NA ----> NA
Intron 1 GTGGAGGACC ... CATATGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 25.93 | 10 | 2 | 5 |
| A2 | 19.35 | 25 | 6 | 6 |
| A3 | 37.14 | 11 | 6 | 7 |
| A4 | 29.41 | 12 | 8 | 2 |
| A5 | 20 | 4 | 1 | 1 |
| A6 | 10.53 | 17 | 1 | 3 |
| A7 | 31.51 | 25 | 9 | 14 |
| A8 | 20 | 20 | 6 | 4 |
| A9 | 27.27 | 20 | 3 | 12 |
| A10 | 36.59 | 13 | 13 | 2 |
>TRINITY_DN116592_c0_g1_i7 from sample A1 / Example spliced isoformGGGAGAAGTGTTTTGCGTCACCTAGATTACATCACAAGTGAAAAACCCTACAAAGGCATGTCACCGAAAACATCTGAATGTATCGGGAGTTCGGATCGGTCTATCGGCAGCGCACACTGATAAAGCTCGGGTTTAATAAGGTTATGTGGACCTTTACCCTGCAAAGAATAAAGCCACGATCCTTGCTCCCATATCTTTGA
TTCCGCTCCGACCAAAAACCATTCATGTCACTTTGCTGTCTATATATTATATAGAGTGAGAGAGGCAAATTGTTCGTGCATACTGATGAAACAATGATCCGAACTTCAAAATCCTTTTCGGCTATACTATATGGACAATCTCCATACACTATCATTAAACCCTTTTGCGGAAAGTGCAAATCTATGCCAGCAAAATCCGA
AAAACCCTCCTTAAAACCCATTTTGTTTTAAAATTCCGCGGATGGACTCCACAGCACAGGTGTATATGTTTTGGGACTGAGCAGATAGATTCCACACTACAGGTGGATTGTTGCCAATTCAGATACCCAAAACTCTATTCTTGGAAGGTGTTCATCCAAAACAAACAGACATAACGTGAATATTATTCAAGCATCTGTGT
ATTTTTTTTGATACAATGGATACCCAATTCATCAAGTCCGAAGCAGAATATGACGATTAGTACTATTATTCTCTAGGTGCTTCTTCACAATCTCAAGCATTCATGGGGAATTCTGGGAATGGATACATAGAAGGAGAGGAAGCCCTGGATACCTTGAAGTTTGAATATGGCATTGAAACCGGCTCTGGGAATGGATACAT
GGAAGGAGAGGAAGCACTGGACACTTTGAAGCATGAATATGGCATTGAAACCAGTTCTGGTATTCAAAATATACAAGGAGAGGAAGCAATGGACACCCTGAATTGTGAGGATGGCATTGAAACTAGGGATGGGGAAGGTAACGGTGAAGACGATGCTGCTGAGGCCCGCAGGCTTGCCCTTCAGAAAGCCAGCTCTCTTG
CTTTCGGTTCTTTCTTTTTTAATGGCAAATATAAGGACAGTGCTACTGATAGGCTGGTAACATATCACAATTATAGGTTACGGAGTATTCTGGCAGAGCTCCTGAGTCAGCATAGATGGAAGGAATCGGCCGGAGTCTTGAGTGTCTTGTTGAAAGCATCAGTCAAGGATAATTACTTCTTCAGACATCAATACAAATAT
TGGGCTGCCATGGAGGTACTCAGACAGCTGGAGGGTTTCGTTCAAGAGAATGTCTCCAAATACAAGCGTATCTATTTGCTTTTGAAAAGCAAACAACCTGCTCCCAAACGTGCTATTAATAAGAGGCTTCGTCCAACTATCCAATTGGAGCTAGCACTTCATTTAATGAACCAAGGAGATATTTGTGGTGCACACGAGGC
CTCAAAGTCAGTTATGCATGAACCTCAATTTCGGGATGATCCAATTGCAAATCTGGTACATGGATTGATCTTACGTCAGCTGTGGTATGATGGTGTTACTGAAGGATTGAATATCAGAGAAAATAGTGTGAATACTATGTCAGAAGACATGGAGATAGATTCACCGGAAAACAGTAGCATGAGTTATGGCCCAGCTGCAA
