sp|Q9M8D3|PUR4_ARATH ----> Probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial

Intron 1 GTTGGTTTGT ... ATTCATGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	53.94	38	54	35
A2	36.59	26	21	9
A3	50	15	16	14
A4	78.26	5	17	19
A5	67.44	7	22	7
A6	6.67	7	0	1
A7	19.05	17	3	5
A8	0	12	0	0
A9	13.51	16	2	3
A10	5.88	16	1	1

>TRINITY_DN46691_c3_g1_i6 from sample A8 / Example spliced isoform

TTTAAAGACAGGAAACAATGCTATTAAGGCTCTCCAAAGTGAGATCAACTTGGATGATGTTCAAAAACTTATCGATGACACAGCTGACGCTAAAGTATACCAAGATGTACTTGGTGATATGCCACGAAAACGTCTTGAATTTACATGGAAAGTTCCACCACTTGGCATTGCTCCAGGAATGACAGTTTTGGATGCTCTCA
GACGAGCTCTCCATCTTCCACCCGTGTGTTCAAAGCGTTTCTTAACAACTAAGGTTGATCGTTGCCACAGATCTTGTTGCACAGCAGCAGACATTTAGTCCTCTGCAGCTTCCACTCGCAGATGTTGTTGTTATTGCTCAGACATATACTGGGTTAAGTGGTGGTGCCTGTGCAATTAGAGAGCAACCAGTAAAGGGTTT
ACTGAATCCAAAGGCAATGGCTAGGCTAGCAGTGGGGGAGGCTCTGGCAAATCTTGTTTGGGCTAAGGTTAATTCACTGAATGATGTCAAAGCTAGTGGGAATTGGATGTATGCTGCAAAGCTAGATGGAGAAGGTGCATCCATGTATGATGCAGCTAATGCTCTTCGGGATACAATAATAGAACTTGGGATAGCAATAG
ACGGTGGCAAAGACAGTCTTTCAATGGCTGCACAAGCTGGAGGAGAGACTGTTAAAGCTCCTGGCAATCTAGTAATCAGTGCTTATGTGACCTGTCTGGATATTTCAAAGACTGTTACACCAGACTTGAAGGTGACATTTCAAAATGGATTTGGACAAGCAACTCTAAGATTGTTAAGTCTTCATAATTGTCATACTGAC
ATAATCCACTGTTATGTAGCTAGGAGATGATGTACTTCTACTCCATATTGATTTGGCTAAAGGAAAGCACCGTTTAGGTGGTTCTGCCCTTGCTCATGTTTTTGACCAGGTAAATGCTAAAATATTTATTATTGGATTGGTGTATTTTTATTAGCAAAGGTCGATACATTATGCAGAGAACAATATATTATGAATGGTTG
GATGGACC

>TRINITY_DN46691_c3_g1_i9 from sample A8 / Example unspliced isoform:

TTTAAAGACAGGAAACAATGCTATTAAGGCTCTCCAAAGTGAGATCAACTTGGATGATGTTCAAAAACTTATCGATGACACAGCTGACGCTAAAGTATACCAAGATGTACTTGGTGATATGCCACGAAAACGTCTTGAATTTACATGGAAAGTTCCACCACTTGGCATTGCTCCAGGAATGACAGTTTTGGATGCTCTCA
GACGAGCTCTCCATCTTCCACCCGTGTGTTCAAAGCGTTTCTTAACAACTAAGGTTGATCGTTGCCACAGATCTTGTTGCACAGCAGCAGACATTTAGTCCTCTGCAGCTTCCACTCGCAGATGCTGTTGTTATTGCTCAGgttggtttgtattatatttgttgttatagctcagatgttgctgttattgcttctcacct
atttgtatttatattttctttcgagcttctttactgccttaatcatcttatggtttgagaagagtttctattgtctttaaactaaagtatactttcttttaatgttaatatatgacaacaatatgtctcattcatgcagACATATACTGGGTTAAGTGGTGGTGCCTGTGCAATTGGAGAGCAACCAGCAAAGGGTTTAC
TGAATCCAAAGGCAATGGCTAGGCTAGTAGTGGGGGAGGCTCTG

