sp|Q9C8M0|CID8_ARATH ----> Polyadenylate-binding protein-interacting protein 8
Intron 1 GTGGGTGATT ... CTGAATTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.08 | 9 | 19 | 11.8 |
| A2 | 48.57 | 9 | 7 | 10 |
| A3 | 28.57 | 10 | 5 | 3 |
| A4 | 37.51 | 19 | 14 | 8.8 |
| A5 | 38.78 | 6 | 5 | 2.6 |
| A6 | 21.5 | 40 | 9.6 | 12.5 |
| A7 | 20.19 | 51 | 21 | 4.9 |
| A8 | 40.5 | 31 | 23 | 19.3 |
| A9 | 13.46 | 27 | 4 | 4.5 |
| A10 | 15.09 | 40 | 10 | 4.2 |
>TRINITY_DN117665_c1_g1_i2 from sample A1 / Example spliced isoformGCAAAACTGGTGATGTCAACGTCACATGATATGATGATGGGTGACGATGGAATTATTTTATTTATTTTCAAGGTCCGCTCTGGCCATGGTGACTCTTAAGCCGAAGCTTTTGGGAAGTTTAGAGCCAGGGAAGCAGAAGAAGCAATAATAAAATTCTGCTACATTCAAACCCTTGGTCCTTTCCAAATTGCAAAGAGACC
CAGAAACGCCCTGTTGCCTCCCCTTCCCAATAAGGGACATTCCCCACTGTGGAATGACCCAATCGCCCTTCATATAGGGGCTTCTGTGCATCTTGCCCTTTAATTTCAGGGCACCCACGCATATCTTCAAAGGCTGCAGAACATAGGGTTTCGAGGGATCTAAGGCACCGCGATGGCCTTGGTGGAGAACAATGTGACTG
TTGAAGGGGCGAGCTACGGGAAGCGAACCCCTGATCTCCCACTGGCTGAAAATCAGGGCGGATTCAATGGCGACATGCGGGAGCTTGTAGATTTACTCTCTAAGCTGAATCCTTTAGCTGAAGAGTTCGTCCCTCAGCCTCTCAGGTCGCCTTCTTTTATTATTAATGGCAATGGCAACTTCGCTAATAACGGGAGGAAG
AAGAAAAGCAATTTCAATCAGGGTAAAAGGAGGCCCAACGGTAGGAACATCAGAGCTCAACAGGAGGATAGCGTGAGAAGAACGGTTTATGTTTCCGATATTGATCAGCAGGTGACAGAAGAGCAGCTTGCAGCACTGTTTATCAGTTGCGGACAGGTTATCGACTGTCGCATATGTGGTGATCCTAATTCAGTTCTTCG
TTTTGCATTTATAGAATTTGCTGATGAGCATGGTGCAAGAGCAGCTTTGAGCCTCGCTGGGACCATGTTGGGATATTATCCAGTCAGGGTCCTCCCTTCCAAAACCGCAATTCTTCCAGTAAATCCAACATTTCTTCCAAGGTCTGAGGATGAGCGTGAGATGTGTGCGCGGACAATATATTGTACAAATATTGACAAAA
AGGTTTCTCAATTGGAAGTGAGAATGTTCTTTGAGTCACTTTGTGGTGAGGTTTCTCGCCTGAGACTGCTTGGAGATCATGTTCATTCCACTCGTATAGCATTTGTGGAATTTGTAATGGCTGAAAGTGCCATACTTGCATTGAACTGTAGTGGTGCAGTTGTGGGATCTTTGCCTATTAGAGTAAGTCCATCGAAGACA
CCAGTGCGGCCCCGCATCCCCCATCCTACCATGCAGTGAAGAATTACTGGAAGCTACACTGCAATGCTTTTGAACTATATGCATTGTTCTTTGAGAGGTTGAGCAAAGGATATTTTCGCTAGATGTAATGGTGTTTTGGAGTAGCTGTTTTTTGATAGATATCTAACATACATAGAGTAAACCTAGTTTTAGCTTGAAAA