ATTCACCTCATTTTCCATCAAGAGAAAACAGTAAAAAGGAAAACCTTACAAGGTTGGATTCTGATAGTTCCATCGGGAATGAGGAAGAATTTCCTAAGGAATCGGGACACAATTTTTCAAGAAAACAATGTGACAGAGGCCCTGCCTATAATTCCCATGAACATCATGTTCAAGATGTCATCTATGATACCTGTGAAGGG
CACGATTTTTCAAGAAAACAATGCGACAGAGGCCCTGTCTATAATACCCATGAACATCATGTTCAAGACGTCGTCTATGATACCTGTGAACATCATGTTCAAGACATTGTTGATGATACCCATGAATATCATGTTCAAAGGTTTAATGAAGACAGAGAGGAATGTTCTTCTGGTGATGAAGGTGATATTTCAGAAGAAAT
GACAGTTTGCTGTTCATCTGGTTTGGATAGAAGGTTATTCCCTGTACGGCTTCCCAGAACTCCAGAGAATAAGAGGTATATCATCCCAACAGAAAGGAGCAATGTCAGAGAACTTCGTCTCGAAGCTTTGAAGCATTTCCGAATTGCTTTGTCTTCATCTCCGCCATTAATAGCTGCTTTGCTTCCATATTTACAG
>TRINITY_DN116592_c0_g1_i1 from sample A1 / Example unspliced isoform:GGGAGAAGTGTTTTGCGTCACCTAGATTACATCACAAGTGAAAAACCCTACAAAGGCATGTCACCGAAAACATCTGAATGTATCGGGAGTTCGGATCGGTCTATCGGCAGCGCACACTGATAAAGCTCGGGTTTAATAAGGTTATGTGGACCTTTACCCTGCAAAGAATAAAGCCACGATCCTTGCTCCCATATCTTTGA
TTCCGCTCCGACCAAAAACCATTCATGTCACTTTGCTGTCTATATATTATATAGAGTGAGAGAGGCAAATTGTTCGTGCATACTGATGAAACAATGATCCGAACTTCAAAATCCTTTTCGGCTATACTATATGGACAATCTCCATACACTATCATTAAACCCTTTTGCGGAAAGTGCAAATCTATGCCAGCAAAATCCGA
AAAACCCTCCTTAAAACCCATTTTGTTTTAAAATTCCGCGGATGGACTCCACAGCACAGGTGTATATGTTTTGGGACTGAGCAGATAGATTCCACACTACAGGTGGATTGTTGCCAATTCAGATACCCAAAACTCTATTCTTGGAAGGTGTTCATCCAAAACAAACAGACATAACGTGAATATTATTCAAGCATCTGTGT
ATTTTTTTTGATACAATGGATACCCAATTCATCAAGTCCGAAGCAGAATATGACGATTAGTACTATTATTCTCTAGGTGCTTCTTCACAATCTCAAGCATTCATGGGGAATTCTGGGAATGGATACATAGAAGGAGAGGAAGCCCTGGATACCTTGAAGTTTGAATATGGCATTGAAACCGGCTCTGGGAATGGATACAT
GGAAGGAGAGGAAGCACTGGACACTTTGAAGCATGAATATGGCATTGAAACCAGTTCTGGTATTCAAAATATACAAGGAGAGGAAGCAATGGACACCCTGAATTGTGAGGATGGCATTGAAACTAGGGATGGGGAAGGTAACGGTGAAGACGATGCTGCTGAGGCCCGCAGGCTTGCCCTTCAGAAAGCCAGCTCTCTTG
CTTTCGGTTCTTTCTTTTTTAATGGCAAATATAAGGACAGTGCTACTGATAGGCTGGTAACATATCACAATTATAGGTTACGGAGTATTCTGGCAGAGCTCCTGAGTCAGCATAGATGGAAGGAATCGGCCGGAGTCTTGAGTGTCTTGTTGAAAGCATCAGTCAAGGATAATTACTTCTTCAGACATCAATACAAATAT
TGGGCTGCCATGGAGGTACTCAGACAGCTGGAGGGTTTCGTTCAAGAGAATGTCTCCAAATACAAGCGTATCTATTTGCTTTTGAAAAGCAAACAACCTGCTCCCAAACGTGCTATTAATAAGAGGCTTCGTCCAACTATCCAATTGGAGCTAGCACTTCATTTAATGAACCAAGGAGATATTTGTGGTGCACACGAGGC
