sp|Q9LI74|CHUP1_ARATH ----> Protein CHUP1, chloroplastic
Intron 1 GTAAGACTTT ... TTTTGTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 12 | 11 | 1 | 2 |
| A2 | 20 | 10 | 2 | 3 |
| A3 | 27.27 | 4 | 0 | 3 |
| A4 | 33.33 | 2 | 0 | 2 |
| A5 | 27.27 | 4 | 1 | 2 |
| A6 | 14.55 | 47 | 7 | 9 |
| A7 | 16.67 | 45 | 6 | 12 |
| A8 | 23.98 | 84 | 18 | 35 |
| A9 | 21.21 | 52 | 9 | 19 |
| A10 | 25 | 18 | 3 | 9 |
>TRINITY_DN38108_c0_g2_i2 from sample A8 / Example spliced isoformGTAGAAGCTACAGCGATACGAGAGAAAAGTGGCGGGTTTGGCAAGCATTATGGAAACCGTTTTTCATTTCTTGTGATTAGCGGTATTGGATTGGCGTCACTTGTTCAATGAAGTCTTCCGTGGATTTAAAGGCCTAAAGCTGTTTTGCGGGACAAATTATAGTGAAGATGATTGAGTAGATGGTCGAGGATGAGTGGAAG
GTAAAGAAAATATACATATGTTGGTGAGAGTAGTCCTCGCTGCCACTTTTTCTGCCGCAGCATACATATTTCAACATCTCAAGAACAAGCAACAGTGTTCAGACAATTCTGCAGATCTAGAACATGGAGACGAAAAGGAAGAGCAAAATGAAGAATACAAGGAAGACTTATATGCACACAATAATGTTGATTCAATACAT
AAAGAGGAAGAGGAAGAAGAGGAAGTCAAAAGAGTTAACAGTGTCATGAGCCCATCTTTGAGTAGTAAGAGCTTTTCGGATGGAGAACAAATCCTCTTGCCTGAATTTGAAGATCTTTTGTCAAGCAGTTTGGAGTTCCCATCTGAAAAGGGAAGCCTCACTGAGACAAACTTCGGGAAATCTGGCTTATCATATGAGGC
TAAAATGGATAATAACTCAGTTGAACTCAATAGATTAAGGAATCTGGTGAACGAATTGGAAGAAAGGGAATTTAAGCTTGAAGGCGAATTGCTTGAGTATTATGGTATGAAAGAGCAAGAAACCAGCATAGGAGAACTACAGAGACAACTTCAAATAAAAGTAGTGGAAATTGACATGCTCAGGATAAAAATTAATTCTT
TGGAAACCCAAAAGAAGAAAATGGAAGAGGAAGTAGCTAAAGCCATGATGATGAAGAAGGAACTTGACGCATCCAGGACAAGAATTAAAGAGCTTCAGAAACAGATTCAAATTGATTCTGCGCAAACTAAAGAACACCTTCTTATGCTCAAACAGCAAGTAGCTACCCTTCAAGCTAAAGAGAAAGAAGCTTCCAAAAGA
GATTTTGAGATTGAGAAGAAACTGCAGAATCTGAAAGAATTGGATGTGGAAGTGGTTGAATTAAGGAGGACCAATAAGGAGTTGCAGCATGAAAAGCGGGAGCTAACAGTGAAACTTGATGCTGCAGAGGCACAAATTACTACCCTTTCCAACATGACAGAGAGTGAAATGGTTATGAAGGTAAGAGAGGAGGCCAACAC
TTTGAGGCATGCAAATGCAGATCTATTGAAACAAGTTGAAGGACTGCAAATGAACCGGTTTAGTGAAGTGGAAGAATTGGTTTATTTGCGTTGGGTTAATGCGTGCTTGCGATATGAGCTGCGGAACTACCAAGCCCCACCTGGTAAAGTAACTGCACGAGACCTCAGCAAGGACTTGAGCCCCAAATCACAGGAGAAGG
CAAAGCAGCTTATGCTGGAATATGCAGGGCCCAATCTTTTATCTCTGCGTGAGAAAATACACACAGACACAGACTTTGATAGTGTATCCTCACAACCATCCACACCTTCCGAGAGTGACGATTTTGATGATGCATCGGTTGACAGTACGTATAGCAGACAGAGCAGCTCTAAAAAAACAAGTTTGATTCGGAAGCTGAAA
