sp|F4HZB5|NET1D_ARATH ----> Protein NETWORKED 1D
Intron 1 GTATGTAGTC ... GGCAAAGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 34.78 | 15 | 8 | 8 |
| A2 | 34.78 | 15 | 11 | 5 |
| A3 | 35.48 | 10 | 5 | 6 |
| A4 | 20 | 8 | 3 | 1 |
| A5 | 33.33 | 6 | 6 | 0 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 20 | 4 | 2 | 0 |
| A8 | -1 | 0 | 0 | 0 |
| A9 | 33.33 | 2 | 1 | 1 |
| A10 | 33.33 | 3 | 0 | 3 |
>TRINITY_DN126931_c1_g1_i5 from sample A1 / Example spliced isoformAGACGCAAGCGACCGTGCGCCGTCCGATCAGATTCCCCGCGGATGGACACTGTCAAATTTCAGTAATTTTATTTAAGGCAAGTCAAAATCGAATTCCATTTTAATTTTACAGGGACAAAATTCCTGTCAGAAAATGGCGTCTGTGAAGTCCAGTATTTTGCGCACAGGACGAAGCGCAGGGATGCAAAGCTTGACTCTAT
TTTCAGCTCTGAAGAAAATCTCAGTGAAAGAGCAACCGGTAGGTGCAGAGTTCGAGTCACGACATCCAGAAGCGTGTCTTACCGGACGCACGCTGTATTTTATGCCGAAATACGGTGGCTGATGTGATGAGGAGGACGCGGTGAAAGCCTGGTTCGAATCGAATAAATACGGTTAAAACTTTTGCAGCATTCGTCTAAGC
TCGAGGAATTTTCACAAACACTTGCCGATCCGGCCCATAAAAGGGAATTTATTATCAAAGGCAGGGGATTCGATCCCCTGACCTTTCTGTCGTGTCGATTTCTGAACTTTGAACTTCGAAGGCTGGAGGAATTCGCCGTCCGCACTACAGTTTAAGATATCGACTCTTCTCCGCAACAGACTAGACGTGCCTACTGTACG
TTTTAATGGTTGAAGTCGAGTTGTTCAAGTCATTCTTTAAAATTTAAGGTCCTTCATGCATGCATGCGCTTGTCTTTGTTGGAATCCCGTAAAATGAAAAGTGAACTTGC
>TRINITY_DN126931_c1_g1_i9 from sample A1 / Example unspliced isoform:AGACGCAAGCGACCGTGCGCCGTCCGATCAGATTCCCCGCGGATGGACACTGTCAAATTTCAGTAATTTTATTTAAGGCAAGTCAAAATCGAATTCCATTTTAATTTTACAGGGACAAAATTCCTGTCAGAAAATGGCGTCTGTGAAGTCCAGTATTTTGCGCACAGGACGAAGCGCAGGGATGCAAAGCTTGACTCTAT
TTTCAGCTCTGAAGAAAATCTCAGTGAAAGAGCAACCGGTAGGTGCAGAGTTCGAGTCACGACATCCAGAAGCGTGTgtatgtagtcttaatattctgttgtttttgtttgttttaccgtcgtttcttttgcgttttcatacttcttgaaggcatattcggttaaattattggcgaagtatttaattaattttattatta
tttaataattttggtcggcaaagtagCTTACCGGACGCACGCTGTATTTTATGCCGAAATACGGTGGCTGATGTGATGAGGAGGACGCGGTGAAAGCCTGGTTCGAATCGAATAAATACGGTTAAAACTTTTGCAGCATTCGTCTAAGCTCGAGGAATTTTCACAAACACTTGCCGATCCGGCCCATAAAAGGGAATTTA
