTTGCCAAATAGGAAAGAGAGCGCAGCGTTGGACAGCGACACCAGTACTCCTCGGAGCAAAGTGGCAAA
TGTGGGAGAGGGCTCAGGAAAAGGCCATTCATCAAAACGCAGGAAGAATTCAAGCAGTGAAGTAGCGGAGAGCATTCGATCTTTTGCTGATTCAATCCTCAAGCTTGAGCAGGCAAAGATGGAGATGTACAAGGACTCAGAACGCTTGAGGGCAGAGACAGAGGTTAGGAGAGGCGAGATGGAACTCAAGCGCACAGAGA
TCATAGCCAAAACTCAATTACAGATAGCTAGATTGTTGTCTGGGAAAAGGGGTAAACGAAAGCTTGCTAATAAAAATTCTGCGTTGAAATCTGCACTTGCCGCAACAACAGCAGCTCCATCAGATGGTCCTGCTCCAGCCATGCAGGAGTGAGAAGAATAAGGTCAAAGGACGTCGATATTCGTTCACTCAATGAAAGTA
GAGCTGATCTTTCACTACAAGGCCCGAGTTTCTGTGCTATTGTACAGAAATTCTGAGACTCTCATGGATAGCTGTGTTTCTTCTTTACTTTTAAGGAACACATAGATTGTTCCTCATTCTATTTACACCTCTACATGAATGTGATATTGTACCATACCAAAGTATGGACTGCAAGCTCTGGTTTGATGGCCAAAAGTAAA
GAGGCAATATTATAGTATCCTATGGTTACTGGCTTGCAGTTGCTGTTGTACAGTAGTATCTGTTTCCAAGAATGGCAGGGTTTCGTGTGTTACTTCTACTATCATAAGTTCCTGTGTATTGAAAATCCATAGTACATACTGAACAGATCAAAAGTTTGATCTACTGAATTGAATACAATTTTAAGAGATCCGACTGGAGA
AATTAATAATTTTTAAAATTAGTAGTTGCATGCCATATGGTTTTAGCATGTGCACTGAATTTGAAACTTTTTCTGGATGTTCAAGTTTTTCATGAATCTTGAATCTTGTTTGTTCCAATGCAAATATTTATCAAACGTAGAGTTTTTATAGCTATGATAGCCTAGGTATAGTAAGATTCACTCTGTCATCTTAACATTAA
GCTGACATAGAATGAAAAAAATGTCAATAATCCAAATTCGATTGAGCCGGTTACAATTCACATAGTTTGATTCTCGGCTTATGGGCAGGTTGATCTCAAAATAGCACTTTATATGATATATGCTTCACTTTAGTGGGGTTGACAATGAATTGATATTTCGAGTAAACAGTGACTTCCTTTTTCACCAGGCTTGATTAATA
ATGTAATTTTCAGCCAAATTTAAGGGTAGTTCTTTTATCCTTTTCTGGGAAGTTGCTTCGAGAAATACACCCCGTGGTTGGGTGCTGCACGGCATAACATGGACTTAGGTGCAAGGTGTAAGGGGTATCAATTGTGCCAAAGTCGCCTGGGGTTGACCGTAGTGAGAGCAGAACTCAGGTGGACAGCTTAATAATCCTTG
TCGGCCTTATCAGCATGATAGTCTGTCAACCTCACTATTGAACCAAGGGCCCATGGCAAGGTAGGCTTGTTAGACCTTGTAGTTATTAATTACTTACTCCAGC