NA ----> NA
Intron 1 GTAAGTGGTA ... TGCCTTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 55.67 | 8.3 | 6 | 14 |
| A2 | 55.23 | 4.9 | 7 | 5 |
| A3 | 60.39 | 7.9 | 19 | 5 |
| A4 | 50.29 | 9.5 | 12 | 7 |
| A5 | 100 | 0 | 2 | 3 |
| A6 | 69.71 | 9.1 | 13 | 28 |
| A7 | 69.1 | 16.4 | 21 | 52 |
| A8 | 58.11 | 12.1 | 15 | 18 |
| A9 | 60.54 | 5.9 | 11 | 7 |
| A10 | 48.69 | 23 | 14 | 28 |
>TRINITY_DN107987_c0_g1_i2 from sample A1 / Example spliced isoformCAAGGGCTTAGGAGGAGATCAAAGAGGGTTGAATCCAAGGGCTTAGGAGGAGAACAAGTTCAGGGTAGTGTCAAATGTGGAGGGCTGTTTGTGGGGTTTGGTGGGGCTCCCACAGCACTTATTTCTGACGAGTTTAAGGATGGGGGGGCTGAAAGGACTTCATCATTTGGGTGTCACAGCAGGAGTAAGAGCTGGAGTTG
GGCATTTTCAAGTCCTTTAAGGGCCTTCATACATTCAAAGAGATGGAGTAATAAGGCCAGTAATGAGGATGCTTCTGCTCCTGCTGGTGCTGGTTCATCCCCTTCAGGGTCTCTCATGGAGATTGACAGAGGCTGATTTCTGCCTGAAAATTTCAGTTTTCAATGTATTTTAGATGGATCAGGGCACAACCATGACATTG
TGTAGC
>TRINITY_DN107987_c0_g1_i1 from sample A1 / Example unspliced isoform:CCCTTCTCAATCAGCGAAGATCCTGTCTATACCCATCTTACCATGCTGGTCCTTAGTGCTCACTCACAGGGATAAGGCCATGTTTGTAAACTTCTTGTCATGGGGCCTTTGGGAAGATGTGTGGGTAGTTGTCCAACATGAATATGAAGTGGGCTTCCAAGGTTTTTATGGATTTAACACCATAAGTTGGATCAAACACA
GAATTTGGTGATAGAAATGTCTGAACGTACCATGGTTATGCCAATATTAGATTGCCGTTGTTGAGCATTCTCTGCAACTTGTTTTGGAGTTCTTGAAGCTGTTGGCCATGGCTGAAGAAGTGGAAGAGCTGCACGAGAATTCATTCTGTAGAATCCATCCAGCTCAGTCCGCAGTAGGAATTTGTTCAGTCTGTCTTCAA
GAGAAGCTGGGGAAGCTCGTTTTCTCTGAGAGGCAATCGGTATTTTCACAGCAGGGCGACATGATGGGCTCTTCTTACTCTTGCTCCTCGTCTTCATCCGAGACGACCAAGAAGACCAATGGGGAGAATGTGGACGTGGGCAGCACAGGGAGAGTTTCGTCTCTTATGGATAAAGATAGATCGAAGCAGCAGCAGCGTCC
GGGATCTGGTGAAGGCTTCGTGATGTTGAGCAGAAGCAAGACTGTGGCCACTTCCAGGAGAATCAGTACCCTGCAGGAAACGAACCGATGTCCTCCTCCTCCTCCTGGAAAAAAGAAGGGATCCTTCTGGTCCTTTTTGTACTTCACAAAGAGGAAAAGTGAAGCAAATGGTGTCCAGCATGTAGATGAGAAAGCAATGA
ATGGGGACAATAAGGTTGAGAGCGAGGAAGGGCCACATTTGAATTTTTCGTCATCATTAGCATTTGAGGGGAAGGTCATGAGGTCGAGATCTGTGGGGTACGGGAGCAGAAGCTTTTCTGCAGCGAGCTATCAGAAGAGCCCAATTGGTGGGTTCAAGGATTGTAGATCAAAGAGGGTTGAATCCAAGGGCTTAGGAGGA
GAACAAGTTCAGGGTAGTGTCAAATGTGGAGGGCTGTTTGTGGGGTTTGGTGGGGCTCCCACAGCACTTATTTCTGACGAGTTTAAGGATGGGGGGGCTGAAAGGACTTCATCATTTGGGTGTCACAGCAGGAGTAAGAGCTGGAGTTGGGCATTTTCAAGTCCTTTAAGGGCCTTCATACATTCAAAGAGATGGAGTAA
TAAGGCCAGTAATGAGGATGCTTCTGCTCCTGCTGGTGCTGGTTCATCCCCTTCAGGGTCTCTCATGGAGATTGACAGAGGCTGATTTCTGCCTGAAAATTTCAGTTTTCAATGTATTTTAGATGGATCAGGGCACAAgtaagtggtatatcaatttttttttaggcttttttgtttctttctttttttacgtttgcatt
ctttgagtcccttgagaggaagaagaagatgcaagtaagtctgtgggcatcagtaaaatcatctgctctgcttttgttctgtcttgtgcctgttcttctgttcattcatggcgttggggatggggtcttgcaactccatgagatttgaacagtgaacttgttgccacagcttaactgcattagacaagcctctctttctc
ttcctctatctaccgtgagaaactgtccattgtcttgatgcattgatcctgttgaattcttgccttgtagCCATGACATTGTGTAGCGGTGCCAGTCTCTAGTTTCCGAAGAGTGGTGTTCATGTATTGCCTCCAGAATGTGCCCGCAACACATTTTGATGGCATGTGCAGAGGTAATCGGTTTCGGGGCCTGATTCAGG
AAATGGGTATGTTGACCTAGCAAGGTCGGGGTCCGGCAAATAAACTAGTAACCTGAAGGGATGCAGGTAATGGTTTTTGTCATTGGACACTGGAACAGTTCCTGCTTGTCTCATTTCTGGCATTCATGCAGCGTCATCTTCTACATCTGCTTCTGTTTGTTGTAGAGTAGAAAAAGGGTTTATAGTCATTGAATTCTAAG
AAACTGCCAGAATGGTATCAAGGCCTGAGATTGTGGAGGTTGGTATATGTAGGTGATTGAGATGAAAAATAATGTACATGTAGGTGATTGAGTGATTTTGAAGTTCCTTTTGTGTTCATTTGAAAAAAGAATCCCTAGGAATGATTCATGAAGCAGGGTGTCAGTGAGCAAGGACCAAAATCAGACAATAGATTGCAAGC
AAAATTGAGTTCAGTGTAAAGTTACATGGTCAATGATATTCTATCTAGTG