NA ----> NA
Intron 1 GTAAACCTAG ... GGATTATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 81.53 | 53 | 212 | 256 |
| A2 | 78.55 | 46 | 149 | 188 |
| A3 | 80.97 | 51 | 192 | 242 |
| A4 | 77.73 | 47 | 162 | 166 |
| A5 | 82.55 | 24 | 108 | 119 |
| A6 | 100 | 0 | 4 | 5 |
| A7 | 86.67 | 4 | 29 | 23 |
| A8 | 60 | 1 | 2 | 1 |
| A9 | 87.88 | 2 | 13 | 16 |
| A10 | 85.6 | 9 | 44 | 63 |
>TRINITY_DN48537_c0_g1_i4 from sample A7 / Example spliced isoformTTAAGTTTAATTTGCATTCGAACCTTAAAACGCGTTGACAGATCAAAGAGCTCCACAATACCATACACTGAGACACTCATTACCCAAACGGAGGATACGAAGCACGAACTCGCTCTCCGCTTCTCATGGGATGGTGCAGCCTCCTCCGCCCCGCGCCTCCCGAGGTTGCTGCTCATAATTAATAAACAAAATGCCGACTA
ATAAATAAACAAAATGCCGACGCCGAATAAATAATTCAACGCTTGTAGATGTCCGCAGCCCAAACGGCAGGGAGAACGAAGGTCAGGGGTTTGGAAACGGGATCGCTCAGCAGCCCGGACAGTTTTACAGCGGAATTTCTTCATCCGGGACCATTTGGGGTTAAACAGAACCGATTCAGGTAAGGAGAAGATGTCAGCAA
TGGGAGATGGGATAAATTTTAATGCCAATGGAAAATTTTCCCCGTTTGTTTCAGCCCCATTTTCTACTTCTTCTGCATCTTTTTCATTTGCTAGTAATAATGTATTTAACTATCCGAGCAAAGATACTGCGGCGCCCTTTCGGGCGGAAGCCTCCACGAGTTCTCAGAGTAGTAGACCTGCTGCTATTCCGAGGGCAAGG
TTTGTGAAGGCGCGAAAAAATTTAATTGCATCCAAAGGTAAATCTGCTGCCCTTACTGGTAAATTATATGATGGTGAGAATAGCTCGGGGGTTGAAAAATCGGGATATAATCCTTTTTGGTCAAATTCAAATTCGGGGTCCGACCAGACTGGATATTGCTTTAAGCGGGATCTGAATCAAAGTTCAAGTACTTCTGCATC
GTTTC
>TRINITY_DN48537_c0_g1_i3 from sample A7 / Example unspliced isoform:TTAAGTTTAATTTGCATTCGAACCTTAAAACGCGTTGACAGATCAAAGAGCTCCACAATACCATACACTGAGACACTCATTACCCAAACGGAGGATACGAAGCACGAACTCGCTCTCCGCTTCTCATGGGATGGTGCAGCCTCCTCCGCCCCGCGCCTCCCGAGGTTGCTGCTCATAATTAATAAACAAAATGCCGACTA
ATAAATAAACAAAATGCCGACGCCGAATAAATAATTCAACGCTTGTAGATGTCCGCAGCCCAAACGGCAGGGAGAACGAAGGTCAGGGGTTTGGAAACGGGATCGCTCAGCAGCCCGGACAGTTTTACAGCGGAATTTCTTCATCCGGGACCATTTGGgtaaacctagaaaccctaactccagttctaatttttttttgc
gattacgaatccaggtggcatgcctattaatctcgatagcaatacgaatttaaattcatcggctgcttattccttttcttcttccgggagtttccgtgatgcacaccctcacgctggattatcagGGTTAAACAGAACCGATTCAGGTAAGGAGAAGATGTCAGCAATGGGAGATGGGATAAATTTTAATGCCAATGGAA
AATTTTCCCCGTTTGTTTCAGCCCCATTTTCTACTTCTTCTGCATCTTTTTCATTTGCTAGTAATAATGTATTTAACTATCCGAGCAAAGATACTGCGGCGCCCTTTCGGGCGGAAGCCTCCACGAGTTCTCAGAGTAGTAGACCTGCTGCTATTCCGAGGGCAAGGTTTGTGAAGGCGCGAAAAAATTTAATTGCATCC
