sp|F4ITM1|RGSL1_ARATH ----> E3 ubiquitin-protein ligase RSL1
Intron 1 GTGCATTATT ... TTGCCCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 38.18 | 25.9 | 13.5 | 16 |
| A2 | 27.91 | 31 | 18.8 | 12 |
| A3 | 19.7 | 24.5 | 9.3 | 6 |
| A4 | 21.05 | 41 | 16.1 | 11 |
| A5 | 40 | 13 | 8.8 | 8.7 |
| A6 | 25.9 | 149.5 | 46.7 | 52.2 |
| A7 | 31.68 | 141.8 | 55.2 | 65.8 |
| A8 | 29.9 | 82 | 29.8 | 35 |
| A9 | 30.29 | 127.6 | 39.8 | 55.5 |
| A10 | 32.22 | 118.9 | 49.9 | 56.5 |
>TRINITY_DN115377_c1_g3_i1 from sample A1 / Example spliced isoformAGGATGGCGGAGCAGGGCATTACCATAGATTTAAACTGCGAGGAAGATGGTGACTTTGAAATTGAGCTTCAGACAGCCATCGAAGCATCTCTGGATGATTATGCTCTGCAACTTCAACTGGAGGAAGTCATAGCTTTCTCTGATGCATTATATGCATCTGAACTACAGCTTGAAGAGGCACGAGCTGCATCTGAATCTGC
GCTTGCTCCCTCATCTTCAAATTCAAATCCAGGCGGTTCCGCTACTCCAACAGAAAACGATGATCCCACCCAGGATGGAGTGGGTAAACGCCTGAGAAGCGGGCACATATTGGTTCCCTCGCCCAAAAGGGTGAGAAGAGCAGGAAAGGAAGCGGTGGAAGGAAATGAAGATGCCCCTCTTGTGAAAGAATCGTGCAGCA
TCTGTTTAGAAGCCAAAGATCCATCCGAATATTTTGAAAGCATTGCTTGTTCGCACAGGTTTTGTTCTACTTGTACGGTCCTGCATATCCGTAGTAAACTGCAAGAAAAAATGGTGACCATTCAGTGCCCTGAGCCCAATTGCAGCGAGCATTTGAGTCCTCAACAATGCCAATTGATCCTTCCCAAACAAACCCTAGAG
GTATGGTGTTTGGCATTGGCGGAAGCTGAGATTCCCAGTTCTCAGAGGTTCTATTGCCCTTATAAGGATTGCTCGGCACTCTTGTGGAAGGATGTGCCTGAAGTAGGAAGCTCAAGTGGGGCAGCTTCTGTTGTTATTAAAGAATCAGAATGCCCCGAATGCAAAAGGTTATTCTGTGCTCAATGTGTTGTGCCATGGCA
TGCAGGCTTGGATTGTTCCGACTTGGCGAACCTGTCGCCTTCCGAGAAAGAGAAAGATGATTTGATGCTATTTAAGCTCGCCAAAGAGAAAGAATGGCAACGGTGTGAAAAATGCGGACGAATTGTTGAAAAAACGTCTGGATGCTGTCACATGATTTGCAGATGTGGTTACCAGTTTTGTTATAAATGCGGATCGGAAT
GGAAGAATGAGAGAGTGCCTTGCAAATGCTCTGTGTGGGAAGAATGATAAAGGGAACTGAGGTTTTCTTGGATTTGGGACCTAGGAGAATGCCATGTTTTGAATAATACATATTAGCTATAAATATTAAAAATATATATGGTTTACCAAATTACATTTTTTTTTTTTGGCTAATCTTGCAATGTAACCCTGATTTTCAAT
TCTTATACAGGAGAATTGTCTATTTTTCAGGTTGCATTCAATTTTGAACTTGTATTATAATGTTGTATTCAAGTGTGTTTGTAATTTGATCTTATACTAGAACTTTTTCTTCGTGATTATTTTGTTTTGTTTCAA
>TRINITY_DN115377_c1_g3_i2 from sample A1 / Example unspliced isoform:AGGATGGCGGAGCAGGGCATTACCATAGATTTAAACTGCGAGGAAGATGGTGACTTTGAAATTGAGCTTCAGACAGCCATCGAAGCATCTCTGGATGATTATGCTCTGCAACTTCAACTGGAGGAAGTCATAGCTTTCTCTGATGCATTATATGCATCTGAACTACAGCTTGAAGAGGCACGAGCTGCATCTGAATCTGC
GCTTGCTCCCTCATCTTCAAATTCAAATCCAGGCGGTTCCGCTACTCCAACAGAAAACGATGATCCCACCCAGgtgcattattcatacttcagagccattcaattttgaggagaaatggattttgttttgaaaattcaattttgtgggtgttgtttctgtgtgttttgccctcagGATGGAGTGGGTAAACGCCTGAGAA
CCGGGCGCATATTGGTTCCTTCGCCCAAAAGGGTGAGAAGAGCAGGAAAGGAAGCGGTGGAAGGAAATGAAGATGCCCCTCTTGTGAAAGAATCGTGCAGCATCTGTTTAGAAGCCAAAGATCCATCCGAATATTTTGAAAGCATTGCTTGTTCGCACAGGTTTTGTTCTACTTGTACGGTCCTGCATATCCGTAGTAAA
CTGCAAGAAAAAATGGTGACCATTCAGTGCCCTGAGCCCAATTGCAGCGAGCATTTGAGTCCTCAACAATGCCAATTGATCCTTCCCAAACAAACCCTAGAGGTATGGTGTTTGGCATTGGCGGAAGCTGAGATTCCCAGTTCTCAGAGGTTCTATTGCCCTTATAAGGATTGCTCGGCACTCTTGTGGAAGGATGTGCC
TGAAGTAGGAAGCTCAAGTGGGGCAGCTTCTGTTGTTATTAAAGAATCAGAATGCCCCGAATGCAAAAGGTTATTCTGTGCTCAATGTGTTGTGCCATGGCATGCAGGCTTGGATTGTTCCGACTTGGCGAACCTGTCGCCTTCCGAGAAAGAGAAAGATGATTTGATGCTATTTAAGCTCGCCAAAGAGAAAGAATGGC
AACGGTGTGAAAAATGCGGACGAATTGTTGAAAAAACGTCTGGATGCTGTCACATGATTTGCAGATGTGGTTACCAGTTTTGTTATAAATGCGGATCGGAATGGAAGAATGAGAGAGTGCCTTGCAAATGCTCTGTGTGGGAAGAATGATAAAGGGAACTGAGGTTTTCTTGGATTTGGGACCTAGGAGAATGCCATGTT
TTGAATAATACATATTAGCTATAAATATTAAAAATATATATGGTTTACCAAATTACATTTTTTTTTTTTGGCTAATCTTGCAATGTAACCCTGATTTTCAATTCTTATACAGGAGAATTGTCTATTTTTCAGGTTGCATTCAATTTTGAACTTGTATTATAATGTTGTATTCAAGTGTGTTTGTAATTTGATCTTATACT
AGAACTTTTTCTTCGTGATTATTTTGTTTTGTTTCAA