NA ----> NA
Intron 1 GTTTGGGGTT ... CTTGCTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 1 | 1 |
| A2 | 68.42 | 6 | 2 | 13 |
| A3 | 77.78 | 2 | 7 | 7 |
| A4 | 100 | 0 | 1 | 5 |
| A5 | 77.78 | 2 | 0 | 7 |
| A6 | 85.11 | 14 | 14 | 80 |
| A7 | 71.43 | 18 | 22 | 45 |
| A8 | 70.18 | 17 | 20 | 40 |
| A9 | 78.21 | 17 | 12 | 61 |
| A10 | 76.92 | 18 | 10 | 60 |
>TRINITY_DN43411_c0_g1_i2 from sample A7 / Example spliced isoformATCCCCATCCGCATCCTCGCTGGTCGGCCAAAATGTGGGCAGAAGAAACAAGCGTGGCATCCATGGTCTCCCGCCCTTTAGTCCGCGCACTCATCTCTTGCCGTGACATTGCACCTGACCCATATTCATCCCTCACATCATCTTATCTCATATGCCTATAAATATTCTTGGTTTCTCATTGATCCTCTGCAACTGATTTC
AAGAAGCCAGGCCTGTTACTAACAAGGAACAGCCCTGTGAGGAGATATACATCGTTGGGGAAGGAGAAACTCTGCAGACAATCAGCGAGAAATGTAACGCGCCCTTCATTCTGATGGACAACCCTCACATCCAAGATATCGACGATATCTCAGAAGGTGTGCCTCTCAAAATAAGTTACGAGAAAACAGAAGAAGAAATC
AGATACTCAGCTCAAAGAGAAAACTGGCGGGTGGGCTAGTTACCAGATGCCCTGAAATTTGTCCATGGCGGATTATTGATACACTTAATCTTCCTTGTAAATTTGTTTACAGCACGAACTTATTTAAAGCTCCTTCACGGAAGAAATTATATCTGATCATAGTATTGAAGAGCATAATAAATATTGTAAAGGGCGTTATA
CAGATCAATCCGTCTCCTCCTGTAATTTTTTCTTTGTAAATGACAAAATATGCTTCAGCTATTCAGCCATATTGAATCCATATATATACAGTAATTTCTCTTCTGGGTAACATGTATTTTGGATCATAATATCTTTCATTTTGGAAACTATGGAGATCGAATCTATTTTTACAGGAAGATCCGCGTTTTGGCTTCCTGGT
TAAGACATGGGGG
>TRINITY_DN43411_c0_g1_i3 from sample A7 / Example unspliced isoform:ATCCCCATCCGCATCCTCGCTGGTCGGCCAAAATGTGGGCAGAAGAAACAAGCGTGGCATCCATGGTCTCCCGCCCTTTAGTCCGCGCACTCATCTCTTGCCGTGACATTGCACCTGACCCATATTCATCCCTCACATCATCTTATCTCATATGCCTATAAATATTCTTGGTTTCTCATTGATCCTCTGCAACTGATTTC
AAGAAGgtttggggttctactgttctttacatattctgtatatccttccactcaatctgtatatatactttcaaaaatcatggcagcactaaatagtagatcggtttctttgagtttctccttctggtttgttattgtgttcctgacagctcttgctacagCCAGGCCTGTTACTAACAAGGAACAGCCCTGTGAGGAGA
TATACATCGTTGGGGAAGGAGAAACTCTGCAGACAATCAGCGAGAAATGTAACGCGCCCTTCATTCTGATGGACAACCCTCACATCCAAGATATCGACGATATCTCAGAAGGTGTGCCTCTCAAAATAAGTTACGAGAAAACAGAAGAAGAAATCAGATACTCAGCTCAAAGAGAAAACTGGCGGGTGGGCTAGTTACCA
GATGCCCTGAAATTTGTCCATGGCGGATTATTGATACACTTAATCTTCCTTGTAAATTTGTTTACAGCACGAACTTATTTAAAGCTCCTTCACGGAAGAAATTATATCTGATCATAGTATTGAAGAGCATAATAAATATTGTAAAGGGCGTTATACAGATCAATCCGTCTCCTCCTGTAATTTTTTCTTTGTAAATGACA
AAATATGCTTCAGCTATTCAGCCATATTGAATCCATATATATACAGTAATTTCTCTTCTGGGTAACATGTATTTTGGATCATAATATCTTTCATTTTGGAAACTATGGAGATCGAATCTATTTTTACAGGAAGATCCGCGTTTTGGCTTCCTGGTTAAGACATGGGGG