CTCAAAGTCAGTTATGCATGAACCTCAATTTCGGGATGATCCAATTGCAAATCTGGTACATGGATTGATCTTACGTCAGCTGTGGTATGATGGTGTTACTGAAGGATTGAATATCAGAGAAAATAGTGTGAATACTATGTCAGAAGACATGGAGATAGATTCACCGGAAAACAGTAGCATGAGTTATGGCCCAGCTGCAA
ATTCACCTCATTTTCCATCAAGAGAAAACAGTAAAAAGGAAAACCTTACAAGGTTGGATTCTGATAGTTCCATCGGGAATGAGGAAGAATTTCCTAAGGAATCGGGACACAATTTTTCAAGAAAACAATGTGACAGAGGCCCTGCCTATAATTCCCATGAACATCATGTTCAAGATGTCATCTATGATACCTGTGAAGGG
CACGATTTTTCAAGAAAACAATGCGACAGAGGCCCTGTCTATAATACCCATGAACATCATGTTCAAGACGTCGTCTATGATACCTGTGAACATCATGTTCAAGACATTGTTGATGATACCCATGAATATCATGTTCAAAGGTTTAATGAAGACAGAGAGGAATGTTCTTCTGGTGATGAAGGTGATATTTCAGAAGAAAT
GACAGTTTGCTGTTCATCTGgtggaggaccaagaagggatgaatgtggacaatgtatcctttgaatcctaatagatatatgcatatgatagGTTTGGATAGAAGGTTATTCCCTGTACGGCTTCCCAGAACTCCAGAGAATAAGAGGTATATCATCCCAACAGAAAGGAGCAATGTCAGAGAACTTCGTCTCGAAGCTTT
GAAGCATTTCCGAATTGCTTTGTCTTCATCTCCGCCATTAATAGCTGCTTTGCTTCCATATTTACAGCTATTGCTTTCCACTGGTCAAGTAAAGGAGGCATGGAAAACAGTTGAAGCATTTTGTCGTAATTCAAATCATTTTCTACCATTTAGCTTAAGGGCTCGACTTGCAGAGTCGTTGTCTTCAAAACAATCTCACT
TACTTCAACGCTGTTATGAGGAGGTTTTATGCAAAAATCCAGCCTCAGGTCGCTCAGTAAAGGGTCTTGTAAAATTGCACAAAAAAGGTGATTACCAAACAGAGTCGTTGCTGGAGTACATAGGTCTGCACTTAGATGCCACTTATGGGTGTACCTATATTTGGAAAGAATTGGCTTCCTGTTTTCTGAAATTGCAAGCT
AACTGTCAATCTGAGTATGAGATGGATCGCATATCAACACAACAAAATGGTAATCATTCAGATGCACAGTATAAGATCTTTATTTCTGCAAATCAACTTCCAAATATGTTTCAAAAAGCCGATTCCAGAAGCTCTTGGAAGCTGCGGTGCAGATGGTGGGCTAGAAGACATTTTAGCAGAGAGAGAATTTATTTAGAACA
GCAAGAAAATGGTGATTGGGAACACGAGACTTTCAAGGCTGCATGCGCTTGCCACATGTTAGGGCCAAAGTTTGGATATGTCAGTGATATTGTCCGTGGACTTCAAAGGGTGGAAAAGAAGAATATGTTGTCTGTTTTGAAGAGACACATTCAATGTTCTCTCAGATTGCATGAGCATCTATGATGACAGATAATGCAAA
TTACCAAAGGGAAGGACATGAAGTCATATTCTTTTTTGGGGGCAATGATCCTGATATTTACAACCCATTATTTACATCCCACAAGCACACTGAGCTACTTTGTAAGAAGAATGCCTCTGAAAGTTGAAACTGGCTAATTGGCTAAGATGACATGTTGGATATAGCACTTGGCTAGTGTAAACCTGCCAAGCCAAGGTGAG
AACGTGGGTGCCTAGTAGGTGCTTGATAAGCATGGTGTTACATTTAAGTCTTAAGCTTCGCCAGTACAAAATTGTAAAATTGGCCAGAAGATATTTTTGTTTTCTTCTTTTGAGAAAAACTATTTCATATTTTTTGAGAGTGAAATGGCAAAAAATTGTTCACCAATTTGTTTCATCACCTAATAAATAATATCAAGCTC