ATTGAGGTCTGTTAAGACCTAAGTGCCAGATATCAGTTAGATTCAAGCAAGGGTTTCTTCTGATTAAGTACCCAGACTCAATGAGCATCTTATTTATCGTTTATGGAGCTTAATTAGATATTAATATTATCTACTGCTCATGAGCATGCAGATGCTTTTCAAGATGAAACCTTGAGGTGTTTTGTTCGTTTATTCAGACA
GGAATGTGCCAATAGAAATGTCATTTTATTGTGTGAAAGGCCAGGATAAACAGCCTTTTGTGCTTACAGGTTTGGGCACGAAATTGATCACCTCAACCGATATTTAAATCAATGTAGTAGTTTCCACAATTTGTTTAGCAAGACAGCTTCTAAAATAAGTGATTTCTCTGGAAGAAGCACCCAGCTGTTACGTTCATCCA
ATAATTATTGAAAAATTACCTTATATGATGCTCATCTTCATGGCTTGCTTCATTCTTTGGTTTAATTGTTGGGACAAAGCAGATAAATGCTGTGC
>TRINITY_DN117665_c1_g1_i3 from sample A1 / Example unspliced isoform:GACAGAAGAGCAGCTTGCAGCACTGTTTATCAGTTGCGGACAGGTTATCGACTGTCGCATATGTGGTGATCCTAATTCAGTTCTTCGTTTTGCATTTATAGAATTTGCTGATGAGCATGGTGCAAGAGCAGCTTTGAGCCTCGCTGGGACCATGTTGGGATATTATCCAGTCAGGGTCCTCCCTTCCAAAACCGCAATTC
TTCCAGTAAATCCAACATTTCTTCCAAGGTCTGAGGATGAGCGTGAGATGTGTGCGCGGACAATATATTGTACAAATATTGACAAAAAGGTTTCTCAATTGGAAGTGAGAATGTTCTTTGAGTCACTTTGTGGTGAGgtgggtgatttgaaccacatctgtggtcatttatgcgagggcacatttggaaaagctttgtgc
tgagctgacggagtttttctgcatactgaattcagGTTTCTCGCCTGAGACTGCTTGGAGATCATGTTCATTCCACTCGTATAGCATTTGTGGAATTTGTAATGGCTGAAAGTGCCATACTTGCATTGAACTGTAGTGGTGCAGTTGTGGGATCTTTGCCTATTAGAGTAAGTCCATCGAAGACACCAGTGCGGCCCCGC
ATCCCCCATCCTACCATGCAGTGAAGAATTACTGGAAGCTACACTGCAATGCTTTTGAACTATATGCATTGTTCTTTGAGAGGTTGAGCAAAGGATATTTTCGCTAGATGTAATGGTGTTTTGGAGTAGCTGTTTTTTGATAGATATCTAACATACATAGAGTAAACCTAGTTTTAGCTTGAAAAATTGAGGTCTGTTAA
GACCTAAGTGCCAGATATCAGTTAGATTCAAGCAAGGGTTTCTTCTGATTAAGTACCCAGACTCAATGAGCATCTTATTTATCGTTTATGGAGCTTAATTAGATATTAATATTATCTACTGCTCATGAGCATGCAGATGCTTTTCAAGATGAAACCTTGAGGTGTTTTGTTCGTTTATTCAGACAGGAATGTGCCAATAG
AAATGTCATTTTATTGTGTGAAAGGCCAGGATAAACAGCCTTTTGTGCTTACAGGTTTGGGCACGAAATTGATCACCTCAACCGATATTTAAATCAATGTAGTAGTTTCCACAATTTGTTTAGCAAGACAGCTTCTAAAATAAGTGATTTCTCTGGAAGAAGCACCCAGCTGTTACGTTCATCCAATAATTATTGAAAAA