Intron 2 GTGAGGGCCT ... GTTTATTAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	56.32	5	6.6	6
A2	53.72	11.9	9.4	18
A3	54.53	9.5	14.1	8
A4	23.44	11.5	5.1	2
A5	30.91	5.5	1.1	4
A6	26.07	80	28.9	27
A7	42.04	47	36.9	30
A8	37.51	84.4	45.2	54
A9	29.58	74.8	27	35
A10	41.77	56.2	41.2	38

>TRINITY_DN130265_c4_g3_i3 from sample A1 / Example spliced isoform

CGCTCCTGTTTTCCCCGTTCTCATGTTTTTCCCTTGCTCATGTTTTAGAACAGATTGGTAATGTTTGCTCAGACCTTGATGATGTTTCATATCCTAAGAGAGTGTTCACTGCAATCTAGTGAATAAATTCAATGGCGCAAGAATGGTGCTTAACTAACGCTTATTGGATCAAGTCTCTAAGAACTGCTTGGAGAAAATCT
TGTGGTCATGACATTAGTGATGGTCGTTGTTTAGGTATACGAGGTTCTTGAGGTATATAAAATGCGACATGATGTCATGCTTCAGATTTTGTTTGGTAAGCTTGTATATGGAATCTATAGAACTCCATTTGAATCTGTCAAGAACTGTGAGTTTTTTTGTCATATTATGGTTTATAAGACACACAAATAACGCCTTCTTT
ACTGAACACTCCCATGAAATTTCAGCATTTTGTGATGTACCATCATTCTACTGATTTCAAGAATTCATCGAAAAGACCTTAACCAAGCGTCTCTTTTAATGCATCGGGCG

>TRINITY_DN130265_c4_g3_i1 from sample A1 / Example unspliced isoform:

CGCTCCTGTTTTCCCCGTTCTCATGTTTTTCCCTTGCTCATGTTTTAGAACAGGTAATTTATGATAAAATATTTCTTGTTGGATTGATGTCCTTTTATTAAGGAATATCGATACATTATGAAGAGAACAATATATTATGAATTGTTGGATGGACCATTTTGATTTCTTTCCTGTCATCACGTTTCATGATTAAAGCATTC
TTTATATTTTCAATGTTGTCTTGCAGATTGGTAATGTTTGCTCAGACCTTGATGATGTTTCATATCCTAAGAGAGTGTTCACTGCAATCTAGgtgagggcctaactaaatggtaattgaaaaccaaattatatttaataacagggtaaataatatgcttatcttattcaaccttttgtgtttattaagTGAATAAATTCA
ATGGCGCAAGAATGGTGCTTAACTAACGCTTATTGGATCAAGTCTCTAAGAACTGCTTGGAGAAAATCTTGTGGTCATGACATTAGTGATGGTCGTTGTTTAGGTATACGAGGTTCTTGAGGTATATAAAATGCGACATGATGTCATGCTTCAGATTTTGTTTGGTAAGCTTGTATATGGAATCTATAGAACTCCATTTG
AATCTGTCAAGAACTGTGAGTTTTTTTGTCATATTATGGTTTATAAGACACACAAATAACGCCTTCTTTACTGAACACTCCCATGAAATTTCAGCATTTTGTGATGTACCATCATTCTACTGATTTCAAGAATTCATCGAAAAGACCTTAACCAAGCGTCTCTTTTAATGCATCGGGCG

Intron 3 GTGAGGGCCT ... CGTTGTTTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	64.29	5	14	4
A2	58.14	9	12	13
A3	47.37	10	12	6
A4	42.86	8	7	5
A5	83.33	1	4	6
A6	44.5	53	14	71
A7	55.15	37	20	71
A8	54.34	50	25	94
A9	61.76	26	11	73
A10	58.18	23	26	38