CTATCATCTTATCC
Intron 2 GTGAGAACGT ... TGTATGTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 68 | 8 | 17 | 0 |
| A2 | 40.74 | 16 | 11 | 1 |
| A3 | 83.33 | 2 | 10 | 0 |
| A4 | 75 | 4 | 12 | 0 |
| A5 | 33.33 | 4 | 2 | 0 |
| A6 | 85.71 | 9 | 54 | 0 |
| A7 | 65.42 | 37 | 70 | 1 |
| A8 | 73.41 | 46 | 127 | 4 |
| A9 | 78.79 | 14 | 52 | 4 |
| A10 | 72.92 | 13 | 35 | 4 |
>TRINITY_DN40035_c0_g1_i4 from sample A8 / Example spliced isoformTAGAAGGAGAGGAAGCCCTGGATACCTTGAAGTTTGAATATGGCATTGAAACCGGCTCTGGGAATGGATACATGGAAGGAGAGGAAGCACTGGACACTTTGAAGCTTGAATATGGCATTGAAACCAGTTCTGGTATTCAAAATATACAAGGAGAGGAAGCAATGGACACCCTGAATTGTGAGGATGGCATTGAAACTAGG
GATGGGGAAGGTAACGGTGAAGACGATGCTGCTGAGGCCCGCAGGCTTGCCCTTCAGAAAGCCAGCTCTCTTGCTTTCGGTTCTTTCTTTTTTAATGGCAAATATAAGGACAGTGCTACTGATAGGCTGGTAACATATCACAATTATAGGTTACGGAGTATTCTGGCAGAGCTCCTGAGTCAGCATAGATGGAAGGAATC
GGCCGGAGTCTTGAGTGTCTTGTTGAAAGCATCAGTCAAGGATAATTACTTCTTCAGACATCAATACAAATATTGGGCTGCCATGGAGGTACTCAGACAGCTGGAGGGTTTCGTTCAAGAGAATGTCTCCAAATACAAGCGTATCTATTTGCTTTTGAAAAGCAAACAACCTGCTCCCAAACGTGCTATTAATAAGAGGC
TTCGTCCAACTATCCAATTGGAGCTAGCACTTCATTTAATGAACCAAGGAGATATTTGTGGTGCACACGAGGCCTCAAAGTCAGTTATGCATGAACCTCAATTTCGGGATGATCCAATTGCAAATCTGGTACATGGATTGATCTTACGTCAGCTGTGGTATGATGGTGTTACTGAAGGATTGAATATCAGAGAAAATAGT
GTGAATACTATGTCAGAAGACATGGAGATAGATTCACCGGAAAACAGTAGCATGAGTTATGGCCCAGCTGCAAATTCACCTCATTTTCCATCAAGAGAAAACAGTAAAAAGGAAAACCTTACAAGGTTGGATTCTGATAGTTCCATCGGGAATGAGGAAGAATTTCCTAAGGAATCGGGACACAATTTTTCAAGAAAACA
ATGTGACAGAGGCCCTGCCTATAATTCCCATGAACATCATGTTCAAGATGTCATCTATGATACCTGTGAAGGGCATGATTTTTCAAGAAAACAATGCGACAGAGGCCCTGTCTATAATACCCATGAACATCATGTTCAAGACGTCGTCTATGATACCTGTGAACATCATGTTCAAGACATTGTTGATGATACCCATGAAT
ATCATGTTCAAAGGTTTAATGAAGACAGAGAGGAATGTTCTTCTGGTGATGAAGGTGATATTTCAGAAGAAATGACAGTTTGCTGTTCATCTGGTGGAGGACCAAGAAGGGATGAATGTGGACAATGTATCCTTTGAATCCTAATAGATATATGCATATGATAGGTTTGGATAGAAGGTTATTCCCTGTACGGCTTCCCA
GAACTCCAGAGAATAAGAGGTATATCATCCCAACAGAAAGGAGCAATGTCAGAGAACTTCGTCTCGAAGCTTTGAAGCATTTCCGAATTGCTTTGTCTTCATCTCCGCCATTAATAGCTGCTTTGCTTCCATATTTACAGCTATTGCTTTCCACTGGTCAAGTAAAGGAGGCATGGAAAACAGTTGAAGCATTTTGTCGT