AGGTGGGGAAGAAGTAACGATGACTCTACAACATCAAATAGTAGTTTATTTGGAGAGGAAAGAGGATATATAAGTTCACCAAGCAGAATGAAACCAGGTCACAGACATTCTATGTCAAAGACGTCATTAGAAGCTTTAATGTTAAGAAATTCCAGTGATAAAGTTGCCATCACCTCATTTGGTATAGGGGATCAGGGATA
TAGCACAATGGGGCGAACAAAGTCTAGTTCTTCTATCAATTCTCATGAAACTATGTCGTGGACGGTTGATTCACCAGAAAGTGCAAATCTTCCACATATTAGAACAAGAAATCAGGAAAAGGATGATTCCTTAAACAATGTTGCAGCATCGTTCCAACTTATGTCAAAATCTGTTGGAGGTGTGCTTGATGATAAATACC
CTGCTTTTAAAGAGAGGCATAAATTGGCAATGGAAAGGGAAAAGACAATCAAAGAAAAAGCAGATCAAGCAAGGGCAGAGAAGTTTGCTGAAAAGGGAGAGGTGTCTAGTGGAAAAATTAAGATGGACAATTCAGTCAGAACACCCCTCCACAATTCAGTCAGAACACCCCTCCAGACAGCGAGGATAGAGAAGCCTATA
GGAAAATTGGCTGTGAGACTTTCTGCAATGAATGAGCATTCAAATAACCATTCAAAGGAGCAGCCGAGTGAGATTCAAGAAATCAGCAAAATGAAGCTTGCTGGAATACAAAAAAGACCTCTACGCATTGCAAAGCCACCTCCTAGACCGACAATTTCTTCTTCCCCTGGGTCTAATACTGTAAAAGCTACTAGTGGCAT
ACCCATGCCCCCACCTTGTCCACCTCCTCTACCACGTGCTCCTGGTGCGCCTCCACCTCCACCACCACCTCCTGGAGGCATGCTAAAATCACAAGGACCATCAGGAGATAAAGTGCACAGGGCTCCAGAGCTTGTGGAATTCTATCAATCTTTGATGAAACGAGAAGCTAAGAAGGAGGCTGCTACTATGGCATCTGCAG
CATCTAATGTTGGAGATGTTCGTAATAACATGATTGGAGAGATAGAAAACCGGTCTGCATTCCTCCTATCTGTCAAAGCTGATGTGGAGACCCAAGGTGATTTTGTTCAGAACTTAGCCACTGAGGTTCGAGCAAGTGCTTACAAGAATATAGAAGATGTTGTGGCATTTGTGAACTGGTTGGATGAGGAGCTGTCTTTC
TTGGTTGATGAGCGTGCAGTACTCAAACACTTCGACTGGCCTGAGAGTAAAGCTGATGCCCTGAGGGAAGCAGCCTTTGAATACCAGGATTTGAAGAAACTGGAATCATTAGTGGCTTCATTTGTTGACGATCCAAAACTCTCATGTTCATTTGTTGACAATCCAAAACTCTCATGTGATGCTGCATTGAAAAAAATGTA
TTCTCTTCTTGAAAAAGTTGAACAAAGTGTTTACGCCCTTTTGCGCACACGAGACATGGCGATTGCACGATATAAAGAGTTCAATATTCCCACAGATTGGCTGCTTGATTCTGGTGTCGTGGGCAAGATTAAACTTGCATCTGTTCAACTTGCAAGAAAGTACATGAAACGGGTTACATCAGAGCTAGATGCTGCTTCGA
ATGCTCCAGATAATGAGCCGTTTAGAGAGTTCCTACTTTTGCAAGGTGTACGATTTGCATTTAGAGTTCACCAGTTTGCTGGAGGTTTTGATGCAGAGAGTATGAATGCTTTTGAGAATCTGAGGAATCGTGTACATTCACAAACTGAAGAAACGGATAAAATGAGTTCAACTAACTAAGGTTTCTTGCGTTCACATTTG
CCTCCAATCCATAATATTGGTTTGGTCCTTATGGTGGTTGTCTTGTGGGATTTTAGAGAATTTTTCTTTGTCACAAATATGTATTTCATCTCTTTTAATTTCAAGGTGGATCTGTACCTATAGCTTGTCAGTTTTTCAACTATTTTAGGTTAAGGGAACATTTCCTTTAAAGAAGCCATGCCCAGTAGATAGTAGGTGGT
TGTACCATACTGGTGAAGTAGGATATGTAATATCAAAATCATTTGTAGAATGTTGTGCATCCATTACATATTGCACATTGAAATGTACACTGTAAATGGTAGAGGCAAGCATCTTAGGTGTTGCTTGAACTGTAGTCCACCGTTGTAATTTTATATTGGAAATATATTGCAAAACCGCTCAATCTAGTGATTCATCTGGT
