sp|Q3E6Q1|PPR32_ARATH ----> Pentatricopeptide repeat-containing protein At1g11290, chloroplastic
Intron 1 GTAAGGAAGT ... CTGCTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 60.98 | 8 | 15 | 10 |
| A2 | 44.44 | 5 | 5 | 3 |
| A3 | 38.46 | 12 | 8 | 7 |
| A4 | 23.08 | 15 | 7 | 2 |
| A5 | 14.29 | 6 | 2 | 0 |
| A6 | 25 | 21 | 6 | 8 |
| A7 | 41.28 | 32 | 20 | 25 |
| A8 | 45 | 11 | 8 | 10 |
| A9 | 57.3 | 19 | 31 | 20 |
| A10 | 36.84 | 24 | 12 | 16 |
>TRINITY_DN121201_c5_g1_i2 from sample A1 / Example spliced isoformTTTCTAAAAATGAACGACCGTGAGCGCAACTCCGTCCATGTATCAAGGAAGCTAAATTTTATTCAGCCATGAATATTTGATTTCGCTGGCGTTCTGCTAAAATGAGAAAATAGAATCCCTGCATACAATGAAATTTACATCGAATAATGAAAATGAAACCTACATCGAATAATGAAACCTATTTTGCAAGATGTCCCACT
TACTGAAGTTCTAAGGTCGTGCGCTCGCCTATCCGATCTCAAATTGGGCAAGAAGATTCACGCCTCTATAATTCGAAGAGGACTCGAGCGTAATTTGGTTTTAAGCAACACCCTCGTTGACATGTATGCAAAATGCCGAAGAATAGAGAGTGCACGCGACGTGTTTGACGGAATGTGTGAAAGGAATGTCGTTTCCTGGA
CTGCACTCATTGCAGGCTACACTCAGCAGGGCCTTGCCGAGGAAGCTTTGCTACTGTTTCGGAAAATGGTACGTGATTCTGTGAAGCCTAATCAGTTCACCTTCTCCACAATTCTCAGAGCTTGTGCTAGTTTAGCAGGCAAGGAACAGGGCAAACAGATTCATGCCATCATAATTCCAAGTGGCTTTGAATCCCATATT
GTAGTATGTAATGCAATTATAGATATGTATGCTAAATGTGGGCAGATTGATGATGCACGTCAAGTGTTTGACAAAATGTCTGAAAGAGATGTCATTTCGTGGAACTCCTTGGTTGCAGGATATGTGCAGCATTCCAATGCGAATGCGGCGCTGATCCTTTTTTATGAGATGCAGCGGCAGGAAATGAAGCCAGATGAGTT
CACTTTCGCTGGTATCTTAAGTGCATGCGTGGTTCTGGTAGCCCCGATTCAGGGCAGGCAAGTACATGCCAAAATAATTAAAAATGGGTCCGGCTCACATGTTGTTTTGGGTAGTGCTCTTGTGGATCTGTATGCCAAGTGCAGAGGTTTGGAAGAGGCTCGCCAAGTGTTTGATGAAATGCCGCGACGGAATGCAGTAT
CATGGACTACGATGATCGCAGGATATGCGCAGCAGGGTAATGGGGAGGAGGCATTGTTATTCTTTTATCAAATGCAGCAGGAAGGAATTGAACTAGATGAATTCATACTTGCCACTATTTTGGGAGTATTTGCTGGCCTAGCTGGTCTGGAACAGGGCAAACAAATTCATGGGAAGATAATTAGAAGCACCTGCAATTTC
AGTGTAACTCTGGGGAATTCCCTCATTAACATGTACATGAAATGTGGCAGGATAGAGGAAGCGGGCCTGGTATTTGATTGGATGGCGGAGCGAAATGTGATATCCTGGACTTCAATTATAGCAGGATATGGAAATCATGGGCATGTCATGCAGGTCTAGTGAAAGAAGGCTGGCATTATTTCAATTCAATGATTCACCAC
CACTGCATTGAACCGAAGGCAGAACACTATGCCTGCATGGTAGACCTGCTGGGCCGGGCTGGGCAATTAGACGAGGCAGTGACGTTCATCAAAGAAATGCCATGTGAACCCAATGTCGCTGTTTGGGAGGCTCTACTTAGTGCCTGCCGAATTCATCACAATATGGAGCTAGGGAAACTTGCAGCAGAAAATGTTTTTAA