AATTCAAATCATTTTCTACCATTTAGCTTAAGGGCTCGACTTGCAGAGTCGTTGTCTTCAAAACAATCTCACTTACTTCAACGCTGTTATGAGGAGGTTTTATGCAAAAATCCAGCCTCAGGTCGCTCAGTAAAGGGTCTTGTAAAATTGCACAAAAAAGGTGATTACCAAACAGAGTCGTTGCTGGAGTACATAGGTCT
GCACTTAGATGCCACTTATGGGTGTACCTATATTTGGAAAGAATTGGCTTCCTGTTTTCTGAAATTGCAAGCTAACTGTCAATCTGAGTATGAGATGGATCGCATATCAACACAACAAAATGGTAATCATTCAGATGCACAGTATAAGATCTTTATTTCTGCAAATCAACTTCCAAATATGTTTCAAAAAGCCGATTCCA
GAAGCTCTTGGAAGCTGCGGTGCAGATGGTGGGCTAGAAGACATTTTAGCAGAGAGAGAATTTATTTAGAACAGCAAGAAAATGGTGATTGGGAACACGAGACTTTCAAGGCTGCATGCGCTTGCCACATGTTAGGGCCAAAGTTTGGATATGTCAGTGATATTGTCCGTGGACTTCAAAGGGTGGAAAAGAAGAATATG
TTGTCTGTTTTGAAGAGACACATTCAATGTTCTCTCAGATTGCATGAGCATCTATGATGACAGATAATGCAAATTACCAAAGGGAAGGACATGAAGTCATATTCTTTTTTGGGGGCAATGATCCTGATATTTACAACCCATTATTTACATCCCACAAGCACACTGAGCTACTTTGTAAGAAGAATGCCTCTGAAAGTTGA
AACTGGCTAATTGGCTAAGATGACATGTTGGATATAGCACTTGGCTAGTGTAAACCTGCCAAGCCAAGTGATCAGCTTCGGTGAAGTGCATTTCACATATAATTCTTATCGAGTCACGCATTGCATCCTCAAAGAGTAAAGTGAATGCTCTTGGCAAAGGGAGGTGTAAGATAATATCATTCTGTTAAGCTCGGCGTTGA
ACTCTCCAAATTCATAGCATGCTTGTGAAGTTTAATTGAATGTATATAGTGTTTGGATGGCCTTCAAAACATTAAACCAGAATTGAAAAGTAGCTTGCAACTCTTTTTATTTCAAAACCTTTCTCTTCATTTCAGATTTTGGGTGTAAACATTATGATGCAGATTTTGGGTGTAAACATTATGATGTTTATGCCGCTGTA
TTTTGAATTTTCTCTTTTAGAAAATGTCTGAGCCCATTCTCGATCATGTACACATTTGTGCATCTTATTCATTCTCGCATATTAT
>TRINITY_DN40035_c0_g1_i7 from sample A8 / Example unspliced isoform:ATACAGATCAAATATAGTGTTTTTTGCAAGTCCTGAGGATCTCAGAAACAGGTGATCGCTGTTTTAGCCAGAAATACTATAATGCCCGAGCTTAAGGGCTCGACTTGCAGAGTCGTTGTCTTCAAAACAATCTCACTTACTTCAACGCTGTTATGAGGAGGTTTTATGCAAAAATCCAGCCTCAGGTCGCTCAGTAAAGG
GTCTTGTAAAATTGCACAAAAAAGGTGATTACCAAACAGAGTCGTTGCTGGAGTACATAGGTCTGCACTTAGATGCCACTTATGGGTGTACCTATATTTGGAAAGAATTGGCTTCCTGTTTTCTGAAATTGCAAGCTAACTGTCAATCTGAGTATGAGATGGATCGCATATCAACACAACAAAATGGTAATCATTCAGAT
GCACAGTATAAGATCTTTATTTCTGCAAATCAACTTCCAAATATGTTTCAAAAAGCCGATTCCAGAAGCTCTTGGAAGCTGCGGTGCAGATGGTGGGCTAGAAGACATTTTAGCAGAGAGAGAATTTATTTAGAACAGCAAGAAAATGGTGATTGGGAACACGAGACTTTCAAGGCTGCATGCGCTTGCCACATGTTAGG
