sp|Q9SA60|PPR6_ARATH ----> Pentatricopeptide repeat-containing protein At1g03100, mitochondrial
Intron 1 GTGATTTCTA ... ATACAGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 11 | 8 |
| A2 | -1 | 0 | 0 | 0 |
| A3 | 71.43 | 2 | 3 | 7 |
| A4 | 100 | 0 | 7 | 2 |
| A5 | 81.82 | 1 | 3 | 6 |
| A6 | 82.98 | 4 | 23 | 16 |
| A7 | 67.27 | 9 | 14 | 23 |
| A8 | 84.85 | 5 | 29 | 27 |
| A9 | 88.24 | 2 | 14 | 16 |
| A10 | 100 | 0 | 5 | 2 |
>TRINITY_DN42307_c3_g1_i2 from sample A8 / Example spliced isoformATTTTGCAAGAGCTCTTGAGGTGTTGGAGCTTGAAGAACAATCTCTCAAGAGGGGAGTGCCATACATGGAGAGGTTGATCCAAGGACATTCTTGAGAATTTAGTCTATGTTGACGCTCTTGATGATGACTCATGACATGGTATATACTCATTAAGAGATCATTTTAAGTCATGATTGATGACATAATATGCACTCTTTAA
ATTATAGTCTGATGATTTTTGGACTTTGGAGGTTGTATAGAGTCTCTATGTTCACGTATTTTTTTTTCTAAGTAAAACCTTATAGGGAAACCTAAGCGGTGCTTTCCCACATTTATGGATGGTATTCCTAGTAAACTCATTGACATAGACTAGTGTGCCTCACCTAGGGGGATTTGAATTGGGCACCTATTGGCACAGAA
CTAGCCAAATGGTCAACGACATTGGGAACAATTGGTTGAGCTAACCCCTTAGCCTCTCAATATCTATGTATTATGTTTAAGATCTTTAAATTTACGCATCTTAGAAGTAAATAATGAGCACCAAGGGAGTACAATGTATCCTAGTCAACTCATTAGGAAGAAAGGAGTTGTCAGTTTTGAGATGTTGAGATGTTGGGATT
TGTGGGAACAAAGTGATATTTTCTAAATCTATAGTGATTTGAAATATGTAAAAAATTATGCATGTTATTTTCAAATGGTGCCAATATATCCCAAATACTCATTCATATTGTTATTGCATAAGATAACCAGAAGGGAAATTAATAGCTACGAATATTAGTTATTGTAGGGTTGGCTAGTTATAAATGTCAAAAGTAGGGTT
GGCCAGTTATAAATGTCAAAATACAGTGACAAGGATATGGCTTGGGCTCTTAAATGAAGCTTTTTTTTTAATGTCTT
>TRINITY_DN42307_c3_g1_i3 from sample A8 / Example unspliced isoform:AACAATGGTGGACATGGAGGAGTACCCATCTGTCAATTTGTGGAGTACAGTGGTGACGCACATGGTTAAAACACATAATGGTGCCTGTTTAGCTTCACAGATAGTGATTGAGATGTGTTATTTCTTCAAAGATGGAAGGGTGGATCCGAGGAAGAGGAGCAATCGACCATTGCTTTCAATGAAGCCCAATACTGAAGTTT
TCAACGTTGCCCTCAATGGTTCTTTGGCCTTTGGGATGACTAGAAAGGCAGAAGAACTCCTGGAGCTGATGACTAGAGTAGGGGTGAAGGCTGATGTTACCTCAATTGCTCTAATGGCCCAAATATATGAGAGCAATGGCAGGAGAGAAGAATTGAAGAAACTAAAGAGGAATATTGATGAAAGACCTGGAATGCTTGAT
TACCATTATCAGCAATTTTACAACAGCTTACTGATAACCCATCTGAAGTTTGGTGATCTGGTTGCAGCCTCAGAGCTTATATTGGATATGCTAAAGCGTGCGAAAGCAGCTCGGATCTCACTTGTGGCAGCCAAGTCGGTACTGGCCACCGTTGCTAAGGGTTCACAAGGCCATGCTACATCAATGGATTATGGAGAGAA