GCTAAATCCGGAAAATCCTTCAAGTTATGTGCTGCTATCAAACATCCATGCTGCAGCTGGTAGATGGAGAGAGGTGTCGAATTTGAGAAAATTGATGACGGAAAGGGGATTGAAGAAAGAGCCGGGTTGTAGCTGGATAGAGGTCAGAAAGAAGGTGTATGTATTTCTTGTAGGGGACAGGTCACACTCCCAAACTGAAG
AAATGTATGCAATGCTGGATGGATTAGCTGGGAAGATGAAAGAAGCAGGGTATATGCCTGACACAAATTTTGTGCTACATGATCTAGAGGAAGAACAAAAAGAATGCGTCCTTAGGCACCATAGTGAGAAGCTGGCCATTGGATTTGGGCTCATTAATACACCTCAAGGGACGTCTGTCAAAGTTTTCAAGAATCTTCGT
GTCTGTGGTGACTGCCACACTTACATCAAATTCATATCCACTATCACAGGGCGAGAAATCATTGTAAGAGATGCCAATCGCTTTCACCATTTCAAGGATGGTATTTGTTCTTGTGGAGATTACTGGTAATTCGTTTCTATGTTTTGTTCATCCTTGCATGACGTGTTAAAGATGTTCATAATGCGTATCTCATAGTGTTT
GGGCAGTAGGTCCATGCCCGTAGTATAATAATTTTGAGTGGAACTGTCACTTGCAAAGCTTTGGATATGAGTGAACAGACCAGGCGAAATGCTATGAAATATGATATTTTATACTGATGTCATCTGCATCGTATGGGAAAAAAAATTCAATCCGTGTAGCATTGAAGAGTCCCTGTTGTCACAGGCATTGACTTTCTACT
TGTATTATCCGTGATTTCTCTACATGTTAACTATTTCCAACTTCTACAGCGGATTGTAGAATCTTTGGCAACCTACGCTTGAGTGATTGTGATTGTTACAACTTACATGGATCCTCCTCAATAATTAAGGTACT
>TRINITY_DN121201_c5_g1_i4 from sample A1 / Example unspliced isoform:TTTCTAAAAATGAACGACCGTGAGCGCAACTCCGTCCATGTATCAAGGAAGCTAAATTTTATTCAGCCATGAATATTTGATTTCGCTGGCGTTCTGCTAAAATGAGAAAATAGAATCCCTGCATACAATGAAATTTACATCGAATAATGAAAATGAAACCTACATCGAATAATGAAACCTATTTTGCAAGATGTCCCACT
TACTGAAGTTCTAAGGTCGTGCGCTCGCCTATCCGATCTCAAATTGGGCAAGAAGATTCACGCCTCTATAATTCGAAGAGGACTCGAGCGTAATTTGGTTTTAAGCAACACCCTCGTTGACATGTATGCAAAATGCCGAAGAATAGAGAGTGCACGCGACGTGTTTGACGGAATGTGTGAAAGGAATGTCGTTTCCTGGA
CTGCACTCATTGCAGGCTACACTCAGCAGGGCCTTGCCGAGGAAGCTTTGCTACTGTTTCGGAAAATGGATATGTGCAGCATTCCAATGCGAATGCGGCGCTGATCCTTTTTTATGAGATGCAGCGGCAGGAAATGAAGCCAGATGAGTTCACTTTCGCTGGTATCTTAAGTGCATGCGTGGTTCTGGTAGCCCCGATTC
AGGGCAGGCAAGTACATGCCAAAATAATTAAAAATGGGTCCGGCTCACATGTTGTTTTGGGTAGTGCTCTTGTGGATCTGTATGCCAAGTGCAGAGGTTTGGAAGAGGCTCGCCAAGTGTTTGATGAAATGCCGCGACGGAATGCAGTATCATGGACTACGATGATCGCAGGATATGCGCAGCAGGGTAATGGGGAGGAG
GCATTGTTATTCTTTTATCAAATGCAGCAGGAAGGAATTGAACTAGATGAATTCATACTTGCCACTATTTTGGGAGTATTTGCTGGCCTAGCTGGTCTGGAACAGGGCAAACAAATTCATGGGAAGATAATTAGAAGCACCTGCAATTTCAGTGTAACTCTGGGGAATTCCCTCATTAACATGTACATGAAATGTGGCAG