GCCAAAGTTTGGATATGTCAGTGATATTGTCCGTGGACTTCAAAGGGTGGAAAAGAAGAATATGTTGTCTGTTTTGAAGAGACACATTCAATGTTCTCTCAGATTGCATGAGCATCTATGATGACAGATAATGCAAATTACCAAAGGGAAGGACATGAAGTCATATTCTTTTTTGGGGGCAATGATCCTGATATTTACAA
CCCATTATTTACATCCCACAAGCACACTGAGCTACTTTGTAAGAAGAATGCCTCTGAAAGTTGAAACTGGCTAATTGGCTAAGATGACATGTTGGATATAGCACTTGGCTAGTGTAAACCTGCCAAGCCAAGgtgagaacgtgggtgcctagtaggtgcttgataagcatggtgttacatttaagtcttaagcttcgcca
gtacaaaattgtaaaattggccagaagatatttttgttttcttcttttgagaaaaactatttcatattttttgagagtgaaatggcaaaaaattgttcaccaatttgtttcatcacctaataaataatatcaagctcctatcatcttatccattctatgatatgtaatgccttgaatgcattaaatgtgcaatacaaaac
aatagttgttttgtgtcttttggcccaaacgtttgcatgccataaataatatcttattttaagttcactgctatctttgatgctaccttttttctgaaaatcaggcttgtatctcgctttaaagtgcaaatgtgcacattgacgcaatatatgcttgtcttcgatattatttacttaccactaataatatggagcattct
gtatgtcagTGATCAGCTTCGGTGAAGTGCATTTCACATATAATTCTTATCGAGTCACGCATTGCATCCTCAAAGAGTAAAGTGAATGCTCTTGGCAAAGGGAGGTGTAAGATAATATCATTCTGTTAAGCTCGGCGTTGAACTCTCCAAATTCATAGCATGCTTGTGAAGTTTAATTGAATGTATATAGTGTTTGGATG
GCCTTCAAAACATTAAACCAGAATTGAAAAGTAGCTTGCAACTCTTTTTATTTCAAAACCTTTCTCTTCATTTCAGATTTTGGGTGTAAACATTATGATGCAGATTTTGGGTGTAAACATTATGATGTTTATGCCGCTGTATTTTGAATTTTCTCTTTTAGAAAATGTCTGAGCCCATTCTCGATCATGTACACATTTGT
GCATCTTATTCATTCTCGCATATTAT
Intron 3 GTATCCTTTG ... CATATGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 53.85 | 3 | 2 | 5 |
| A2 | 69.23 | 2 | 3 | 6 |
| A3 | 55.56 | 6 | 8 | 7 |
| A4 | 60 | 2 | 4 | 2 |
| A5 | 33.33 | 1 | 0 | 1 |
| A6 | 33.33 | 3 | 0 | 3 |
| A7 | 64.71 | 6 | 8 | 14 |
| A8 | 46.67 | 4 | 3 | 4 |
| A9 | 47.06 | 9 | 4 | 12 |
| A10 | 45.45 | 6 | 8 | 2 |
>TRINITY_DN105194_c0_g1_i4 from sample A3 / Example spliced isoformAGCACACTGATAAAGCTCGGGTTTAATAAGGTTATGTGGACCTTTACCCTGCAAAGAATAAAGCCACGATCCTTGCTCCCATATCTTTGATTCCGCTCCGACCAAAAACCATTCATGTCACTTTGCTGTCTATATATTATATAGAGTGAGAGAGGCAAATTGTTCGTGCATACTGATGAAACAATGATCCGAACTTCAAA
ATCCTTTTCGGCTATACTATATGGACAATCTCCATACACTATCATTAAACCCTTTTGCGGAAAGTGCAAATCTATGCCAGCAAAATCCGAAAAACCCTCCTTAAAACCCATTTTGTTTTAAAATTCCGCGGATGGACTCCACAGCACAGGTGTATATGTTTTGGGACTGAGCAGATAGATTCCACACTACAGGTGGATTG