TTACCTTATATGATGCTCATCTTCATGGCTTGCTTCATTCTTTGGTTTAATTGTTGGGACAAAGCAGATAAATGCTGTGC
Intron 2 GTAAGTGACT ... GCCAAATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40.54 | 22 | 15 | 4 |
| A2 | 51.72 | 14 | 15 | 3 |
| A3 | 28.95 | 27 | 11 | 2 |
| A4 | 19.35 | 25 | 6 | 7 |
| A5 | 72.73 | 3 | 8 | 11 |
| A6 | 19.05 | 51 | 12 | 0 |
| A7 | 17.86 | 69 | 15 | 0 |
| A8 | 13.21 | 46 | 7 | 0 |
| A9 | 22.54 | 55 | 16 | 0 |
| A10 | 18.46 | 53 | 12 | 0 |
>TRINITY_DN101040_c0_g1_i3 from sample A4 / Example spliced isoformGAAAGTGCAAAACTGGTGATGTCAACGTCACATGATATGATGATGGGTGACGATGGAATTATTTTATTTATTTTCAAGGTCCGCTCTGGCCATGGTGACTCTTAAGCCGAAGCTTTTGGGAAGTTTAGAGCCAGGGAAGCAGAAGAAGCAATAATAAAATTCTGCTACATTCAAACCCTTGGTCCTTTCCAAATTGCAAA
GAGACCCAGAAACGCCCTGTTGCCTCCCCTTCCCAATAAGGGACATTCCCCACTGTGGAATGACCCAATCGCCCTTCATATAGGGGCTTCTGTGCATCTTGCCCTTTAATTTCAGGGCACCCACGGATATCTTCAAAGGCTGCAGAACATAGGGTTTCGAGGGATCTAAGGCACCGCGATGGCCTTGGTGGAGAACAATG
TGACTGTTGAAGGGGCGAGCTACGGGAAGCGAACCCCTGATCTCCCACTGGCTGAAAATCAGGGCGGATTCAATGGCGACATGCGGGAGCTTGTAGATTTACTCTCTAAGCTGAATCCTTTAGCTGAAGAGTTCGTCCCTCAGCCTCTCAGGTCGCCTTCTTTTATTATTAATGGCAATGGCAACTTCGCTAATAACGGG
AGGAAGAAGAAAAGCAATTTCAATCAGGGTAAAAGGAGGCCCAACGGTAGGAACATCAGAGCTCAACAGGAGGATAGCGTGAGAAGAACGGTTTATGTTTCCGATATTGATCAGCAGGTGACAGAAGAGCAGCTTGCAGCACTGTTTATCAGTTGCGGACAGGTTATCGACTGTCGCATATGTGGTGATCCTAATTCAGT
TCTTCGTTTTGCATTTATAGAATTTGCTGATGAGCATGGTGCAAGAGCAGCTTTGAGCCTCGCTGGGACCATGTTGGGATATTATCCAGTCAGGGTCCTCCCTTCCAAAACCGCAATTCTTCCAGTAAATCCAACATTTCTTCCAAGGTCTGAGGATGAGCGTGAGATGTGTGCGCGGACAATATATTGTACAAATATTG
ACAAAAAGGTTTCTCAATTGGAAGTGAGAATGTTCTTTGAGTCACTTTGTGGTGAGGTTTCTCGCCTGAGACTGCTTGGAGATCATGTTCATTCCACTCGTATAGCATTTGTGGAATTTGTAATGGCTGAAAGTGCCATACTTGCATTGAACTGTAGTGGTGCAGTTGTGGGATCTTTGCCTATTAGAGTAAGTCCATCG
AAGACACCAGTGCGGCCCCGCATCCCCCATCCTACCATGCAGTGAAGAATTACTGGAAGCTACACTGCAATGCTTTTGAACTATATGCATTGTTCTTTGAGAGGTTGAGCAAAGGAT