>TRINITY_DN113712_c0_g1_i2 from sample A2 / Example spliced isoform

AACATTATTAAGTCCTCATAATTTTCATACGGACATAATCCACTGTTATGTAGCTAGGAGAAGATGGACTTCTACTCCATGTTGATTTGGCTAAAAGAAAGCAGTGTTTACATGGTTCTTCTCTCGCTCCTGTTTTCCCCGTTCTCATGTTTTTTCCCTTGCTCATGTTTTAGAACAGATTGGTAATGTTTGCTCAGACC
TTGATGATGTTTCATATCCTAAGAGAGTGTTCAATGCAATCTAGGTATACGAGGTTCTTGAGGTATATAAAATGCGACATGATGTCATGCTTCAGATTTTGTTTGGTATCTTTTTAATCTTTCCTTGGTGTTATCATCTTTCATGGACAGCAATGGGAGATTTGAGGATCAAATCTCATCAGTCGCTTTCCTGATGGCTT
TAGTGCAAAATTGCAATAAAGATTGAGAAAATAACTAACAGAGTTACTTTATAAAACTAGATACATCCCAGAGCTATTTGGTCGTGTCAAATTTCTTATGATCTCTTATTTTTTCTCTTTAAAATTTGGATAGTGGTGATTTGCAATCTTTTATAGTGGACGGTAGCACAAAATTATATAAAATTTACGAATTGACATCA
TTATGAATCTCTTTTTTAGTATCTCTGGTTCAAATAAGAAAAGATACAGAATGGACCATGAATCCCTTCAACTACCAAGTTGTAAGCCTGCATTGGAGAAGACTAAAAGAATTCAATTTTTCTACCATGAGTCCTCATTTTTTCTACTCAACAGAAAATTTCCTATTTTGTAAGACAAATTTTACTGCAATTCATATTT

>TRINITY_DN113712_c0_g1_i8 from sample A2 / Example unspliced isoform:

TTTGTTATCATTCTGCCTCCATGCTTTCTAAAACTCAAACTGTCTTAAGATATTTCAGAAGCCACAAGGGTTCGTGAGTGTTTTTATCAGAAGCAACGAAACCTTAAGGATTTAGGGTTCAAGCACGGTTCGATCTCAGTTTTATCAGAAGCCGCAAATCCTTAAGGGTTTAGGGTTCAAGAAGAGTTCATCCGAAGACT
TCCTGTTGGGTGACTTCGAAATTGAAGCTAGGAGATGATGGACTTCTACTCCATGTTGATTTGGCTAAAAGAAAGCAGTGTTTACATGGTTCTTCTCTCGCTCCTGTTTTCCCCGTTCTCATGTTTTTTCCCTTGCTCATGTTTTAGAACAGGTAATTTATGATAAAATATTTCTTGTTGGATTGATGTCCTTTTATTAA
GGAATATTGATACATTATGAAGAGAACAATATATTATGAATTGTTGGATGGACCATTTTGATTTCTTTCCTGTCATCACGTTTCATGATTAAAGCATTCTTTATATTTTCAATGTTGTCTTGCAGATTGGTAATGTTTGCTCAGACCTTGATGATGTTTCATATCCTAAGAGAGTGTTCAATGCAATCTAGgtgagggcc
taactaaatggtaattgaaaaccaaattatatttaataacagggtaaataatatgcttatcttattcaaccttttgtgtttattaagtgaataaattcaatggcgcaagaatggtgcttaactaacgcttattggatcaagtctctaagaactgcttggagaaaatcttgtggtcatgacattagtgatggtcgttgttt
agGTATACGAGGTTCTTGAGGTATATAAAATGCGACATGATGTCATGCTTCAGATTTTGTTTGGTAAGCTTGTATATGGAATCTATAGAACTCCATTTGAATCTGTCAAGAACTGTGAGTTTTTTTGTCATATTATGGTTTATAAGACACACAAATAACGCCTTCTTTACTGAACACTCCCATGAAATTTCAGCATTTTG
TGATGTACCATCATTCTACTGATTTCAAGAATTCATCGAAAGGACCTTAACCAAGCGTCTCTTTTAATGCATCAG