GCACAATTGTTCTGCCACGCCTTTCAAGGCTGAGAAGTTACAAGCACCGTCCCTAGTTGAAGTCAGCAGTCATGGAGAGCTGGTAAGTTTTGAAAACCTTATACTTATTCCAAATCAGAAGGCTTATGCTAGATTGGTGAAGGGCTACTTAGAAGGAAATAGAGTTCTTGATTTAGCAGAGTTTCTGGTCAAGGTGCATA
GAGAGGAAGGTCCCGTCTCAATGGAAAATTCGATTAGTGCTCATGTAATTGATGCTTGTGTTGCAATGGGTTGGCTAGACCAGGCTCATGATATTATTGATGAGATGAATGCAGCCGAGATTCCAGTTGGAATTGGGGCGTACTCTTCGCTCTTGAAAGCTTATTGTAAAGCCCAACGACCAATAGAGGTCGCTACACTT
CTCAAGGAGGTCAGTAAAGCAGGGCTTCAGCTCGATGGGAGCTGTTATGATGCTCTTATCGAGTCACATTTTGCAAATAGAGATTTGCATGGTGCACTGGACCTCTTGGACCTCTTCAAGGAGATGAGAGAGGCAAAGGTCTCTTCCATTACAAATAGCTATCAACCACAGATGAATGGATTTGCAAAGGAAAGTAAACC
GAATTTGATGGTCCATTTGTTAAATGAAATCAATGACAACCAGCAGGTTGCTGTTGGGACACATGATTGGAATTCGGTCATCCACTTCTTTTGCAAGGCACACCTAATGAATGATGCACATAAAGCTTTTAAGAAGATGACAGCCTTGGGATATCATCCTAATACACATACATTTCATTCTTTGATACATGGATATTATA
CTTCAGGAGGCATGTATCAGGAGATATCAATGCTGTGGGCAGATATGAGAAGGATGGCAGCTGCATTTCCAGAGAGTGGAGTTAATCCCATAAATTTTGACCAGGAGCTGCTTGACACTGTACTGTACAATTTTGTTAGAGGGGCTTATTTTGCAAGAGCTCTTGAGgtgatttctatgatggaacagaagaaaatgttt
attgacaaatttaaatacagacagGTGTTGGAGCTTGAAGAACAATCTCTCAAGAGGGGAGTGCCATACATGGAGAGGTTGATCCAAGGACATTCTTGAGAATTTAGTCTATGTTGACGCTCTTGATGATGACTCATGACATGGTATATACTCATTAAGAGATCATTTTAAGTCATGATTGATGACATAATATGCACTCT
TTAAATTATAGTCTGATGATTTTTGGACTTTGGAGGTTGTATAGAGTCTCTATGTTCACGTATTTTTTTTTCTAAGTAAAACCTTATAGGGAAACCTAAGCGGTGCTTTCCCACATTTATGGATGGTATTCCTAGTAAACTCATTGACATAGACTAGTGTGCCTCACCTAGGGGGATTTGAATTGGGCACCTATTGGCAC
AGAACTAGCCAAATGGTCAACGACATTGGGAACAATTGGTTGAGCTAACCCCTTAGCCTCTCAATATCTATGTATTATGTTTAAGATCTTTAAATTTACGCATCTTAGAAGTAAATAATGAGCACCAAGGGAGTACAATGTATCCTAGTCAACTCATTAGGAAGAAAGGAGTTGTCAGTTTTGAGATGTTGAGATGTTGG
GATTTGTGGGAACAAAGTGATATTTTCTAAATCTATAGTGATTTGAAATATGTAAAAAATTATGCATGTTATTTTCAAATGGTGCCAATATATCCCAAATACTCATTCATATTGTTATTGCATAAGATAACCAGAAGGGAAATTAATAGCTACGAATATTAGTTATTGTAGGGTTGGCTAGTTATAAATGTCAAAAGTAG
GGTTGGCCAGTTATAAATGTCAAAATACAGTGACAAGGATATGGCTTGGGCTCTTAAATGAAGCTTTTTTTTTAATGTCTT
Intron 2 GTATTGATTC ... TCTTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.67 | 5 | 6 | 14 |
| A2 | 75 | 3 | 9 | 9 |