GATAGAGGAAGCGGGCCTGGTATTTGATTGGATGGCGGAGCGAAATGTGATATCCTGGACTTCAATTATAGCAGGATATGGAAATCATGGGCATGgtaaggaagttatccatcttttcgaacaaatgcaattgtcaggcataaagccggaccacgtcacattcttgactattctttctgcttgcagTCATGCAGGTCTAG
TGAAAGAAGGCTGGCATTATTTCAATTCAATGATTCACCACCACTGCATTGAACCGAAGGCAGAACACTATGCCTGCATGGTAGACCTGCTGGGCCGGGCTGGGCAATTAGACGAGGCAGTGACGTTCATCAAAGAAATGCCATGTGAACCCAATGTCGCTGTTTGGGAGGCTCTACTTAGTGCCTGCCGAATTCATCAC
AATATGGAGCTAGGGAAACTTGCAGCAGAAAATGTTTTTAAGCTAAATCCGGAAAATCCTTCAAGTTATGTGCTGCTATCAAACATCCATGCTGCAGCTGGTAGATGGAGAGAGGTGTCGAATTTGAGAAAATTGATGACGGAAAGGGGATTGAAGAAAGAGCCGGGTTGTAGCTGGATAGAGGTCAGAAAGAAGGTGTA
TGTATTTCTTGTAGGGGACAGGTCACACTCCCAAACTGAAGAAATGTATGCAATGCTGGATGGATTAGCTGGGAAGATGAAAGAAGCAGGGTATATGCCTGACACAAATTTTGTGCTACATGATCTAGAGGAAGAACAAAAAGAATGCGTCCTTAGGCACCATAGTGAGAAGCTGGCCATTGGATTTGGGCTCATTAATA
CACCTCAAGGGACGTCTGTCAAAGTTTTCAAGAATCTTCGTGTCTGTGGTGACTGCCACACTTACATCAAATTCATATCCACTATCACAGGGCGAGAAATCATTGTAAGAGATGCCAATCGCTTTCACCATTTCAAGGATGGTATTTGTTCTTGTGGAGATTACTGGTAATTCGTTTCTATGTTTTGTTCATCCTTGCAT
GACGTGTTAAAGATGTTCATAATGCGTATCTCATAGTGTTTGGGCAGTAGGTCCATGCCCGTAGTATAATAATTTTGAGTGGAACTGTCACTTGCAAAGCTTTGGATATGAGTGAACAGACCAGGCGAAATGCTATGAAATATGATATTTTATACTGATGTCATCTGCATCGTATGGGAAAAAAAATTCAATCCGTGTAG
CATTGAAGAGTCCCTGTTGTCACAGGCATTGACTTTCTACTTGTATTATCCGTGATTTCTCTACATGTTAACTATTTCCAACTTCTACAGCGGATTGTAGAATCTTTGGCAACCTACGCTTGAGTGATTGTGATTGTTACAACTTACATGGATCCTCCTCAATAATTAAGGTACT
Intron 2 ATCGAATAAT ... TGAAACCTAC
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 44.83 | 8 | 8 | 5 |
| A2 | 48.57 | 9 | 8 | 9 |
| A3 | 46.15 | 7 | 8 | 4 |
| A4 | 40 | 6 | 6 | 2 |
| A5 | 40 | 3 | 3 | 1 |
| A6 | 33.33 | 1 | 0 | 1 |
| A7 | 41.54 | 19 | 15 | 12 |
| A8 | 42.86 | 2 | 2 | 1 |
| A9 | 37.7 | 19 | 11 | 12 |
| A10 | 50 | 8 | 8 | 8 |
>TRINITY_DN45592_c4_g2_i4 from sample A7 / Example spliced isoformGAAGCCCACATCCGTAATAGGGATACAAGAATCAGAGAGCAGTCCTGGAGTCATAGTCTCCACATCTTCAACCCCAACATCGACCTAGGTCTCTAAACAGCCTTTTTAACCCAGATCTTACTGGGCTTGGACGGTCTTTGCAATCATGCCTCAGGTGTTCAACTTTGTAGCAGGCTGAGCAGCAGTCCAAGTCCAAATCC
