sp|Q39491|PTP3_CHLMO ----> Dual specificity protein phosphatase
Intron 1 GTAATCTTTG ... CAAAGGAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 14.65 | 93.8 | 14 | 18.8 |
| A2 | 16.89 | 72.3 | 14.3 | 6.3 |
| A3 | 17.07 | 79 | 16 | 9.8 |
| A4 | 24.55 | 66 | 20 | 3.8 |
| A5 | 32.02 | 25.5 | 12 | 0.8 |
| A6 | 15.77 | 278.8 | 52 | 35.3 |
| A7 | 19.48 | 505 | 121.8 | 69.8 |
| A8 | 16.15 | 635 | 122.3 | 97.5 |
| A9 | 18.45 | 558 | 125.5 | 76 |
| A10 | 22.13 | 356.8 | 101 | 36 |
>TRINITY_DN45166_c0_g1_i1 from sample A7 / Example spliced isoformGGTCTTGAGACCTTCGAAATTTTAATTCCTTCGAAGTAAAATCCCAAATGAAAAAAAGTAGTTAGCGAGAGAAGCTCAAGTTGGTATTTTTCAGTTGTGATTGAAAATTTCTGCCGGTATTTAATCAGGGACGCATTTATGGTAATGTTATGGGGATTCCATAACTTAACATTCACACTGGGTTTCTATGTGCAGTGCAG
TGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCGTCAATGCATTGTAACTGCGTTCAAACACGCATCATTAAATTGAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTGTACGCTCGAATGCATTGGGTTGCTCACATTTTATCTGTTATGATCGAATTGGGTCTG
TGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAATTTGAGGTAAAGCAGTTTCCTCTGCAATTGGTTGCCCATATCTTGACATGTGGGTTGAGGTTAAAAAACAGGAGGGAATGAAGAAAGTGAGAGAGGGGTTATATATTGGCAATTTCTTTGACATGTGCATGGTTTTGGGAGATGAC
TCAAGACTCCAGGTGAAAATTACACATGTATTGTCTCTTCTTACCACAAATTTCTTACATACGTCTTTTGATGGGAAAAGGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGGGCGGTGTTTCAGGATCAGAGATCGAAACGGGGGATTGCTCCGTGGAAATTAC
AGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTTGGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGGAAGTCCATATTTCACCAGAAAGGTCCCGAGACTGAATTCCATA
TTGTCAGTTGGGTCTAGCTCGGGTGGTTGAGAGTTGGGATGTTATCGTCTCCACCTGGTTCAAATCCCGCTTGTAGCATGTTTGCTTAATGTCAGCCAATTGTTGATTGGGGCTCTTTGTGAGCCAATTGTTGCTTGGGGCTGGCAAGTGCAGCAGTGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAA
GATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAAGGGCTTCATGGAGCAGCTCCAAATGTTCGAGGAAATGGGTTATAAGATTGATCCTATGCATCCCGTGTACAAAAGTTTCAAAGCATCAAGGACATGCCTGGAGGGACATTAGATGCAAACTTAACTGCCACTCAAATTTCCGAAAGAACA
GACCATTTCAAGTAATCATGTGAATTTCAGATGATACTATCATGCTACTCCAGCGAAAGTTTTGTTGTAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGCAATTAAACAATAAGCATATCACAAATGGCTGATTTGAAGCGATGTGCTCATTTGATATGATACGTGACCCTTGAAAACTTGAATAT
TAAAATCTCTGAAATTCAAGCATTGATTAACTTGCATTCTATCCTTTGATGGGTTTGTGATCATTGAATTTTCTCTATCATGTTTTGTAGTATGCTGTCATCAAAATCATTTTTTTGTTGACTTGATATTTTATGATCTGTTAACTATTCTATGATTTTCTTGCATCAGGTTTGTATTATCCTCTCATCCTTTTAGAAAT
CTGAAC
>TRINITY_DN45166_c0_g1_i3 from sample A7 / Example unspliced isoform:GGTCTTGAGACCTTCGAAATTTTAATTCCTTCGAAGTAAAATCCCAAATGAAAAAAAGTAGTTAGCGAGAGAAGCTCAAGTTGGTATTTTTCAGTTGTGATTGAAAATTTCTGCCGGTATTTAATCAGGGACGCATTTATGGTAATGTTATGGGGATTCCATAACTTAACATTCACACTGGGTTTCTATGTGCAGTGCAG
TGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCGTCAATGCATTGTAACTGCGTTCAAACACGCATCATTAAATTGAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTGTACGCTCGAATGCATTGGGTTGCTCACATTTTATCTGTTATGATCGAATTGGGTCTG
TGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAATTTGAGGTAAAGCAGTTTCCTCTGCAATTGGTTGCCCATATCTTGACATGTGGGTTGAGGTTAAAAAACAGGAGGGAATGAAGAAAGTGAGAGAGGGGTTATATATTGGCAATTTCTTTGACATGTGCATGGTTTTGGGAGATGAC
TCAAGACTCCAGGTGAAAATTACACATGTATTGTCTCTTCTTACCACAAATTTCTTACATACGTCTTTTGATGGGAAAAGGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGGGCGGTGTTTCAGGATCAGAGATCGAAACGGGGGATTGCTCCGTGGAAATTAC
AGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTTGGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTGCAGCAGTGATAGTGGCATATTTGATGAAGACTGAGAGGCTAT
CTGTCAAAGATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAAGGGCTTCATGGAGCAGCTCCAAATGTTCGAGGAAATGGGTTATAAGATTGATCCTATGCATCCCGTGTACAAAAGTTTCAAAGCATCAAGGACgtaatctttgtgtggaacaagtccattggggaatctcttagttgactcc
atagcccaaaggaaagATGCCTGGAGGGACATTAGATGCAAACTTAACTGCCACTCAAATTTCCGAAAGAACAGACCATTTCAAGTAATCATGTGAATTTCAGATGATACTATCATGCTACTCCAGCGAAAGTTTTGTTGTAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGCAATTAAACAATAA
GCATATCACAAATGGCTGATTTGAAGCGATGTGCTCATTTGATATGATACGTGACCCTTGAAAACTTGAATATTAAAATCTCTGAAATTCAAGCATTGATTAACTTGCATTCTATCCTTTGATGGGTTTGTGATCATTGAATTTTCTCTATCATGTTTTGTAGTATGCTGTCATCAAAATCATTTTTTTGTTGACTTGAT
ATTTTATGATCTGTTAACTATTCTATGATTTTCTTGCATCAGGTTTGTATTATCCTCTCATCCTTTTAGAAATCTGAAC
Intron 2 GTCATTTTCT ... AATCTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.92 | 80.5 | 62.1 | 23 |
| A2 | 31.45 | 82.2 | 36.8 | 36.7 |
| A3 | 31.05 | 68.8 | 34.5 | 29.9 |
| A4 | 33.09 | 37.4 | 21.8 | 17.5 |
| A5 | 38.13 | 22.3 | 12.2 | 13.2 |
| A6 | 35.15 | 336.9 | 104.2 | 180.9 |
| A7 | 34.38 | 485.8 | 176.8 | 250.8 |
| A8 | 34.75 | 735.8 | 213.9 | 388.2 |
| A9 | 33.73 | 559.1 | 185.5 | 281.7 |
| A10 | 29.23 | 314.2 | 113.9 | 128 |
>TRINITY_DN119744_c5_g1_i9 from sample A1 / Example spliced isoformGTTGGTATTTTTCAGTTGTGATTGAAAATTTCTGCCGGTATTTAATCAGGGACGCATTTATGGTAATGTTATGGGGATTCCATAACTCATTCACACTGGGTTTCTATGTGCAGTGCAGTGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCACTGCATTGTAACTGCGTTCAAACACGCATCATTTAATT
GAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTCTACGCTCGAATGCATTGGGTTGCTCACATTTTATCTGTTATGTTCGAATTGGGTCTGTGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAATTTGAGGTAAAGCAGTTTCCTCTGCAATTGG
TTGCCCATATCTTGACATGTGGGTTGAGGTTAAAAAACAGGAGGGAATGAAGAAAGTGAGAGAGGGGTTATATATTGGCAATTTCTTTGACATGTGCATGGTTTTGGGAGATGACTCAAGACTCCAGGTGAAAATTACACATGTATTGTCTCTTCTTACCACAAATTTCTTACATACGTCTTTTGATGGGAAAAGGCAGT
TGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGGGCGGTGTTTCAGGATCAGAGATCGAAACGGGGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTTGGAGGCTTGC
CTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTGCAGCAGTGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAAGATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAAGGGCTTCATGGAGCAGCTCCAAATGTT
CGAGGAAATGGGTTATAAGATTGATCCTATGCATCCTGTGTACAAAAGTTTCAAAGCATCAAGGACATGCCTGGAGGGACATTAGATGCAAACTTAACTGCCACTCAAATTTCCGAAAGAACAGACCATTTCAAGTAATCATGTGAATTTCAGATGATACTATCATGCTACTCCAGCGAAAGTTTTGTTGTAACTTCGCA
TACATGATACTTATTTGAAATTAAGAAGCAAGTTTGCAATTAAACAATAAGCATATCACAAATGGCTAATTTGAAGCGATGTGCTCATTTGATATGATACGTGACCCTTGAAAACTTGAATATTAAAATCTCTGAAATTCAAGCATTGATTAACTTGCATTCTATCCTTTGATGGGTTTGTGATCATTGAATTTTCTCTA
TCATGTTTTGTAGTATGCTGTCATCAAAATCATTTTTTTGTTGACTTGATATTTTATGATCTGTTAACTAAAAA
>TRINITY_DN119744_c5_g1_i10 from sample A1 / Example unspliced isoform:AATTTTAATTCCTTCAAAGTAAAATCCCAAATGAAAAAAAGTAGTTAGCGAGAGAAGCTCAGTGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCGTCACTGCATTGTAACTGCGTTCAAACACGCATCATTTAATTGAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAA
AACTCTACGCTCGAATGCATTGGGTTGCTCACATTTTATCTGTTATGTTCGAATTGGGTCTGTGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAATTTGAGGTAAAGCAGTTTCCTCTGCAATTGGTTGCCCATATCTTGACATGTGGGTTGAGGTTAAAAAACAGGAGGGAATGAAGA
AAGTGAGAGAGGGGTTATATATTGGCAATTTCTTTGACATGTGCATGGTTTTGGGAGATGACTCAAGACTCCAGGTGAAAATTACACATGTATTGTCTCTTCTTACCACAAATTTCTTACATACGTCTTTTGATGGGAAAAGGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCC
AGGAGTGAGAGCAGTGTTTCAGGATCAGAGATCGAAACGGGGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTTGGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCAT
GGCTGGAGTTTCTAGAAGTGCAGCAGTGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAAGATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAAGGGCTTCATGGAGCAGCTCCAAATGTTCGAGGAAATGGGTTATAAGATTGATCCTATGCATCCTGTGTACAAAAGTTTCA
AAGCATCAAGAACATGCCTGGAGGGACATTAGATGCAAACTTAACTGCCACTCAAATTTCCGAAAGAACAGACCATTTCAAGTAATCATGTGAATTTCAGgtcattttcttgcatcttgagcctctgttttaccaatatctagtcgactatccttgggttcaatccttcatataattcttgattcccatctttttcaaga
ttattctcatgtagaacatactgttattgtgcttcatatgattgactagtatttcagtgatgtttttattacattcatatacttttggtatgccttatgttcttttgtattatacatccatatgttatatcagaattatattttagcattgtttttcaattcggtccaatggaaattgatcatgcaatattctctaaacc
caaggtcctattgagtttggagaggtttggattacagaaacataaatatatgattacatgagaacaaaacattgacaaattgtatgtttcataatcttgcagATGATACTATCATGCTACTCCAGCGAAAGTTTTGTTGTAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGCAATTAAACAATAAG
CATATCACAAATGGCTAATTTGAAGCGATGTGCTCATTTGATATGATACGTGACCCTTGAAAA
Intron 3 GTAATCTTTG ... TGAATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 60.75 | 42 | 14 | 65 |
| A2 | 56.3 | 52 | 14 | 67 |
| A3 | 48.31 | 61 | 16 | 57 |
| A4 | 43.75 | 36 | 20 | 28 |
| A5 | 38.64 | 27 | 12 | 17 |
