NA ----> NA
Intron 1 GTAAGACTGT ... AATCTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 37.02 | 8.6 | 5.6 | 5 |
| A2 | 59.3 | 4.8 | 4.2 | 7 |
| A3 | 0 | 1.8 | 0.5 | 0 |
| A4 | 0 | 1.5 | 1.6 | 0 |
| A5 | 50 | 4 | 1.3 | 4 |
| A6 | 20.91 | 34.6 | 5 | 9 |
| A7 | 30.25 | 64.7 | 7.2 | 28 |
| A8 | 27.65 | 60.3 | 8.4 | 23 |
| A9 | 32.94 | 67.5 | 8.3 | 33 |
| A10 | 32.15 | 61.8 | 8.7 | 29 |
>TRINITY_DN76941_c0_g1_i1 from sample A2 / Example spliced isoformCACAGAACGAGAATGCTGTATGTGTGGCGATGTTGGATTTCAGGAATACTTGTTCAGATGCCACAGATGCCACCACCGATTTCAGCACATATATTGCAGCAGGTTGTATTCTGATCAATTGGAATTAGACGGCGTAAATGTTTGTGACTGGTGCCTCGACTTCCAAGCAAGGCAGAAAATTCAAAGCCACAAAAGGAAAG
CTGGATTGCAGGAAATGAGAAGTAGGAAGGCCAAGAAGGTAGCTGGCAATGAAATTGTGTCCAGATCGGCATCCACAAGTGCCATGAAGCAACCTGCGTCGGTAACCATTGAGAAACCCAGAAAGGCTAATGCCAAACCAACTAATCTTAATCTCCACCTCAAATATGGAGGGAACAAACAGAACCAGCCTTCGAATCTC
CCAGAAGGCTGCAGGATGTCTAACGAAAGCTGCAGAAACGTGCCCCGTACTTCTGTCAAGAGGAACAGCTCCAAAGGTGGATTGGGTCGTCGGTATAAGCTTGTCTCGGACGTGCTTTGCTTATAAACGAAAGGCAGACTTTTTTTAACATATTCCCAAGACAGAATTTCATGCTCAGACGTTTCTCTGGAGATCTGCAG
TCTATTTTATGGCTCGACACAAGAACATACTATATACTGTAGCTGTATTAACTGTTTTTCTTACTGTATATAACAGATATAAATTATAGAGCTCAGGAGTAACTCCC
>TRINITY_DN76941_c0_g1_i2 from sample A2 / Example unspliced isoform:CACAGAACGAGAATGCTGTATGTGTGGCGATGTTGGATTTCAGGAATACTTGTTCAGATGCCACAGATGCCACCACCGATTTCAGCACATgtaagactgtctcccattaagttcagtaccgaatactggcaatgcctctaatggtctgttttgggggcataaacttagttatttgatttctgatatgtgcgttatggagc
caatcttgcagATATTGCAGCAGGTTGTATTCTGATCAATTGGAATTAGACGGCGTAAATGTTTGTGACTGGTGCCTCGACTTCCAAGCAAGGCAGAAAATTCAAAGCCACAAAAGGAAAGCTGGATTGCAGGAAATGAGAAGTAGGAAGGCCAAGAAGGTAGCTGGCAATGAAATTGTGTCCAGATCGGCATCCACAAG
TGCCATGAAGCAACCTGCGTCGGTAACCATTGAGAAACCCAGAAAGGCTAATGCCAAACCAACTAATCTTAATCTCCACCTCAAATATGGAGGGAACAAACAGAACCAGCCTTCGAATCTCCCAGAAGGCTGCAGGATGTCTAACGAAAGCTGCAGAAACGTGCCCCGTACTTCTGTCAAGAGGAACAGCTCCAAAGGTG