CTTGAGAATCCGGCTATACAATCTGCAATTAAATTGCAAATTTTCATTACTAAAATGGCATGTTTAAACTATTGCATTTCACAATCTAAACTAATTTTGATTTTGATTTTGCTCTAATAATATGTACATGGTCCGCACTTGAATCTCTGTTGTGCTCTCACCATTTCGAAAAATGAACGGCCGTGAGCGCAACTCCGTCC
ATGTATCAAGGAAGCTAAATTTTATTCAGCCATGAATATTTGATTTCGCTGGCGTTCTGCTAAAATGAGAAAATAGAATCCCTGCATACAATGAAATTTACATCGAATAATGAAACCTATTTTGCAAGATGTCCCACTTACTGAAGTTCTAAGGTCGTGCGCTCGCCTATCCGATCTCAAATTGGGCAAGAAGATTCACG
CCTCTATAATTCGAAGAGGACTCGAGCGTAATTTGGTTTTAAGCAACACCCTCGTTGACATGTATGCAAAATGCCGAAGAATAGAGAGTGCACGCGACGTGTTTGACGGAATGTGTGAAAGGAATGTCGTTTCCTGGACTGCACTCATTGCAGGCTACACTCAGCAGGGCCTTGCCGAGGAAGCTTTGCTACTGTTTCGG
AAAATGGATATGTGCAGCATTCCAATGCGAATGCGGCGCTGATCCTTTTTTATGAGATGCAGCGGCAGGAAATGAAGCCAGATGAGTTCACTTTCGCTGGTATCTTAAGTGCATGCGTGGTTCTGGTAGCCCCGATTCAGGGCAGGCAAGTACATGCCAAAATAATTAAAAATGGGTCCGGCTCACATGTTGTTTTGGGT
AGTGCTCTTGTGGATCTGTATGCCAAGTGCAGAGGTTTGGAAGAGGCTCGCCAAGTGTTTGATGAAATGCCGCGACGGAATGCAGTATCATGGACTACGATGATCGCAGGATATGCGCAGCAGGGTAATGGGGAGGAGGCATTGTTATTCTTTTATCAAATGCAGCAGGAAGGAATTGAACTAGATGAATTCATACTTGC
CACTATTTTGGGAGTATTTGCTGGCCTAGCTGGTCTGGAACAGGGCAAACAAATTCATGGGAAGATAATTAGAAGCACCTGCAATTTCAGTGTAACTCTGGGGAATTCCCTCATTAACATGTACATGAAATGTGGCAGGATAGAGGAAGCGGGCCTGGTATTTGATTGGATGGCGGAGCGAAATGTGATATCCTGGACTT
CAATTATAGCAGGATATGGAAATCATGGGCATGGTAAGGAAGTTATCCATCTTTTCGAACAAATGCAATTGTCAGGCATAAAGCCGGACCACGTCACATTCTTGACTATTCTTTCTGCTTGCAGTCATGCAGGTCTAGTGAAAGAAGGCTGGCATTATTTCAATTCAATGATTCACCACCACTGCATTGAACCGAAGGCA
GAACACTATGCCTGCATGGTAGACCTGCTGGGCCGGGCTGGGCAATTAGACGAGGCAGTGACGTTCATCAAAGAAATGCCATGTGAACCCAATGTCGCTGTTTGGGAGGCTCTACTTAGTGCCTGCCGAATTCATCACAATATGGAGCTAGGGAAACTTGCAGCAGAAAATGTTTTTAAGCTAAATCCGGAAAATCCTTC
AAGTTATGTGCTGCTATCAAACATCCATGCTGCAGCTGGTAGATGGAGAGAGGTGTCGAATTTGAGAAAATTGATGACGGAAAGGGGATTGAAGAAAGAGCCGGGTTGTAGCTGGATAGAGGTCAGAAAGAAGGTGTATGTATTTCTTGTAGGGGACAGGTCACACTCCCAAACTGAAGAAATGTATGCAATGCTGGATG
GATTAGCTGGGAAGATGAAAGAAGCAGGGTATATGCCTGACACAAATTTTGTGCTACATGATCTAGAGGAAGAACAAAAAGAATGCGTCCTTAGGCACCATAGTGAGAAGCTGGCCATTGGATTTGGGCTCATTAATACACCTCAAGGGACGTCTGTCAAAGTTTTCAAGAATCTTCGTGTCTGTGGTGACTGCCACACT