| A6 | 49.43 | 311 | 52 | 304 |
| A7 | 49.19 | 439 | 124 | 425 |
| A8 | 52.22 | 602 | 123 | 658 |
| A9 | 50.98 | 476 | 126 | 495 |
| A10 | 46.96 | 314 | 101 | 278 |
>TRINITY_DN44476_c0_g1_i2 from sample A8 / Example spliced isoformTTTCAGTTGTGATTGAAAATTTCTGCCGGTATTTAATCAGGGACGCATTTATGGTAATGTTATGGGGATTCCATAACTCATTCACACTGGGTTTCTATGTGCAGTGCAGTGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCACTGCATTGTAACTGCGTTCAAACACGCATCATTTAATTGAGGCCATC
GTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTCTACGCTCGAATGCATTGGGTTGCTCACATTTTATCTGTTATGTTCGAATTGGGTCTGTGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAATTTGAGGTAAAGCAGTTTCCTCTGCAATTGGTTGCCCATA
TCTTGACATGTGGGTTGAGGTTAAAAAACAGGAGGGAATGAAGAAAGTGAGAGAGGGGTTATATATTGGCAATTTCTTTGACATGTGCATGGTTTTGGGAGATGACTCAAGACTCCAGGTGAAAATTACACATGTATTGTCTCTTCTTACCACAAATTTCTTACATACGTCTTTTGATGGGAAAAGGCAGTTGGGTTCAT
CACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGGGCGGTGTTTCAGGATCAGAGATCGAAACGGGGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTTGGAGGCTTGCCTCGACTTC
ATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTGCAGCAGTGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAAGATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAAGGGCTTCATGGAGCAGCTCCAAATGTTCGAGGAAAT
GGGTTATAAGATTGATCCTATGCATCCCGTGTACAAAAGTTTCAAAGCATCAAGGACATGATACTATCATGCTACTCCAGCGAAAGTTTTGTTGTAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGCAATTAAACAATAAGCATATCACAAATGGCTAATTTGAAGCGATGTGCTCATTTGATATG
ATACGTGACCCTTGAAAACTTGAATATTAAAATCTCTGAAATTCAAGCATTGATTAACTTGCATTCTATCCTTTGATGGGTTTGTGATCATTGAATTTTCTCTATCATGTTTTGTAGTATGCTGTCATCAAAATCATTTTTTTGTTGACTTGATATTTTATGATCTGTTAACTATTCTATGATTTTCTTGCATCAGGTTT
GTATTATCCTCTCATCCTTTTAGAAATCTGAACTCTTTTTATCTGTTGAAATCTGTTGCATTTTGTATGATTCTACTAGTTTTACTCGCTATTATCTACGAGTGATCATTTTAATGTTCAACAACAATGATGGGAGTTTGTTTGGCTTTTAAGATAATGACTTCGACATTTACAAGATAAGACAGAGTGTGACGTGCTGA
AAACCTGGAATAGTTTAGGTTATTTATCCTGCATGTTTTTGCTATCACCATGCCACTGTTTCTGATGTCTCTAATGTCTAGCCCACAGGGACAACTTCTTGTGGGTACCCTCTGAAACATGATGGAACTTGGGAGACAACCTTGGGTTGAACTTTTACAGTAAGCAAGCATGAATTTACGATCAAACTATTTTATGGAGT
TGTTTACATGTTTGTTAGATTTAGGATTCAGTGGTATATTTGCTACTTGGCTATTTTCCGTTTTCCAGGGAATGAAAGATGGTAAGAAAACAACAAATTATGCATACAAACGGGTGATTGCATGTATTGCTTGTAATGGCTCATTAGCACATGTG
>TRINITY_DN44476_c0_g1_i7 from sample A8 / Example unspliced isoform:TTGAATTCGGTGTGAATTTGAGGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGAGCAGTGTTTCAGGATCAGAGATCGAAACGGGGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAA
AACCTCTTGGATCGGTTGGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTGCAGCAGTGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAAGATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAA
GGGCTTCATGGAGCAGCTCCAAATGTTCGAGGAAATGGGTTATAAGATTGATCCTATGCATCCCGTGTACAAAAGTTTCAAAGCATCAAGGACgtaatctttgtgtggaacaagtccattggggaatctcttagttgactccatagcccaaaggaaagatgcctggagggacattagatgcaaacttaactgccactcaa
atttccgaaagaacagaccatttcaagtaatcatgtgaatttcagATGATACTATCATGCTACTCCAGCGAAAGTTTTGTTGTAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGCAATTAAACAATAAGCATATCACAAATGGCTAATTTGAAGCGATGTGCTCATTTGATATGATACGTGACCCT
TGAAAACTTGAATATTAAAATCTCTGAAATTCAAGCATTGATTAACTTGCATTCTATCCTTTGATGGGTTTGTGATCATTGAATTTTCTCTATCATGTTTTGTAGTATGCTGTCATCAAAATCATTTTTTTGTTGACTTGATATTTTATGATCTGTTAACTATTCTATGATTTTCTTGCATCAGGTTTGTATTATCCTCT
CATCCTTTTAGAAATCTGAACTCTTTTTATCTGTTGAAATCTGTTGCATTTTGTATGATTCTACTAGTTTTACTCGCTATTATCTACGAGTGATCATTTTAATGTTCAACAACAATGATGGGAGTTTGTTTGGCTTTTAAGATAATGACTTCGACATTTACAAGATAAGACAGAGTGTGACGTGCTGAAAACCTGGAATA
GTTTAGGTTATTTATCCTGCATGTTTTTGCTATCACCATGCCACTGTTTCTGATGTCTCTAATGTCTAGCCCACAGGGACAACTTCTTGTGGGTACCCTCTGAAACATGATGGAACTTGGGAGACAACCTTGGGTTGAACTTTTACAGTAAGCAAGCATGAATTTACGATCAAACTATTTTATGGAGTTGTTTACATGTT
TGTTAGATTTAGGATTCAGTGGTATATTTGCTACTTGGCTATTTTCCGTTTTCCAGGGAATGAAAGATGGTAAGAAAACAACAAATTATGCATACAAACGGGTGATTGCATGTATTGCTTGTAATGGCTCATTAGCACATGTG
Intron 4 GTTTGTCTTA ... ATGCCTTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 32.6 | 128.7 | 62 | 0 |
| A2 | 34.06 | 101 | 52 | 0 |
| A3 | 30.02 | 98.3 | 42 | 3 |
| A4 | 28.89 | 87 | 35 | 5 |
| A5 | 25 | 42 | 14 | 0 |
| A6 | 24.61 | 295.7 | 96 | 0 |
| A7 | 25.28 | 567.3 | 191 | 0 |
| A8 | 23.4 | 572 | 173 | 0 |
| A9 | 24.07 | 523 | 164 | 0 |
| A10 | 22.67 | 387.3 | 113 | 0 |
>TRINITY_DN102550_c0_g1_i1 from sample A4 / Example spliced isoformCCATAACTCATTCACACTGGGTTTCTATGTGCAGTGCAGTGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCACTGCATTGTAACTGCGTTCAAACACGCATCATTTAATTGAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTCTACGCTCGAATGCATTGGGTT
GCTCACATTTTATCTGTTATGTTCGAATTGGGTCTGTGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAATTTGAGGTAAAGCAGTTTCCTTTGCAATTGGTTGCCCATATCTTGACATGTGGGTTGAGGTTAAAAAACAGGAGGGAATGAAGAAAGTGAGAGAGGGGTTATATATTGGC
AATTTCTTTGACATGTGCATGGTTTTGGGAGATGACTCAAGACTCCAGGTGAAAATTACACATGTATTGTCTCTTCTTACCACAAATTTCTTACATACGTCTTTTGATGGGAAAAGGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGGGCGGTGTTTCAGGATC
AGAGATCGAAACGGGGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTTGGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTGCAGCAG
TGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAAGATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAAGGGCTTCATGGAGCAGCTCCAAATGTTCGAGGAAATGGGTTATAAGATTGATCCTATGCATCCCGTGTACAAAAGTTTCAAAGCATCAAGAACATGATACTATCAT
GCTACTCCAGCGAAAGTTTTGTTGTAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGTAATTAAACAATAAGCATATCACAAATGGCTGATTTGAAGCGATGTGCTCATTTGATATGATACGTGACCCTTGAAAATGAAAACTTGAATATTAAAATCTCTGAAATTCAAGCG
