NA ----> NA


Intron 1 GTGCAACGTT ... TTGTTTAAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A166.2817334091
A264.52176320110
A364.9613725499
A461.21192303123
A571.645714484
A65031231261
A761.01301471106
A850.86256265108
A951.98316342105
A1057.19268358116



>TRINITY_DN113290_c1_g1_i2 from sample A5 / Example spliced isoform
CCACCCTCCGCCAGATCACTTTCATTCGTATTTCTCCCACCATTCCCTTCATTGGGATGGGAGGGGAAATTGCGATGGATGGTGATCCTTCTCCTCTCAAGGGTCTGTATAGGTCTCTTGGTTTGCCAATCGGCTATCGAATTCGCCCACAGAGATATAGTATTACACAGCTTTCGAGTTTTCATTTCAATTTCTGTGTC
TTACGTTTGTTTCCTTGTCGATTGAAAGCGTTCAGCAATTGGGATTTGCTTAACAGGATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTTTCAGGTATTTGTTCAAGAGATACCTGTAGTTCAGTTTTTTTTGAGGATGGGCTGGATTTGCATAAAAATTGTTGACATATATTT


>TRINITY_DN113290_c1_g1_i1 from sample A5 / Example unspliced isoform:
GCAATTGGGATTTGCTTAACAGGTGCAACGTTTGTCGGCAATATTTTTGGTAGTTTTAAAATTAACATTATTTGTGTTGATTATATTCATGGCAGACTCGTGATCATTATTTGGTGCTTTCTTTCTCTAATTTCACCGGTTCTCTTCTCTGTTCCCGTTGAATCTTTTATTTTATTTTTCCATGTCCCATTCTGACTGTT
AATTTTGGATGAGGTGTCTATTGGGAATGGGGTTTCTTTGAAGCTATTATATAATTGCGATTATTTTTCATGGAACCTCTCCTTGTTTGCTTAAAGGATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTTTCAGGTATTTGTTCAAGAGATACCTGTAGTTCAGGTATTTGGTTTGCCAATCGGCTATCGA
ATTCGCCCACAGAGATATAGTATTACACAGCTTTCGAGTTTTCATTTCAATTTCTGTGTCTTACGTTTGTTTCCTTGTCGATTGAAAGCGTTCACGCAATTGGGATTTGCTTAACAGgtgcaacgtttgtcggcaatatttttggtagttttaaaattaacattatttgtgttgattatattaatggcagactcgtgatt
ataccatttcattgcgttggtgctttctttctctaatttttccatgtccaattctgattgttaattttggatgaggtgtctattgtggatggggtttctttgaagctattatataattgtgattatttttcatggaacctctccttgtttgtttaaag
GATATGGATTACTCGAACATGGCAGACTAGTGATCATACCAT
TTCATTGCGTTGGTGCCTGTTCAGCAATTCCAGGGCATTTTTTCAGGTATTTGTTCAAGAGATACCTGTAGTTCAGTTTTTTTTGAGGATGGGCTGGATTTGCATAAAAATTGTTGACATATATTT




Intron 2 GTAGGTATCT ... TGTTACACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A167.693711441
A262.44409241
A355.69377221
A459.78377832
A565.22205619
A683.752316473
A769.316020071
A871.924115654
A976.323617854
A1079.43116475



>TRINITY_DN46775_c3_g1_i10 from sample A8 / Example spliced isoform
ACCCCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGGACTAGTGATCATACCATTTCATTGCGTTGGTGCTTTCTTTCTTTAATTTCACCGGTTCTCTTCTCTGTTCCCGTTGAATCTTTTATTTTATTTTTCCATGT
CCAATTCTGACTGTTAATTTTGGATGAGGTTTCTATTGGGAATGGGGTTTCTTTGAAGCTATTA