TACATCAAATTCATATCCACTATCACAGGGCGAGAAATCATTGTAAGAGATGCC
>TRINITY_DN45592_c4_g2_i2 from sample A7 / Example unspliced isoform:GAAGCCCACATCCGTAATAGGGATACAAGAATCAGAGAGCAGTCCTGGAGTCATAGTCTCCACATCTTCAACCCCAACATCGACCTAGGTCTCTAAACAGCCTTTTTAACCTAGATCTTACTGGGCTTGGATGGTTTTTGCAATCATGCCTCAGGTGTTCAACTTTGTAGCAGGCTGAGCAGCAGTCCAAGTCCAAATCC
CTTGAGAATCCGGCTATACAATCTGCAATTAAATTGCAAATTTTCATTACTAAAATGGCATGTTTAAACTATTGCATTTCGCAATCTGAACTAATTTTGATTTTGCTCTAATAATATGTACATGGTGGGCACTTGAATCTCTGTTGTGCTCTCACCATTTCGAAAAATGAACGGCCGTGAGCGCAACTCCGTCCATGTAT
CAAGGAAGCTAAATTTTATTCAGCCATGAATATTTGATTTCGCTGGCGTTCTGCTAAAATGAGAAAATAGAATCCCTGCATACAATGAAATTTACatcgaataatgaaaatgaaacctacATCGAATAATGAAACCTATTTTGCAAGATGTCCCACTTACTGAAGTTCTAAGGTCGTGCGCTCGCCTATCCGATCTCAAA
TTGGGCAAGAAGATTCACGCCTCTATAATTCGAAGAGGACTCGAGCGTAATTTGGTTTTAAGCAACACCCTCGTCGATATGTATGCAAAATGCCGAAGAATAAAGCGTGCACGCGACGTGTTTGACGGAATGTGTGAAAGGAATGTCGTTTCCTGGACTGCACTCATTGCAGGCTACACTCAGCAGGGCCTTGCCGAGGA
AGCTTTGCTACTGTTTCGGAAAATGGTACGTGATTCTGTGAAGCCTAATCAGTTCACCTTCTCCACAATTCTCAGAGCTTGTGCTAGTTTAGCAGGCAAGGAACAGGGCAAACAGATTCATGCCATCATAATTCCAAGTGGCTTTGAATCCCATATTGTAGTATGTAATGCAATTATAGATATGTATGCTAAATGTGGGC
AGATTGATGATGCACGTCAAGTGTTTGACAAAATGTCTGAAAGAGATGTCATTTCGTGGAACTCCTTGGTTGCAGGATATGTGCAGCATTCCAATGCGAATGCGGCGCTGATCCTTTTTTATGAGATGCAGCGGCAGGAAATGAAGCCAGATGAGTTCACTTTCGCTGGTATCTTAAGTGCATGCGTGGTTCTGGTAGCC
CCGATTCAGGGCAGGCAAGTACATGCCAAAATAATTAAAAATGGGTCCGGCTCACATGTTGTTTTGGGTAGTGCTCTTGTGGATCTGTATGCCAAGTGCAGAGGTTTGGAAGAGGCTCGCCAAGTGTTTGATGAAATGCCGCGACGGAATGCAGTATCATGGACTACGATGATCGCAGGATATGCGCAGCAGGGTAATGG
GGAGGAGGCATTGTTATTCTTTTATCAAATGCAGCAGGAAGGAATTGAACTAGATGAATTCATACTTGCCACTATTTTGGGAGTATTTGCTGGCCTAGCTGGTCTGGAACAGGGCAAACAAATTCATGGGAAGATAATTAGAAGCACCTGCAATTTCAGTGTAACTCTGGGGAATTCCCTCATTAACATGTACATGAAAT
GTGGCAGGATAGAGGAAGCGGGCCTGGTATTTGATTGGATGGCGGAGCGAAATGTGATATCCTGGACTTCAATTATAGCAGGATATGGAAATCATGGGCATGTCATGCAGGTCTAGTGAAAGAAGGCTGGCATTATTTCAATTCAATGATTCACCACCACTGCATTGAACCGAAGGCAGAACACTATGCCTGCATGGTAG