Intron 4 GTAATTTATG ... TGTCTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	86.78	2.8	6	30
A2	52.79	9.8	5.5	15.5
A3	46.71	9.8	3	11
A4	37.35	10.3	3.8	8.5
A5	43.89	7.5	5.3	4
A6	24.37	73.8	42.3	7
A7	30.74	59	33.8	19
A8	27.75	82.3	49.8	12.3
A9	23.54	56.5	31.8	3.8
A10	24.19	42	14.3	12.5

>TRINITY_DN130265_c4_g3_i3 from sample A1 / Example spliced isoform

CGCTCCTGTTTTCCCCGTTCTCATGTTTTTCCCTTGCTCATGTTTTAGAACAGATTGGTAATGTTTGCTCAGACCTTGATGATGTTTCATATCCTAAGAGAGTGTTCACTGCAATCTAGTGAATAAATTCAATGGCGCAAGAATGGTGCTTAACTAACGCTTATTGGATCAAGTCTCTAAGAACTGCTTGGAGAAAATCT
TGTGGTCATGACATTAGTGATGGTCGTTGTTTAGGTATACGAGGTTCTTGAGGTATATAAAATGCGACATGATGTCATGCTTCAGATTTTGTTTGGTAAGCTTGTATATGGAATCTATAGAACTCCATTTGAATCTGTCAAGAACTGTGAGTTTTTTTGTCATATTATGGTTTATAAGACACACAAATAACGCCTTCTTT
ACTGAACACTCCCATGAAATTTCAGCATTTTGTGATGTACCATCATTCTACTGATTTCAAGAATTCATCGAAAAGACCTTAACCAAGCGTCTCTTTTAATGCATCGGGCG

>TRINITY_DN130265_c4_g3_i1 from sample A1 / Example unspliced isoform:

CGCTCCTGTTTTCCCCGTTCTCATGTTTTTCCCTTGCTCATGTTTTAGAACAGgtaatttatgataaaatatttcttgttggattgatgtccttttattaaggaatatcgatacattatgaagagaacaatatattatgaattgttggatggaccattttgatttctttcctgtcatcacgtttcatgattaaagcattc
tttatattttcaatgttgtcttgcagATTGGTAATGTTTGCTCAGACCTTGATGATGTTTCATATCCTAAGAGAGTGTTCACTGCAATCTAGGTGAGGGCCTAACTAAATGGTAATTGAAAACCAAATTATATTTAATAACAGGGTAAATAATATGCTTATCTTATTCAACCTTTTGTGTTTATTAAGTGAATAAATTCA
ATGGCGCAAGAATGGTGCTTAACTAACGCTTATTGGATCAAGTCTCTAAGAACTGCTTGGAGAAAATCTTGTGGTCATGACATTAGTGATGGTCGTTGTTTAGGTATACGAGGTTCTTGAGGTATATAAAATGCGACATGATGTCATGCTTCAGATTTTGTTTGGTAAGCTTGTATATGGAATCTATAGAACTCCATTTG
AATCTGTCAAGAACTGTGAGTTTTTTTGTCATATTATGGTTTATAAGACACACAAATAACGCCTTCTTTACTGAACACTCCCATGAAATTTCAGCATTTTGTGATGTACCATCATTCTACTGATTTCAAGAATTCATCGAAAAGACCTTAACCAAGCGTCTCTTTTAATGCATCGGGCG

Intron 5 GTAAGCTTGT ... GAAATTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	71.72	3.6	9.1	9
A2	76.7	1.9	7.3	5
A3	100	0	8.9	4
A4	79.7	2.3	7.4	10
A5	96.43	0.1	2.6	3
A6	79	30	144.5	81
A7	80.43	16.4	80.1	55
A8	87.36	15.1	123.6	85
A9	83.9	14.8	96.8	57
A10	81.87	7.1	40.6	24

