NA ----> NA

Intron 1 GTTTGTCTCT ... TTCTGCGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	77.59	5.5	19	14.5
A2	63.64	12	21	11
A3	90.32	3	28	14.5
A4	84.62	2	11	11.5
A5	77.78	4	14	4
A6	74.59	15	44	11
A7	67.44	73	151	30.5
A8	69.15	63	141	28.5
A9	59.55	79.5	117	30
A10	57.88	73	100	17

>TRINITY_DN46904_c1_g2_i3 from sample A7 / Example spliced isoform

ATGTTATGTGATAACTGAGAGGGCGGGAGGTGCAATTACATTTCGTTATCGCATTTATGCGCGATGGTGAAGGAGGGAGGTGAGGAACAGAAGCTGATGAATGGGTTTCACATCGGCTGCACGATGGCAATGAAGATGGATTTCCTCTCACAAGGGAAGTTTTCCGGCAGACGAACACTGTACACTGGCTGGAGTGTTGT
TTCACCATCAGGAGCGAACAAGGGAAGTCGCTCGAACAAGATCGGTCAAAAGAAATGAAGATCTGGCTTTCTTTCATTCATTTTAAGATTACGATTTCTGATGTAACTTAATTTAGTTTTTCAGTCTGCACACGAGAGATCGGAGGACAAAGCATGAATGAGGAGAGAGCAGT

>TRINITY_DN46904_c1_g2_i2 from sample A7 / Example unspliced isoform:

ATGTTATGTGATAACTGAGAGGGCGGGAGGTGCAATTACATTTCGTTATCGCATTTATGCGCGATGGTGAAGGAGGGAGGTGAGGAACAGAAGCTGATGAATGGGTTTCACATCGGCTGCACGATGGCAATGAAGATGGATTTCCTCTCACAAGGGAAGTTTTCCGGCAGACGAACACTGTACACTGGCTGGAGTGTTGT
TTCACCATCAGGAGCGAACAAGGGAAGTCGCTCGAACAAGATCGGTCAAAAGAAATGAAGATCTGGCTTTCTTTCATTCATTTTAAGAgtttgtctctgtttttctcctttaatttgtttgttaatttctttatttcggcttattctaaagtatagaaacatgtcctttaacgaatcctcctttttctgccatttacgat
ttctgaattacaacttaatttggttttaaattctgcgcagTTACGATTTCTGATGTAACTTAATTTAGTTTTTCAGTCTGCACACGGTAATTTATGAATCCTTTTTAATAATTTTCGTTTGAATATGATTTAATGCTTATTAAAGATTATTCCAGATTTTTTCCAGCTTCTATTGAAGTTATTGTTCTCAATTTATCCGA
TAGTTTTAGCGGGTTTGAATTCCATACAAATTACAATGGCCGG