sp|Q9LZ08|MOS11_ARATH ----> Protein MODIFIER OF SNC1 11
Intron 1 GTAAAATCTA ... TTTATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.02 | 341 | 102 | 0 |
| A2 | 19.35 | 362.5 | 87 | 0 |
| A3 | 21.76 | 356 | 99 | 0 |
| A4 | 20.29 | 275 | 70 | 1 |
| A5 | 23.65 | 190.5 | 59 | 2 |
| A6 | 23.64 | 1441 | 446 | 0 |
| A7 | 24.12 | 1372 | 436 | 0 |
| A8 | 20.7 | 862 | 225 | 0 |
| A9 | 23.87 | 1087.5 | 341 | 0 |
| A10 | 22.95 | 893 | 266 | 0 |
>TRINITY_DN100782_c9_g1_i4 from sample A4 / Example spliced isoformTATATATATATATATGAGTAGACTTTGCATATTATGTGTCTAATGGTTTGAAATCATAGCTTGGAATGTTAAATATAATTTTTATGATTAAAATTGTAATTTTTTTGTATTTTTTAATAGTCTGGTTCATTGAAATCAAACCGCTCCGGTTCATTACCGGTTCCGGTTCCGGTCCGAGTTGACCCCAGACCGGTTTGATT
CCCGGTTCCGGTTATTAAAACATTGGGTGCTACTGGACTTCTTTGTCTTTTGAAGTCTTATGGCCCCCCGATCTTATGCTCAGTTAATATGTTTCGTCTTTTAATTAGCTACGTTTGTGTCTGCTTTATTTTCAGATTTGGTGAGTCAGCAAATGGTACTCCAAAGCCTACCTCTCCTGGACTAGGAGAAGCAAAAGCAT
TGGAAGAAGAAAAGAGGAAAGCCAGGGCCGAGAGGTTTGGGCTTGCTTTGCGTTCATCTGCTGATGATGAAGCAAAGAAGAAAGCTCGTTTAGCTAGATTTGGAGTGGATGTGAAATCTGCTTCCTTGGAAGATGAGAAGAAAAAAACAAGGGCTGCAAGGTTTGCTCCGACACTGGATGGAAGTACTTCAGAAGTAAAC
AAAAAACTAAAACTAGACCTGGCAGGGACTGTGTCATCAACATAAATGGTTTTGGGATAGTCTGAGGCAAATACACACTTCCTGTTGCAGCACACAGCGGAGTCAAGTGGGGCAGCATTAGATATTGGATATGATAAAAAAATAGGCTAGTGGGGCTAGAATTTGTATTAAATTTTGGATGCATTCAGTTGAAGGTTATG
CATTAGTTTTCTTTTTATATTTGCTAGATTTCTTGTTTTTGTTGTTTTTTACCACATTTTGATTTGTTGCGACCCTACTCATTTGCTCCTTTTAGCTTTCTCTTGATCCCCTTCTCGTTTAGCTTACTCTTTTCTGTCCCCTCTTAATTTAGTATTTTGTAAGGGCCACATTTATGTAGAAGCTTAATTGTGTTTTGAAT
CATTTTTATTATTGTCGTGGCTGCCTAGGCTTGTAACCATCTTTGTTTCAACTTTAAACTTTCTCTCATCTGCAAGGTCAAATTGTCTCTGGTTTTGATTTGATTTGCTCATTTATCTACCCTCTTAACTTTATTGAAATGTCCTAGTCAGATTGGGAATATCAATTTTCAAGCAGAAGTAAAATGGTAAAGAGAATTTG
TACCAGAGCATGTGAACTTCAAAATTGATATTTTGCTGGTCACTTAATTACTGTGGTGCTTTTAATTTCTGCCAATTTTCGCTTTTAAAATCTGCTGAAATGTCATCATTGGCTATCACACTTCTGATCAGTTATACTCAGTTTCACTACGTCTTTATTTTTCATTTCCTTTATATCTGTTGTGTTACTCTACTTCTCTC
CTTTTGTCTATATTTGGGGATCCTTTTCTTTTACGTTATCTCACTTTTGATCAGTTATACTCAGTTTCATTCCATCTTTATTTTTCATTTCTGTGCCTTTTAGTCTTTTTGGACATTTTAACCCCAAAGCAATTTGCTGTGGCTGTTGCATTTTGTGGGCTGATGGTAGGATGTGGGGATCAGTTTAATGGTTTTTCACT