>TRINITY_DN98492_c0_g1_i14 from sample A4 / Example spliced isoform

GCGGGGGAAAGAAATTGGAGGAGTTTTGTTATCATTCTGCCTCCATGCTTTCTAAAACTCAAACTGTCTTAAGATATTTCAGAAGCCACAAGGGTTCGTGAGTGTTTTTATCAGAAGCAACGAAACCTTAAGGATTTAGGGTTCAAGCACGGTTCGATCTCAGTTTTATCAGAAGCCGCAAATCCTTAAGGGTTTAGGGT
TCAAGAAGAGTTCATCCGAGGACTTCCTGTTGGGTGACTTCCAAAATTGAAGATTGGTAATGTTTGCTCAGACCTTGATGATGTTTCATATCCTAAGAGAGTGTTCAATGCAATCTAGGTATACGAGGTTCTTGAGGTATATAAAATGCGACATGATGTCATGCTTCAGATTTTGTTTGCATTTTGTGATGTGCCATCAT
TCTACTGATTTCAAGAATTCATCGAAAAGACCTTAACCAAGCGTCTCTTTTAATGCATCGGGTATCTTTTTAATCTTTCCTTGGTGTTATCATCTTTCATGGACAACAATGGGAGATTTGAGGATCAAATCTCCTCAGTCGCTTTCCTGATGGCTTTAGTGCAAAATTGCAATAAAGATTGAGAAAATAACTAACAGAGT
TACTTTATAAAACTAGATACATCCCAGAGCTATTTGGTCGTGTCAAATTTCTTATGATCTCTTATTTTTTCTTTTTAAAATTTG

>TRINITY_DN98492_c0_g1_i8 from sample A4 / Example unspliced isoform:

GCGGGGGAAAGAAATTGGAGGAGTTTTGTTATCATTCTGCCTCCATGCTTTCTAAAACTCAAACTGTCTTAAGATATTTCAGAAGCCACAAGGGTTCGTGAGTGTTTTTATCAGAAGCAACGAAACCTTAAGGATTTAGGGTTCAAGCACGGTTCGATCTCAGTTTTATCAGAAGCCGCAAATCCTTAAGGGTTTAGGGT
TCAAGAAGAGTTCATCCGAGGACTTCCTGTTGGGTGACTTCCAAAATTGAAGGAGCAGATCATACATGATTTATAGGTTGCTTCAATGAATGATGTCAAAGCTAGTGGAAGGATGTACTCTAGTGGAAATTGAATGTATGCTGCAAAGCTAAATGGAAAAGGTGCATCCATGTATGATCCAACTAATCCTCTTTGGGATG
CAATGATAGAACTTGGAATAGAAATAGATGGTGGCAAAGATAGTCTTTCAATGGATGTACAAACTGGAGGAGAGATTGTCAAAACTCTTGGCAATCTAGTAATCAGTGCTTATGTGACTTGTTTAGATATTTCAAAAACTGTTACACCGGACTTGAAGGTGACATTTCAAAATGGATTTGGACAAGTATCTCTAACATTA
TTAAGTCCTCATAATTTTCATACGGACATAATCCACTGTTATGTAGCTAGGAGAAGATGGACTTCTACTCCATGTTGATTTGGCTAAAAGAAAGCAGTGTTTACATGGTTCTTCTCTCGCTCCTGTTTTCCCCGTTCTCATGTTTTTTCCCTTGCTCATGTTTTAGAACAGATTGGTAATGTTTGCTCAGACCTTGATGA
TGTTTCATATCCTAAGAGAGTGTTCAATGCAATCTAGGTATACGAGGTTCTTGAGGTATATAAAATGCGACATGATGTCATGCTTCAGATTTTGTTTGgtaagcttgtatatggaatctatagaactccatttgaatctgtcaagaactgtgagtttttttgtcatattatggtttataagacacacaaataacgccttc
tttactgaacactcccatgaaatttcagCATTTTGTGATGTGCCATCATTCTACTGATTTCAAGAATTCATCGAAAAGACCTTAACCAAGCGTCTCTTTTAATGCATCGGGTATCTTTTTAATCTTTCCTTGGTGTTATCATCTTTCATGGACAACAATGGGAGATTTGAGGATCAAATCTCCTCAGTCGCTTTCCTGAT
GGCTTTAGTGCAAAATTGCAATAAAGATTGAGAAAATAACTAACAGAGTTACTTTATAAAACTAGATACATCCCAGAGCTATTTGGTCGTGTCAAATTTCTTATGATCTCTTATTTTTTCTTTTTAAAATTTG