AAAGGTAAATCTGCTGCCCTTACTGGTAAATTATATGATGGTGAGAATAGCTCGGGGGTTGAAAAATCGGGATACAATCCTTTTTGGTCAAATTCAAATTCGGGGTCCGACCAGACTGGATATTGCTTTAAGCGGGATCTGAATCAAAGTTCAAGTACTTCTGCATCGTTTCGTAATGTGTCTGGGGAGAATATTGGTAA
CCAGGGATTTAAGCCGGTGCAGGATGACCATCCAAAGCCATTTGCAAAGAATGACTCGGCTGACGAGAATGACGATGAGCAGTTGCAGAACCGAATTCGTGGCTGGAACCCTTTTGTTGGAACACCCGGTAGTGGTTCAGGGGTTGCAGCCAATTCTTATTTTAAAAAGCATGAAGAGAGCAGGAGCAGCTTTACATTTA
GAGGAAGCATGGAGGATAAGTTACCGTCCAAAAACTATAGTGAGAATAATGTTAATGTAGCAGATGGAGGTTCAGTTTCTGGTTGGCCGGGGGCAGTCAATGTTGGAAGCACAGTCGATGAGGTTAACCATGCTAGAAACCGAAGTGATGGCATGGCCAGTATTAAACAGCGACCGTCTAAGCCATCTGAGATGAAGTCT
GGCAGTGTAGATGGTCATTTGTGCAGCACAGAAGATGCTGCTCATGGAGCATTTGTCTTTACTACAGCACCCAAACCAAAGTTTAGTGTTAGATCCAGACACAAACAAGATTTGCGAACTGGAGAATGTGGCAACAGCAGTAGCTTGAAACAAGCTGCGGGTACATACGACGGTCCATTTGCATCTCAAGCATCTAACTC
TGACACCAACGGATTGAAGAAAAGTGTTGATGAAAAGTATGAAAATCCATTTACTAATCAAGCATCACTATCTGGATCATTTAGCGGAGGTGCCTGCACATTTGATAATCCATTTGCAGCTAAGATGCCAGAATTTGATAGTTTTGCAACTGACAGCTCGATTGGATTGACAACTGGCAACCCAATTCCTTCAACCTTCA
TCTTTAATGCAGGGGGTGAGTTTGAAAGCCAGAGCAAGAAAGTTGCAAGTCCACTGGTTGAACCGTTTTCATTCTCTGAAGGTTCTGCCTCTGGTTCCGCTGCACATGTATTTAGTGGCAGGCCTACAAAAGAAACTGCCAACAAGGTTCATCTCTCAAGCAACACTGGAGAAATGGGAGCAAATCCTACAACCTGGGAG
ACACCCCAATGTGAGGGTAAATCATCAAGTAAAGATAGTTCTTGGCCTGCTATGGGGAGTTTGTATTCGAGTTTGAATCACATTTTTGAATTTAGTGCAAACAAAGAATCGAGCAAGAGCCACAGTACAAGGAAAAAGAGAGAAAATTATCAGTTGCCCACATCCATACAACGCAAACTTGGTAGGCGCTCTGCTCCTAA
GCCAAAAAGGTACATGCCATGTTCAGCTTCAGTCAATCACGTTGAGGGAGGCTCACCAATGGACTTCTCTCCTTACAATGAAACTGCTTCTAAAGACGAGTCTCCCTCTGGAAATCATAACATGCCAGATTTGGGACAATCTTCCGTGGCGTGGGAAACTTCTGTCCAGTATGGTGCTCAAACAAGGTTCGATTTGCACG
AATCTCTTGTAATGGAAGCTAAGGTTGAAGAGCTAAGGGCTGCAGCTGTAAACTTACATATTGGTACTGATAAGGAAACAAATGCCAAAAATGACCACCAGGAAAAGCCATCCAAAGGAGCAGAGTGTCCATCTTGGCAGGGAAGTAACAGCACCTATGAAGCAGAATCTTTTATTCATGATAGATGCAATGAAAGTAAA
AGGCCATCTGCTGAAGACCAGATATCTATTCCAAGTTCTGAAAGTGAGTGGTTAAATTCTAAAATGGAAAAGGTAAGAATTGATGACGGTGGTGCAAAAGTGGAAGATGAAGAAAGCAGCCAAAGTAAGCAGTTCACGTTTGCATCTTCCTCTGTTGGTTCAAAAGCTGAAGAAAGAAGTCAAAGTAAGCAGTTTACCTT
TTCGTATTCCTCTGTTGGTTCAAAAGC