ACCTGCTGGGCCGGGCTGGGCAATTAGACGAGGCAGTGACGTTCATCAAAGAAATGCCATGTGAACCCAATGTCGCTGTTTGGGAGGCTCTACTTAGTGCCTGCCGAATTCATCACAATATGGAGCTAGGGAAACTTGCAGCAGAAAATGTTTTTAAGCTAAATCCGGAAAATCCTTCAAGTTATGTGCTGCTATCAAAC
ATCCATGCTGCAGCTGGTAGATGGAGAGAGGTGTCGAATTTGAGAAAATTGATGACGGAAAGGGGATTGAAGAAAGAGCCGGGTTGTAGCTGGATAGAGGTCAGAAAGAAGGTGTATGTATTTCTTGTAGGGGACAGGTCACACTCCCAAACTGAAGAAATGTATGCAATGCTGGATGGATTAGCTGGGAAGATGAAAGA
AGCAGGGTATATGCCTGACACAAATTTTGTGCTACATGATCTAGAGGAAGAACAAAAAGAATGCGTCCTTAGGCACCATAGTGAGAAGCTGGCCATTGGATTTGGGCTCATTAATACACCTCAAGGGACGTCTGTCAAAGTTTTCAAGAATCTTCGTGTCTGTGGTGACTGCCACACTTACATCAAATTCATATCCACTA
TCACAGGGCGAGAAATCATTGTAAGAGATGCC
Intron 3 GTACGTGATT ... TTGGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 39.58 | 29 | 26 | 12 |
| A2 | 47.37 | 10 | 16 | 2 |
| A3 | 58.33 | 5 | 9 | 5 |
| A4 | 48.72 | 10 | 11 | 8 |
| A5 | 44.44 | 5 | 6 | 2 |
| A6 | 42.86 | 6 | 4 | 5 |
| A7 | 49.37 | 20 | 25 | 14 |
| A8 | 52 | 6 | 9 | 4 |
| A9 | 71.43 | 8 | 27 | 13 |
| A10 | 35.9 | 25 | 19 | 9 |
>TRINITY_DN121201_c5_g1_i4 from sample A1 / Example spliced isoformTTTCTAAAAATGAACGACCGTGAGCGCAACTCCGTCCATGTATCAAGGAAGCTAAATTTTATTCAGCCATGAATATTTGATTTCGCTGGCGTTCTGCTAAAATGAGAAAATAGAATCCCTGCATACAATGAAATTTACATCGAATAATGAAAATGAAACCTACATCGAATAATGAAACCTATTTTGCAAGATGTCCCACT
TACTGAAGTTCTAAGGTCGTGCGCTCGCCTATCCGATCTCAAATTGGGCAAGAAGATTCACGCCTCTATAATTCGAAGAGGACTCGAGCGTAATTTGGTTTTAAGCAACACCCTCGTTGACATGTATGCAAAATGCCGAAGAATAGAGAGTGCACGCGACGTGTTTGACGGAATGTGTGAAAGGAATGTCGTTTCCTGGA
CTGCACTCATTGCAGGCTACACTCAGCAGGGCCTTGCCGAGGAAGCTTTGCTACTGTTTCGGAAAATGGATATGTGCAGCATTCCAATGCGAATGCGGCGCTGATCCTTTTTTATGAGATGCAGCGGCAGGAAATGAAGCCAGATGAGTTCACTTTCGCTGGTATCTTAAGTGCATGCGTGGTTCTGGTAGCCCCGATTC
AGGGCAGGCAAGTACATGCCAAAATAATTAAAAATGGGTCCGGCTCACATGTTGTTTTGGGTAGTGCTCTTGTGGATCTGTATGCCAAGTGCAGAGGTTTGGAAGAGGCTCGCCAAGTGTTTGATGAAATGCCGCGACGGAATGCAGTATCATGGACTACGATGATCGCAGGATATGCGCAGCAGGGTAATGGGGAGGAG
GCATTGTTATTCTTTTATCAAATGCAGCAGGAAGGAATTGAACTAGATGAATTCATACTTGCCACTATTTTGGGAGTATTTGCTGGCCTAGCTGGTCTGGAACAGGGCAAACAAATTCATGGGAAGATAATTAGAAGCACCTGCAATTTCAGTGTAACTCTGGGGAATTCCCTCATTAACATGTACATGAAATGTGGCAG