>TRINITY_DN46775_c3_g1_i5 from sample A8 / Example unspliced isoform:
ATCTTTTCTAGCTTCCTTGTTAATCACGTTCGTCCATCTTCTTTCACGGTTTCATCTGCACCGCCCACTAGCCCTGGCCGCCTATAAATTGACAAGCTCCAACCCCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGG


gtaggtatctctactttgttcattcctcccttgcattataggtctcttggtttgcagatcggctatcgagttcgcccacagagatatagtgttacacag
ACTAGTGATCATACCATTTCATTGCGTTGGTGCTTTCTTTCTTTAATTTCACCGGATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTTCAGA
AGAAGGGAGTATGAAAGCCCATCCTTTACAGAAATCAGACAAGGGAGAGGTCATACAGGGGGTTTGTGTTAAGCATCTGTTGCGGCATTTCATTTAGTGGCCCTATAATTGTCTTCAACGAAATAAATTAGTGGAAGCTTTTCCTTCATCTGATTTGCATTTTCTCAAGTTATTATCAGGCGGAAGGAATTTGGATTATG
TTTTATAATTAT




Intron 3 GTCTGTATCT ... TGCTTAACAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A193.948125123
A2100072145
A310006896
A498.28287141
A597.9614947
A695.6787217
A796.846142226
A897.78399165
A996.836138229
A1097.255141213



>TRINITY_DN48016_c0_g1_i10 from sample A10 / Example spliced isoform
CATTTTCAAGAAAAGAATGGAATCCGAAGCACGCGATCGGGAGAAAAGAATGGCATCCGATGCACGAGATTTCGTAATCATTATTGCCTTTTTAAAAAATCTTTTCTAGCTTCCTTGTTAATCACGTTCGTCCATCTTCTTTCACGGTTTCATCTGCACCGCCCACTAGCCCTGGCCGCCTATAAATTGACAAGCTCCAC
CCCCGGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGGGATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTTCAGAAGAAGGTTCGC


>TRINITY_DN48016_c0_g1_i5 from sample A10 / Example unspliced isoform:
CATTTTCAAGAAAAGAATGGAATCCGAAGCACGCGATCGGGAGAAAAGAATGGCATCCGATGCACGAGATTTCGTAATCATTATTGCCTTTTTAAAAAATCTTTTCTAGCTTCCTTGTTAATCACGTTCGTCCATCTTCTTTCACGGTTTCATCTGCACCGCCCACTAGCCCTGGCCGCCTATAAATTGACAAGCTCCAA
CCCCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGGgtctgtatctctactttgttcatccctccctttgccaatcggctatcgagttcgcccacagagatatagtattacacaggtttcgagttttcatttcaatgt
ctgtatcttacgtttgtttccatgtcgattgaaagcgttcagcaattgggatttgcttaacag
GATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTTCAGAAGAAGGTTCGC




Intron 4 GTTTTGAGTT ... TTCATGGCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A188.2741269348
A287.5841263315
A392.4121214297
A490.0532279300
A588.8919122182
A678.0573331188
A785.9771421449
A882.1854246252
A985.3554314315
A1081.7175322348



>TRINITY_DN46775_c3_g1_i5 from sample A8 / Example spliced isoform
ATCTTTTCTAGCTTCCTTGTTAATCACGTTCGTCCATCTTCTTTCACGGTTTCATCTGCACCGCCCACTAGCCCTGGCCGCCTATAAATTGACAAGCTCCAACCCCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGG
GTAGGTATCTCTACTTTGTTCATTCCTCCCTTGCATTATAGGTCTCTTGGTTTGCAGATCGGCTATCGAGTTCGCCCACAGAGATATAGTGTTACACAGACTAGTGATCATACCATTTCATTGCGTTGGTGCTTTCTTTCTTTAATTTCACCGGATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTTCAGA
AGAAGGGAGTATGAAAGCCCATCCTTTACAGAAATCAGACAAGGGAGAGGTCATACAGGGGGTTTGTGTTAAGCATCTGTTGCGGCATTTCATTTAGTGGCCCTATAATTGTCTTCAACGAAATAAATTAGTGGAAGCTTTTCCTTCATCTGATTTGCATTTTCTCAAGTTATTATCAGGCGGAAGGAATTTGGATTATG
TTTTATAATTAT