| A3 | 62.07 | 11 | 18 | 18 |
| A4 | 62.96 | 5 | 4 | 13 |
| A5 | 60 | 3 | 3 | 6 |
| A6 | 100 | 0 | 0 | 3 |
| A7 | 65.52 | 5 | 12 | 7 |
| A8 | 33.33 | 2 | 2 | 0 |
| A9 | 33.33 | 3 | 1 | 2 |
| A10 | 61.9 | 4 | 8 | 5 |
>TRINITY_DN91643_c0_g1_i2 from sample A4 / Example spliced isoformGCGAGAGTTCTTTGCGGCTCAATTATTTCAAACTTGGGAGCGCAGGCAAGACACACGACTGGGTTTTTACACAAAATTATGAAAATCAGGGTTGGGGCTGCGGCATCAAAGATTTTGCCGCGCTCGCCATGACAGTTGCAGCTCTCCAGCAGAAGAGGAGTACTAACCCGGCTGCTATTTTTACTTGCTTCTTCTCCAAA
TTTATCTTATCCTTTGTTTCTTCAAATCAATCTGCTGGAGTTACAGGCCAACATAATCGTGGGTCACACACAATCTTGAGGCAGGCTCGTAATCCTGCCATGTTGACAGAAGAACTGGAAAATGCCCTCGATGAACAGAGAATCGAAGATGCCATGAAGGGCTACGATCATTACAAGCAACTCGAAGGTTTTCCAAGTAA
GTCTCTTGTTAACAGGCTGATCAGTGTATTAGCGCACGCTGGAGATTCAAAATGGCTCGAGAACGCTTATGCTGTGGTGCTTTCAATCTTGGAGGAAAAGAAGCAGAGACAACTATTGGACCAAGAAGTTCTGACCCAATTGTGCTTGAGGTTTGCAACAGCACAAATGCCTGTCCCTGCTTCCACAATTCTGAGAACAA
TGGTGGACATGGAGGAGTACCCATCTGTCAATTTGTGGAGTACAGTGGTGACGCACATGGTTAAAACACATAATGGTGCCTGTTTAGCTTCACAGATAGTGATTGAGATGTGTTATTTCTTCAAAGATGGAAGGGTGGATCCGAGGAAGAGGAGCAATCGACCATTGCTTTCAATGAAGCCCAATACTGAAGTTTTCAAC
GTTGCCCTCAATGGTTCTTTGGCCTTTGGGATGACTAGAAAGGCAGAAGAACTCCTGGAGCTGATGACTAGAGTAGGGGTGAAGGCTGATGTTACCTCAATTGCTCTAATGGCCCAAATATATGAGAGCAATGGCAGGAGAGAAGAATTGAAGAAACTAAAGAGGAATATTGATGAAAGACCTGGAATGCTTGATTACCA
TTATCAGCAATTTTACAACAGCTTACTGATAACCCATCTGAAGTTTGGTGATCTGGTTGCAGCCTCAGAGCTTATATTGGATATGCTAAAGCGTGCGAAAGCAGCTCGGATCTCACTTGTGGCAGCCAAGTCGGTACTGGCCACCGTTGCTAAGGGTTCACAAGGCCATGCTACATCAATGGATTATGGAGAGAAGCACA
ATTGTTCTGCCACGCCTTTCAAGGCTGAGAAGTTACAAGCACCGTCCCTAGTTGAAGTCAGCAGTCATGGAGAGCTGGTAAGTTTTGAAAACCTTATACTTATTCCAAATCAGAAGGCTTATGCTAGATTGGTGAAGGGCTACTTAGAAGGAAATAGAGTTCTTGATTTAGCAGAGTTTCTGGTCAAGGTGCATAGAGAG
GAAGGTCCCGTCTCAATGGAAAATTCGATTAGTGCTCATGTAATTGATGCTTGTGTTGCAATGGGTTGGCTAGACCAGGCTCATGATATTATTGATGAGATGAATGCAGCCGAGATTCCAGTTGGAATTGGGGCGTACTCTTCGCTCTTGAAAGCTTATTGTAAAGCCCAACGACCAATAGAGGTCGCTACACTTCTCAA
GGAGGTCAGTAAAGCAGGGCTTCAGCTCGATGGGAGCTGTTATGATGCTCTTATCGAGTCACATTTTGCAAATAGAGATTTGCATGGTGCACTGGACCTCTTGGACCTCTTCAAGGAGATGAGAGAGGCAAAGGTCTCTTCCATTACAAATAGCTATCAACCACAGATGAATGGATTTGCAAAGGG
