sp|Q9SR22|PAE5_ARATH ----> Pectin acetylesterase 5
Intron 1 GTGTGGAGAT ... ATTTTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.46 | 181.3 | 52.5 | 25 |
| A2 | 17.54 | 149.3 | 38.8 | 17.5 |
| A3 | 19.13 | 190.8 | 54 | 35 |
| A4 | 16.99 | 163.3 | 41.5 | 14 |
| A5 | 20.28 | 91.8 | 30 | 15.5 |
| A6 | 14.43 | 113.8 | 23.5 | 3.8 |
| A7 | 13.28 | 205.3 | 41 | 2 |
| A8 | 12.22 | 368.3 | 66 | 4.5 |
| A9 | 12.17 | 201.8 | 37.5 | 1.3 |
| A10 | 13.41 | 178.5 | 37.5 | 1 |
>TRINITY_DN125803_c2_g1_i5 from sample A1 / Example spliced isoformTGGAGATGTTGGGTAGCAAACTCTATTTGAGAGGACAAAAGATATGGCAAGTTGTAATGGAATATCTTTTGGAACAGGGGATGAACAAAGCCGAACAGGCTATTCTTACTGGTTGCTCAGCAGGTGGTCTGGCCACATTTATTCAGTGCGATTATTTTCGTCATCTTCTGCCCAAGAGTGCTAATGATCTTCTACCCACA
GTCACAGTGGACTCCACATTACAGTTAAAGTGCAAGCTCCAACTTTGATTCTCCTTATGGACCAGAGTTTCTCTTCAGCCAAATTTAGAGGACAAAAAGAATATACATGCATGGCCATGACATATGAAGTATCTACATGTTCGTGACAAAAGACAATAAA
>TRINITY_DN125803_c2_g1_i17 from sample A1 / Example unspliced isoform:TGGAGATGTTGGGTAGCAAACTCTATTTGAGAGGACAAAAGATATGGCAAGTTGTAATGGAATATCTTTTGGAACAGGGGATGAACAAAGCCGAACAGGCTATTCTTACTGGTTGCTCAGCAGGTGGTCTGGCCACATTTATTCAGTGCGATTATTTTCGTCATCTTCTGCCCAAGAGTGCTAATGATCTTCTACCCACA
GTCACAGTGGACTCCACATTACAGTTAAAGTGCAAGCTCCAACTTTGATTCTCCTTATGGACCAGAGTTTCTCTTCAGCCAAATTTAGgtgtggagattattttaattgtcaaattatattagtcacttatttaaatcatgaatttaaattatgcaagttttgttacattaagcatggattgtcactgaattttgaagga
tattatttttgcagAGGACAAAAAGAATATACATGCATGGCCATGACATATGAAGTATCTACATGTTCGTGACAAAAGACAATAAA
Intron 2 GTAGGTTGAC ... TTTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 6.01 | 266 | 16 | 18 |
| A2 | 9.13 | 234 | 21 | 26 |
| A3 | 8.06 | 228 | 17 | 23 |
| A4 | 5.83 | 226 | 10 | 18 |
| A5 | 6.11 | 169 | 10 | 12 |
| A6 | 1.05 | 94 | 1 | 1 |
| A7 | 0.36 | 280 | 0 | 2 |
| A8 | 0 | 304 | 0 | 0 |
| A9 | 1.05 | 188 | 2 | 2 |
| A10 | 1.83 | 161 | 3 | 3 |
>TRINITY_DN110011_c1_g1_i3 from sample A4 / Example spliced isoformGTCAGGTTCAATCACAAAATCCAGGGTAGCAAACTCCATTTGAGAGGACAAAAGATATGGCAAGCTGTAATGGAAGATCTTTTGGCACACAGGGGATGAACAAAGCCGAACCAGGGGATGAACAAAGCCAAACAAGCTATTCTTACTGGCTGCTCAGCATGTGTTCTAGCCACAGCCAAATCATCATCTTCTGCCCAAGA
GTGCTAATGATCTTCTGTCCACAGTCACAGTGGACTCCACATTACAG
>TRINITY_DN110011_c1_g1_i4 from sample A4 / Example unspliced isoform:CAAGCTGTAATGGAAGATCTTTTGGCACACAGGGGATGAACAAAGCCGAACCAGGGGATGAACAAAGCCAAACAAgtaggttgacctaattatctatgatgcatacatatttatcataaaagtattggaagctatgaaaatggaatgtgatctatcttctgatttgttgcagGCTATTCTTACTGGCTGCTCAGCATGTG
TTCTAGCCACAGCCAAATCATCATCTTCTGCCCAAGAGTGCTAA