GATAGAGGAAGCGGGCCTGGTATTTGATTGGATGGCGGAGCGAAATGTGATATCCTGGACTTCAATTATAGCAGGATATGGAAATCATGGGCATGGTAAGGAAGTTATCCATCTTTTCGAACAAATGCAATTGTCAGGCATAAAGCCGGACCACGTCACATTCTTGACTATTCTTTCTGCTTGCAGTCATGCAGGTCTAG
TGAAAGAAGGCTGGCATTATTTCAATTCAATGATTCACCACCACTGCATTGAACCGAAGGCAGAACACTATGCCTGCATGGTAGACCTGCTGGGCCGGGCTGGGCAATTAGACGAGGCAGTGACGTTCATCAAAGAAATGCCATGTGAACCCAATGTCGCTGTTTGGGAGGCTCTACTTAGTGCCTGCCGAATTCATCAC
AATATGGAGCTAGGGAAACTTGCAGCAGAAAATGTTTTTAAGCTAAATCCGGAAAATCCTTCAAGTTATGTGCTGCTATCAAACATCCATGCTGCAGCTGGTAGATGGAGAGAGGTGTCGAATTTGAGAAAATTGATGACGGAAAGGGGATTGAAGAAAGAGCCGGGTTGTAGCTGGATAGAGGTCAGAAAGAAGGTGTA
TGTATTTCTTGTAGGGGACAGGTCACACTCCCAAACTGAAGAAATGTATGCAATGCTGGATGGATTAGCTGGGAAGATGAAAGAAGCAGGGTATATGCCTGACACAAATTTTGTGCTACATGATCTAGAGGAAGAACAAAAAGAATGCGTCCTTAGGCACCATAGTGAGAAGCTGGCCATTGGATTTGGGCTCATTAATA
CACCTCAAGGGACGTCTGTCAAAGTTTTCAAGAATCTTCGTGTCTGTGGTGACTGCCACACTTACATCAAATTCATATCCACTATCACAGGGCGAGAAATCATTGTAAGAGATGCCAATCGCTTTCACCATTTCAAGGATGGTATTTGTTCTTGTGGAGATTACTGGTAATTCGTTTCTATGTTTTGTTCATCCTTGCAT
GACGTGTTAAAGATGTTCATAATGCGTATCTCATAGTGTTTGGGCAGTAGGTCCATGCCCGTAGTATAATAATTTTGAGTGGAACTGTCACTTGCAAAGCTTTGGATATGAGTGAACAGACCAGGCGAAATGCTATGAAATATGATATTTTATACTGATGTCATCTGCATCGTATGGGAAAAAAAATTCAATCCGTGTAG
CATTGAAGAGTCCCTGTTGTCACAGGCATTGACTTTCTACTTGTATTATCCGTGATTTCTCTACATGTTAACTATTTCCAACTTCTACAGCGGATTGTAGAATCTTTGGCAACCTACGCTTGAGTGATTGTGATTGTTACAACTTACATGGATCCTCCTCAATAATTAAGGTACT
>TRINITY_DN121201_c5_g1_i1 from sample A1 / Example unspliced isoform:TTTCTAAAAATGAACGACCGTGAGCGCAACTCCGTCCATGTATCAAGGAAGCTAAATTTTATTCAGCCATGAATATTTGATTTCGCTGGCGTTCTGCTAAAATGAGAAAATAGAATCCCTGCATACAATGAAATTTACATCGAATAATGAAAATGAAACCTACATCGAATAATGAAACCTATTTTGCAAGATGTCCCACT
TACTGAAGTTCTAAGGTCGTGCGCTCGCCTATCCGATCTCAAATTGGGCAAGAAGATTCACGCCTCTATAATTCGAAGAGGACTCGAGCGTAATTTGGTTTTAAGCAACACCCTCGTTGACATGTATGCAAAATGCCGAAGAATAGAGAGTGCACGCGACGTGTTTGACGGAATGTGTGAAAGGAATGTCGTTTCCTGGA
CTGCACTCATTGCAGGCTACACTCAGCAGGGCCTTGCCGAGGAAGCTTTGCTACTGTTTCGGAAAATGgtacgtgattctgtgaagcctaatcagttcaccttctccacaattctcagagcttgtgctagtttagcaggcaaggaacagggcaaacagattcatgccatcataattccaagtggctttgaatcccatatt