TTCTCG
>TRINITY_DN38108_c0_g2_i1 from sample A8 / Example unspliced isoform:GTAGAAGCTACAGCGATACGAGAGAAAAGTGGCGGGTTTGGCAAGCATTATGGAAACCGTTTTTCATTTCTTGTGATTAGCGGTATTGGATTGGCGTCACTTGTTCAATGAAGTCTTCCGTGGATTTAAAGGCCTAAAGCTGTTTTGCGGGACAAATTATAGTGAAGATGATTGAGTAGATGGTCGAGGATGAGTGGAAG
GTAAAGAAAATATACATATGTTGGTGAGAGTAGTCCTCGCTGCCACTTTTTCTGCCGCAGCATACATATTTCAACATCTCAAGAACAAGCAACAGTGTTCAGACAATTCTGCAGATCTAGAACATGGAGACGAAAAGGAAGAGCAAAATGAAGAATACAAGGAAGACTTATATGCACACAATAATGTTGATTCAATACAT
AAAGAGGAAGAGGAAGAAGAGGAAGTCAAAAGAGTTAACAGTGTCATGAGCCCATCTTTGAGTAGTAAGAGCTTTTCGGATGGAGAACAAATCCTCTTGCCTGAATTTGAAGATCTTTTGTCAAGCAGTTTGGAGTTCCCATCTGAAAAGGGAAGCCTCACTGAGACAAACTTCGGGAAATCTGGCTTATCATATGAGGC
TAAAATGGATAATAACTCAGTTGAACTCAATAGATTAAGGAATCTGGTGAACGAATTGGAAGAAAGGGAATTTAAGCTTGAAGGCGAATTGCTTGAGTATTATGGTATGAAAGAGCAAGAAACCAGCATAGGAGAACTACAGAGACAACTTCAAATAAAAGTAGTGGAAATTGACATGCTCAGGATAAAAATTAATTCTT
TGGAAACCCAAAAGAAGAAAATGGAAGAGGAAGTAGCTAAAGCCATGATGATGAAGAAGGAACTTGACGCATCCAGGACAAGAATTAAAGAGCTTCAGAAACAGATTCAAATTGATTCTGCGCAAACTAAAGAACACCTTCTTATGCTCAAACAGCAAGTAGCTACCCTTCAAGCTAAAGAGAAAGAAGCTTCCAAAAGA
GATTTTGAGATTGAGAAGAAACTGCAGAATCTGAAAGAATTGGATGTGGAAGTGGTTGAATTAAGGAGGACCAATAAGGAGTTGCAGCATGAAAAGCGGGAGCTAACAGTGAAACTTGATGCTGCAGAGGCACAAATTACTACCCTTTCCAACATGACAGAGAGTGAAATGGTTATGAAGGTAAGAGAGGAGGCCAACAC
TTTGAGGCATGCAAATGCAGATCTATTGAAACAAGTTGAAGGACTGCAAATGAACCGGTTTAGTGAAGTGGAAGAATTGGTTTATTTGCGTTGGGTTAATGCGTGCTTGCGATATGAGCTGCGGAACTACCAAGCCCCACCTGGTAAAGTAACTGCACGAGACCTCAGCAAGGACTTGAGCCCCAAATCACAGGAGAAGG
CAAAGCAGCTTATGCTGGAATATGCAGGGCCCAATCTTTTATCTCTGCGTGAGAAAATACACACAGACACAGACTTTGATAGTGTATCCTCACAACCATCCACACCTTCCGAGAGTGACGATTTTGATGATGCATCGGTTGACAGTACGTATAGCAGACAGAGCAGCTCTAAAAAAACAAGTTTGATTCGGAAGCTGAAA
AGGTGGGGAAGAAGTAACGATGACTCTACAACATCAAATAGTAGTTTATTTGGAGAGGAAAGAGGATATATAAGTTCACCAAGCAGAATGAAACCAGGTCACAGACATTCTATGTCAAAGACGTCATTAGAAGCTTTAATGTTAAGAAATTCCAGTGATAAAGTTGCCATCACCTCATTTGGTATAGGGGATCAGGGATA
TAGCACAATGGGGCGAACAAAGTCTAGTTCTTCTATCAATTCTCATGAAACTATGTCGTGGACGGTTGATTCACCAGAAAGTGCAAATCTTCCACATATTAGAACAAGAAATCAGGAAAAGGATGATTCCTTAAACAATGTTGCAGCATCGTTCCAACTTATGTCAAAATCTGTTGGAGGTGTGCTTGATGATAAATACC