Intron 6 GTGAGTATAT ... TCTTATACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	51.52	8	7	10
A2	54.55	5	4	8
A3	50	5	3	7
A4	36.84	6	4	3
A5	41.67	7	3	7
A6	26.47	25	2	16
A7	42.55	27	11	29
A8	42.17	24	7	28
A9	33.33	19	3	16
A10	39.13	35	18	27

>TRINITY_DN48693_c1_g1_i5 from sample A10 / Example spliced isoform

CTGGAGATAAGAATAAAAGAATGGAGGAACAACTCTGTGTTTTTTTCTTCTGGATTAGAGAATAAAAGTTTTGAGCAACATCTTTGAGAACAAAATCTAGAGATCTGTGCTAGAGATGCTAGGCGTGTCACTGTTGAATACTGAGGGAAATGTAATATCCAATTGCGAATAGAGGAATATCGTATCCACAATCATAGTGG
AAGAATCTGTCTTGGAGTTTCAAGATCTGAGTTGAATCTGTATGAAGATGTGGAAAAGAATTATCATGCTGTAAGCTAGCCTAAGGGAGAGAAATAGATGCAACAACATTGAAGAAGATAGTGTGGAGAGTCACAATTCCAACATCGATCCACAGTGATGTGATGAAGCGAGCCATTACAAGATGGAGAAATTTTCCAGG
AATGCAGTGTTGTCATGAAAGAAGGGAAGTCATGTGTCAAGAAGCAATAATGGAATGTTGAAGCTACCTCTTATTGAATGGAGTAGCTTAGAACCACATGCCCACTTGAAAGGTAAAAATGTCACCTCTTTATTCATGTGAACAGATTTGAAAACTTGAGCACTGTATATTAATGGCAAGGTTGAGATAATATGAATCGT
GCTAACATTGATGGCATGGTTGAAGTTTTTTTTTAAGTGAATTGACAAATTACCTTCTTAAGGTCAATGTCAATTGTTGGAAGAGGACTGCCGAAAGAGGAGGGGGTGGACCATTTAAAATAGAATGCTCCATTTCCAAGCTGTAGAATCTCAGAATTTTTAAATTTTGAGGGTTTACTGAATCCCGAAGGTATTGGATA
GGCTAGCTGGGGGAGGCTCTAACAATTACTGTTTGTCTAAGGAGCAGATCATACATGATTTATAGGTTGCTTCAATGAATGATGTCAAAGCTAGTGGAAGGATGTACTCTAGTGGAAATTGAATGTATGCTGCAAAGCTAAATGGAAAAGGTGCATCCATGTATGATCCAACTAATCCTCTTTGGGATGCAATGATAGAA
CTTGGAATAGAAATAGATGGTGGCAAAGATAGTCTTTCAATGGATGTACAAACTGGAGGAGAGATTGTCAGAACTCCTGGCAATCTAGTAATCAGTGCTTATGTGACTTGTTTAGATATTTCAAAAACTATTACACCAGACTTGAAGCTAGGAGATGATGGACTTCTACTCCATGTTGATTTGGCTAAAAGAAAGCAGTG
TTTACATGGTTCTTCTCTTGCTCCTGTTTTCCCCGTTCTCATGTTTTTCCCTTGCTCATGTTTTAGAACAGATTGGTAATGTTTGCTCAGACCTTGATGATGTTTCATATCCTAAGAGAGTGTTCACTGCAATCTAGTGAATAAATTCAATGGCGCAAGAATGGTGCTTAACTAACGCTTATTGGATCAAGTCTCTAAGA
ACTGCTTGGAGAAAATCTTGTGGTCATGACATTAGTGATGGTCGTTGTTTAGGTATACGAGGTTCTTGAGGTATATAAAATGCGACATGATGTCATGCTTCAGATTTTGTTTGGTAAGCTTGTATATGGAATCTATAGAACTCCATTTGAATCTGTCAAGAACTGTGAGTTTTTTTGTCATATTATGGTTTATAAGACAC
ACAAATAACGCCTTCTTTACTGAACACTCCCATGAAATTTCAGCATTTTGTGATGTACCATCATTCTACTGATTTCAAGAATTCATCGAAAAGACCTTAACCAAGCGTCTCTTTTAATGCATCAGGTATCTTTTTAATCTTTCCTTGGTGTTATCATCTTTCATGGACAGCAATGGGAGATTTGAGGATCAAATCTCATC
AGTCGCTTTCCTGATGGCTTTAGTGCAAAATTGCAATAAAGATTGAGAAAATAACTAACAGAGTTACTTTATAAAACTAGATACATCCCAGAGCTATTTGGTCGTGTCAAATTTCTTATGATCTCTTATTTTTTCTCTTTAAAATTTGGATAGTGGTGATTTGCAATCTTTTATAGTGGACGGTAGCACAAAATTATATA
AAATTTACGAATTGACATCATTATGAATCTCTTTTTTAGTATCTCTGGTTCAAATAAGAAAAGATACAGAATGGACCATGAATCCCTTCAACTACCAAGTTGTAAGCCTGCATTGGAGAAGACTAAAAGAATTCAATTTTTCTACCATGAGTCCTCATTTTTTCTACTCAACAGAAAATTTCCTATTTTGTAAGACAAAT
TTTACTG