>TRINITY_DN46775_c3_g1_i4 from sample A8 / Example unspliced isoform:
ATCTTTTCTAGCTTCCTTGTTAATCACGTTCGTCCATCTTCTTTCACGGTTTCATCTGCACCGCCCACTAGCCCTGGCCGCCTATAAATTGACAAGCTCCAACCCCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGG
GTAGGTATCTCTACTTTGTTCATTCCTCCCTTGCATTATAGGTCTCTTGGTTTGCAGATCGGCTATCGAGTTCGCCCACAGAGATATAGTGTTACACAGgttttgagttttcatttcaatttctgtgtcttacgtttgtttccatgtcgattgaaaacgttcagcaattgggatttgcttaacaggtgcaacgtttgtcg
gcaatatttttggtagttttaaaattaacattatttgtgttgattatattcatggcag
ACTAGTGATCATACCATTTCATTGCGTTGGTGCTTTCTTTCTTTAATTTCACCGGTTCTCTTCTCTGTTCCCGTTGAATCTTTTATTTTATTTTTCCATGTCCAATTCTGACTGTTAATTTTGGATGAGGTTTCTATTGGGA
ATGGGGTTTCTTTGAAGCTATTA




Intron 5 GTGCAACGTT ... TTGTTTAAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A163.2113216.8163.5
A261.18124204167.5
A366.8883.5178.5152
A462.41121187.5193.3
A571.9844.3111.3114
A642.47194.8174.898.3
A757.05195324.8174.3
A854.39141.8172157.8
A948.84205.5217.3163.5
A1054.16186.3230.3194.5



>TRINITY_DN125558_c3_g3_i7 from sample A2 / Example spliced isoform
GGAGAAAAGAATGGAATCCGATGCACGCGATTGGGAGAAAAGAATGGCATCCGATGCACGCGATTTCATAATCATTACCGCCTTTTTCATAATCATTATCGCCTTTTTTAAAAATCTTTTCTAGCTTTTCCTTGTTAATCACGTTCGTCCATCTTCTTCCACTATTTCATCTGCACCGTCCACTAGCCCTGGCCGCCTAT
AAATTGACAAGCTCCACCCTCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCATTGGGATGGGAGGGGAAATTGCGATGGATGGTGATCCTTCTCCTCTCAAGGGTCTGTATAGGTCTCTTGGTTTGCCAATAGGCTATCGAATTCGCCCACAGAGATATAGTATTACACAGCTTTCGAGTTTTCATTT
CAATTTCTGTGTCTTACGTTTGTTTCCTTGTCGATTGAAAGCGTTCAGCAATTGGGATTTGCTTAACAGGATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTCCAG


>TRINITY_DN125558_c3_g3_i6 from sample A2 / Example unspliced isoform:
ATCGAGTTTTCATTTCAATTTCGAGTTTTCATTTCAATTTCTGTGTCTTACGTTTGTTTCCTTGTCGATTGAAAGCGTTCAGCAATTGGGATTTGCTTAACAGgtgcaacgtttgtcggcaatattttggtagttttaaaatttacattatttgtgttgattatattcgtggcagactcgtgattataccatttcattgc
gttggtgctttctttctctaatttcaccggttctcttctctgttcccgttgaatcttttattttatttttccatgtccaattctgactgttaattttggatgaggtgtctattgtggatggggtttctttgaagctattatataattgcgattatttttcatggaacctctccttgtttctttgaag
GATATGGATTACT
CGACCTGTTCAGCAATTCCAGGGCATTTTCCAG




Intron 6 GTCTGTATCT ... TTGTTTAAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A194.568125153
A2100072157
A3100068131
A498.55287185
A598.77149111
A692.8978796
A796.146142157
A897.66399151
A996.086138156
A1096.935141175



>TRINITY_DN48016_c0_g1_i10 from sample A10 / Example spliced isoform
CATTTTCAAGAAAAGAATGGAATCCGAAGCACGCGATCGGGAGAAAAGAATGGCATCCGATGCACGAGATTTCGTAATCATTATTGCCTTTTTAAAAAATCTTTTCTAGCTTCCTTGTTAATCACGTTCGTCCATCTTCTTTCACGGTTTCATCTGCACCGCCCACTAGCCCTGGCCGCCTATAAATTGACAAGCTCCAC
CCCCGGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGGGATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTTCAGAAGAAGGTTCGC


>TRINITY_DN48016_c0_g1_i14 from sample A10 / Example unspliced isoform:
CATTTTCAAGAAAAGAATGGAATCCGAAGCACGCGATCGGGAGAAAAGAATGGCATCCGATGCACGAGATTTCGTAATCATTATTGCCTTTTTAAAAAATCTTTTCTAGCTTCCTTGTTAATCACGTTCGTCCATCTTCTTTCACGGTTTCATCTGCACCGCCCACTAGCCCTGGCCGCCTATAAATTGACAAGCTCCAA
CCCCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGGgtctgtatctctactttgttcatccctccctttgccaatcggctatcgagttcgcccacagagatatagtattacacaggtttcgagttttcatttcaatgt
ctgtatcttacgtttgtttccatgtcgattgaaagcgttcagcaattgggatttgcttaacaggtgcaacgtttgtcggcaatattttggtagttttaaaatttacattatttgtgttgattatattcgtggcagactcgtgatcataccatttcattgcgttggtgctttctttctctaatttcaccggttctcttctc
tgttcccgttgaatcttttattttatttttccatgtccaattctgattgttaattttggatgaggtgtctattgtggatggggtttctttgaagctattgtataattgcgattatttttcatggaacctctccttgtttgtttaaag
GATATGGATTACTCGAACTGTTCAGCAATTCCAGGGCATT




Intron 7 GTGCAACGTT ... TTGCTTAAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A168.0817370369
A265.8917670340
A367.6913763287
A462.6519271322
A577.915744201
A637.131256184
A754.87301103366
A853.6225650296
A952.6231670351
A1058.4526872377



>TRINITY_DN113290_c1_g1_i2 from sample A5 / Example spliced isoform
CCACCCTCCGCCAGATCACTTTCATTCGTATTTCTCCCACCATTCCCTTCATTGGGATGGGAGGGGAAATTGCGATGGATGGTGATCCTTCTCCTCTCAAGGGTCTGTATAGGTCTCTTGGTTTGCCAATCGGCTATCGAATTCGCCCACAGAGATATAGTATTACACAGCTTTCGAGTTTTCATTTCAATTTCTGTGTC
TTACGTTTGTTTCCTTGTCGATTGAAAGCGTTCAGCAATTGGGATTTGCTTAACAGGATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTTTCAGGTATTTGTTCAAGAGATACCTGTAGTTCAGTTTTTTTTGAGGATGGGCTGGATTTGCATAAAAATTGTTGACATATATTT


>TRINITY_DN113290_c1_g1_i1 from sample A5 / Example unspliced isoform:
GCAATTGGGATTTGCTTAACAGgtgcaacgtttgtcggcaatatttttggtagttttaaaattaacattatttgtgttgattatattcatggcagactcgtgatcattatttggtgctttctttctctaatttcaccggttctcttctctgttcccgttgaatcttttattttatttttccatgtcccattctgactgtt
aattttggatgaggtgtctattgggaatggggtttctttgaagctattatataattgcgattatttttcatggaacctctccttgtttgcttaaag
GATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTTTCAGGTATTTGTTCAAGAGATACCTGTAGTTCAGGTATTTGGTTTGCCAATCGGCTATCGA
ATTCGCCCACAGAGATATAGTATTACACAGCTTTCGAGTTTTCATTTCAATTTCTGTGTCTTACGTTTGTTTCCTTGTCGATTGAAAGCGTTCACGCAATTGGGATTTGCTTAACAGGTGCAACGTTTGTCGGCAATATTTTTGGTAGTTTTAAAATTAACATTATTTGTGTTGATTATATTAATGGCAGACTCGTGATT
ATACCATTTCATTGCGTTGGTGCTTTCTTTCTCTAATTTTTCCATGTCCAATTCTGATTGTTAATTTTGGATGAGGTGTCTATTGTGGATGGGGTTTCTTTGAAGCTATTATATAATTGTGATTATTTTTCATGGAACCTCTCCTTGTTTGTTTAAAGGATATGGATTACTCGAACATGGCAGACTAGTGATCATACCAT
TTCATTGCGTTGGTGCCTGTTCAGCAATTCCAGGGCATTTTTTCAGGTATTTGTTCAAGAGATACCTGTAGTTCAGTTTTTTTTGAGGATGGGCTGGATTTGCATAAAAATTGTTGACATATATTT




Intron 8 GTGCAACGTT ... TTCTTTGAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A163.86109.7209167
A262.53117182183
A368.0579.3169161
A462.84114.3163196
A571.6543.3104112
A641.98187.3145101
A757.39184.7294178
A854.99134152164
A948.57197.7188168
A1054.75177.3208200