CTGCTTTTAAAGAGAGGCATAAATTGGCAATGGAAAGGGAAAAGACAATCAAAGAAAAAGCAGATCAAGCAAGGGCAGAGAAGTTTGCTGAAAAGGGAGAGGTGTCTAGTGGAAAAATTAAGATGGACAATTCAGTCAGAACACCCCTCCACAATTCAGTCAGAACACCCCTCCAGACAGCGAGGATAGAGAAGCCTATA
GGAAAATTGGCTGTGAGACTTTCTGCAATGAATGAGCATTCAAATAACCATTCAAAGGAGCAGCCGAGTGAGATTCAAGAAATCAGCAAAATGAAGCTTGCTGGAATACAAAAAAGACCTCTACGCATTGCAAAGCCACCTCCTAGACCGACAATTTCTTCTTCCCCTGGGTCTAATACTGTAAAAGCTACTAGTGGCAT
ACCCATGCCCCCACCTTGTCCACCTCCTCTACCACGTGCTCCTGGTGCGCCTCCACCTCCACCACCACCTCCTGGAGGCATGCTAAAATCACAAGGACCATCAGGAGATAAAGTGCACAGGGCTCCAGAGCTTGTGGAATTCTATCAATCTTTGATGAAACGAGAAGCTAAGAAGGAGGCTGCTACTATGGCATCTGCAG
CATCTAATGTTGGAGATGTTCGTAATAACATGATTGGAGAGATAGAAAACCGGTCTGCATTCCTCCTATCTGTCAAAGCTGATGTGGAGACCCAAGGTGATTTTGTTCAGAACTTAGCCACTGAGGTTCGAGCAAGTGCTTACAAGAATATAGAAGATGTTGTGGCATTTGTGAACTGGTTGGATGAGGAGCTGTCTTTC
TTGGTTGATGAGCGTGCAGTACTCAAACACTTCGACTGGCCTGAGAGTAAAGCTGATGCCCTGAGGGAAGCAGCCTTTGAATACCAGGATTTGAAGAAACTGGAATCATTAGTGGCTTCATTTGTTGACGATCCAAAACTCTCATGTTCATTTGTTGACAATCCAAAACTCTCATGTGATGCTGCATTGAAAAAAATGTA
TTCTCTTCTTGAAAAAGTTGAACAAAGTGTTTACGCCCTTTTGCGCACACGAGACATGGCGATTGCACGATATAAAGAGTTCAATATTCCCACAGATTGGCTGCTTGATTCTGGTGTCGTGGGCAAGATTAAACTTGCATCTGTTCAACTTGCAAGAAAGTACATGAAACGGGTTACATCAGAGCTAGATGCTGCTTCGA
ATGCTCCAGATAATGAGCCGTTTAGAGAGTTCCTACTTTTGCAAGGTGTACGATTTGCATTTAGAGTTCACCAGgtaagactttaacctctgcattactgcattattaccaaaaacggaattagatggctgcctctgggaaatgttaactgtagggttgtatttgacaccaattttaatggcattaaatccattttattc
tagttctgcatgtatatgacctaatcatattgtatgcaatgtgtgtgcacctcttgaattctaacaaaagttttgtgtagTTTGCTGGAGGTTTTGATGCAGAGAGTATGAATGCTTTTGAGAATCTGAGGAATCGTGTACATTCACAAACTGAAGAAACGGATAAAATGAGTTCAACTAACTAAGGTTTCTTGCGTTCA
CATTTGCCTCCAATCCATAATATTGGTTTGGTCCTTATGGTGGTTGTCTTGTGGGATTTTAGAGAATTTTTCTTTGTCACAAATATGTATTTCATCTCTTTTAATTTCAAGGTGGATCTGTACCTATAGCTTGTCAGTTTTTCAACTATTTTAGGTTAAGGGAACATTTCCTTTAAAGAAGCCATGCCCAGTAGATAGTA
GGTGGTTGTACCATACTGGTGAAGTAGGATATGTAATATCAAAATCATTTGTAGAATGTTGTGCATCCATTACATATTGCACATTGAAATGTACACTGTAAATGGTAGAGGCAAGCATCTTAGGTGTTGCTTGAACTGTAGTCCACCGTTGTAATTTTATATTGGAAATATATTGCAAAACCGCTCAATCTAGTGATTCA
TCTGGTTTCTCG
