NA ----> NA
Intron 1 GTATGATTTT ... TTTAAATTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.88 | 17 | 15 | 7 |
| A2 | 55.56 | 4 | 5 | 7 |
| A3 | 65.63 | 11 | 21 | 5 |
| A4 | 66.67 | 4 | 8 | 7 |
| A5 | 57.14 | 3 | 4 | 3 |
| A6 | 57.89 | 88 | 121 | 31 |
| A7 | 58.17 | 64 | 89 | 25 |
| A8 | 61 | 78 | 122 | 22 |
| A9 | 58.13 | 85 | 118 | 19 |
| A10 | 68.75 | 30 | 66 | 31 |
>TRINITY_DN110725_c0_g1_i3 from sample A1 / Example spliced isoformTTTGCCCGAAAGGAGTAAATGCTAATCGAACTACACTGATATATATAATCCCCTTTTGCTTTCTGTAATGTAGTTTAATTGTCAAAATCCTTGCCATCTCTGATACCAATACAGACGCAGATCAACTGTTCGAATCTCATGGCTTGCAGCAACATGGTACGGGCCTACAGAGCCTCCGTTGTGCACAGCGTGGGCGACCC
CTCACAGGTGGGCATCGAGGCCTCCTACGAGTACTACGAAGATGGCCTCCTCGTGGTCTCCGACGGGAAAATACAAGCCCTAGGCCACGCCCACGATTTGCTTCCCAGCCTGAGTCACGGCACCAAGGTCGTACACTACCAGGACTCCCTCATCGTTCCGGGCTTCCTCGACACCCACATCCACTACCCGCAGTTCGAAG
TCGTGGCTTCCTATGGCGACCAGCTGCTGGACTGGCTCAACAACTACGTCTTCCCCGCCGAGGCCCGCTTCGTCGACCGCGCCCACGCCTCTACCGTGGCCAGTCGCTTCCTCGACGAGCTTCTGCGCAACGGCACGACAACGGCGCTCGTTTTTGCGACCTCGCACATGGACAGCGTGGATGCCTTCTTCGAGGCGTCG
TCGGAGCGAGGGCTTAGGATGATAGCTGGCAAGGTCCTCATGGATCGCAACGCCCCCGATTCTGTCACCGATACAGCGGAGTCCGGCTACAGGGATAGCGCGGAGCTCATCCGTCGCTGGCACGGCAAAGGCCGCCTGAGCTACGCGGTCACGCCACGGTTTGCAATCACCTCCACCCCGGAGCAGCTACTGCGCGCCGG
AGAGTTGCTCGCGGAGCACCCTGGGGTGTACCTGCACACGCACCTGTCGGAGAATAAAAAGGAAATTGAAGTCGTGGCGAAGCTCTTTCCCGAGCGCCGTGGCTATCTCGACGTCTACGACCACTACAAGCTGGTGGGCCCGCGATCGGTGTTCGCCCACGGTGTGCACCTGACGGACGAGGAGTGCGCCCGCCTAGGGC
AGAGCGGCGCTGCCGTGGCTTTCTGCCCGACGTCTAATCTTTTCTTGGGCAGCGGGCTCCTGGACCTGCCCAGGCTGGAGGCGCATGGGGTAAGCGTGGGGCTGGGCACAGATGTGGGCGCCGGCACCAGCTTTTCGTTGCTCCAGACGCTCAACGAGGCCTATAAGGTTATGCAGCTCCAGGGCTACAAGCTGCACCCT
TTCAAGTCGCTCTATTTGGCCACGCTCGGCGGTGCGCGGGCTTTGAAGCTCGACGATCGTATCGGGAGCTTCGCCACGGGCAACGAGGCGGATTTCGTGGTGCTCGACTACAAGGCCACGCCGTTGATCGGGCACCGGATTGAGGGGGCGCGCAGCCTTGAAGAGAAATTGTTCGTGCTCATGATGTTGGGAGACGACCG
TTGCGTGAAAGAGACATTTGCTGCCGGGAAGTCTGTTCATAAGCGGTCTAATTGCTGATCATTTTCTCCTATCAGGATTTTGCCTCTGCCAAGTGCTTGGGTCATGATTGAGCTTAGTTGATGAGGTCCCTGTCGCATGAGAGGCCACTCACCAAAGTTCAGTTGCGTGGGTAAACTATAAGTTTGTCTGATAAGCCGTG
GGAAGCCGTGATCAGCATTGTGGAATAGTTTCTATGACCATGACTTTGGGGAATTGGCAACTGGGGGGCGAGTATGAGGCTAGGGTGAGTATGGGCGAGTTTCGTACTCGTGTGATATAGGGTCGATTCTGGTTCAATACCACTATATCTCTAGGTACACCTACACAGCACAGCCTGCAAGTATGGGCAAGCATGGGCAA