>TRINITY_DN91643_c0_g1_i3 from sample A4 / Example unspliced isoform:GCGAGAGTTCTTTGCGGCTCAATTATTTCAAACTTGGGAGCGCAGGCAAGACACACGACTGGGTTTTTACACAAAATTATGAAAATCAGGGTTGGGGCTGCGGCATCAAAGATTTTGCCGCGCTCGCCATGACAGTTGCAGCTCTCCAGCAGAAGAGGAGTACTAACCCGGCTGCTATTTTTACTTGCTTCTTCTCCAAA
TTTATCTTATCCTTTGTTTCTTCAAATCAATCTGCTGGAGTTACAGGCCAACATAATCGTGgtattgattcaaaccattactctaatcatcgcaagtttgccttttctaatgaaggtatcagtgggttttctcttcatgggttggtctattttagcccttcgtatagatatttctctttttcagGGTCACACACAATCTT
GAGGCAGGCTCGTAATCCTGCCATGTTGACAGAAGAACTGGAAAATGCCCTCGATGAACAGAGAATCGAAGATGCCATGAAGGGCTACGATCATTACAAGCAACTCGAAGGTTTTCCAAGTAAGTCTCTTGTTAACAGGCTGATCAGTGTATTAGCGCACGCTGGAGATTCAAAATGGCTCGAGAACGCTTATGCTGTGG
TGCTTTCAATCTTGGAGGAAAAGAAGCAGAGACAACTATTGGACCAAGAAGTTCTGACCCAATTGTGCTTGAGGTTTGCAACAGCACAAATGCCTGTCCCTGCTTCCACAATTCTGAGAACAATGGTGGACATGGAGGAGTACCCATCTGTCAATTTGTGGAGTACAGTGGTGACGCACATGGTTAAAACACATAATGGT
GCCTGTTTAGCTTCACAGATAGTGATTGAGATGTGTTATTTCTTCAAAGATGGAAGGGTGGATCCGAGGAAGAGGAGCAATCGACCATTGCTTTCAATGAAGCCCAATACTGAAGTTTTCAACGTTGCCCTCAATGGTTCTTTGGCCTTTGGGATGACTAGAAAGGCAGAAGAACTCCTGGAGCTGATGACTAGAGTAGG
GGTGAAGGCTGATGTTACCTCAATTGCTCTAATGGCCCAAATATATGAGAGCAATGGCAGGAGAGAAGAATTGAAGAAACTAAAGAGGAATATTGATGAAAGACCTGGAATGCTTGATTACCATTATCAGCAATTTTACAACAGCTTACTGATAACCCATCTGAAGTTTGGTGATCTGGTTGCAGCCTCAGAGCTTATAT
TGGATATGCTAAAGCGTGCGAAAGCAGCTCGGATCTCACTTGTGGCAGCCAAGTCGGTACTGGCCACCGTTGCTAAGGGTTCACAAGGCCATGCTACATCAATGGATTATGGAGAGAAGCACAATTGTTCTGCCACGCCTTTCAAGGCTGAGAAGTTACAAGCACCGTCCCTAGTTGAAGTCAGCAGTCATGGAGAGCTG
GTAAGTTTTGAAAACCTTATACTTATTCCAAATCAGAAGGCTTATGCTAGATTGGTGAAGGGCTACTTAGAAGGAAATAGAGTTCTTGATTTAGCAGAGTTTCTGGTCAAGGTGCATAGAGAGGAAGGTCCCGTCTCAATGGAAAATTCGATTAGTGCTCATGTAATTGATGCTTGTGTTGCAATGGGTTGGCTAGACCA
GGCTCATGATATTATTGATGAGATGAATGCAGCCGAGATTCCAGTTGGAATTGGGGCGTACTCTTCGCTCTTGAAAGCTTATTGTAAAGCCCAACGACCAATAGAGGTCGCTACACTTCTCAAGGAGGTCAGTAAAGCAGGGCTTCAGCTCGATGGGAGCTGTTATGATGCTCTTATCGAGTCACATTTTGCAAATAGAG
ATTTGCATGGTGCACTGGACCTCTTGGACCTCTTCAAGGAGATGAGAGAGGCAAAGGTCTCTTCCATTACAAATAGCTATCAACCACAGATGAATGGATTTGCAAAGGG