TTGCCAATTCAGATACCCAAAACTCTATTCTTGGAAGGTGTTCATCCAAAACAAACAGACATAACGTGAATATTATTCAAGCATCTGTGTATTTTTTTTGATACAATGGATACCCAATTCATCAAGTCCGAAGCAGAATATGACGATCAGTACTATTATTCTCTAGGTGCTTCTTCACAATCTCAAGCATTCATGGGGAA
TTCTGGGAATGGATACATAGAAGGAGAGGAAGCCCTGGATACCTTGAAGTTTGAATATGGCATTGAAACCGGCTCTGGGAATGGATACATGGAAGGAGAGGAAGCACTGGACACTTTGAAGCTTGAATATGGCATTGAAACCAGTTCTGGTATTCAAAATATACAAGGAGAGGAAGCAATGGACACCCTGAATTGTGAGG
ATGGCATTGAAACTAGGGATGGGGAAGGTAACGGTGAAGACGATGCTGCTGAGGCCCGCAGGCTTGCCCTTCAGAAAGCCAGCTCTCTTGCTTTCGGTTCTTTCTTTTTTAATGGCAAATATAAGGACAGTGCTACTGATAGGCTGGTAACATATCACAATTATAGGTTACGGAGTATTCTGGCAGAGCTCCTGAGTCAG
CATAGATGGAAGGAATCGGCCGGAGTCTTGAGTGTCTTGTTGAAAGCATCAGTCAAGGATAATTACTTCTTCAGACATCAATACAAATATTGGGCTGCCATGGAGGTACTCAGACAGCTGGAGGGTTTCGTTCAAGAGAATGTCTCCAAATACAAGCGTATCTATTTGCTTTTGAAAAGCAAACAACCTGCTCCCAAACG
TGCTATTAATAAGAGGCTTCGTCCAACTATCCAATTGGAGCTAGCACTTCATTTAATGAACCAAGGAGATATTTGTGGTGCACACGAGGCCTCAAAGTCAGTTATGCATGAACCTCAATTTCGGGATGATCCAATTGCAAATCTGGTACATGGATTGATCTTACGTCAGCTGTGGTATGATGGTGTTACTGAAGGATTGA
ATATCAGAGAAAATAGTGTGAATACTATGTCAGAAGACATGGAGATAGATTCACCGGAAAACAGTAGCATGAGTTATGGCCCAGCTGCAAATTCACCTCATTTTCCATCAAGAGAAAACAGTAAAAAGGAAAACCTTACAAGGTTGGATTCTGATAGTTCCATCGGGAATGAGGAAGAATTTCCTAAGGAATCGGGACAC
AATTTTTCAAGAAAACAATGTGACAGAGGCCCTGCCTATAATTCCCATGAACATCATGTTCAAGATGTCATCTATGATACCTGTGAAGGGCATGATTTTTCAAGAAAACAATGCGACAGAGGCCCTGTCTATAATACCCATGAACATCATGTTCAAGACGTCGTCTATGATACCTGTGAACATCATGTTCAAGACATTGT
TGATGATACCCATGAATATCATGTTCAAAGGTTTAATGAAGACAGAGAGGAATGTTCTTCTGGTGATGAAGGTGATATTTCAGAAGAAATGACAGTTTGCTGTTCATCTGGTGGAGGACCAAGAAGGGATGAATGTGGACAATGTTTGGATAGAAGGTTATTCCCTGTACGGCTTCCCAGAACTCCAGAGAATAAGAGGT
ATATCATCCCAACAGAAAGGAGCAATGTCAGAGAACTTCGTCTCGAAGCTTTGAAGCATTTCCGAATTGCTTTGTCTTCATCTCCGCCATTAATAGCTGCTTTGCTTCCATATTTACAGCTATTGCTTTCCACTGGTCAAGT
>TRINITY_DN105194_c0_g1_i3 from sample A3 / Example unspliced isoform:AGCACACTGATAAAGCTCGGGTTTAATAAGGTTATGTGGACCTTTACCCTGCAAAGAATAAAGCCACGATCCTTGCTCCCATATCTTTGATTCCGCTCCGACCAAAAACCATTCATGTCACTTTGCTGTCTATATATTATATAGAGTGAGAGAGGCAAATTGTTCGTGCATACTGATGAAACAATGATCCGAACTTCAAA