>TRINITY_DN125558_c3_g3_i7 from sample A2 / Example spliced isoform
GGAGAAAAGAATGGAATCCGATGCACGCGATTGGGAGAAAAGAATGGCATCCGATGCACGCGATTTCATAATCATTACCGCCTTTTTCATAATCATTATCGCCTTTTTTAAAAATCTTTTCTAGCTTTTCCTTGTTAATCACGTTCGTCCATCTTCTTCCACTATTTCATCTGCACCGTCCACTAGCCCTGGCCGCCTAT
AAATTGACAAGCTCCACCCTCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCATTGGGATGGGAGGGGAAATTGCGATGGATGGTGATCCTTCTCCTCTCAAGGGTCTGTATAGGTCTCTTGGTTTGCCAATAGGCTATCGAATTCGCCCACAGAGATATAGTATTACACAGCTTTCGAGTTTTCATTT
CAATTTCTGTGTCTTACGTTTGTTTCCTTGTCGATTGAAAGCGTTCAGCAATTGGGATTTGCTTAACAGGATATGGATTACTCGACCTGTTCAGCAATTCCAGGGCATTTTCCAG


>TRINITY_DN125558_c3_g3_i1 from sample A2 / Example unspliced isoform:
ATCGAGTTTTCATTTCAATTTCGAGTTTTCATTTCAATTTCTGTGTCTTACGTTTGTTTCCTTGTCGATTGAAAGCGTTCAGCAATTGGGATTTGCTTAACAGgtgcaacgtttgtcggcaatatttttggtagttttaaaatttacattatttgtgttgattatattcatggcagactagtgatcataccatttcattg
cgttggtgctttctttctctaatttcaccggttctcttctctgttcccgttgaatcttttattttatttttccatgtccaattctgactgttaattttggatgaggtgtctattgggaatggggtttctttgaagctattatataattgcgattatttttcatggaacctctccttgtttctttgaag
GATATGGATTAC
TCGACCTGTTCAGCAATTCCAGGGCATTTTCCAG




Intron 9 GTAGGTATCT ... TTCATGGCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A187.3137161348
A284.7640130315
A384.2937100297
A484.8437114300
A586.622077182
A68923184188
A785.4760257449
A884.0541180252
A988.0836217315
A1089.731192348



>TRINITY_DN46775_c3_g1_i10 from sample A8 / Example spliced isoform
ACCCCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGGACTAGTGATCATACCATTTCATTGCGTTGGTGCTTTCTTTCTTTAATTTCACCGGTTCTCTTCTCTGTTCCCGTTGAATCTTTTATTTTATTTTTCCATGT
CCAATTCTGACTGTTAATTTTGGATGAGGTTTCTATTGGGAATGGGGTTTCTTTGAAGCTATTA


>TRINITY_DN46775_c3_g1_i4 from sample A8 / Example unspliced isoform:
ATCTTTTCTAGCTTCCTTGTTAATCACGTTCGTCCATCTTCTTTCACGGTTTCATCTGCACCGCCCACTAGCCCTGGCCGCCTATAAATTGACAAGCTCCAACCCCCGCCAGATCACATTCATTCGTCTTTCTCCCACCATTCCCTTCTTTGGGATGGGAGGAGAAATTGCGATGTATGGTGATCCTTCTCCTCTGAAGG


gtaggtatctctactttgttcattcctcccttgcattataggtctcttggtttgcagatcggctatcgagttcgcccacagagatatagtgttacacaggttttgagttttcatttcaatttctgtgtcttacgtttgtttccatgtcgattgaaaacgttcagcaattgggatttgcttaacaggtgcaacgtttgtcg
gcaatatttttggtagttttaaaattaacattatttgtgttgattatattcatggcag
ACTAGTGATCATACCATTTCATTGCGTTGGTGCTTTCTTTCTTTAATTTCACCGGTTCTCTTCTCTGTTCCCGTTGAATCTTTTATTTTATTTTTCCATGTCCAATTCTGACTGTTAATTTTGGATGAGGTTTCTATTGGGA
ATGGGGTTTCTTTGAAGCTATTA