TTATCAAAGGCAGGGGATTCGATCCCCTGACCTTTCTGTCGTGTCGATTTCTGAACTTTGAACTTCGAAGGCTGGAGGAATTCGCCGTCCGCACTACAGTTTAAGATATCGACTCTTCTCCGCAACAGACTAGACGTGCCTACTGTACGTTTTAATGGTTGAAGTCGAGTTGTTCAAGTCATTCTTTAAAATTTAAGGTC
CTTCATGCATGCATGCGCTTGTCTTTGTTGGAATCCCGTAAAATGAAAAGTGAACTTGC
Intron 2 GTGAGAACTT ... TGTTGTCGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 50 | 5 | 5 | 5 |
| A2 | 60 | 5 | 10 | 5 |
| A3 | 40 | 3 | 3 | 1 |
| A4 | 70 | 3 | 6 | 8 |
| A5 | 58.33 | 5 | 9 | 5 |
| A6 | 100 | 0 | 3 | 3 |
| A7 | 100 | 0 | 5 | 10 |
| A8 | 100 | 0 | 3 | 4 |
| A9 | 100 | 0 | 1 | 2 |
| A10 | 100 | 0 | 3 | 2 |
>TRINITY_DN117926_c1_g2_i9 from sample A2 / Example spliced isoformGACGCAAGCGACCGTGCGCCGTCCGATCAGATTCCCCGCGGATGGACACTGTCAAATTTCAGTAATTTTATTTAAGGCAAGTCAAAATCGAATTCCATTTTAATTTTACAGGGACAAAATTCCTGTCAGAAAATGGCGTCTGTGAAGGCCAGTATTTTGCGCACAGAACGAAGCGCAGGGATGCAAAGCTTGACTCTATT
TTCAGCTCTGAAGAAAATCTCAGTGAAAGAGCAACCGGTAGGTGCAGAGTTCGAGTCACGACATCCAGAAGCGTGTCTTACCGGACGCACGCTGTATTTTATGCCGAAATACGGTGGCTGATGTGATGAGGAGGACGCGGTGAAAGCCTGGTTCGAATCGAATAAATACGGTTAAAACTTTTGCAGCATTCGTCTAAGCT
CGAGGAATTTTCACAAACACTTGCCGATCCGGCCCATAAAAGGGAATTTATTATCAAAGGCAGGGGATTCGATCCCCTGACCTTTCTGTCGTGTCGATTTCTGAACTTTGAACTTCGAAGGCTGGAGGAATTCGCCGTCCGCACTACAGTTTAAGATATCGACTCTTCTCCGCAACAGACTAGACGTGCCTACTTGGTGC
AGGTACTTCCTCCGGCATCTTGTTTAGTGAAATTTCAGTGCCTCCTGGTTTTCTAGAATGAACTGTAGTTCTTAGTCCTCCTGAATCCAAAATCAGTGTTATGCAAATCCATATAAGGTTTTACGAGGGCGATTCATCTGGAACAAATCTGGTAATTGCAACTCACTTCCTGGCTTGAACCAATAACACGAGTCATGATG
GACAGTGCTGTTAATCATTCACATTCTTGGTGGTGGGATAGCCACGTAAGTCCAAAACACTCCAGATGGCTTAAAGAAAACTTGACAGATATGGATCTCAAAGTTAAAGACATGTTGAAACTTATAGAAGAGGACGCAGACTCCTTTGCCAAACGTGCAGAGATGTACTATAAGAAGCGACCAGAACTTATTAGTTTAGT
TGAAGAATTTTACAGAGGTTATCGTGCTTTAGCAGAACGATATGATCACATTACTGGGGAGCTACATCATGTGCAGTGTAATATGGAAGATGCATTCCCAAACCAAATGCACTATGCAATGGATGATGTTTCTCCTCGAGCTTCACTTATTAATAAACAGAGCCAGGGCCATTTGGGGAAAGAACTCGAGGGTTTTGATT