>TRINITY_DN102550_c0_g1_i2 from sample A4 / Example unspliced isoform:CCATAACTCATTCACACTGGGTTTCTATGTGCAGTGCAGTGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCACTGCATTGTAACTGCGTTCAAACACGCATCATTTAATTGAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTCTACGCTCGAATGCATTGGGTT
GCTCACATTTTATCTGTTATGTTCGAATTGGGTCTGTGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAATTTGAGGTAAAGCAGTTTCCTTTGCAATTGGTTGCCCATATCTTGACATGTGGGTTGAGGTTAAAAAACAGGAGGGAATGAAGAAAGTGAGAGAGGGGTTATATATTGGC
AATTTCTTTGACATGTGCATGGTTTTGGGAGATGACTCAAGACTCCAGGTGAAAATTACACATGTATTGTCTCTTCTTACCACAAATTTCTTACATACGTCTTTTGATGGGAAAAGGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGGGCGGTGTTTCAGGATC
AGAGATCGAAACGGGGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTTGGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTGCAGCAG
TGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAAGATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAAGGGCTTCATGGAGCAGgtttgtcttatttattcttacaatacttatctttcccattggtgttggagattaaaattaagatatgcaatcactatagataaattagtt
ctaacattaatatttgctttcctctatgcctttagCTCCAAATGTTCGAGGAAATG
Intron 5 GTAAAGCAGT ... ATGGGAAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 81.83 | 40 | 146 | 206 |
| A2 | 78.25 | 51.9 | 157 | 207 |
| A3 | 69.73 | 84 | 143 | 238 |
| A4 | 71.84 | 77.2 | 158 | 227 |
| A5 | 70.84 | 45.5 | 83 | 129 |
| A6 | 73.32 | 135.5 | 257 | 474 |
| A7 | 79.26 | 208.6 | 506 | 1068.2 |
| A8 | 76.95 | 172.5 | 371 | 765 |
| A9 | 75.12 | 255.7 | 529 | 985 |
| A10 | 75.57 | 209.3 | 474.2 | 800 |
>TRINITY_DN106809_c0_g2_i2 from sample A5 / Example spliced isoformCCATAACTTAACATTCACACTGGGTTTCTATGTGCAGTGCAGTGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCGTCAATGCATTGTAACTGCGTTCAAACACGCATCATTAAATTGAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTGTACGCTCGAATGCAT
TGGGTTGCTCACATTTTATCTGTTATGTTCGAATTGGGTCTGTGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAATTTGAGGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGAGCAGTGTTTCAGGATCAGAGATCGAAACGG
GGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTTGGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTGCAGCAGTGATAGTGGCATAT
TTGATGAAGACTGAGAGGCTATCTGTCAAAGATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAAGGGCTTCATGGAGCAGCTCCAAATGTTCGAGGAAATGGGTTATAAGATTGATCCTATGCATCCTGTGTACAAAAGTTTCAAAGCATCAAGAACATGATACTATCATGCTACTCCAGCGAA
AGTTTTGTTGTAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGTAATTAAACAATAAGCATATCACAAATGGCTGATTTGAAGCGATGTGCTCATTTGATATGATACGTGACCCTTGAAAACTTGAATATTAAAATCTCTGAAATTCAAGCATTGATTAACTTGCATTCTATCCTTTGATGGGTTTG
TGATCATTGAATTTTCTCTATCATGTTTTGTAGTATGCTGTCATCAAAATCATTTTTTTGTTGACTTGATATTTTATGATCTGTTAACTATTCTATGATTTTCTTGCATCAGGTTTGTATTATCCTCTCATCCTTTTAGAAATCTGAACTCT