Intron 2 GTTGAAGGAT ... TGTGACGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.76 | 52 | 19 | 6 |
| A2 | 32.08 | 36 | 17 | 1 |
| A3 | 33.33 | 28 | 14 | 3 |
| A4 | 34.09 | 29 | 15 | 4 |
| A5 | 29.41 | 12 | 5 | 1 |
| A6 | 20 | 4 | 1 | 0 |
| A7 | 25.64 | 29 | 10 | 4 |
| A8 | 33.33 | 2 | 1 | 0 |
| A9 | 25.45 | 41 | 14 | 5 |
| A10 | 37.5 | 30 | 18 | 0 |
>TRINITY_DN126696_c0_g2_i2 from sample A1 / Example spliced isoformTTGGACTGCAGCACGTCTCAAACGAGCTTTTGTTTGTTTTTTTGAAATATTTTCATATTTGGCTGTTTATTTCGACCACCCGTCAAAACTCTGCTCAAATGTCTTCAGATTTGGTTCAATTCTTATTCTTATCTGCTATATTCGGCACCAGATTGGCCACGCATTTCTCTAATTTCTCGCGTTGTTTACGAGCATTTTTG
GCGGTTTATTGCTTTTCCTTTAAAACCTGCTCCATTGCGAAGCTTTGGATGAAAATGTAGAAGCTACAGCGATACGAGAGAAAAGTGGCGGGTTTGGCAAGCATTATGGAAACCGTTTTTCATTTCTTGTGATTAGCGGTATTGGATTGGCGTCACTTGTTCAATGAAGTCTTCCGTGGATTTAAAGGCCTAAAGCTGTT
TTGCGGGACAAATTATAGTGAAGATGATTGAGTAGATGGTCGAGGATGAGTGGAAGGTAAAGAAAATATACATATGTTGGTGAGAGTAGTCCTCGCTGCCACTTTTTCTGCCGCAGCATACATATTTCAACATCTCAAGAACAAGCAACAGTGTTCAGACAATTCTGCAGATCTAGAACATGGAGACGAAAAGGAAGAGC
AAAATGAAGAATACAAGGAAGACTTATATGCACACAATAATGTTGATTCAATACATAAAGAGGAAGAGGAAGAAGAGGAAGTCAAAAGAGTTAACAGGGTCATGAGCCCATCTTTGAGTAGTAAGAGCTTTTCGGATGGAGAACAAATCCTCTTGCCTGAATTTGAAGATCTTTTGTCAAGCAGTTTGGAGTTCCCATCT
GAAAAGGGAAGCCTCACTGAGACAAACTTCGGGAAATCTGGCTTATCATATGAGGCTAAAATGGATAATAACTCAGTTGAACTCAATAGATTAAGGAATCTGGTGAACGAATTGGAAGAAAGGGAATTTAAGCTTGAAGGCGAATTGCTTGAGTATTATGGTATGAAAGAGCAAGAAACCAGCATAGGAGAACTACAGAG
ACAACTTCAAATAAAAGTAGTGGAAATTGACATGCTCAGGATAAAAATTAATTCTTTGGAAACCCAAAAGAAGAAAATGGAAGAGGAAGTAGCTAAAGCCATGATGATGAAGAAGGAACTTGACGCATCCAGGACAAGAATTAAAGAGCTTCAGAAACAGATTCAAATTGATTCTGCGCAAACTAAAGAACACCTTCTTA
TGCTCAAACAGCAAGTAGCTACCCTTCAAGCTAAAGAGAAAGAAGCTTCCAAAAGAGATTTTGAGATTGAGAAGAAACTGCAGAATCTGAAAGAATTGGATGTGGAAGTGGTTGAATTAAGGAGGACCAATAAGGAGTTGCAGCATGAAAAGCGGGAGCTAACAGTGAAACTTGATGCTGCAGAGGCACAAATTACTACC
CTTTCCAACATGACAGAGAGTGAAATGGTTATGAAGGTAAGAGAGGAGGCCAACACTTTGAGGCATGCAAATGCAGATCTATTGAAACAAGTTGAAGGACTGCAAATGAACCGGTTTAGTGAAGTGGAAGAATTGGTTTATTTGCGTTGGGTTAATGCGTGCTTGCGATATGAGCTGCGGAACTACCAAGCCCCACCTGG
TAAAGTAACTGCACGAGACCTCAGCAAGGACTTGAGCCCCAAATCACAGGAGAAGGCAAAGCAGCTTATGCTGGAATATGCAGGGCCCAATCTTTTATCTCTGCGTGAGAAAATACACACAGACACAGACTTTGATAGTGTATCCTCACAACCATCCACACCTTCCGAGAGTGACGATTTTGATGATGCATCGGTTGACA