>TRINITY_DN48693_c1_g1_i11 from sample A10 / Example unspliced isoform:

CTGGAGATAAGAATAAAAGAATGGAGGAACAACTCTGTGTTTTTTTCTTCTGGATTAGAGAATAAAAGTTTTGAGCAACATCTTTGAGAACAAAATCTAGAGATCTGTGCTAGAGATGCTAGGCGTGTCACTGTTGAATACTGAGGGAAATGTAATATCCAATTGCGAATAGAGGAATATCGTATCCACAATCATAGTGG
AAGAATCTGTCTTGGAGTTTCAAGATCTGAGTTGAATCTGTATGAAGATGTGGAAAAGAATTATCATGCTGTAAGCTAGCCTAAGGGAGAGAAATAGATGCAACAACATTGAAGAAGATAGTGTGGAGAGTCACAATTCCAACATCGATCCACAGTGATGTGATGAAGCGAGCCATTACAAGATGGAGAAATTTTCCAGG
AATGCAGTGTTGTCATGAAAGAAGGGAAGTCATGTGTCAAGAAGCAATAATGGAATGTTGAAGCTACCTCTTATTGAATGGAGTAGCTTAGAACCACATGCCCACTTGAAAGGTAAAAATGTCACCTCTTTATTCATGTGAACAGATTTGAAAACTTGAGCACTGTATATTAATGGCAAGGTTGAGATAATATGAATCGT
GCTAACATTGATGGCATGGTTGAAGTTTTTTTTTAAGTGAATTGACAAATTACCTTCTTAAGGTCAATGTCAATTGTTGGAAGAGGACTGCCGAAAGAGGAGGGGGTGGACCATTTAAAATAGAATGCTCCATTTCCAAGCTGTAGAATCTCAGAATTTTTAAATTTTGAGGGTTTACTGAATCCCGAAGGTATTGGATA
GGCTAGCTGGGGGAGGCTCTAACAATTACTGTTTGTCTAAGgtgagtatatcatgtcaaaaattttctttctcaagacgatctttccaatattctgttggtcatttcggcaatcttaggtgaaaagagtcattattaaacataatggaagtataaagcatatgttttccttaataaagatatttggtcttatacagGAGC
AGATCATACATGATTTATAGGTTGCTTCAATGAATGATGTCAAAGCTAGTGGAAAGGATGTACTCTAGTGGAAATTGAATGTATGCTGCAAAGCTAAATGGAAAAGGTGCATCCATGTATGATCCAACTAATCCTCTTTGGGATGCAATGATAGAACTTGGAATAGAAATAGATGGTGGCAAAGATAGTCTTTCAATGGA
TGTACAAACTGGAGGAGAGATTGTCA