AGGCATGTTAAATGGTGTTTTAGGAATGAAGCTCATTTGACCCACATAGAAGTGCAGTTTTGTGTTTTTCTTGGAGAATGGCAGGGATGCAAATTCCTCTTATGATCTAGTTGGACGATTGTTTTGGTCAAGGGGGCCAGGCAGTCGTGCGTTTTGCTTGGCAAATGACAAGGATGCAATTTCCTCTTTTTTTGACCCTA
ATTGAATGATTCATTTGCTCAAGGTGGCCATGTTGTGTAAAGATTTACAATTGTAAAAGGGTTTCATTGTATATGATATTTAGACAGAGCTTATGTTCATCTCGATTGTGTCCAGACTGATGCAGTTTATTTTACCTTTTAATTTTTATCAAATCATTGAAATATGGATTAGCTGTCAACTTTGACTTGAATATCGTTGC
CTAAATATATGTCGTGTATAGAACATACTGCGTTAACTACATTTCCAAGGCCGTTTGGAAATACACATTTGAGCTTTGGTGTGTTCCATAAGGCAATTTTGAATGAGTTTTGAATGGTCATTATATTTGTTATTGCACTGCTGCACATGAAGAGGAC
>TRINITY_DN100782_c9_g1_i8 from sample A4 / Example unspliced isoform:GTAAAAACCGGTCTCTGGAACCGTCATTAGAAACCAGAAACAACATTCCAAAACCACTTTGGCGAGGCTTATAACTCAACTTTGATATTATAGCTGTAATTCAAAAGGCCAACAAGAAAACCTTTAATCTGTGTCTGCGAGTTACCAGGCTTCGAGGGTTTGAGTGAAAGATTTCTGTTTATCCGCCGTTTCCGTTGTCC
ACTACATAATTCTTTGGTTTCCGGCAATGGCGACAACGGAAAATTCATCAAAGGTCACAAAAGAATGGAAGAAATTGAAGATCCAGGAGCTGCGCGATGAACTTTCTAAGAAGGATTCGAACCCTGGCGCTCCCAGCCCTTCGTCGACTGAATGCCTCGAAAATTCCTCCGATCCGCCGGAAAATGCCGTAGGCGAGGGC
CCTGAGTCGGACGTAAAGCAAGCCGCTCCTCCGTCAGAAGACGCACCAGAAAAATCCGAGGCAGTTAACGTGGAACCGCCTGCCGGAGACGAGGCATCTCAACTCAGTAGTGTCACCAAGAAGTGCGAAGATTCGATAACGGCAGAGTCGGTGGCCCCCGTCACGGCCGTCGAGGCAGCCGTGGAGAAGCCGTCAAATGA
GGGTGAAGACAACGGAGTTGCGAGCGTTGCAGGGCCTTTACAGTTGTCGGACTTGGAAAAGAAGCACCGGCGTGCCGAGAGGTTTGGCTTGGCGTTACAGTTGTCCGAGGAGGAGAAGCGCAATTCGCGAGCAACAAGATTTGGTGAGTCAGCAAATGGTACTCCAAAGCCTACCTCTCCTGGACTAGGAGAAGCAAAAG
CATTGGAAGAAGAAAAGAGGAAAGCCAGGGCCGAGAGGTTTGGGCTTGCTTTGCGTTCATCTGCTGATGATGAAGCAAAGAAGAAAGCTCGTTTAGCTAGATTTGGAGTGGATGTGAAATCTGCTTCCTTGGAAGATGAGAAGAAAAAAACAAGGGCTGCAAGgtaaaatctatttcaatgattgtccttggaagtatta
ttttgtttgctttgtatgttatggtgaagatcacatctgtttcttgtcttttcgctttttgtatttttaattttaattggaaattgaatgtagagggcattccttgtgcaatgttgatgagggcattccttgtgcattgctgaaaaatgatagcaaattgtatgtttatttcagGTTTGCTCCGACACTGGATGG
Intron 2 GTGAGCATAC ... TATGTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 9.12 | 340 | 65.6 | 34.8 |
| A2 | 7.18 | 370 | 92.4 | 29.2 |
| A3 | 10.3 | 401 | 64.8 | 47.4 |
| A4 | 9.43 | 359 | 59.2 | 38.4 |
| A5 | 7.87 | 202 | 34 | 17.6 |
| A6 | 8.46 | 1489 | 276.6 | 140.8 |