>TRINITY_DN101040_c0_g1_i5 from sample A4 / Example unspliced isoform:GAAAGTGCAAAACTGGTGATGTCAACGTCACATGATATGATGATGGGTGACGATGGAATTATTTTATTTATTTTCAAGGTCCGCTCTGGCCATGGTGACTCTTAAGCCGAAGCTTTTGGGAAGTTTAGAGCCAGGGAAGCAGAAGAAGCAATAATAAAATTCTGCTACATTCAAACCCTTGGTCCTTTCCAAATTGCAAA
GAGACCCAGAAACGCCCTGTTGCCTCCCCTTCCCAATAAGGGACATTCCCCACTGTGGAATGACCCAATCGCCCTTCATATAGGGGCTTCTGTGCATCTTGCCCTTTAATTTCAGGGCACCCACGGATATCTTCAAAGGCTGCAGAACATAGGGTTTCGAGGGATCTAAGGCACCGCGATGGCCTTGGTGGAGAACAATG
TGACTGTTGAAGGGGCGAGCTACGGGAAGCGAACCCCTGATCTCCCACTGGCTGAAAATCAGGGCGGATTCAATGGCGACATGCGGGAGCTTGTAGATTTACTCTCTAAGCTGAATCCTTTAGCTGAAGAGTTCGTCCCTCAGCCTCTCAGGTCGCCTTCTTTTATTATTAATGGCAATGGCAACTTCGCTAATAACGGG
AGGAAGAAGAAAAGCAATTTCAATCAGGGTAAAAGGAGGCCCAACGGTAGGAACATCAGAGCTCAACAGGAGGATAGCGTGAGAAGAACGGTTTATGTTTCCGATATTGATCAGCAGgtaagtgacttcttgccagaaattaaggaaacagtaattttcaatagcattgcttctgttgtatcaagacaacttacagtaac
agtacaattatcgtatggacgttctcttaatgggaatttcaaaactggtatgattatcatgtcaggatgagtttgagtagtcaaatgccaagcactaaatatcctctgggatgtttggttatccatctttctccccatgtatatgctggcccttctaggtgctaaagggcaatgtttaacttatcttcttggttatatat
gccacttggaaggccaattttatttttctcagccacatatacacctcaatgtcacctccggaatcatactgcagggtcttcgtttgaaatttataagagaatttgggatttcaatggcaacatagctgttatgttgaattgaatataattcatggtgcagcaggagattaatgcctggtttttaaagttatctgaacaca
agaatgtatagaaaaaaacactcaaactgtgtaggactaatggtgccagtggttacctttcattgccttagaattagacttgttgtcaatgtttactgggatttatataggtgactgacatatgctggattgtaaaatcataaataattttgattaagttttgttcaattagcgatcaaaaggtcacactgacgactctt
ttgggtattctttatctgccaaatcagGTGACAGAAGAGCAGCTTGCAGCACTGTTTATCAGTTGCGGACAGGTAATTCCCCATTTATATGCTTTGTTTAACTTTTATTACTATTTCTTTCCTTACTTTCTACTTCAAGCATCAGACTGAAATTTTTCTAGGTAGTTAAAATTTAATGGGTTCTTTTTCTTGAGAATTCT
ATGCTCTTAGGTGGTACGGATTGTATCGTATTTTGTAATATATTGTGTTGCGGAATGAGAGTAAATTTGTCTGGCTTTTTAGTTAAGAAGATTGGATATCAATATTTATTATTTAGTCTTGTTTGGAGGGCCTTATTTAGTTTTCAATCTGCATTTATGCTTACATTAATGGCTTTCTATCAAACAAGAAGAAGCATAGA
TGTATCAAGCACATCACCAAGATGTGCTCAGCATTGATGAAGTGTGCAAAGATTCAAGCTCTG