GTACGTCTAGCAGACAGAGCAGCTCTAAAAAAACAAGTTTGATTCGGAAGCTGAAAAGGTGGGGAAGAAGTAACGATGACTCTACAACATCAAATAGTAGTTTATTTGGAGAGGAAAGAGGATATATAAGTTCACCAAGCAGAATGAAACCAGGTCACAGACATTCTATGTCAAAGACGTCATTAGAAGCTTTAATGTTA
AGAAATTCCAGTGATAAAGTTGCCATCACCTCATTTGGTATAGGGGATCAGGGATATAGCACAATGGGGCGAACAAAGTCTAGTTCTTCTATCAATTCTCATGAAACTATGTCGTGGACGGTTGATTCACCAGAAAGTGCAAATCTTCCACATATTAGAACAAGAAATCAGGAAAAGGATGATTCCTTAAACAATGTTGC
AGCATCGTTCCAACTTATGTCAAAATCTGTTGGAGGTGTGCTTGATGATAAATACCCTGCTTTTAAAGAGAGGCATAAATTGGCAATGGAAAGGGAAAAGACAATCAAAGAAAAAGCAGATCAAGCAAGGGCAGAGAAGTTTGCTGAAAAGGGAGAGGTGTCTAGTGGAAAAATTAAGATGGACAATTCAGTCAGAACAC
CCCTCCACAATTCAGTCAGAACACCCCTCCAGACAGCGAGGATAGAGAAGCCTATAGGAAAATTGGCTGTGAGACTTTCTGCAATGAATGAGCATTCAAATAACCATTCAAAGGAGCAGCCGAGTGAGATTCAAGAAATCAGCAAAATGAAGCTTGCTGGAATACAAAAAAGACCTCTACGCATTGCAAAGCCACCTCCT
AGACCGACAATTTCTTCTTCCCCTGGGTCTAATACTGTAAAAGCTACTAGTGGCATACCCATGCCCCCACCTTGTCCACCTCCTCTACCACGTGCTCCTGGTGCGCCTCCACCTCCACCACCACCTCCTGGAGGCATGCTAAAATCACAAGGACCATCAGGAGATAAAGTGCACAGGGCTCCAGAGCTTGTGGAATTCTA
TCAATCTTTGATGAAACGAGAAGCTAAGAAGGAGGCTGCTACTATGGCATCTGCAGCATCTAATGTTGGAGATGTTCGTAATAACATGATTGGAGAGATAGAAAACCGGTCTGCATTCCTCCTATCTGTCAAAGCTGATGTGGAGACCCAAGGTGATTTTGTTCAGAACTTAGCCACTGAGGTTCGAGCAAGTGCTTACA
AGAATATAGAAGATGTTGTGGCATTTGTGAACTGGTTGGATGAGGAGCTGTCTTTCTTGGTTGATGAGCGTGCAGTACTCAAACACTTCGACTGGCCTGAGAGTAAAGCTGATGCCCTGAGGGAAGCAGCCTTTGAATACCAGGATTTGAAGAAACTGGAATCATTAGTGGCTTCATTTGTTGACGATCCAAAACTCTCA
TGTTCATTTGTTGACAATCCAAAACTCTCATGTGATGCTGCATTGAAAAAAATGTATTCTCTTCTTGAAAAAGTTGAACAAAGTGTTTACGCCCTTTTGCGCACACGAGACATGGCGATTGCACGATATAAAGAGTTCAATATTCCCACAGATTGGCTGCTTGATTCTGGTGTCGTGGGCAAGATTAAACTTGCATCTGT
TCAACTTGCAAGAAAGTACATGAAACGGGTTACATCAGAGCTAGATGCTGCTTCGAATGCTCCAGATAATGAGCCGTTTAGAGAGTTCCTACTTTTGCAAGGTGTACGATTTGCATTTAGAGTTCACCAGTTTGCTGGAGGTTTTGATGCAGAGAGTATGAATGCTTTTGAGAATCTGAGGAATCGTGTACATTCACAAA
CTGAAGAAACGGATAAAATGAGTTCAACTAACTAAGGTTTCTTGCGTTCACATTTGCCTCCAATCCATAATATTGGTTTGGTCCTTATGGTGGTTGTCTTGTGGGATTTTAGAGAATTTTTCTTTGTCACAAATATGTATTTCATCTCTTTTAATTTCAAGGTGGATCTGTACCTATAGCTTGTCAGTTTTTCAACTATT