CTTTCTTGACAGAGACAGGTCACAGATTTCTTGACAGTAAGCAAACTGTAGATACTTTGGTTTTCTCAGAAGAAATGGGAATGGAAATTCCAAATCCAAAACTTGTTCCTCGCTTTCCGATGCAGAAAAGGACAGGAACTCCATCTGGGCAAATTGAAGTTCCAAATGAAATAACAAAATTGCAGAAAGAAATTCTAAGT
TTGCAACAAGAGAAGGAAATATTGAAAGGAGACTATGAGAGAGGTTCCGAGCAATTCAGGGTTGTTGAGGAACAGTTTTTAAAACTTCAAGAAAAACTGCAACATGTTCAAGAAGAGAACCACAAGCTCAATGATTCATCATCATCATATGTGGCACGAATCAGTCAACTTGAGGAGCAATTGTGCATGCTGAAGAAGCA
GAAAAGTGGACATATTGAGGAAGGAGAGGCTTCCAGTCAAAAGCTACAATCTGAAACTCAGGAGAAGGATAAACTCATCTTAGAAATTCAGAACTTGGAAGCGAAATTGCAATCAGAGAGACAAAACATACAAACAGAGTATGAATGCTCCACTCCCGAACACAGAAATAACGGGAAAACCCTTGCTAATTTACGAGATG
AACTTTTCAAGTTTCATCATGAGAATCATAATCTCAGGGTACAGGTTATGACAGGGGTCCAGCAGTTGCAAAAAGCCAATGAAGAAATCCAGAACTTGCACCAGGCTCTTTTAACATCACAAGCAGAAAATGACACCATGGTTTTTCAGTACCAACAAAGTCTGAAGTTGTACGAGGTTGCTGAAAACAGAGCAAAGGAC
TTGCAGATAAAAATGGCCCATTTAAACGAAGAAAACAAAAGAATCAAAGATGAAATCGCAGGTGGAGTTCTTTGCATGAATAATAAAGAGGAAAGAACACAGAACTTGGAGAGAGAGAAAAGTGCTTTTCAACAGGATACTTGGCACAGAATTCAGAGGACAACTTCTTTACAAGATGGACCCATAACAAAATATAATGA
GGAACAGAATGTTGGCATTCAACTTCAAGATGAGTCTATGCAAATGTTGAAGTTTGATGCTGTTCTTAAAAACTACCAACAGTCGATGAGTCAATTGCAAGAACACCAAAAAATATTGTCAATTGAACTCCAAGCTAGGAATGAGAGGCTGAAGGATGCTGATAAACGAATAAAGCTTTTAGAGGAAGAGATTAGTCATT
TACAAGAAGATAATGGCAATCTTAAGGAGAAATCATCATCCACAGTTGTTTCTATTAAGAATTTAGAAAAGGAAGTCTATACACTGAAAAAAGACAAAAACAGTTTGTTAAATGAGGTCACATTTCGAGTGGACCAGAGGGATGCACTACAACAAGAACTTTATTGCCTGAAAGAAGACAGAAATGACCTTGACAGAAGA
TTTCAGACAATGCTGAAGCAAATTCAGTCCTTGGGGCTAGATGCAGAGAGCATTCAGTTAGTCTGTATTATTTCACAGGATATTAGCCAGAAATTGAGGATAAGTTACAAGATGGTGTGGCACTGTGCATTCATTCTTTGCTTGAGACTGGTATCAAAATTTGGGATTTTGATTGGGGACAAGTTAGAAATTGTAGTCGA
TGTTGGATATGCTGCTTGTCTAAACAGTCCAGAGACGAGGCAAATAAATTCAAACACAAAGGGGGTTTCTACAGAAGTGGAAATAAAGAATTGGATTAAAGTAGCAACTCATTGCCTCCTTGGAAGACATAAATACAAAAGAAAATAATATAGCATCAGTGATGGCAGATGCTTGACATATGTATTGGAACCTGATCTCC