>TRINITY_DN106809_c0_g2_i3 from sample A5 / Example unspliced isoform:CCATAACTTAACATTCACACTGGGTTTCTATGTGCAGTGCAGTGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCGTCAATGCATTGTAACTGCGTTCAAACACGCATCATTAAATTGAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTGTACGCTCGAATGCAT
TGGGTTGCTCACATTTTATCTGTTATGTTCGAATTGGGTCTGTGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAATTTGAGgtaaagcagtttcctctgcaattggttgcccatatcttgacatgtgggttgaggttaaaaaacaggagggaatgaagaaagtgagagaggggttatat
attggcaatttctttgacatgtgcatggttttgggagatgactcaagactccaggtgaaaattacacatgtattgtctcttcttaccacaaatttcttacatacgtcttttgatgggaaaagGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGAGCAGTGTTTC
AGGATCAGAGATCGAAACGGGGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTTGGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTG
CAGCAGTGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAAGATGCCTTGAGTTCTTTACGTAAGGCGAGTTCCAAAGTCTGTCCAAATAAGGGCTTCATGGAGCAGCTCCAAATGTTCGAGGAAATGGGTTATAAGATTGATCCTATGCATCCTGTGTACAAAAGTTTCAAAGCATCAAGGACATGCCTG
GAGGGACATTAGATGCAAACTTAACTGCCACTCAAATTTCCGAAAGAACAGACCATTTCAAGTAATCATGTGAATTTCAGATGATACTATCATGCTACTCCAGCGAAAGTTTTGTTGTAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGTAATTAAACAATAAGCATATCACAAATGGCTGATTTG
AAGCGATGTGCTCATTTGATATGATACGTGACCCTTGAAAACTTGAATATTAAAATCTCTGAAATTCAAGCATTGATTAACTTGCATTCTATCCTTTGATGGGTTTGTGATCATTGAATTTTCTCTATCATGTTTTGTAGTATGCTGTCATCAAAATCATTTTTTTGTTGACTTGATATTTTATGATCTGTTAACTATTC
TATGATTTTCTTGCATCAGGTTTGTATTATCCTCTCATCCTTTTAGAAATCTGAACTCT
Intron 6 ATGCCTTGAG ... CATCAAGAAC
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 72.65 | 47 | 142.2 | 108.2 |
| A2 | 76.05 | 32.3 | 130 | 76.5 |
| A3 | 73.52 | 36 | 118.7 | 82.8 |
| A4 | 79.54 | 21 | 89.7 | 74.5 |
| A5 | 74.4 | 12 | 44.7 | 25.5 |
| A6 | 73.98 | 101.3 | 323.5 | 255.3 |
| A7 | 75.08 | 186.3 | 626.5 | 501.5 |
| A8 | 70.11 | 253.7 | 597.3 | 599.2 |
| A9 | 73.86 | 196 | 555 | 558.3 |
| A10 | 75.29 | 124.7 | 400.5 | 362.7 |
>TRINITY_DN43976_c0_g2_i8 from sample A6 / Example spliced isoformGAAAAAAAGTAGTTAGCGAGAGAAGCTCAAGTTGGTATTTTTCAGTTGTGATTGAAAATTTCTGCCGGTATTTAATCAGGGACGCATTTATGGTAATGTTATGGGGATTCCATAACTCATTCACACTGGGTTTCTATGTGCAGTGCAGTGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCACTGCATTG
TAACTGCGTTCAAACACGCATCATTTAATTGAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTCTACGCTCGAATGCATTGGGTTGCTCACATTTTATCTGTTATGTTCGAATTGGGTCTGTGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAAT
TTGAGGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGAGCAGTGTTTCAGGATCAGAGATCGAAACGGGGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTT
GGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTGCAGCAGTGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAAGATGCCTGGAGGGACATTAGATGCAAACTTAACTGTCACTCAAATTTCCGAAAGAACAGACCATTTC
AAGTAATCATGTGAATTTCAGATGATACTATCATGCTACTCCAGCGAAAGTTTTGTTGTAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGCAATTAAACAATAAGCATATCACAAATGGCTAATTTGAAGCGATGTGCTCATTTGATATGATACGTGACCCTTGAAAACTTGAATATTAAAATCTC
TGAAATTCAAGCATTGATTAACTTGCATTCTATCCTTTGATGGGTTTGTGATCATTGAATTTTCTCTATCATGTTTTGTAGTATGCTGTCATCAAAATCATTTTTTTGTTGACTTGATATTTTATGATCTGTTAACTATTCTATGATTTTCTTGCATCAGGTTTGTATTATCCTCTCATCCTTTTAGAAATCTGAACTCT
TTTTATCTGTTGAAATCTGTTGCATTTTGTATGATTCTACTAGTTTTACTCGCTATTATCTACGAGTGATCATTTTAATGTTCAACAACAATGATGGGAGTTTGTTTGACTTTTAAGATAATGACTTTGACATTTACAAGATAAGACAGAGTGTGACGTGCTGAAAACCTGGAATAGTTTAGGTTATTTATCCTGCATGT
TTTTGCTATCACCATGCCACTGTTTCTGATGTCTCTAATGTCTAGCCCACAGGGACAACTTCTTGTGGGTACCCTCTGAAACATGATGGAACTTGGGAGACAACCTTGGGTTGAACTTTTACAGTAAGCAAGCTTGAATTTACCATCAAACT
>TRINITY_DN43976_c0_g2_i4 from sample A6 / Example unspliced isoform:GAAAAAAAGTAGTTAGCGAGAGAAGCTCAAGTTGGTATTTTTCAGTTGTGATTGAAAATTTCTGCCGGTATTTAATCAGGGACGCATTTATGGTAATGTTATGGGGATTCCATAACTCATTCACACTGGGTTTCTATGTGCAGTGCAGTGTAACTGCGCTGAGACAGGTTGTTATGTTGGTTTTCTCCGTCACTGCATTG
TAACTGCGTTCAAACACGCATCATTTAATTGAGGCCATCGTTTAAACCTGCTTTGTTTGGACTGCTCTGTCAACTGAGGTTAAAACTCTACGCTCGAATGCATTGGGTTGCTCACATTTTATCTGTTATGTTCGAATTGGGTCTGTGAATTGAATATCAAAACCGTTGTTCGACGCATTTTGATTGAATTCGGTGTGAAT
TTGAGGCAGTTGGGTTCATCACGTTCGAGAAATCATTCGGAAGGCGATCTGGTACGAAACTCCAGGAGTGAGAGCAGTGTTTCAGGATCAGAGATCGAAACGGGGGATTGCTCCGTGGAAATTACAGGCAGGAGTTCGCAAATCACTAGAATGAAGGTCCCTTTTATTGACGATCCAACAGAAAACCTCTTGGATCGGTT
GGAGGCTTGCCTCGACTTCATTGATAAAGCTAGAGAACGAGGAACCATCTTGGTACATTGCATGGCTGGAGTTTCTAGAAGTGCAGCAGTGATAGTGGCATATTTGATGAAGACTGAGAGGCTATCTGTCAAAGatgccttgagttctttacgtaaggcgagttccaaagtctgtccaaataagggcttcatggagcagc
tccaaatgttcgaggaaatgggttataagattgatcctatgcatcccgtgtacaaaagtttcaaagcatcaaggacATGCCTGGAGGGACATTAGATGCAAACTTAACTGTCACTCAAATTTCCGAAAGAACAGACCATTTCAAGTAATCATGTGAATTTCAGATGATACTATCATGCTACTCCAGCGAAAGTTTTGTTG
TAACTTCGCATACATGATACTTATTTGAAATTAAGAAGCAAGTTTGCAATTAAACAATAAGCATATCACAAATGGCTAATTTGAAGCGATGTGCTCATTTGATATGATACGTGACCCTTGAAAACTTGAATATTAAAATCTCTGAAATTCAAGCATTGATTAACTTGCATTCTATCCTTTGATGGGTTTGTGATCATTGA
ATTTTCTCTATCATGTTTTGTAGTATGCTGTCATCAAAATCATTTTTTTGTTGACTTGATATTTTATGATCTGTTAACTATTCTATGATTTTCTTGCATCAGGTTTGTATTATCCTCTCATCCTTTTAGAAATCTGAACTCTTTTTATCTGTTGAAATCTGTTGCATTTTGTATGATTCTACTAGTTTTACTCGCTATTA
TCTACGAGTGATCATTTTAATGTTCAACAACAATGATGGGAGTTTGTTTGACTTTTAAGATAATGACTTTGACATTTACAAGATAAGACAGAGTGTGACGTGCTGAAAACCTGGAATAGTTTAGGTTATTTATCCTGCATGTTTTTGCTATCACCATGCCACTGTTTCTGATGTCTCTAATGTCTAGCCCACAGGGACAA
CTTCTTGTGGGTACCCTCTGAAACATGATGGAACTTGGGAGACAACCTTGGGTTGAACTTTTACAGTAAGCAAGCTTGAATTTACCATCAAACT