GCATAGGCATGGGCTAATTGGAGTTTGAACCTGTCACCTCTTTCCAATATGTCATATCATTTCACCACTTCGTCATCACTTCTTTCCAATATGTCATATCATTTCACCACTTCGTCGTCAGTCGGTCTACACCTC
>TRINITY_DN110725_c0_g1_i4 from sample A1 / Example unspliced isoform:TTTGCCCGAAAGGAGTAAATGCTAATCGAACTACACTGATATATATAATCCCCTTTTGCTTTCTGTAATGTAGTTTAATTGTCAAAATCCTTGCCATCTCTGATACCAATACAGACGCAGATCAACTGTTCGAATCTCATGGCTTGCAGCAACATGGTACGGGCCTACAGAGCCTCCGTTGTGCACAGCGTGGGCGACCC
CTCACAGGTGGGCATCGAGGCCTCCTACGAGTACTACGAAGATGGCCTCCTCGTGGTCTCCGACGGGAAAATACAAGCCCTAGGCCACGCCCACGATTTGCTTCCCAGCCTGAGTCACGGCACCAAGGTCGTACACTACCAGGACTCCCTCATCGTTCCGGGCTTCCTCGACACCCACATCCACTACCCGCAGTTCGAAG
TCGTGGCTTCCTATGGCGACCAGCTGCTGGACTGGCTCAACAACTACGTCTTCCCCGCCGAGGCCCGCTTCGTCGACCGCGCCCACGCCTCTACCGTGGCCAGTCGCTTCCTCGACGAGCTTCTGCGCAACGGCACGACAACGGCGCTCGTTTTTGCGACCTCGCACATGGACAGCGTGGATGCCTTCTTCGAGGCGTCG
TCGGAGCGAGGGCTTAGGATGATAGCTGGCAAGGTCCTCATGGATCGCAACGCCCCCGATTCTGTCACCGATACAGCGGAGTCCGGCTACAGGGATAGCGCGGAGCTCATCCGTCGCTGGCACGGCAAAGGCCGCCTGAGCTACGCGGTCACGCCACGGTTTGCAATCACCTCCACCCCGGAGCAGCTACTGCGCGCCGG
AGAGTTGCTCGCGGAGCACCCTGGGGTGTACCTGCACACGCACCTGTCGGAGAATAAAAAGGAAATTGAAGTCGTGGCGAAGCTCTTTCCCGAGCGCCGTGGCTATCTCGACGTCTACGACCACTACAAGCTGGTGGGCCCGCGATCGGTGTTCGCCCACGGTGTGCACCTGACGGACGAGGAGTGCGCCCGCCTAGGGC
AGAGCGGCGCTGCCGTGGCTTTCTGCCCGACGTCTAATCTTTTCTTGGGCAGCGGGCTCCTGGACCTGCCCAGGCTGGAGGCGCATGGGGTAAGCGTGGGGCTGGGCACAGATGTGGGCGCCGGCACCAGCTTTTCGTTGCTCCAGACGCTCAACGAGGCCTATAAGGTTATGCAGCTCCAGGGCTACAAGCTGCACCCT
TTCAAGTCGCTCTATTTGGCCACGCTCGGCGGTGCGCGGGCTTTGAAGCTCGACGATCGTATCGGGAGCTTCGCCACGGGCAACGAGGCGGATTTCGTGGTGCTCGACTACAAGGCCACGCCGTTGATCGGGCACCGGATTGAGGGGGCGCGCAGCCTTGAAGAGAAATTGTTCGTGCTCATGATGTTGGGAGACGACCG
TTGCGTGAAAGAGACATTTGCTGCCGGGAAGTCTGTTCATAAGCGGTCTAATTGCTGATCATTTTCTCCTATCAGGATTTTGCCTCTGCCAAGTGCTTGGGTCATGgtatgatttttcaaaactatttaccaataaagaggtcatattaaatatttaattttattcaatttgtaatattctctattttaaattagATTGA
GCTTAGTTGATGAGGTCCCTGTCGCATGAGAGGCCACTCACCAAAGTTCAGTTGCGTGGGTAAACTATAAGTTTGTCTGATAAGCCGTGGGAAGCCGTGATCAGCATTGTGGAATAGTTTCTATGACCATGACTTTGGGGAATTGGCAACTGGGGGGCGAGTATGAGGCTAGGGTGAGTATGGGCGAGTTTCGTACTCGT
GTGATATAGGGTCGATTCTGGTTCAATACCACTATATCTCTAGGTACACCTACACAGCACAGCCTGCAAGTATGGGCAAGCATGGGCAAGCATAGGCATGGGCTAATTGGAGTTTGAACCTGTCACCTCTTTCCAATATGTCATATCATTTCACCACTTCGTCATCACTTCTTTCCAATATGTCATATCATTTCACCACT
TCGTCGTCAGTCGGTCTACACCTC