GATTGGGTCGTCGGTATAAGCTTGTCTCGGACGTGCTTTGCTTATAAACGAAAGGCAGACTTTTTTTAACATATTCCCAAGACAGAATTTCATGCTCAGACGTTTCTCTGGAGATCTGCAGTCTATTTTATGGCTCGACACAAGAACATACTATATACTGTAGCTGTATTAACTGTTTTTCTTACTGTATATAACAGATA
TAAATTATAGAGCTCAGGAGTAACTCCC
Intron 2 GTACATATAG ... TGTCTGCTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.67 | 2 | 8 | 0 |
| A2 | 66.67 | 3 | 4 | 8 |
| A3 | 37.5 | 5 | 2 | 4 |
| A4 | 38.46 | 4 | 3 | 2 |
| A5 | 20 | 10 | 4 | 1 |
| A6 | 18.2 | 25 | 7 | 4.1 |
| A7 | 25.37 | 66 | 30 | 14.9 |
| A8 | 28.31 | 50 | 16 | 23.5 |
| A9 | 20.71 | 50 | 14 | 12.1 |
| A10 | 28.26 | 76 | 27 | 32.9 |
>TRINITY_DN37216_c0_g1_i2 from sample A6 / Example spliced isoformGTACGAAGCACAGTTGCGGTTGCAAGACTCTTACCGTTAAATCTCAGGGATTCCACATGACATTCTGGCGCAACAGCAAGAATTTGCCTTCTCTGCGCATTTTTCTTTTCCGAAACGGATGTTGCTTCTGCTAATCTTGACACTTGTGTAACAAGAATGCACACCATCAATTTGTCCTGCTCCGGGTAAAACCGGTGGCT
TGGTATCTCCAGCATCTTTCGCTCACACCAGGAACAGTAACCTGGGCAAGCAGTCGTCCATTGAAAACAATCGCTGACGCTCGTCCATGGATCCCGAACGAAAGGAATTCGATTGTAGCTCCAGAAATACTAAGAATGACACAGAACGAGAATGCTGTATGTGTGGCGATGTTGGATTTCAGGAATACTTGTTCAGATGC
CACAGATGCCACCACCGATTTCAGCACATATATTGCAGCAGGTTGTATTCTGATCAATTGGAATTAGACGGCGTAAATGTTTGTGACTGGTGCCTCGACTTCCAAGCAAGGCAGAAAATTCAAAGCCACAAAAGGAAAGCTGGATTGCAGGAAATGAGAAGTAGGAAGGCCAAGAAGGTAGCTGGCAATGAAATTGTGTC
CAGATCGGCATCCACAAGTGCCATGAAGCAACCTGCGTCGGTAACCATTGAGAAACCCAGAAAGGCTAATGCCAAACCAACTAATCTTAATCTCCACCTCAAATATGGAGGGAACAAACAGAACCAGCCTTCGAATCTCCCAGAAGGCTGCAGGATGTCTAACGAAAGCTGCAGAAACGTGCCCCGTACTTCTGTCAAGA
GGAACAGCTCCAAAGGTGGATTGGGTCGTCGGTATAAGCTTGTCTCGGACGTGCTTTGCTTATAAACGAAAGGCAGACTTTTTTTAACATATTCCCAAGACAGAATTTCATGCTCAGACGTTTCTCTGGAGATCTGCAGTCTATTTTATGGCTCGACACAAGAACATACTATATACTGTAGCTGTATTAACTGTTTTTCT
TACTGTATATAACAGATATAAATTATAGAGCTCAGGAGTAACTCCATTTGAACTGTTTTGCCATTAATTTTCAAATCGCATGAGTTCAAATTCTCATTTAGCTATAAGTGAAAATGAGCGTTCTTAAGCAAAAAAGCAGCACACTCTGAGCCAACATTTTTGGCAATTGTTGTACAGCTTCCTGTCGTAATTATTGTTAA
GTTTTCGCAACGAACACAGTAGTGCAAGAATTAACAGTGGCCCACCAAGGCGCGACAACGCAACACAAGTAACCCGAGAGCCGTAGAATATAGTGGATTAATAGGTGGCGCTGCCAATTCGGTGGAGTAAGGATAAGAGAGTCACACCTGTGAATGGAAATGCCAATGAATTTTCTTTTGTCGTCGAGATGTTTAACATA