TTACACCTCTTCAAAATGCACGGGTCACTATATTCAAAATAAATGCATCTACATGGA
>TRINITY_DN117926_c1_g2_i1 from sample A2 / Example unspliced isoform:GACGCAAGCGACCGTGCGCCGTCCGATCAGATTCCCCGCGGATGGACACTGTCAAATTTCAGTAATTTTATTTAAGGCAAGTCAAAATCGAATTCCATTTTAATTTTACAGGGACAAAATTCCTGTCAGAAAATGGCGTCTGTGAAGGCCAGTATTTTGCGCACAGAACGAAGCGCAGGGATGCAAAGCTTGACTCTATT
TTCAGCTCTGAAGAAAATCTCAGTGAAAGAGCAACCGGTAGGTGCAGAGTTCGAGTCACGACATCCAGAAGCGTGTCTTACCGGACGCACGCTGTATTTTATGCCGAAATACGGTGGCTGATGTGATGAGGAGGACGCGGTGAAAGCCTGGTTCGAATCGAATAAATACGGTTAAAACTTTTGCAGCATTCGTCTAAGCT
CGAGGAATTTTCACAAACACTTGCCGATCCGGCCCATAAAAGGGAATTTATTATCAAAGGCAGGGGATTCGATCCCCTGACCTTTCTGTCGTGTCGATTTCTGAACTTTGAACTTCGAAGGCTGGAGGAATTCGCCGTCCGCACTACAGTTTAAGATATCGACTCTTCTCCGCAACAGACTAGACGTGCCTACTTGGTGC
AGGTACTTCCTCCGGCATCTTGTTTAGTGAAATTTCAGTGCCTCCTGGTTTTCTAGAATGAACTGTAGTTCTTAGTCCTCCTGAATCCAAAATCAGTGTTATGCAAATCCATATAAGGTTTTACGAGGGCGATTCATCTGGAACAAATCTGGTAATTGCAACTCACTTCCTGGCTTGAACCAATAACACGAGTCATGATG
GACAGTGCTGTTAATCATTCACATTCTTGGTGGTGGGATAGCCACGTAAGTCCAAAACACTCCAGATGGCTTAAAGAAAACTTGACAGATATGGATCTCAAAGTTAAAGACATGTTGAAACTTATAGAAGAGGACGCAGACTCCTTTGCCAAACGTGCAGAGATGTACTATAAGAAGCGACCAGAACTTATTAGTTTAGT
TGAAGAATTTTACAGAGGTTATCGTGCTTTAGCAGAACGATATGATCACATTACTGGGGAGCTACATCATGTGCAGTGTAATATGGAAGATGCATTCCCAAACCAAATGCACTATGCAATGGATGATGTTTCTCCTCGAGCTTCACTTATTAATAAACAGAGCCAGGGCCATTTGGGGAAAGAACTCGAGGGTTTTGATT
CTTTCTTGACAGAGACAGGTCACAGATTTCTTGACAGTAAGCAAACTGTAGATACTTTGGTTTTCTCAGAAGAAATGGGAATGGAAATTCCAAATCCAAAACTTGTTCCTCGCTTTCCGATGCAGAAAAGGACAGGAACTCCATCTGGGCAAATTGAAGTTCCAAATGAAATAACAAAATTGCAGAAAGAAATTCTAAGT
TTGCAACAAGAGAAGGAAATATTGAAAGGAGACTATGAGAGAGGTTCCGAGCAATTCAGGGTTGTTGAGGAACAGTTTTTAAAACTTCAAGAAAAACTGCAACATGTTCAAGAAGAGAACCACAAGCTCAATGATTCATCATCATCATATGTGGCACGAATCAGTCAACTTGAGGAGCAATTGTGCATGCTGAAGAAGCA
GAAAAGTGGACATATTGAGGAAGGAGAGGCTTCCAGTCAAAAGCTACAATCTGAAACTCAGGAGAAGGATAAACTCATCTTAGAAATTCAGAACTTGGAAGCGAAATTGCAATCAGAGAGACAAAACATACAAACAGAGTATGAATGCTCCACTCCCGAACACAGAAATAACGGGAAAACCCTTGCTAATTTACGAGATG