| A7 | 7.46 | 1430 | 271.8 | 117.6 |
| A8 | 7.36 | 1059 | 183.2 | 85.8 |
| A9 | 7.8 | 1109 | 219.4 | 95.8 |
| A10 | 8.27 | 969 | 176.8 | 89.4 |
>TRINITY_DN103791_c0_g1_i1 from sample A5 / Example spliced isoformGTAAAAACCGGTCTCTGGAACCGTCATTAGAAACCAGAAACAACATTCCAAAACCACTTTGGCGAGGCTTATAACTCAACTTTGATATTATAGCTGTAATTCAAAAGGCCAACAAGAAAACCTTTAATCTGTGTCTGCGAGTTACCAGGCTTCGAGGGTTTGAGTGAAAGATTTCTGTTTATCCGCCGTTTCCGTTGTCC
ACTACATAATTCTTTGGTTTCCGGCAATGGCGACAACGGAAAATTCATCAAAGGTCACAAAAGAATGGAAGAAATTGAAGATCCAGGAGCTGCGCGATGAACTTTCTAAGAAGGATTCGAACCCTGGCGCTCCCAGCCCTTCGTCGACTGAATGCCTCGAAAATTCCTCCGATCCGCCGGAAAATGCCGTAGGCGAGGGC
CCTGAGTCGGACGTAAAGCAAGCCGCTCCTCCGTCAGAAGACGCACCAGAAAAATCCGAGGCAGTTAACGTGGAACCGCCTGCCGGAGACGAGGCATCCCAACTCAGTAGTGTCACCAAGAAGTGCGAAGATTCGATAACGGCAGAGTCGGTGGCCCCCGTCACGGCCGTCGAGGCAGCCGTGGAGAAGCCGTCAAATGA
GGGTGAAGACAACGGAGTTGCGAGCGTTGCAGGGCCTTTACAGTTGTCGGACTTGGAAAAGAAGCACCGGCGTGCCGAGAGGTTTGGCTTGGCGTTACAGTTGTCCGAGGAGGAGAAGCGCAATTCGCGAGCAACAAGATTTGGTGAGTCAGCAAATGGTACTCCAAAGCCTACCTCTCCTGGACTGGGAGAAGCAAAAG
CATTGGAAGAAGAAAAGAGGAAAGCCAGGGCCGAGAGGTTTGGGCTTGCTTTGCGTTCATCTGCTGATGATGAAGCAAAGAAGAAAGCTCGTTTAGCTAGATTTGGAGTGGATGTGAAATCTGCTTCCTTGGAAGATGAGAAGAAAAAAACAAGGGCTGCAAGGTTTGCTCCGACACTGGATGGAAGTACTTCAGAAGTA
AACAAAAAACTAAAACTAGACCTGGCAGGGACTGTGTCATCAACATAAATGGTTTTGGGATAGTCTGAGGCAAATACACACTTCCTGTTGCAGCACACAGCGGAGTCAAGTGGGGCAGCATTAGATACTGGATATGATAAAAAAATAGGCTAGTGGGGCTAGAATTTGTATTAAATTTTGGATGCATTCAGTTGAAGGTT
ATGCATTAGTTTTCTTTTTATATTTGCTAGATTTCTTGTTTTTGTTGTTTTTTACCACATTTTGATTTGTTGCGACCCTACTCATTTGCTCCTTTTAGCTTTCTCTTGATCCCCTTCTCGTTTAGCTTACTCTTTTCTGTCCCCTCTTAATTTAGTATTTTGTAAGGGCCACATTTATGTAGAAGCTTAATTGTGTTTTG
AATCATTTTTATTATTGTCGTGGCTGCCTAGGCTTGTAACCATCTTTGTTTCAACTTTAAACTTTCTCTCATCTGCAAGGTCAAATTGTCTCTGGTTTTGATTTGATTTGCTCATTTATCTACCCTCTTAACTTTATTGAAATGTCCTAGTCAGATTGGGAATATCAATTTTCAAGCAGAAGTAAAATGGTAAAGAGAAT
TTGTACCAGAGCATGTGAACTTCAAAATTGATATTTTGCTGGTCACTTAATTACTGTGGTGCTTTTAATTTCTGCCAATTTTCGCTTTTAAAATCTGCTGAAATGTCATCATTGGCTATCACACTTCTGATCAGTTATACTCAGTTTCACTACGTCTTTATTTTTCATTTCCTTTATATCTGTTGTGTTACTCTACTTCT