TTAGGTTAAGGGAACATTTCCTTTAAAGAAGCCATGCCCAGTAGATAGTAGGTGGTTGTACCATACTGGTGAAGTAGGATATGTAATATCAAAATCATTTGTAGAATGTTGTGCATCCATTACATATTGCACATTGAAATGTACACTGTAAATGGTAGAGGCAAGCATCTTAGGTGTTGCTTGAACTGTAGTCCACCGTT
GTAATTTTATATTGGAAATATATTGCAAAACCGCTCAATCTAGTGATTCATCTGGTTTCTCGTC
>TRINITY_DN126696_c0_g2_i6 from sample A1 / Example unspliced isoform:GCATTGGTTGGTTTGGATATCATCCTTTTCGTACACTAATTTAGTAATTTACCTTCATTGAGATTTGTTATCATCGAACCAGGCATTTTATATCTGCAACAGGACACTAAGAAATCATCCACACACAAAAGATTGCATTACCTGATTGAGGGACCTGAAATTGTGTTTCCAGTGAAGATGATTGAGTAGATGGTCGAGGA
TGAGTGGAAGGTAAAGAAAATATACATATGTTGGTGAGAGTAGTCCTCGCTGCCACTTTTTCTGCCGCAGCATACATATTTCAACATCTCAAGAACAAGCAACAGTGTTCAGACAATTCTGCAGgttgaaggatgggctttgattttctcttgtgacgcagATCTAGAACATGGAGACGAAAAGGAAGAGCAAAATGAAG
AATACAAGGAAGACTTATATGCACACAATAATGTTGATTCAATACATAAAGAGGAAGAGGAAGAAGAGGAAGTCAAAAGAGTTAACAGGGTCATGAGCCCATCTTTGAGTAGTAAGAGCTTTTCGGATGGAGAACAAATCCTCTTGCCTGAATTTGAAGATCTTTTGTCAAGCAGTTTGGAGTTCCCATCTGAAAAGGGA
AGCCTCACTGAGACAAACTTCGGGAAATCTGGCTTATCATATGAGGCTAAAATGGATAATAACTCAGTTGAACTCAATAGATTAAGGAATCTGGTGAACGAATTGGAAGAAAGGGAATTTAAGCTTGAAGGCGAATTGCTTGAGTATTATGGTATGAAAGAGCAAGAAACCAGCATAGGAGAACTACAGAGACAACTTCA
AATAAAAGTAGTGGAAATTGACATGCTCAGGATAAAAATTAATTCTTTGGAAACCCAAAAGAAGAAAATGGAAGAGGAAGTAGCTAAAGCCATGATGATGAAGAAGGAACTTGACGCATCCAGGACAAGAATTAAAGAGCTTCAGAAACAGATTCAAATTGATTCTGCGCAAACTAAAGAACACCTTCTTATGCTCAAAC
AGCAAGTAGCTACCCTTCAAGCTAAAGAGAAAGAAGCTTCCAAAAGAGATTTTGAGATTGAGAAGAAACTGCAGAATCTGAAAGAATTGGATGTGGAAGTGGTTGAATTAAGGAGGACCAATAAGGAGTTGCAGCATGAAAAGCGGGAGCTAACAGTGAAACTTGATGCTGCAGAGGCACAAATTACTACCCTTTCCAAC
ATGACAGAGAGTGAAATGGTTATGAAGGTAAGAGAGGAGGCCAACACTTTGAGGCATGCAAATGCAGATCTATTGAAACAAGTTGAAGGACTGCAAATGAACCGGTTTAGTGAAGTGGAAGAATTGGTTTATTTGCGTTGGGTTAATGCGTGCTTGCGATATGAGCTGCGGAACTACCAAGCCCCACCTGGTAAAGTAAC
TGCACGAGACCTCAGCAAGGACTTGAGCCCCAAATCACAGGAGAAGGCAAAGCAGCTTATGCTGGAATATGCAGGGCCCAATCTTTTATCTCTGCGTGAGAAAATACACACAGACACAGACTTTGATAGTGTATCCTCACAACCATCCACACCTTCCGAGAGTGACGATTTTGATGATGCATCGGTTGACAGTACGTCTA
GCAGACAGAGCAGCTCTAAAAAAACAAGTTTGATTCGGAAGCTGAAAAGGTGGGGAAGAAGTAACGATGACTCTACAACATCAAATAGTAGTTTATTTGGAGAGGAAAGAGGATATATAAGTTCACCAAGCAGAATGAAACCAGGTCACAGACATTCTATGTCAAAGACGTCATTAGAAGCTTTAATGTTAAGAAATTCC