AACTTTTCAAGTTTCATCATGAGAATCATAATCTCAGGGTACAGGTTATGACAGGGGTCCAGCAGTTGCAAAAAGCCAATGAAGAAATCCAGAACTTGCACCAGGCTCTTTTAACATCACAAGCAGAAAATGACACCATGGTTTTTCAGTACCAACAAAGTCTGAAGTTGTACGAGGTTGCTGAAAACAGAGCAAAGGAC
TTGCAGATAAAAATGGCCCATTTAAACGAAGAAAACAAAAGAATCAAAGATGAAATCGCAGGTGGAGTTCTTTGCATGAATAATAAAGAGGAAAGAACACAGAACTTGGAGAGAGAGAAAAGTGCTTTTCAACAGGATACTTGGCACAGAATTCAGAGGACAACTTCTTTACAAGATGGACCCATAACAAAATATAATGA
GGAACAGAATGTTGGCATTCAACTTCAAGATGAGTCTATGCAAATGTTGAAGTTTGATGCTGTTCTTAAAAACTACCAACAGTCGATGAGTCAATTGCAAGAACACCAAAAAATATTGTCAATTGAACTCCAAGCTAGGAATGAGAGGCTGAAGGATGCTGATAAACGAATAAAGCTTTTAGAGGAAGAGATTAGTCATT
TACAAGAAGATAATGGCAATCTTAAGGAGAAATCATCATCCACAGTTGTTTCTATTAAGAATTTAGAAAAGGAAGTCTATACACTGAAAAAAGACAAAAACAGTTTGTTAAATGAGGTCACATTTCGAGTGGACCAGAGGGATGCACTACAACAAGAACTTTATTGCCTGAAAGAAGACAGAAATGACCTTGACAGAAGA
TTTCAGACAATGCTGAAGCAAATTCAGTCCTTGGGGCTAGATGCAGAGAGCATTCAGTTAGTCTGTATTATTTCACAGGATATTAGCCAGAAATTGAGGATAAGTTACAAGATGGTGTGGCACTGTGCATTCATTCTTTGCTTGAGACTGGTATCAAAATTTGGGATTTTGATTGGGGACAAGTTAGAAATTGTAGTCGA
TGTTGGATATGCTGCTTGTCTAAACAGTCCAGAGACGAGGCAAATAAATTCAAACACAAAGGGGGTTTCTACAGAAGTGGAAATAAAGAATTGGATTAAAGTAGCAACTCATTGCCTCCTTGGAAGACAGAAATACAAAAGAAAATAATACAACATTAGTTATTGATGGCAGATGCTTGACATATGCATTGGAACCTGAT
CTCCgtgagaactttttgaaattgagttgccaatgcttcactgtcatttgttgtcgagTTACACCTCTTCAAAAGGCACAGGTCACTATATTAATCAGACACTATGCAAGACGAGTAACCCTAAGCATTGGGGATGGTGCCAATGATGTAAGCATGATACAAGCTGCTCATGTTGGTGTTGCAATTAGAGGACAAGAAGG
GATGCAAGCTGTAATGGCCAGCGACTTTGCAATTTCTCAATTCAGATTCCTGACAGAGCTCCTCCTTGTCCATGGAAGGCTGTCATATATTCGGATTTCAAAGGTGGTAACCTATTTTTTCTATAAGAACATAGCACTCACAATGACACAAGTTTGGTTCACCTTCTTTTCTGGGTATTCCGGTGCAAATTTTTACAGTG
ATTGGTACCAATCATTATATAATATCCTTTTCACGTCACTTCCAGCTTTTGCCATTGGAATTTTGGACCAGGATGTAAGTACCACTGTTTCAAAGCAGTTTCCTCAGTTATACAAAGCCGGCATTGACAACTTATATTTTAGATACAACTATTAGCAAGATGGCTGCTGTCAGTTAGTGGAAAAGTGATGAT