CTCCTTTTGTCTATATTTGGGGATCCTTTTCTTTTACGTTATCTCACTTTTGATCAGTTATACTCAGTTTCATTCCATCTTTATTTTTCATTTCTGTGCCTTTTAGTCTTTTTGGACATTTTAACCCCAAAGCAATTTGCTGTGGCTGTTGCATTTTGTGGGCTGATGGTAGGATGTGGGGATCAGTTTAATGGTTTTTC
ACTAGGCATGTTAAATGGTGTTTTAGGAATGAAGCTCATTTGACCCACATAGAAGTGCAGTTTTGTGTTTTTCTTGGAGAATGGCAGGGATGCAAATTCCTCTTATGATCTAGTTGGACGATTGTTTTGGTCAAGGGGGCCAGGCAGTCGTGCGTTTTGCTTGGCAAATGACAAGGATGCAATTTCCTCTTTTTTTGACC
CTAATTGAATGATTCATTTGCTCAAGGTGGCCATGTTGTGTAAAGATTTACAATTGTAAAAGGGTTTCATTGTATATGATATTTAGACAGAGCTTATGTTCATCTCGATTGTGTCCAGACTGATGCAGTTTATTTTACCTTTTAATTTTTATCAAATCATTGAAATATGGATTAGCTGTCAACTTTGACTTGAATATCGT
TGCCTAAATATATGTCGTGTATAGAACATACTGCGTTAACTACATTTCCAAGGCCGTTTGGAAATACACATTTGAGCTTTGGTGTGTTCCATAAGGCAATTTTGAATGAGTTTTGAATGGTCATTATATTTGTTATTGCACTGCTGCGCATGAAGAGGACCACAGTATAAACATTTGAGTTTAAGCTCGGATGTTTTTTG
AAACATTGAATTTGACGTTTGTGGGTGAAAACATAGGATATAGTTGACTGGGTGAAATTGTAAATGTCACTTTCCGTTGTCTTTTGGCAAAGAAAAGTGCAGAATTTACAGGGTTTTCATTAGAAGAG
>TRINITY_DN103791_c0_g1_i2 from sample A5 / Example unspliced isoform:GTAAAAACCGGTCTCTGGAACCGTCATTAGAAACCAGAAACAACATTCCAAAACCACTTTGGCGAGGCTTATAACTCAACTTTGATATTATAGCTGTAATTCAAAAGGCCAACAAGAAAACCTTTAATCTGTGTCTGCGAGTTACCAGGCTTCGAGGGTTTGAGTGAAAGATTTCTGTTTATCCGCCGTTTCCGTTGTCC
ACTACATAATTCTTTGGTTTCCGGCAATGGCGACAACGGAAAATTCATCAAAGGTCACAAAAGAATGGAAGAAATTGAAGATCCAGGAGCTGCGCGATGAACTTTCTAAGAAGGATTCGAACCCTGGCGCTCCCAGCCCTTCGTCGACTGAATGCCTCGAAAATTCCTCCGATCCGCCGGAAAATGCCGTAGGCGAGGGC
CCTGAGTCGGACGTAAAGCAAGCCGCTCCTCCGTCAGAAGACGCACCAGAAAAATCCGAGGCAGTTAACGTGGAACCGCCTGCCGGAGACGAGGCATCCCAACTCAGTAGTGTCACCAAGAAGTGCGAAGATTCGATAACGGCAGAGTCGGTGGCCCCCGTCACGGCCGTCGAGGCAGCCGTGGAGAAGCCGTCAAATGA
GGGTGAAGACAACGGAGTTGCGAGCGTTGCAGGGCCTTTACAGTTGTCGGACTTGGAAAAGAAGCACCGGCGTGCCGAGAGGTTTGGCTTGGCGTTACAGTTGTCCGAGGAGGAGAAGCGCAATTCGCGAGCAACAAGATTTGGTGAGTCAGCAAATGGTACTCCAAAGCCTACCTCTCCTGGACTGGGAGAAGCAAAAG
CATTGGAAGAAGAAAAGAGGAAAGCCAGGGCCGAGAGGTTTGGGCTTGCTTTGCGTTCATCTGCTGATGATGAAGCAAAGAAGAAAGCTCGTTTAGCTAGATTTGGAGTGGATGTGAAATCTGCTTCCTTGGAAGATGAGAAGAAAAAAACAAGGGCTGCAAGGTTTGCTCCGACACTGGATGGAAGTACTTCAGAAGTA
AACAAAAAACTAAAACTAGACCTGGCAGGGACTGTGTCATCAACATAAATGgtgagcatacgatccttaatctcagagatactataatttaatttaatttttcgttgcatgatatcaagaaacacaactggttactttatctatgtttcagGTTTTGGGATAGTCTGAGGCAA