AATAATGCAGTATTTATGTTTTTAGATTTATTTGTTATGAACAGAAGCAAATTGATG
>TRINITY_DN37216_c0_g1_i1 from sample A6 / Example unspliced isoform:GTACGAAGCACAGTTGCGGTTGCAAGACTCTTACCGTTAAATCTCAGGGATTCCACATGACATTCTGGCGCAACAGCAAGAATTTGCCTTCTCTGCGCATTTTTCTTTTCCGAAACGGATGTTGCTTCTGCTAATCTTGACACTTGTGTAACAAGAATGCACACCATCAATTTGTCCTGCTCCGGGTAAAACCGGTGGCT
TGGTATCTCCAGCATCTTTCGCTCACACCAGGAACAGgtacatatagtctctcagcacttcaagtattgataatgtttgggaaaaagatccaccaacgcccttatcatgaccctgcgaatgtaataatctctgtttgaatcttggcctttttcaacgatctggttcatatgcttttcaataattttggatctatgctttg
atattcaatacgagcaaatacttgacaaatattaagtttacacaacataatgatgggatattgatggtgtctgctagTAACCTGGGCAAGCAGTCGTCCATTGAAAACAATCGCTGACGCTCGTCCATGGATCCCGAACGAAAGGAATTCGATTGTAGCTCCAGAAATACTAAGAATGACACAGAACGAGAATGCTGTAT
GTGTGGCGATGTTGGATTTCAGGAATACTTGTTCAGATGCCACAGATGCCACCACCGATTTCAGCACATATATTGCAGCAGGTTGTATTCTGATCAATTGGAATTAGACGGCGTAAATGTTTGTGACTGGTGCCTCGACTTCCAAGCAAGGCAGAAAATTCAAAGCCACAAAAGGAAAGCTGGATTGCAGGAAATGAGAA
GTAGGAAGGCCAAGAAGGTAGCTGGCAATGAAATTGTGTCCAGATCGGCATCCACAAGTGCCATGAAGCAACCTGCGTCGGTAACCATTGAGAAACCCAGAAAGGCTAATGCCAAACCAACTAATCTTAATCTCCACCTCAAATATGGAGGGAACAAACAGAACCAGCCTTCGAATCTCCCAGAAGGCTGCAGGATGTCT
AACGAAAGCTGCAGAAACGTGCCCCGTACTTCTGTCAAGAGGAACAGCTCCAAAGGTGGATTGGGTCGTCGGTATAAGCTTGTCTCGGACGTGCTTTGCTTATAAACGAAAGGCAGACTTTTTTTAACATATTCCCAAGACAGAATTTCATGCTCAGACGTTTCTCTGGAGATCTGCAGTCTATTTTATGGCTCGACACA
AGAACATACTATATACTGTAGCTGTATTAACTGTTTTTCTTACTGTATATAACAGATATAAATTATAGAGCTCAGGAGTAACTCCATTTGAACTGTTTTGCCATTAATTTTCAAATCGCATGAGTTCAAATTCTCATTTAGCTATAAGTGAAAATGAGCGTTCTTAAGCAAAAAAGCAGCACACTCTGAGCCAACATTTT
TGGCAATTGTTGTACAGCTTCCTGTCGTAATTATTGTTAAGTTTTCGCAACGAACACAGTAGTGCAAGAATTAACAGTGGCCCACCAAGGCGCGACAACGCAACACAAGTAACCCGAGAGCCGTAGAATATAGTGGATTAATAGGTGGCGCTGCCAATTCGGTGGAGTAAGGATAAGAGAGTCACACCTGTGAATGGAAA
TGCCAATGAATTTTCTTTTGTCGTCGAGATGTTTAACATAAATAATGCAGTATTTATGTTTTTAGATTTATTTGTTATGAACAGAAGCAAATTGATG