gtagtatgtaatgcaattatagatatgtatgctaaatgtgggcagattgatgatgcacgtcaagtgtttgacaaaatgtctgaaagagatgtcatttcgtggaactccttggttgcagGATATGTGCAGCATTCCAATGCGAATGCGGCGCTGATCCTTTTTTATGAGATGCAGCGGCAGGAAATGAAGCCAGATGAGTT
CACTTTCGCTGGTATCTTAAGTGCATGCGTGGTTCTGGTAGCCCCGATTCAGGGCAGGCAAGTACATGCCAAAATAATTAAAAATGGGTCCGGCTCACATGTTGTTTTGGGTAGTGCTCTTGTGGATCTGTATGCCAAGTGCAGAGGTTTGGAAGAGGCTCGCCAAGTGTTTGATGAAATGCCGCGACGGAATGCAGTAT
CATGGACTACGATGATCGCAGGATATGCGCAGCAGGGTAATGGGGAGGAGGCATTGTTATTCTTTTATCAAATGCAGCAGGAAGGAATTGAACTAGATGAATTCATACTTGCCACTATTTTGGGAGTATTTGCTGGCCTAGCTGGTCTGGAACAGGGCAAACAAATTCATGGGAAGATAATTAGAAGCACCTGCAATTTC
AGTGTAACTCTGGGGAATTCCCTCATTAACATGTACATGAAATGTGGCAGGATAGAGGAAGCGGGCCTGGTATTTGATTGGATGGCGGAGCGAAATGTGATATCCTGGACTTCAATTATAGCAGGATATGGAAATCATGGGCATGGTAAGGAAGTTATCCATCTTTTCGAACAAATGCAATTGTCAGGCATAAAGCCGGA
CCACGTCACATTCTTGACTATTCTTTCTGCTTGCAGTCATGCAGGTCTAGTGAAAGAAGGCTGGCATTATTTCAATTCAATGATTCACCACCACTGCATTGAACCGAAGGCAGAACACTATGCCTGCATGGTAGACCTGCTGGGCCGGGCTGGGCAATTAGACGAGGCAGTGACGTTCATCAAAGAAATGCCATGTGAAC
CCAATGTCGCTGTTTGGGAGGCTCTACTTAGTGCCTGCCGAATTCATCACAATATGGAGCTAGGGAAACTTGCAGCAGAAAATGTTTTTAAGCTAAATCCGGAAAATCCTTCAAGTTATGTGCTGCTATCAAACATCCATGCTGCAGCTGGTAGATGGAGAGAGGTGTCGAATTTGAGAAAATTGATGACGGAAAGGGGA
TTGAAGAAAGAGCCGGGTTGTAGCTGGATAGAGGTCAGAAAGAAGGTGTATGTATTTCTTGTAGGGGACAGGTCACACTCCCAAACTGAAGAAATGTATGCAATGCTGGATGGATTAGCTGGGAAGATGAAAGAAGCAGGGTATATGCCTGACACAAATTTTGTGCTACATGATCTAGAGGAAGAACAAAAAGAATGCGT
CCTTAGGCACCATAGTGAGAAGCTGGCCATTGGATTTGGGCTCATTAATACACCTCAAGGGACGTCTGTCAAAGTTTTCAAGAATCTTCGTGTCTGTGGTGACTGCCACACTTACATCAAATTCATATCCACTATCACAGGGCGAGAAATCATTGTAAGAGATGCCAATCGCTTTCACCATTTCAAGGATGGTATTTGTT
CTTGTGGAGATTACTGGTAATTCGTTTCTATGTTTTGTTCATCCTTGCATGACGTGTTAAAGATGTTCATAATGCGTATCTCATAGTGTTTGGGCAGTAGGTCCATGCCCGTAGTATAATAATTTTGAGTGGAACTGTCACTTGCAAAGCTTTGGATATGAGTGAACAGACCAGGCGAAATGCTATGAAATATGATATTT
TATACTGATGTCATCTGCATCGTATGGGAAAAAAAATTCAATCCGTGTAGCATTGAAGAGTCCCTGTTGTCACAGGCATTGACTTTCTACTTGTATTATCCGTGATTTCTCTACATGTTAACTATTTCCAACTTCTACAGCGGATTGTAGAATCTTTGGCAACCTACGCTTGAGTGATTGTGATTGTTACAACTTACATG
GATCCTCCTCAATAATTAAGGTACT