AGTGATAAAGTTGCCATCACCTCATTTGGTATAGGGGATCAGGGATATAGCACAATGGGGCGAACAAAGTCTAGTTCTTCTATCAATTCTCATGAAACTATGTCGTGGACGGTTGATTCACCAGAAAGTGCAAATCTTCCACATATTAGAACAAGAAATCAGGAAAAGGATGATTCCTTAAACAATGTTGCAGCATCGTT
CCAACTTATGTCAAAATCTGTTGGAGGTGTGCTTGATGATAAATACCCTGCTTTTAAAGAGAGGCATAAATTGGCAATGGAAAGGGAAAAGACAATCAAAGAAAAAGCAGATCAAGCAAGGGCAGAGAAGTTTGCTGAAAAGGGAGAGGTGTCTAGTGGAAAAATTAAGATGGACAATTCAGTCAGAACACCCCTCCACA
ATTCAGTCAGAACACCCCTCCAGACAGCGAGGATAGAGAAGCCTATAGGAAAATTGGCTGTGAGACTTTCTGCAATGAATGAGCATTCAAATAACCATTCAAAGGAGCAGCCGAGTGAGATTCAAGAAATCAGCAAAATGAAGCTTGCTGGAATACAAAAAAGACCTCTACGCATTGCAAAGCCACCTCCTAGACCGACA
ATTTCTTCTTCCCCTGGGTCTAATACTGTAAAAGCTACTAGTGGCATACCCATGCCCCCACCTTGTCCACCTCCTCTACCACGTGCTCCTGGTGCGCCTCCACCTCCACCACCACCTCCTGGAGGCATGCTAAAATCACAAGGACCATCAGGAGATAAAGTGCACAGGGCTCCAGAGCTTGTGGAATTCTATCAATCTTT
GATGAAACGAGAAGCTAAGAAGGAGGCTGCTACTATGGCATCTGCAGCATCTAATGTTGGAGATGTTCGTAATAACATGATTGGAGAGATAGAAAACCGGTCTGCATTCCTCCTATCTGTCAAAGCTGATGTGGAGACCCAAGGTGATTTTGTTCAGAACTTAGCCACTGAGGTTCGAGCAAGTGCTTACAAGAATATAG
AAGATGTTGTGGCATTTGTGAACTGGTTGGATGAGGAGCTGTCTTTCTTGGTTGATGAGCGTGCAGTACTCAAACACTTCGACTGGCCTGAGAGTAAAGCTGATGCCCTGAGGGAAGCAGCCTTTGAATACCAGGATTTGAAGAAACTGGAATCATTAGTGGCTTCATTTGTTGACGATCCAAAACTCTCATGTTCATTT
GTTGACAATCCAAAACTCTCATGTGATGCTGCATTGAAAAAAATGTATTCTCTTCTTGAAAAAGTTGAACAAAGTGTTTACGCCCTTTTGCGCACACGAGACATGGCGATTGCACGATATAAAGAGTTCAATATTCCCACAGATTGGCTGCTTGATTCTGGTGTCGTGGGCAAGATTAAACTTGCATCTGTTCAACTTGC
AAGAAAGTACATGAAACGGGTTACATCAGAGCTAGATGCTGCTTCGAATGCTCCAGATAATGAGCCGTTTAGAGAGTTCCTACTTTTGCAAGGTGTACGATTTGCATTTAGAGTTCACCAGTTTGCTGGAGGTTTTGATGCAGAGAGTATGAATGCTTTTGAGAATCTGAGGAATCGTGTACATTCACAAACTGAAGAAA
CGGATAAAATGAGTTCAACTAACTAAGGTTTCTTGCGTTCACATTTGCCTCCAATCCATAATATTGGTTTGGTCCTTATGGTGGTTGTCTTGTGGGATTTTAGAGAATTTTTCTTTGTCACAAATATGTATTTCATCTCTTTTAATTTCAAGGTGGATCTGTACCTATAGCTTGTCAGTTTTTCAACTATTTTAGGTTAA
GGGAACATTTCCTTTAAAGAAGCCATGCCCAGTAGATAGTAGGTGGTTGTACCATACTGGTGAAGTAGGATATGTAATATCAAAATCATTTGTAGAATGTTGTGCATCCATTACATATTGCACATTGAAATGTACACTGTAAATGGTAGAGGCAAGCATCTTAGGTGTTGCTTGAACTGTAGTCCACCGTTGTAATTTTA
TATTGGAAATATATTGCAAAACCGCTCAATCTAGTGATTCATCTGGTTTCTCGTC