ATCCTTTTCGGCTATACTATATGGACAATCTCCATACACTATCATTAAACCCTTTTGCGGAAAGTGCAAATCTATGCCAGCAAAATCCGAAAAACCCTCCTTAAAACCCATTTTGTTTTAAAATTCCGCGGATGGACTCCACAGCACAGGTGTATATGTTTTGGGACTGAGCAGATAGATTCCACACTACAGGTGGATTG
TTGCCAATTCAGATACCCAAAACTCTATTCTTGGAAGGTGTTCATCCAAAACAAACAGACATAACGTGAATATTATTCAAGCATCTGTGTATTTTTTTTGATACAATGGATACCCAATTCATCAAGTCCGAAGCAGAATATGACGATCAGTACTATTATTCTCTAGGTGCTTCTTCACAATCTCAAGCATTCATGGGGAA
TTCTGGGAATGGATACATAGAAGGAGAGGAAGCCCTGGATACCTTGAAGTTTGAATATGGCATTGAAACCGGCTCTGGGAATGGATACATGGAAGGAGAGGAAGCACTGGACACTTTGAAGCTTGAATATGGCATTGAAACCAGTTCTGGTATTCAAAATATACAAGGAGAGGAAGCAATGGACACCCTGAATTGTGAGG
ATGGCATTGAAACTAGGGATGGGGAAGGTAACGGTGAAGACGATGCTGCTGAGGCCCGCAGGCTTGCCCTTCAGAAAGCCAGCTCTCTTGCTTTCGGTTCTTTCTTTTTTAATGGCAAATATAAGGACAGTGCTACTGATAGGCTGGTAACATATCACAATTATAGGTTACGGAGTATTCTGGCAGAGCTCCTGAGTCAG
CATAGATGGAAGGAATCGGCCGGAGTCTTGAGTGTCTTGTTGAAAGCATCAGTCAAGGATAATTACTTCTTCAGACATCAATACAAATATTGGGCTGCCATGGAGGTACTCAGACAGCTGGAGGGTTTCGTTCAAGAGAATGTCTCCAAATACAAGCGTATCTATTTGCTTTTGAAAAGCAAACAACCTGCTCCCAAACG
TGCTATTAATAAGAGGCTTCGTCCAACTATCCAATTGGAGCTAGCACTTCATTTAATGAACCAAGGAGATATTTGTGGTGCACACGAGGCCTCAAAGTCAGTTATGCATGAACCTCAATTTCGGGATGATCCAATTGCAAATCTGGTACATGGATTGATCTTACGTCAGCTGTGGTATGATGGTGTTACTGAAGGATTGA
ATATCAGAGAAAATAGTGTGAATACTATGTCAGAAGACATGGAGATAGATTCACCGGAAAACAGTAGCATGAGTTATGGCCCAGCTGCAAATTCACCTCATTTTCCATCAAGAGAAAACAGTAAAAAGGAAAACCTTACAAGGTTGGATTCTGATAGTTCCATCGGGAATGAGGAAGAATTTCCTAAGGAATCGGGACAC
AATTTTTCAAGAAAACAATGTGACAGAGGCCCTGCCTATAATTCCCATGAACATCATGTTCAAGATGTCATCTATGATACCTGTGAAGGGCATGATTTTTCAAGAAAACAATGCGACAGAGGCCCTGTCTATAATACCCATGAACATCATGTTCAAGACGTCGTCTATGATACCTGTGAACATCATGTTCAAGACATTGT
TGATGATACCCATGAATATCATGTTCAAAGGTTTAATGAAGACAGAGAGGAATGTTCTTCTGGTGATGAAGGTGATATTTCAGAAGAAATGACAGTTTGCTGTTCATCTGGTGGAGGACCAAGAAGGGATGAATGTGGACAATgtatcctttgaatcctaatagatatatgcatatgatagGTTTGGATAGAAGGTTATT
CCCTGTACGGCTTCCCAGAACTCCAGAGAATAAGAGGTATATCATCCCAACAGAAAGGAGCAATGTCAGAGAACTTCGTCTCGAAGCTTTGAAGCATTTCCGAATTGCTTTGTCTTCATCTCCGCCATTAATAGCTGCTTTGCTTCCATATTTACAGCTATTGCTTTCCACTGGTCAAGT